View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF15363_high_3 (Length: 571)

Name: NF15363_high_3
Description: NF15363
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF15363_high_3
NF15363_high_3
[»] chr4 (11 HSPs)
chr4 (19-491)||(33759197-33759669)
chr4 (251-292)||(30848643-30848684)
chr4 (254-292)||(18508871-18508909)
chr4 (264-320)||(2734168-2734225)
chr4 (252-309)||(12276820-12276878)
chr4 (260-309)||(23151590-23151640)
chr4 (251-292)||(24980676-24980717)
chr4 (264-308)||(40391257-40391302)
chr4 (251-292)||(54235273-54235314)
chr4 (251-311)||(55827292-55827353)
chr4 (252-292)||(3249703-3249743)
[»] chr5 (11 HSPs)
chr5 (346-484)||(11598017-11598155)
chr5 (251-304)||(968333-968387)
chr5 (252-309)||(34252717-34252775)
chr5 (252-303)||(19644450-19644502)
chr5 (252-284)||(23344907-23344939)
chr5 (252-311)||(20219495-20219554)
chr5 (252-309)||(9956550-9956608)
chr5 (251-292)||(39030581-39030622)
chr5 (264-304)||(42324944-42324985)
chr5 (255-291)||(14611071-14611107)
chr5 (252-292)||(16500575-16500615)
[»] chr2 (11 HSPs)
chr2 (252-319)||(44726834-44726902)
chr2 (252-307)||(16180487-16180543)
chr2 (251-309)||(17437177-17437236)
chr2 (252-309)||(2884256-2884314)
chr2 (251-307)||(10459268-10459325)
chr2 (251-309)||(31469071-31469130)
chr2 (251-309)||(33829389-33829448)
chr2 (251-303)||(5713276-5713329)
chr2 (251-292)||(11386327-11386368)
chr2 (264-304)||(30517918-30517959)
chr2 (251-292)||(41912128-41912169)
[»] chr7 (8 HSPs)
chr7 (251-303)||(23971236-23971288)
chr7 (251-308)||(6803308-6803366)
chr7 (251-309)||(47967913-47967972)
chr7 (252-309)||(18732042-18732099)
chr7 (251-308)||(5026141-5026199)
chr7 (251-292)||(16866452-16866493)
chr7 (251-303)||(30794447-30794500)
chr7 (251-292)||(44816485-44816526)
[»] chr1 (7 HSPs)
chr1 (251-305)||(3694038-3694093)
chr1 (264-306)||(35310316-35310359)
chr1 (251-303)||(19758322-19758375)
chr1 (251-292)||(47543617-47543658)
chr1 (251-309)||(3739865-3739924)
chr1 (251-309)||(30693335-30693394)
chr1 (251-287)||(10498377-10498413)
[»] scaffold2113 (1 HSPs)
scaffold2113 (251-307)||(627-684)
[»] chr6 (12 HSPs)
chr6 (251-311)||(31522659-31522719)
chr6 (251-309)||(8437825-8437884)
chr6 (251-309)||(9829891-9829950)
chr6 (252-309)||(1986204-1986262)
chr6 (255-292)||(2282416-2282453)
chr6 (251-292)||(31323832-31323873)
chr6 (254-304)||(28596080-28596131)
chr6 (251-309)||(35003759-35003818)
chr6 (253-309)||(7343294-7343351)
chr6 (252-308)||(14446697-14446754)
chr6 (252-304)||(24640142-24640195)
chr6 (251-307)||(28004674-28004731)
[»] chr8 (5 HSPs)
chr8 (251-292)||(15114635-15114676)
chr8 (251-299)||(11196268-11196316)
chr8 (252-303)||(44080727-44080779)
chr8 (251-308)||(33557826-33557884)
chr8 (251-292)||(13209982-13210023)
[»] chr3 (9 HSPs)
chr3 (251-292)||(3956176-3956217)
chr3 (251-292)||(26104236-26104277)
chr3 (251-303)||(31280161-31280214)
chr3 (251-322)||(47783065-47783137)
chr3 (251-292)||(32221521-32221562)
chr3 (251-292)||(40955796-40955837)
chr3 (252-292)||(26914501-26914541)
chr3 (252-292)||(40905820-40905860)
chr3 (264-311)||(46829106-46829154)


Alignment Details
Target: chr4 (Bit Score: 444; Significance: 0; HSPs: 11)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 444; E-Value: 0
Query Start/End: Original strand, 19 - 491
Target Start/End: Original strand, 33759197 - 33759669
Alignment:
Q  19 gtgggtttgtctgtgaaatctatttttagttatagttggtctaaaaaattcatcacacaatttctttatcgtgtgtgaccagtgttcataccaatacttg 118  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33759197 gtgggtttgtctgtgaaatctatttttagttatagttggtctaaaaaattcatcacacaatttctttatcgtgtgtgaccagtgttcataccaatacttg 33759296  T
Q  119 tatccgtcttcacatttattttattgcgttaatgcatgtaacttatgaacaatgtatcttttctaatgaaattttggttttaattgataagtataaatgt 218  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33759297 tatccgtcttcacatttattttattgcgttaatgcatgtaacttatgaacaatgtatcttttctaatgaaattttggttttaattgataagtataaatgt 33759396  T
