View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF15364_high_1 (Length: 839)

Name: NF15364_high_1
Description: NF15364
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF15364_high_1
NF15364_high_1
[»] chr3 (87 HSPs)
chr3 (19-839)||(14223015-14223841)
chr3 (93-839)||(14209107-14209864)
chr3 (130-839)||(14216886-14217602)
chr3 (714-838)||(55401070-55401194)
chr3 (733-839)||(10954946-10955052)
chr3 (714-839)||(20503459-20503584)
chr3 (714-836)||(27505243-27505370)
chr3 (716-839)||(28917995-28918120)
chr3 (712-834)||(40993273-40993396)
chr3 (712-836)||(49651714-49651848)
chr3 (714-839)||(18426943-18427068)
chr3 (716-839)||(4987222-4987356)
chr3 (711-839)||(26492142-26492270)
chr3 (715-839)||(15999951-16000081)
chr3 (714-833)||(51206293-51206412)
chr3 (773-839)||(21479112-21479178)
chr3 (777-839)||(26508104-26508166)
chr3 (716-839)||(25775502-25775624)
chr3 (774-839)||(34910311-34910376)
chr3 (736-836)||(7171499-7171598)
chr3 (763-839)||(10335275-10335351)
chr3 (712-839)||(41961577-41961715)
chr3 (774-833)||(1509539-1509598)
chr3 (773-839)||(8587020-8587086)
chr3 (714-839)||(34185052-34185188)
chr3 (774-839)||(14829684-14829748)
chr3 (774-839)||(15796294-15796359)
chr3 (774-839)||(28812509-28812574)
chr3 (775-839)||(10268487-10268551)
chr3 (780-836)||(35994744-35994799)
chr3 (768-835)||(7928448-7928515)
chr3 (768-839)||(8383251-8383322)
chr3 (715-835)||(8789489-8789611)
chr3 (778-833)||(21256990-21257045)
chr3 (714-827)||(11251984-11252095)
chr3 (774-839)||(14832093-14832158)
chr3 (790-839)||(14979175-14979224)
chr3 (714-839)||(35222932-35223057)
chr3 (763-839)||(10318024-10318099)
chr3 (716-839)||(24204983-24205106)
chr3 (774-839)||(14747555-14747621)
chr3 (774-836)||(25948887-25948949)
chr3 (782-839)||(3164033-3164090)
chr3 (773-833)||(8593136-8593197)
chr3 (716-826)||(29508451-29508567)
chr3 (714-810)||(23657762-23657858)
chr3 (711-836)||(55212960-55213095)
chr3 (760-814)||(3865693-3865747)
chr3 (781-839)||(11610515-11610573)
chr3 (714-838)||(17276716-17276846)
chr3 (774-839)||(750618-750683)
chr3 (774-835)||(4990967-4991028)
chr3 (798-839)||(40052326-40052367)
chr3 (721-809)||(3631708-3631796)
chr3 (771-827)||(38731224-38731280)
chr3 (744-832)||(45451554-45451642)
chr3 (714-813)||(13845465-13845564)
chr3 (764-839)||(25093496-25093571)
chr3 (780-839)||(34307786-34307845)
chr3 (776-826)||(17005621-17005671)
chr3 (789-839)||(25064903-25064953)
chr3 (773-839)||(33359755-33359821)
chr3 (760-813)||(2941578-2941631)
chr3 (774-839)||(8039835-8039900)
chr3 (774-839)||(9800034-9800099)
chr3 (768-839)||(32400702-32400770)
chr3 (774-839)||(39756230-39756295)
chr3 (708-765)||(40052380-40052437)
chr3 (710-755)||(52369865-52369910)
chr3 (779-839)||(1514611-1514671)
chr3 (774-838)||(1550135-1550199)
chr3 (775-839)||(3610627-3610691)
chr3 (93-128)||(14202528-14202563)
chr3 (774-825)||(16789020-16789071)
chr3 (768-827)||(49505148-49505207)
chr3 (789-839)||(5407262-5407312)
