View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

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 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF15363_high_7 (Length: 397)

Name: NF15363_high_7
Description: NF15363
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF15363_high_7
NF15363_high_7
[»] chr6 (1 HSPs)
chr6 (23-382)||(35097668-35098021)


Alignment Details
Target: chr6 (Bit Score: 280; Significance: 1e-157; HSPs: 1)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 280; E-Value: 1e-157
Query Start/End: Original strand, 23 - 382
Target Start/End: Original strand, 35097668 - 35098021
Alignment:
Q  23 aattctcaagaaaaaatgacacacatagctttttgaaggacatagcttgtcattcttctaaagttcaaagggtaatttcgtaacaacaaaaacattcatt 122  Q
    |||||||||||||||||   ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  35097668 aattctcaagaaaaaat---acacataactttttgaaggacatagcttgtcattcttctaaagttcaaagggtaatttcgtaacaacaaaaacattcatt 35097764  T
Q  123 cnnnnnnnnnnnnnnnnnnnacactggcacaaaaaacataaacccttattcgctgaaccaaaacccattcatcaccattttcttcatcttctcgaacacc 222  Q
    |                   ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  35097765 catatattttttttttt---acactggcacaaaaaacataaacccttattcgctgaaccaaaacccattcatcaccattttcttcatcttctcgaacacc 35097861  T
Q  223 ggcggcgacattctaagggcaaaatgggtattttcgaaccatacagagccatcggatgcatctccaccggtgtccctttctccgttcaacgactcaacac 322  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  35097862 ggcggcgacattctaagggcaaaatgggtattttcgaaccatacagagccatcggatgcatctccaccggtgtccctttctccgttcaacgactcaacac 35097961  T
Q  323 tgaaactttcgtcactgtttccgttggtaaagcttttcagattttcaactatgctaaact 382  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  35097962 tgaaactttcgtcactgtttccgttggtaaagcttttcagattttcaactatgctaaact 35098021  T

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