Q  219 tagtgactttctagttgtaacaaaccataagtcaaattttgaactaaatacattaatttttgttgaccaattttacttatattttgggacgaaatgagta 318  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33759397 tagtgactttctagttgtaacaaaccataagtcaaattttgaactaaatacattaatttttgttgaccaattttacttatattttgggacgaaatgagta 33759496  T
Q  319 cactcaagcaaactaannnnnnnaatcttttcaaaatatggttaccagctggtgtgcccgttgatgataagcattaggctccgtttttcccaattactca 418  Q
    ||||||||||||||||       ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33759497 cactcaagcaaactaatttttttaatgttttcaaaatatggttaccagctggtgtgcccgttgatgataagcattaggctccgtttttcccaattactca 33759596  T
Q  419 ccatgatattaccactgagattccggttcatgctcagtggctgcaatgttcgtcctttgctagttgtgtatgg 491  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  33759597 ccatgatattaccactgagattccggttcatgctcagtggctgcaatgtttgtcctttgctagttgtgtatgg 33759669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 251 - 292
Target Start/End: Original strand, 30848643 - 30848684
Alignment:
Q  251 caaattttgaactaaatacattaatttttgttgaccaatttt 292  Q
    |||||||||||| |||||||||||||||||||||||||||||    
T  30848643 caaattttgaacaaaatacattaatttttgttgaccaatttt 30848684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 254 - 292
Target Start/End: Original strand, 18508871 - 18508909
Alignment:
Q  254 attttgaactaaatacattaatttttgttgaccaatttt 292  Q
    ||||||||||||||||||||| |||||||||||||||||    
T  18508871 attttgaactaaatacattaacttttgttgaccaatttt 18508909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 264 - 320
Target Start/End: Complemental strand, 2734225 - 2734168
Alignment:
Q  264 aaatacattaatttttgttgaccaatttt-acttatattttgggacgaaatgagtaca 320  Q
    ||||||||||| |||||||||| |||||| ||||||||||||||||| || |||||||    
T  2734225 aaatacattaacttttgttgactaatttttacttatattttgggacggaaggagtaca 2734168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 252 - 309
Target Start/End: Complemental strand, 12276878 - 12276820
Alignment:
Q  252 aaattttgaactaaatacattaatttttgttgaccaat-tttacttatattttgggacg 309  Q
    ||||||||||  ||||||||||| ||||| |||||||| |||||||||||||| |||||    
T  12276878 aaattttgaatcaaatacattaacttttgctgaccaatctttacttatattttaggacg 12276820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 260 - 309
Target Start/End: Original strand, 23151590 - 23151640
Alignment:
Q  260 aactaaatacattaatttttgttgaccaattttac-ttatattttgggacg 309  Q
    ||||||||||||||||||||||||| ||||||| | |||||||||| ||||    
T  23151590 aactaaatacattaatttttgttgatcaatttttctttatattttgagacg 23151640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 251 - 292
Target Start/End: Original strand, 24980676 - 24980717
Alignment:
Q  251 caaattttgaactaaatacattaatttttgttgaccaatttt 292  Q
    ||||||||| || |||||||||||||||||||||| ||||||    
T  24980676 caaattttgtacaaaatacattaatttttgttgacaaatttt 24980717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 264 - 308
Target Start/End: Complemental strand, 40391302 - 40391257
Alignment:
Q  264 aaatacattaatttttgttga-ccaattttacttatattttgggac 308  Q
    ||||||||||||||||||||| | | ||||||||||||||||||||    
T  40391302 aaatacattaatttttgttgatcgatttttacttatattttgggac 40391257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 251 - 292
Target Start/End: Original strand, 54235273 - 54235314
Alignment:
Q  251 caaattttgaactaaatacattaatttttgttgaccaatttt 292  Q
    |||||||||||| ||||||||||| ||||||||| |||||||    
T  54235273 caaattttgaaccaaatacattaacttttgttgagcaatttt 54235314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 251 - 311
Target Start/End: Original strand, 55827292 - 55827353
Alignment:
Q  251 caaattttgaactaaatacattaatttttgttgaccaa-ttttacttatattttgggacgaa 311  Q
    |||| ||| ||| ||||| ||||| ||||||||||||| |||| ||||||||||||||||||    