chr3 (789-835)||(11313815-11313861)
chr3 (789-839)||(12704001-12704051)
chr3 (745-819)||(14338454-14338528)
chr3 (789-839)||(23870574-23870624)
chr3 (776-814)||(30184108-30184146)
chr3 (714-755)||(3730108-3730149)
chr3 (774-835)||(7614415-7614476)
chr3 (774-827)||(11665950-11666003)
chr3 (710-755)||(14979227-14979272)
chr3 (715-839)||(15864827-15864950)
chr3 (782-835)||(21861567-21861620)
[»] chr6 (89 HSPs)
chr6 (714-839)||(34595128-34595253)
chr6 (714-839)||(28152093-28152217)
chr6 (712-833)||(28715295-28715416)
chr6 (715-839)||(17841530-17841654)
chr6 (711-839)||(8776905-8777038)
chr6 (717-839)||(32978842-32978965)
chr6 (713-839)||(16833302-16833428)
chr6 (712-835)||(4877940-4878063)
chr6 (774-839)||(16766691-16766756)
chr6 (716-839)||(12696318-12696446)
chr6 (715-839)||(31959153-31959268)
chr6 (773-839)||(7977829-7977895)
chr6 (714-839)||(9107299-9107435)
chr6 (772-839)||(7801154-7801221)
chr6 (733-837)||(1191662-1191763)
chr6 (714-835)||(7377977-7378098)
chr6 (711-839)||(8365445-8365584)
chr6 (774-839)||(10770674-10770739)
chr6 (714-834)||(24645479-24645600)
chr6 (768-839)||(426508-426579)
chr6 (760-839)||(853845-853924)
chr6 (760-839)||(33001275-33001354)
chr6 (775-839)||(7938110-7938174)
chr6 (735-839)||(19040346-19040450)
chr6 (780-839)||(1681752-1681811)
chr6 (773-839)||(3209375-3209442)
chr6 (716-839)||(7265535-7265658)
chr6 (713-839)||(6898220-6898346)
chr6 (715-826)||(31384927-31385048)
chr6 (774-839)||(3398613-3398677)
chr6 (774-839)||(5970108-5970173)
chr6 (715-839)||(9658873-9658998)
chr6 (774-832)||(9911528-9911587)
chr6 (731-826)||(12627534-12627629)
chr6 (717-833)||(9025448-9025553)
chr6 (776-826)||(9522898-9522948)
chr6 (768-825)||(403858-403915)
chr6 (711-815)||(29020930-29021035)
chr6 (775-839)||(15489733-15489797)
chr6 (712-838)||(17327588-17327719)
chr6 (760-839)||(23771573-23771651)
chr6 (714-833)||(32511606-32511725)
chr6 (774-836)||(7930302-7930364)
chr6 (774-839)||(8713973-8714039)
chr6 (773-839)||(9629377-9629443)
chr6 (781-839)||(17341671-17341729)
chr6 (784-834)||(25010212-25010262)
chr6 (774-839)||(9027172-9027237)
chr6 (712-785)||(10339052-10339125)
chr6 (774-839)||(21395308-21395372)
chr6 (773-838)||(21924934-21924999)
chr6 (774-839)||(26562683-26562748)
chr6 (728-796)||(1315969-1316037)
chr6 (791-839)||(10842526-10842574)
chr6 (782-834)||(17435198-17435250)
chr6 (768-839)||(5732504-5732575)
chr6 (781-839)||(17302550-17302609)
chr6 (767-814)||(26402673-26402720)
chr6 (775-839)||(27904037-27904103)
chr6 (760-838)||(30851597-30851673)
chr6 (773-823)||(1700362-1700412)
chr6 (774-836)||(7996378-7996440)
chr6 (774-836)||(8022361-8022423)
chr6 (763-805)||(16388206-16388248)
chr6 (764-825)||(31579217-31579276)
chr6 (774-838)||(7027236-7027301)
chr6 (774-839)||(8931602-8931667)
chr6 (714-839)||(13360313-13360437)
chr6 (774-839)||(20371110-20371175)
chr6 (786-834)||(2224225-2224273)
chr6 (773-825)||(6327517-6327569)
chr6 (774-826)||(7151419-7151471)
