View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15363_low_24 (Length: 289)
Name: NF15363_low_24
Description: NF15363
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15363_low_24 |
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Alignment Details
Target: chr1 (Bit Score: 250; Significance: 1e-139; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 250; E-Value: 1e-139
Query Start/End: Original strand, 18 - 279
Target Start/End: Original strand, 3924091 - 3924352
Alignment:
| Q |
18 |
aaaacatctacgttgctagagctattttttccattatcaaaagcaaacacttggttcaatgatgagttgctggtttctaagaaaaatgttgttgctttta |
117 |
Q |
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| T |
3924091 |
aaaacatctacgttgctagagctattttttccattatcaaaagcaaacacttggttcaatgatgagttgctggtttctaagaaaaatgttgttgcttttg |
3924190 |
T |
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| Q |
118 |
cgtttccaagtactacctctacatagagattatggatattgggaaagtctatgacctttacaacccttacaaataagaactccatttcttcaacaaggtc |
217 |
Q |
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||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |
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| T |
3924191 |
cgtttccaagtaccacctctacatagagattatggatattgggaaagtctatgacctttacaacccttacaaataagaattccatttcttcaacaaggtc |
3924290 |
T |
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| Q |
218 |
atatctccttgtaagcttatcagcttcaaatgcagcattattgttaacactagtctcctttg |
279 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
3924291 |
atatctccttgtaagcttatcagcttcaaatgcagcattattgttaacactagtctcctttg |
3924352 |
T |
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