T  55827292 caaaattttaaccaaatatattaacttttgttgaccaatttttgcttatattttgggacgaa 55827353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 252 - 292
Target Start/End: Complemental strand, 3249743 - 3249703
Alignment:
Q  252 aaattttgaactaaatacattaatttttgttgaccaatttt 292  Q
    ||||||||||| ||||||||||| |||||| ||||||||||    
T  3249743 aaattttgaaccaaatacattaacttttgtcgaccaatttt 3249703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 71; Significance: 7e-32; HSPs: 11)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 346 - 484
Target Start/End: Complemental strand, 11598155 - 11598017
Alignment:
Q  346 ttttcaaaatatggttaccagctggtgtgcccgttgatgataagcattaggctccgtttttcccaattactcaccatgatattaccactgagattccggt 445  Q
    ||||||||||||| ||||||||||||||||| |||||||||||| ||| | |||| ||||||||||| | ||||||||||||| ||| ||||||||| ||    
T  11598155 ttttcaaaatatgcttaccagctggtgtgcctgttgatgataagaattggcctccatttttcccaatcattcaccatgatattgccaatgagattccagt 11598056  T
Q  446 tcatgctcagtggctgcaatgttcgtcctttgctagttg 484  Q
    |||||||||| |  |||||| |||  |||||||||||||    
T  11598055 tcatgctcagagattgcaatattcagcctttgctagttg 11598017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 251 - 304
Target Start/End: Original strand, 968333 - 968387
Alignment:
Q  251 caaattttgaactaaatacattaatttttgttgac-caattttacttatattttg 304  Q
    |||||||||||||||||| |||||||||||||||| || ||||||||||||||||    
T  968333 caaattttgaactaaatatattaatttttgttgactcatttttacttatattttg 968387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 252 - 309
Target Start/End: Complemental strand, 34252775 - 34252717
Alignment:
Q  252 aaattttgaactaaatacattaatttttgttgaccaa-ttttacttatattttgggacg 309  Q
    ||||||||||| ||||||||||| ||||||||||||| |||| |||| |||||||||||    
T  34252775 aaattttgaaccaaatacattaacttttgttgaccaatttttgcttacattttgggacg 34252717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 252 - 303
Target Start/End: Original strand, 19644450 - 19644502
Alignment:
Q  252 aaattttgaactaaatacattaatttttgttgaccaatt-ttacttatatttt 303  Q
    ||||||||||| |||||| |||||||||||||| ||||| |||||||||||||    
T  19644450 aaattttgaaccaaatacgttaatttttgttgatcaattcttacttatatttt 19644502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 252 - 284
Target Start/End: Complemental strand, 23344939 - 23344907
Alignment:
Q  252 aaattttgaactaaatacattaatttttgttga 284  Q
    |||||||||||||||||||||||||||||||||    
T  23344939 aaattttgaactaaatacattaatttttgttga 23344907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 252 - 311
Target Start/End: Complemental strand, 20219554 - 20219495
Alignment:
Q  252 aaattttgaactaaatacattaatttttgttgaccaattttacttatattttgggacgaa 311  Q
    ||||||||||  ||||| ||||| ||||||||| |||||||||||| ||||| |||||||    
T  20219554 aaattttgaatcaaatatattaacttttgttgatcaattttacttacattttaggacgaa 20219495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 252 - 309
Target Start/End: Original strand, 9956550 - 9956608
Alignment:
Q  252 aaattttgaactaaatacattaatttttgttgaccaa-ttttacttatattttgggacg 309  Q
    ||||||||||  ||||||||||| ||||||| ||||| ||||||||| |||||||||||    
T  9956550 aaattttgaatcaaatacattaacttttgttaaccaatttttacttacattttgggacg 9956608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 251 - 292
Target Start/End: Complemental strand, 39030622 - 39030581
Alignment:
Q  251 caaattttgaactaaatacattaatttttgttgaccaatttt 292  Q
    |||||||| ||| ||||||||||| |||||||||||||||||    
T  39030622 caaatttttaaccaaatacattaacttttgttgaccaatttt 39030581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 264 - 304
Target Start/End: Original strand, 42324944 - 42324985
Alignment:
Q  264 aaatacattaatttttgttgaccaa-ttttacttatattttg 304  Q
    ||||||||||| ||||||||||||| ||||||||||||||||    
T  42324944 aaatacattaacttttgttgaccaatttttacttatattttg 42324985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 255 - 291