chr6 (712-836)||(13364643-13364767)
chr6 (775-839)||(19044458-19044522)
chr6 (789-833)||(34225824-34225868)
chr6 (780-835)||(2117074-2117129)
chr6 (782-825)||(4118341-4118384)
chr6 (776-827)||(7086801-7086852)
chr6 (774-825)||(9617442-9617493)
chr6 (789-824)||(16388248-16388283)
chr6 (775-814)||(31429004-31429043)
chr6 (789-836)||(34290092-34290139)
chr6 (714-752)||(6389813-6389851)
chr6 (717-755)||(8389411-8389449)
chr6 (774-839)||(6214554-6214619)
chr6 (774-839)||(16488590-16488655)
chr6 (774-839)||(18367830-18367895)
chr6 (779-832)||(30866149-30866202)
chr6 (774-827)||(34073347-34073400)
[»] chr4 (75 HSPs)
chr4 (714-839)||(23292926-23293051)
chr4 (715-836)||(3947702-3947828)
chr4 (714-839)||(49431019-49431145)
chr4 (714-833)||(28964188-28964307)
chr4 (714-835)||(2361915-2362036)
chr4 (714-835)||(8423658-8423779)
chr4 (714-839)||(35157925-35158050)
chr4 (728-836)||(21945500-21945608)
chr4 (711-813)||(35161056-35161158)
chr4 (714-839)||(12895214-12895339)
chr4 (714-838)||(34306744-34306867)
chr4 (745-832)||(29205445-29205532)
chr4 (709-835)||(715540-715669)
chr4 (709-835)||(752866-752995)
chr4 (714-839)||(42640520-42640643)
chr4 (760-838)||(54580009-54580087)
chr4 (716-833)||(4157150-4157266)
chr4 (712-839)||(16073389-16073515)
chr4 (737-835)||(38846975-38847073)
chr4 (712-839)||(19482662-19482800)
chr4 (733-839)||(12797297-12797402)
chr4 (717-839)||(28084515-28084640)
chr4 (774-839)||(30298940-30299006)
chr4 (774-839)||(30327808-30327874)
chr4 (774-839)||(12895116-12895181)
chr4 (774-838)||(11596352-11596416)
chr4 (733-839)||(40481631-40481741)
chr4 (731-825)||(40179593-40179687)
chr4 (775-839)||(47263980-47264044)
chr4 (728-814)||(4157455-4157541)
chr4 (776-825)||(6485613-6485662)
chr4 (712-839)||(22234817-22234956)
chr4 (775-839)||(24613702-24613766)
chr4 (774-839)||(50280875-50280942)
chr4 (768-819)||(6879459-6879510)
chr4 (782-833)||(51701258-51701309)
chr4 (711-785)||(53381527-53381602)
chr4 (773-839)||(15029759-15029825)
chr4 (774-839)||(4383362-4383426)
chr4 (773-838)||(4672084-4672149)
chr4 (782-839)||(11651142-11651199)
chr4 (774-839)||(16303266-16303331)
chr4 (779-839)||(40613444-40613504)
chr4 (714-839)||(24343501-24343632)
chr4 (714-839)||(36635318-36635449)
chr4 (782-833)||(37203264-37203315)
chr4 (774-839)||(12708140-12708206)
chr4 (781-839)||(14126118-14126176)
chr4 (715-785)||(30982808-30982878)
chr4 (765-835)||(31800469-31800539)
chr4 (713-755)||(40784031-40784073)
chr4 (760-813)||(13307897-13307950)
chr4 (787-832)||(14465088-14465133)
chr4 (782-839)||(27706185-27706242)
chr4 (774-827)||(30982878-30982931)
chr4 (775-827)||(847957-848009)
chr4 (732-824)||(9996849-9996941)
chr4 (775-811)||(28000743-28000779)
chr4 (784-836)||(28720873-28720924)
chr4 (714-749)||(3144587-3144622)
chr4 (714-785)||(5414101-5414172)
chr4 (715-786)||(12323967-12324038)
chr4 (777-839)||(24543975-24544038)
chr4 (768-814)||(482232-482278)
chr4 (789-839)||(1747206-1747256)