Target Start/End: Original strand, 14611071 - 14611107
Alignment:
Q  255 ttttgaactaaatacattaatttttgttgaccaattt 291  Q
    ||||||||||||||||| |||||| ||||||||||||    
T  14611071 ttttgaactaaatacataaattttagttgaccaattt 14611107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 252 - 292
Target Start/End: Complemental strand, 16500615 - 16500575
Alignment:
Q  252 aaattttgaactaaatacattaatttttgttgaccaatttt 292  Q
    ||||||||||| || |||||||||||||||||| |||||||    
T  16500615 aaattttgaaccaattacattaatttttgttgaacaatttt 16500575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 45; Significance: 2e-16; HSPs: 11)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 252 - 319
Target Start/End: Original strand, 44726834 - 44726902
Alignment:
Q  252 aaattttgaactaaatacattaatttttgttgaccaa-ttttacttatattttgggacgaaatgagtac 319  Q
    ||||||| ||||||||||||||||||||||||| ||| |||| |||||||||| |||||||||||||||    
T  44726834 aaattttaaactaaatacattaatttttgttgatcaattttttcttatatttttggacgaaatgagtac 44726902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 252 - 307
Target Start/End: Original strand, 16180487 - 16180543
Alignment:
Q  252 aaattttgaactaaatacattaatttttgttgacc-aattttacttatattttggga 307  Q
    ||||||||||| ||||||||||| ||||||||||| |||||||||||||||||||||    
T  16180487 aaattttgaaccaaatacattaacttttgttgaccaaattttacttatattttggga 16180543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 251 - 309
Target Start/End: Original strand, 17437177 - 17437236
Alignment:
Q  251 caaattttgaactaaatacattaatttttgttgaccaa-ttttacttatattttgggacg 309  Q
    ||||||||||||||||||||||||||||||||||| || ||||  |||||||||||||||    
T  17437177 caaattttgaactaaatacattaatttttgttgacaaatttttgtttatattttgggacg 17437236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 252 - 309
Target Start/End: Complemental strand, 2884314 - 2884256
Alignment:
Q  252 aaattttgaactaaatacattaatttttgttgaccaa-ttttacttatattttgggacg 309  Q
    ||||||||||| |||||||||||||||||||||| || ||||||||||||||| |||||    
T  2884314 aaattttgaaccaaatacattaatttttgttgacaaatttttacttatattttaggacg 2884256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 251 - 307
Target Start/End: Complemental strand, 10459325 - 10459268
Alignment:
Q  251 caaattttgaactaaatacattaatttttgttgaccaa-ttttacttatattttggga 307  Q
    |||||||||||| ||||||||||| ||||||||||||| |||| ||||||||||||||    
T  10459325 caaattttgaaccaaatacattaacttttgttgaccaatttttgcttatattttggga 10459268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 251 - 309
Target Start/End: Complemental strand, 31469130 - 31469071
Alignment:
Q  251 caaattttgaactaaatacattaatttttgttgaccaa-ttttacttatattttgggacg 309  Q
    |||||||| ||| ||||||||||| ||||||||||||| |||| ||||||||||||||||    
T  31469130 caaatttttaaccaaatacattaacttttgttgaccaatttttgcttatattttgggacg 31469071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 251 - 309
Target Start/End: Complemental strand, 33829448 - 33829389
Alignment:
Q  251 caaattttgaactaaatacattaatttttgttgaccaa-ttttacttatattttgggacg 309  Q
    ||||||||| || ||||| ||||||||||||||||||| ||||  |||||||||||||||    
T  33829448 caaattttgtaccaaatatattaatttttgttgaccaatttttgtttatattttgggacg 33829389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 251 - 303
Target Start/End: Original strand, 5713276 - 5713329
Alignment:
Q  251 caaattttgaactaaatacattaatttttgttgacc-aattttacttatatttt 303  Q
    ||||||||||| ||||||| |||||||| ||||||| ||||||| |||||||||    
T  5713276 caaattttgaattaaatacgttaattttggttgaccaaattttatttatatttt 5713329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 251 - 292
Target Start/End: Complemental strand, 11386368 - 11386327
Alignment:
Q  251 caaattttgaactaaatacattaatttttgttgaccaatttt 292  Q
    ||||||||||| |||||| ||||||||||||||| |||||||    
T  11386368 caaattttgaattaaatatattaatttttgttgatcaatttt 11386327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 264 - 304
Target Start/End: Original strand, 30517918 - 30517959
Alignment:
Q  264 aaatacattaatttttgttgaccaa-ttttacttatattttg 304  Q
    |||||||||||||||||||||| || ||||||||||||||||    
T  30517918 aaatacattaatttttgttgacaaatttttacttatattttg 30517959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 251 - 292
Target Start/End: Original strand, 41912128 - 41912169
Alignment:
Q  251 caaattttgaactaaatacattaatttttgttgaccaatttt 292  Q
    |||||||||||| | ||||||||||||||||||| |||||||    
T  41912128 caaattttgaaccagatacattaatttttgttgaacaatttt 41912169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 41; Significance: 0.00000000000006; HSPs: 8)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 251 - 303
Target Start/End: Original strand, 23971236 - 23971288
Alignment:
Q  251 caaattttgaactaaatacattaatttttgttgaccaattttacttatatttt 303  Q
    |||||||||||||||||| ||| ||||||||||||||||||| ||||||||||    
T  23971236 caaattttgaactaaatatatttatttttgttgaccaatttttcttatatttt 23971288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 251 - 308
Target Start/End: Complemental strand, 6803366 - 6803308
Alignment:
Q  251 caaattttgaactaaatacattaatttttgttgacc-aattttacttatattttgggac 308  Q
    |||||||| ||||||||||||||| ||||||||||| |||||| |||||||||||||||    
T  6803366 caaattttaaactaaatacattaacttttgttgaccaaattttgcttatattttgggac 6803308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 251 - 309
Target Start/End: Complemental strand, 47967972 - 47967913
Alignment:
Q  251 caaattttgaactaaatacattaatttttgttgacc-aattttacttatattttgggacg 309  Q
    |||||||| |||||||||||| |||||||||||||| ||||||  |||||||||||||||    
T  47967972 caaattttaaactaaatacataaatttttgttgaccgaattttgtttatattttgggacg 47967913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 252 - 309
Target Start/End: Original strand, 18732042 - 18732099
Alignment:
Q  252 aaattttgaactaaatacattaatttttgttgaccaattttacttatattttgggacg 309  Q
    ||||||||||| ||||||||||| |||| |||||||||||| |||| ||||| |||||    
T  18732042 aaattttgaaccaaatacattaacttttattgaccaatttttcttacattttaggacg 18732099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 251 - 308
Target Start/End: Complemental strand, 5026199 - 5026141
Alignment:
Q  251 caaattttgaactaaatacattaatttttgttgaccaatttta-cttatattttgggac 308  Q
    ||||||||| |||||||| ||||| ||||||| |||||||||  |||||||||||||||    
T  5026199 caaattttggactaaatatattaacttttgttaaccaatttttgcttatattttgggac 5026141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 251 - 292
Target Start/End: Original strand, 16866452 - 16866493
Alignment:
Q  251 caaattttgaactaaatacattaatttttgttgaccaatttt 292  Q
    |||||||| ||| ||||||||||| |||||||||||||||||    
T  16866452 caaatttttaaccaaatacattaacttttgttgaccaatttt 16866493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 251 - 303
Target Start/End: Complemental strand, 30794500 - 30794447
Alignment:
Q  251 caaattttgaactaaatacattaatttttgttgacc-aattttacttatatttt 303  Q
    |||||||||||  ||||| ||||| ||||||||||| |||||||||||||||||    
T  30794500 caaattttgaatcaaatatattaaattttgttgaccaaattttacttatatttt 30794447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 251 - 292
Target Start/End: Complemental strand, 44816526 - 44816485
Alignment:
Q  251 caaattttgaactaaatacattaatttttgttgaccaatttt 292  Q
    |||||||||||| ||||||||||| |||||||| ||||||||    
T  44816526 caaattttgaaccaaatacattaacttttgttggccaatttt 44816485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 7)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 251 - 305
Target Start/End: Original strand, 3694038 - 3694093
Alignment:
Q  251 caaattttgaactaaatacattaatttttgttgaccaattt-tacttatattttgg 305  Q
    |||||||||||  |||||||||||||||||||||||||||| ||||||||||||||    
T  3694038 caaattttgaatcaaatacattaatttttgttgaccaatttctacttatattttgg 3694093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 264 - 306