chr4 (775-825)||(5775359-5775409)
chr4 (774-839)||(35723384-35723450)
chr4 (777-814)||(2626018-2626055)
chr4 (774-839)||(13134444-13134509)
chr4 (19-67)||(14465010-14465059)
chr4 (780-839)||(20633479-20633535)
chr4 (789-834)||(22440615-22440660)
chr4 (774-839)||(32273526-32273591)
chr4 (714-755)||(37203330-37203371)
chr4 (776-825)||(56110814-56110863)
[»] scaffold0652 (1 HSPs)
scaffold0652 (715-838)||(403-526)
[»] chr5 (74 HSPs)
chr5 (716-836)||(21190998-21191118)
chr5 (714-838)||(21576685-21576809)
chr5 (712-839)||(43564877-43565002)
chr5 (714-839)||(31084317-31084447)
chr5 (714-835)||(42893358-42893479)
chr5 (710-839)||(6247616-6247733)
chr5 (713-839)||(27932229-27932355)
chr5 (714-839)||(39698535-39698671)
chr5 (779-839)||(14674263-14674323)
chr5 (711-839)||(28588611-28588739)
chr5 (764-838)||(15883982-15884057)
chr5 (716-834)||(43001799-43001922)
chr5 (773-839)||(8420021-8420087)
chr5 (714-839)||(21522744-21522880)
chr5 (714-839)||(21533310-21533446)
chr5 (773-839)||(33178019-33178085)
chr5 (774-835)||(7677703-7677764)
chr5 (774-839)||(13287399-13287464)
chr5 (728-839)||(15382471-15382590)
chr5 (774-835)||(37328844-37328905)
chr5 (774-838)||(19579696-19579760)
chr5 (773-839)||(24906300-24906366)
chr5 (774-839)||(10298563-10298628)
chr5 (774-835)||(41633733-41633794)
chr5 (775-835)||(21351906-21351966)
chr5 (736-832)||(30502350-30502446)
chr5 (736-832)||(30542693-30542789)
chr5 (776-838)||(17177025-17177087)
chr5 (774-836)||(21542027-21542089)
chr5 (778-839)||(7218271-7218332)
chr5 (775-839)||(30135307-30135372)
chr5 (718-839)||(4105251-4105374)
chr5 (728-824)||(26312778-26312874)
chr5 (716-833)||(18421779-18421900)
chr5 (774-836)||(3966500-3966562)
chr5 (789-839)||(22013408-22013458)
chr5 (774-836)||(30183546-30183608)
chr5 (774-839)||(2436916-2436981)
chr5 (767-835)||(14422902-14422968)
chr5 (714-839)||(17123042-17123166)
chr5 (714-827)||(21194063-21194176)
chr5 (781-833)||(15405062-15405114)
chr5 (764-836)||(16203785-16203857)
chr5 (774-833)||(6471889-6471948)
chr5 (713-823)||(14873527-14873642)
chr5 (712-839)||(32630673-32630800)
chr5 (777-839)||(41995465-41995525)
chr5 (714-813)||(42029772-42029871)
chr5 (781-839)||(6326304-6326362)
chr5 (793-839)||(19552562-19552608)
chr5 (709-779)||(30098391-30098461)
chr5 (711-836)||(38464310-38464426)
chr5 (728-839)||(7997120-7997231)
chr5 (774-814)||(12199949-12199989)
chr5 (775-839)||(36642763-36642827)
chr5 (717-785)||(39268541-39268609)
chr5 (774-826)||(40131628-40131680)
chr5 (780-832)||(131762-131816)
chr5 (774-833)||(5894833-5894892)
chr5 (774-833)||(41091257-41091316)
chr5 (774-836)||(11685936-11685998)
chr5 (714-839)||(16304366-16304489)
chr5 (785-835)||(22299492-22299541)
chr5 (716-813)||(23015926-23016028)
chr5 (789-839)||(27144457-27144507)
chr5 (718-839)||(30098982-30099103)
chr5 (774-832)||(36838544-36838602)
chr5 (780-825)||(5467984-5468029)
chr5 (774-839)||(6035477-6035541)
chr5 (781-833)||(17088284-17088337)
chr5 (775-839)||(19028999-19029066)