Target Start/End: Original strand, 35310316 - 35310359
Alignment:
Q  264 aaatacattaatttttgttgaccaa-ttttacttatattttggg 306  Q
    ||||||||||||||||||||||||| ||||||||||||||||||    
T  35310316 aaatacattaatttttgttgaccaatttttacttatattttggg 35310359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 251 - 303
Target Start/End: Original strand, 19758322 - 19758375
Alignment:
Q  251 caaattttgaactaaatacattaatttttgttgaccaa-ttttacttatatttt 303  Q
    |||||| | ||||||||||||||| ||||||||||||| |||||||||||||||    
T  19758322 caaattataaactaaatacattaacttttgttgaccaatttttacttatatttt 19758375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 251 - 292
Target Start/End: Complemental strand, 47543658 - 47543617
Alignment:
Q  251 caaattttgaactaaatacattaatttttgttgaccaatttt 292  Q
    |||||||||||| |||| ||||||||||||||||||||||||    
T  47543658 caaattttgaaccaaattcattaatttttgttgaccaatttt 47543617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 251 - 309
Target Start/End: Original strand, 3739865 - 3739924
Alignment:
Q  251 caaattttgaactaaatacattaatttttgttgaccaa-ttttacttatattttgggacg 309  Q
    |||||||| ||| ||||||||||| ||||||||||||| |||| |||||||||| |||||    
T  3739865 caaatttttaaccaaatacattaacttttgttgaccaatttttgcttatattttaggacg 3739924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 251 - 309
Target Start/End: Complemental strand, 30693394 - 30693335
Alignment:
Q  251 caaattttgaactaaatacattaatttttgttgaccaa-ttttacttatattttgggacg 309  Q
    |||||||||||  ||||||||||||||||||||| ||| ||||| ||||||||| |||||    
T  30693394 caaattttgaatcaaatacattaatttttgttgatcaatttttatttatattttcggacg 30693335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 251 - 287
Target Start/End: Original strand, 10498377 - 10498413
Alignment:
Q  251 caaattttgaactaaatacattaatttttgttgacca 287  Q
    |||||||| ||||||||| ||||||||||||||||||    
T  10498377 caaattttaaactaaatatattaatttttgttgacca 10498413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2113 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold2113
Description:

Target: scaffold2113; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 251 - 307
Target Start/End: Original strand, 627 - 684
Alignment:
Q  251 caaattttgaactaaatacattaatttttgttgaccaatttt-acttatattttggga 307  Q
    |||||||||||||||||||| ||| |||||||||| |||||| |||||||||||||||    
T  627 caaattttgaactaaatacaataacttttgttgactaattttcacttatattttggga 684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 37; Significance: 0.00000000001; HSPs: 12)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 251 - 311
Target Start/End: Original strand, 31522659 - 31522719
Alignment:
Q  251 caaattttgaactaaatacattaatttttgttgaccaattttacttatattttgggacgaa 311  Q
    |||||||||||  |||| |||||| ||||||||||||||||| |||| |||||||||||||    
T  31522659 caaattttgaatcaaatgcattaacttttgttgaccaattttgcttacattttgggacgaa 31522719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 251 - 309
Target Start/End: Original strand, 8437825 - 8437884
Alignment:
Q  251 caaattttgaactaaatacattaatttttgttgac-caattttacttatattttgggacg 309  Q
    |||||||||||  ||||||||||||||||||||||  |||||||||||||||||| ||||    
T  8437825 caaattttgaatcaaatacattaatttttgttgactaaattttacttatattttgagacg 8437884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 251 - 309
Target Start/End: Complemental strand, 9829950 - 9829891
Alignment:
Q  251 caaattttgaactaaatacattaatttttgttgaccaa-ttttacttatattttgggacg 309  Q
    |||||||| ||| |||||||||||||||||||||| || |||||||||||||| ||||||    
T  9829950 caaattttaaacaaaatacattaatttttgttgactaatttttacttatatttagggacg 9829891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 252 - 309
Target Start/End: Complemental strand, 1986262 - 1986204
Alignment:
Q  252 aaattttgaactaaatacattaatttttgttgaccaa-ttttacttatattttgggacg 309  Q
    ||||||| |||||||| ||||||||||| |||||||| ||||||||||||||| |||||    
T  1986262 aaattttaaactaaatgcattaatttttattgaccaacttttacttatattttaggacg 1986204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 255 - 292
Target Start/End: Complemental strand, 2282453 - 2282416
Alignment:
Q  255 ttttgaactaaatacattaatttttgttgaccaatttt 292  Q
    |||||||||||||||||||| |||||||||||||||||    
T  2282453 ttttgaactaaatacattaacttttgttgaccaatttt 2282416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 251 - 292
Target Start/End: Complemental strand, 31323873 - 31323832
Alignment:
Q  251 caaattttgaactaaatacattaatttttgttgaccaatttt 292  Q
    |||||||||||| ||||||||||| |||||||||||||||||    
T  31323873 caaattttgaacaaaatacattaacttttgttgaccaatttt 31323832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 254 - 304
Target Start/End: Complemental strand, 28596131 - 28596080
Alignment:
Q  254 attttgaactaaatacattaatttttgttgaccaa-ttttacttatattttg 304  Q
    ||||||||| ||||| ||||||||||||||||||| ||||||||| ||||||    
T  28596131 attttgaaccaaatatattaatttttgttgaccaatttttacttacattttg 28596080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 251 - 309
Target Start/End: Complemental strand, 35003818 - 35003759
Alignment:
Q  251 caaattttgaactaaatacattaatttttgttgaccaa-ttttacttatattttgggacg 309  Q
    |||||||||||  |||||||||||||||| || ||||| ||||||||||||||| |||||    
T  35003818 caaattttgaatcaaatacattaatttttattaaccaatttttacttatattttaggacg 35003759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 253 - 309
Target Start/End: Original strand, 7343294 - 7343351
Alignment:
Q  253 aattttgaactaaatacattaatttttgttgaccaatttt-acttatattttgggacg 309  Q
    ||||||||| |||||| ||||| ||||||||| ||||||| ||||||||||| |||||    
T  7343294 aattttgaaataaatatattaacttttgttgatcaatttttacttatattttaggacg 7343351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 252 - 308
Target Start/End: Complemental strand, 14446754 - 14446697
Alignment:
Q  252 aaattttgaactaaatacattaatttttgttgaccaa-ttttacttatattttgggac 308  Q
    ||||||||||| | ||||||||| ||||||||||||| |||| |||| ||||||||||    
T  14446754 aaattttgaacaacatacattaacttttgttgaccaacttttgcttacattttgggac 14446697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 252 - 304
Target Start/End: Original strand, 24640142 - 24640195
Alignment:
Q  252 aaattttgaactaaatacattaatttttgttgaccaa-ttttacttatattttg 304  Q
    ||||||||||||||||| ||||| ||||||||| ||| ||||||| ||||||||    
T  24640142 aaattttgaactaaataaattaacttttgttgatcaacttttactaatattttg 24640195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 251 - 307
Target Start/End: Original strand, 28004674 - 28004731
Alignment:
Q  251 caaattttgaactaaatacattaatttttgttgaccaatttt-acttatattttggga 307  Q
    |||||||||| | ||||||||||| |||||||||| ||||||  ||||||||||||||    
T  28004674 caaattttgagccaaatacattaacttttgttgactaattttcccttatattttggga 28004731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 34; Significance: 0.0000000008; HSPs: 5)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 251 - 292
Target Start/End: Complemental strand, 15114676 - 15114635
Alignment:
Q  251 caaattttgaactaaatacattaatttttgttgaccaatttt 292  Q
    |||||||||||  |||||||||||||||||||||||||||||    
T  15114676 caaattttgaatcaaatacattaatttttgttgaccaatttt 15114635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 251 - 299
Target Start/End: Original strand, 11196268 - 11196316
Alignment:
Q  251 caaattttgaactaaatacattaatttttgttgaccaattttacttata 299  Q
    ||||||||||| |||||||||||||||||||||| || |||| ||||||    
T  11196268 caaattttgaattaaatacattaatttttgttgatcagttttgcttata 11196316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 252 - 303
Target Start/End: Original strand, 44080727 - 44080779
Alignment:
Q  252 aaattttgaactaaatacattaatttttgttgaccaa-ttttacttatatttt 303  Q
    |||||||||  |||||||||||||||||||||| ||| |||||||||||||||    