chr5 (774-839)||(21814255-21814320)
chr5 (798-839)||(22611761-22611802)
chr5 (746-827)||(23012380-23012461)
[»] chr2 (70 HSPs)
chr2 (716-838)||(2438661-2438783)
chr2 (714-839)||(37558971-37559096)
chr2 (714-839)||(18840953-18841078)
chr2 (714-839)||(38117099-38117224)
chr2 (713-839)||(15972867-15972993)
chr2 (714-839)||(30404790-30404915)
chr2 (715-839)||(28596466-28596587)
chr2 (722-836)||(5040729-5040845)
chr2 (774-839)||(15657858-15657923)
chr2 (768-839)||(19536391-19536463)
chr2 (721-839)||(21624260-21624374)
chr2 (737-839)||(6940249-6940351)
chr2 (781-839)||(21374706-21374764)
chr2 (774-839)||(20539674-20539739)
chr2 (774-835)||(30717530-30717591)
chr2 (711-836)||(37411181-37411306)
chr2 (711-839)||(37419737-37419876)
chr2 (775-839)||(11223864-11223928)
chr2 (728-839)||(29176447-29176558)
chr2 (736-839)||(12224215-12224320)
chr2 (774-839)||(12668423-12668488)
chr2 (774-839)||(18421957-18422022)
chr2 (774-839)||(30335411-30335476)
chr2 (774-834)||(974746-974806)
chr2 (736-835)||(31808075-31808174)
chr2 (736-826)||(5367199-5367289)
chr2 (775-836)||(14996224-14996286)
chr2 (713-839)||(20242666-20242792)
chr2 (717-835)||(21091721-21091839)
chr2 (714-839)||(26769505-26769641)
chr2 (782-839)||(24894383-24894440)
chr2 (789-838)||(28677904-28677953)
chr2 (774-839)||(33153418-33153483)
chr2 (774-839)||(36756344-36756409)
chr2 (768-836)||(20473319-20473387)
chr2 (789-839)||(21616756-21616806)
chr2 (789-839)||(21782833-21782883)
chr2 (774-839)||(23058442-23058508)
chr2 (780-833)||(12940941-12940994)
chr2 (768-833)||(18255974-18256039)
chr2 (781-834)||(39323263-39323316)
chr2 (775-835)||(42832277-42832337)
chr2 (776-839)||(18420436-18420499)
chr2 (768-827)||(34691799-34691858)
chr2 (768-827)||(34714211-34714270)
chr2 (715-833)||(44860320-44860449)
chr2 (777-835)||(23718024-23718082)
chr2 (777-835)||(24105696-24105754)
chr2 (773-811)||(44635520-44635558)
chr2 (774-827)||(4882696-4882749)
chr2 (775-836)||(18276518-18276579)
chr2 (714-839)||(24009290-24009414)
chr2 (779-836)||(34221502-34221559)
chr2 (760-813)||(43585991-43586044)
chr2 (713-826)||(18622613-18622722)
chr2 (764-839)||(31284042-31284118)
chr2 (775-839)||(34337182-34337241)
chr2 (709-785)||(35056927-35057003)
chr2 (780-839)||(28524420-28524479)
chr2 (768-839)||(31018584-31018655)
chr2 (774-813)||(33884071-33884110)
chr2 (789-836)||(36409642-36409689)
chr2 (767-825)||(5473336-5473394)
chr2 (780-838)||(10535765-10535823)
chr2 (789-839)||(16069269-16069319)
chr2 (790-839)||(27460020-27460070)
chr2 (713-807)||(34993921-34994015)
chr2 (774-831)||(38442309-38442366)
chr2 (760-825)||(40361740-40361805)
chr2 (714-779)||(42511322-42511387)
[»] chr1 (103 HSPs)
chr1 (714-839)||(22515827-22515952)
chr1 (714-839)||(46348323-46348448)
chr1 (713-839)||(37598826-37598951)
chr1 (716-839)||(42359391-42359514)
chr1 (713-839)||(1815251-1815377)
chr1 (714-839)||(38078601-38078726)
chr1 (716-839)||(1486646-1486774)