T  44080727 aaattttgagttaaatacattaatttttgttgatcaatttttacttatatttt 44080779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 251 - 308
Target Start/End: Original strand, 33557826 - 33557884
Alignment:
Q  251 caaattttgaactaaatacattaatttttgttgaccaa-ttttacttatattttgggac 308  Q
    |||||||||||||||||||||||| |||| |||| ||| |||||||||| |||| ||||    
T  33557826 caaattttgaactaaatacattaacttttattgatcaatttttacttatgttttaggac 33557884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 251 - 292
Target Start/End: Complemental strand, 13210023 - 13209982
Alignment:
Q  251 caaattttgaactaaatacattaatttttgttgaccaatttt 292  Q
    |||||||||||| ||||||||||| ||||||||| |||||||    
T  13210023 caaattttgaaccaaatacattaacttttgttgatcaatttt 13209982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 34; Significance: 0.0000000008; HSPs: 9)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 251 - 292
Target Start/End: Complemental strand, 3956217 - 3956176
Alignment:
Q  251 caaattttgaactaaatacattaatttttgttgaccaatttt 292  Q
    |||||||| ||||||||||||| |||||||||||||||||||    
T  3956217 caaattttaaactaaatacatttatttttgttgaccaatttt 3956176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 251 - 292
Target Start/End: Complemental strand, 26104277 - 26104236
Alignment:
Q  251 caaattttgaactaaatacattaatttttgttgaccaatttt 292  Q
    ||||||||||||||||||||||| |||||||| |||||||||    
T  26104277 caaattttgaactaaatacattagtttttgttaaccaatttt 26104236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 251 - 303
Target Start/End: Complemental strand, 31280214 - 31280161
Alignment:
Q  251 caaattttgaactaaatacattaatttttgttgaccaa-ttttacttatatttt 303  Q
    |||||||||||| ||||||||||| ||||||||| ||| |||||||||||||||    
T  31280214 caaattttgaaccaaatacattaaattttgttgatcaatttttacttatatttt 31280161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 251 - 322
Target Start/End: Complemental strand, 47783137 - 47783065
Alignment:
Q  251 caaattttgaactaaatacattaatttttgttgaccaa-ttttacttatattttgggacgaaatgagtacact 322  Q
    |||||||||||| ||||||||||| |||| |||||||| ||||||||| ||||||| | | || |||||||||    
T  47783137 caaattttgaaccaaatacattaactttttttgaccaatttttacttacattttggaatggaaggagtacact 47783065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 251 - 292
Target Start/End: Original strand, 32221521 - 32221562
Alignment:
Q  251 caaattttgaactaaatacattaatttttgttgaccaatttt 292  Q
    |||||||||||| ||||||||||| |||||||||| ||||||    
T  32221521 caaattttgaaccaaatacattaacttttgttgactaatttt 32221562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 251 - 292
Target Start/End: Complemental strand, 40955837 - 40955796
Alignment:
Q  251 caaattttgaactaaatacattaatttttgttgaccaatttt 292  Q
    |||||||||||||||||||| |||||||| |||| |||||||    
T  40955837 caaattttgaactaaatacaataatttttattgatcaatttt 40955796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 252 - 292
Target Start/End: Original strand, 26914501 - 26914541
Alignment:
Q  252 aaattttgaactaaatacattaatttttgttgaccaatttt 292  Q
    ||||||||||| | ||||||||||||||||||| |||||||    
T  26914501 aaattttgaaccacatacattaatttttgttgatcaatttt 26914541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 252 - 292
Target Start/End: Complemental strand, 40905860 - 40905820
Alignment:
Q  252 aaattttgaactaaatacattaatttttgttgaccaatttt 292  Q
    ||||||||||| ||||| ||||| |||||||||||||||||    
T  40905860 aaattttgaaccaaataaattaacttttgttgaccaatttt 40905820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 264 - 311
Target Start/End: Original strand, 46829106 - 46829154
Alignment:
Q  264 aaatacattaatttttgttgaccaa-ttttacttatattttgggacgaa 311  Q
    ||||||||||| ||||||||||||| |||| |||||||||| |||||||    
T  46829106 aaatacattaacttttgttgaccaatttttgcttatattttaggacgaa 46829154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University