chr1 (715-835)||(40258874-40258994)
chr1 (709-836)||(51410021-51410149)
chr1 (714-824)||(18337338-18337448)
chr1 (728-833)||(18190062-18190167)
chr1 (712-838)||(5898204-5898330)
chr1 (764-839)||(22881606-22881681)
chr1 (714-839)||(113293-113412)
chr1 (712-839)||(2896059-2896186)
chr1 (774-839)||(24577186-24577251)
chr1 (728-833)||(40181871-40181976)
chr1 (768-839)||(19058850-19058921)
chr1 (768-835)||(31672889-31672956)
chr1 (711-834)||(18471297-18471417)
chr1 (714-839)||(36878455-36878585)
chr1 (774-835)||(1704992-1705053)
chr1 (774-839)||(6612171-6612236)
chr1 (712-839)||(40917745-40917881)
chr1 (716-839)||(16297223-16297348)
chr1 (716-833)||(17778549-17778670)
chr1 (711-839)||(29163318-29163446)
chr1 (714-839)||(32461393-32461528)
chr1 (776-835)||(21378576-21378635)
chr1 (781-839)||(14359529-14359586)
chr1 (779-837)||(31015039-31015097)
chr1 (768-838)||(41877464-41877534)
chr1 (774-839)||(47989492-47989556)
chr1 (774-839)||(5944275-5944342)
chr1 (712-839)||(9828038-9828176)
chr1 (779-839)||(48450592-48450652)
chr1 (774-833)||(6332671-6332729)
chr1 (789-839)||(398780-398830)
chr1 (773-839)||(9103634-9103699)
chr1 (714-839)||(18556385-18556521)
chr1 (775-833)||(28273089-28273147)
chr1 (774-839)||(5376500-5376565)
chr1 (790-839)||(12443476-12443525)
chr1 (767-836)||(35702581-35702650)
chr1 (776-835)||(1864882-1864941)
chr1 (782-836)||(13011223-13011278)
chr1 (776-835)||(23738676-23738735)
chr1 (774-834)||(31694710-31694772)
chr1 (776-835)||(32434718-32434777)
chr1 (715-832)||(5927281-5927398)
chr1 (713-826)||(7918153-7918263)
chr1 (763-835)||(24334694-24334767)
chr1 (781-838)||(29144365-29144422)
chr1 (774-834)||(9629900-9629960)
chr1 (715-839)||(10577676-10577800)
chr1 (714-839)||(19562556-19562686)
chr1 (780-839)||(3490396-3490455)
chr1 (776-839)||(10572591-10572654)
chr1 (768-839)||(13436452-13436523)
chr1 (776-839)||(13997877-13997940)
chr1 (764-839)||(21530683-21530758)
chr1 (774-833)||(25272482-25272541)
chr1 (719-814)||(26830607-26830701)
chr1 (789-839)||(1262878-1262928)
chr1 (768-814)||(21620974-21621020)
chr1 (774-839)||(6427344-6427409)
chr1 (713-836)||(6427458-6427595)
chr1 (760-813)||(30749860-30749913)
chr1 (760-813)||(30771311-30771364)
chr1 (773-838)||(39953145-39953210)
chr1 (734-839)||(43492454-43492559)
chr1 (774-823)||(44482240-44482289)
chr1 (768-832)||(9709821-9709885)
chr1 (715-811)||(12918967-12919063)
chr1 (766-826)||(14332634-14332694)
chr1 (774-814)||(15449232-15449272)
chr1 (791-839)||(17831548-17831596)
chr1 (774-834)||(20157350-20157410)
chr1 (774-838)||(25361881-25361945)
chr1 (775-827)||(27471567-27471619)
chr1 (774-814)||(28663627-28663667)
chr1 (774-814)||(30173762-30173802)
chr1 (774-814)||(35919276-35919316)
chr1 (775-835)||(38503318-38503378)
chr1 (789-828)||(16927200-16927239)
chr1 (792-835)||(17754309-17754352)
chr1 (792-835)||(23652997-23653040)
chr1 (789-836)||(25098570-25098617)
chr1 (774-813)||(34371733-34371772)
chr1 (768-839)||(52903243-52903314)
chr1 (774-808)||(2218264-2218298)
chr1 (735-839)||(9690234-9690337)
chr1 (793-839)||(21366039-21366085)
chr1 (789-835)||(34298434-34298480)
chr1 (773-839)||(38075969-38076035)
chr1 (778-839)||(48040465-48040527)
chr1 (774-823)||(2283676-2283725)
chr1 (794-839)||(10474997-10475042)
chr1 (782-827)||(11605943-11605988)
chr1 (781-830)||(15323166-15323215)
chr1 (789-834)||(19324561-19324606)
chr1 (712-785)||(25934675-25934748)
chr1 (714-827)||(34712323-34712436)
[»] scaffold0053 (1 HSPs)
scaffold0053 (714-839)||(8792-8917)
[»] chr8 (72 HSPs)
chr8 (714-839)||(36450694-36450819)
chr8 (711-839)||(5813586-5813714)
chr8 (709-839)||(29510228-29510369)
chr8 (712-833)||(40332191-40332312)
chr8 (712-836)||(18407716-18407840)
chr8 (736-839)||(31556991-31557093)
chr8 (760-839)||(20873063-20873142)
chr8 (760-839)||(22595988-22596067)
chr8 (715-835)||(24613519-24613640)
chr8 (774-833)||(25566841-25566900)
chr8 (713-835)||(8342970-8343087)
chr8 (714-839)||(15816058-15816194)
chr8 (714-839)||(22651970-22652106)
chr8 (709-826)||(14134706-14134823)
chr8 (716-827)||(3025557-3025668)
chr8 (713-839)||(4298829-4298951)
chr8 (767-826)||(4948659-4948718)
chr8 (774-839)||(2572056-2572121)
chr8 (774-839)||(13436964-13437029)
chr8 (716-839)||(926730-926853)
chr8 (713-835)||(8343314-8343447)
chr8 (716-826)||(20679337-20679447)
chr8 (773-839)||(30077386-30077452)
chr8 (774-839)||(30271291-30271356)
chr8 (775-839)||(22197743-22197807)
chr8 (780-836)||(41831946-41832002)
chr8 (773-839)||(13844595-13844661)
chr8 (777-839)||(25192350-25192412)
chr8 (714-807)||(24413499-24413592)
chr8 (775-839)||(4673426-4673490)
chr8 (774-838)||(11927086-11927150)
chr8 (774-834)||(17468508-17468568)
chr8 (775-839)||(29447111-29447175)
chr8 (767-839)||(31236570-31236642)
chr8 (714-827)||(37283755-37283863)
chr8 (774-833)||(21465412-21465471)
chr8 (773-839)||(18170481-18170547)
chr8 (773-839)||(18634049-18634115)
chr8 (773-839)||(34897079-34897145)
chr8 (774-839)||(11944659-11944724)
chr8 (774-839)||(24669427-24669492)
chr8 (782-839)||(41838131-41838188)
chr8 (733-813)||(31580086-31580166)
chr8 (760-839)||(4786324-4786403)
chr8 (714-839)||(24858003-24858135)
chr8 (764-839)||(27101509-27101583)
chr8 (763-833)||(31514872-31514943)
chr8 (714-825)||(33405324-33405435)
chr8 (789-839)||(24362217-24362267)
chr8 (789-839)||(39954294-39954344)
chr8 (715-813)||(43737752-43737850)
chr8 (760-805)||(15023243-15023288)
chr8 (714-814)||(3951476-3951576)
chr8 (776-832)||(7442846-7442902)
chr8 (779-839)||(27213541-27213601)
chr8 (774-834)||(28745497-28745557)
chr8 (719-839)||(31109463-31109583)
chr8 (714-825)||(39820437-39820547)
chr8 (773-833)||(44694791-44694851)
chr8 (711-834)||(949202-949324)
chr8 (760-811)||(9414861-9414912)
chr8 (775-834)||(12606830-12606889)
chr8 (774-813)||(26902175-26902214)
chr8 (712-755)||(27213603-27213646)
chr8 (714-785)||(34450961-34451032)
chr8 (780-839)||(44067510-44067569)
chr8 (789-835)||(4611532-4611578)
chr8 (776-838)||(7658458-7658520)
chr8 (774-812)||(8847277-8847315)
chr8 (768-806)||(30271249-30271287)
chr8 (789-839)||(36934664-36934714)
chr8 (714-755)||(16641909-16641950)
[»] chr7 (79 HSPs)
chr7 (711-839)||(5409768-5409901)
chr7 (714-827)||(21880158-21880271)
chr7 (707-833)||(9778500-9778631)
chr7 (713-839)||(15680803-15680929)
chr7 (714-839)||(24339636-24339772)
chr7 (714-839)||(24105672-24105797)
chr7 (714-839)||(43027404-43027534)
chr7 (710-839)||(7197233-7197362)
chr7 (714-834)||(598207-598327)
chr7 (767-839)||(25481896-25481968)
chr7 (715-834)||(32287404-32287523)
chr7 (714-833)||(21864806-21864927)
chr7 (719-838)||(13770686-13770810)
chr7 (736-835)||(8234144-8234243)
chr7 (715-835)||(20549789-20549909)
chr7 (774-835)||(3991322-3991383)
chr7 (775-836)||(7438703-7438764)
chr7 (774-839)||(18215186-18215251)
chr7 (714-832)||(32093954-32094079)
chr7 (775-835)||(11061077-11061137)
chr7 (713-827)||(1401031-1401143)
chr7 (778-829)||(26033465-26033516)
chr7 (712-839)||(33994206-33994333)
chr7 (773-839)||(28155564-28155630)
chr7 (774-835)||(9408334-9408395)
chr7 (774-839)||(27945035-27945100)
chr7 (718-839)||(40287306-40287421)
chr7 (774-838)||(11272586-11272652)
chr7 (766-833)||(19213803-19213870)
chr7 (774-833)||(19992001-19992060)
chr7 (774-839)||(21560492-21560562)
chr7 (733-839)||(26733298-26733404)
chr7 (774-839)||(25822649-25822714)
chr7 (774-839)||(35861958-35862023)
chr7 (775-839)||(11665441-11665505)
chr7 (774-814)||(18039018-18039058)
chr7 (728-838)||(5835242-5835352)
chr7 (789-839)||(29787384-29787434)
chr7 (714-838)||(18212973-18213098)
chr7 (734-835)||(27093373-27093474)
chr7 (734-835)||(27184827-27184928)
chr7 (790-839)||(32308114-32308163)
chr7 (774-814)||(2334269-2334309)
chr7 (774-826)||(7058433-7058485)
chr7 (775-839)||(19206044-19206108)
chr7 (715-839)||(22484019-22484143)
chr7 (775-826)||(13300417-13300468)
chr7 (787-838)||(23191891-23191942)
chr7 (714-833)||(42720830-42720949)
chr7 (714-839)||(1433448-1433578)
chr7 (784-834)||(11831431-11831481)
chr7 (774-839)||(22602710-22602775)
chr7 (790-839)||(30731031-30731080)
chr7 (775-819)||(48438560-48438604)
chr7 (768-827)||(3721099-3721158)
chr7 (764-823)||(9482944-9483003)
chr7 (774-825)||(11890919-11890970)
chr7 (783-814)||(13557750-13557781)
chr7 (714-777)||(17852056-17852119)
chr7 (768-839)||(21826267-21826338)
chr7 (767-818)||(25956460-25956511)
chr7 (776-839)||(41020490-41020553)
chr7 (780-839)||(43249987-43250046)
chr7 (789-827)||(2424620-2424658)
chr7 (774-836)||(5548673-5548735)
chr7 (789-839)||(22868036-22868086)
chr7 (774-824)||(27229311-27229360)
chr7 (714-752)||(29812598-29812636)
chr7 (767-813)||(39138464-39138510)
chr7 (707-824)||(41229230-41229348)
chr7 (775-812)||(640134-640171)
chr7 (774-819)||(1885587-1885632)
chr7 (774-839)||(6630912-6630977)
chr7 (774-827)||(7328691-7328744)
chr7 (774-839)||(10042931-10042996)
chr7 (776-825)||(15902830-15902879)
chr7 (774-839)||(21930623-21930687)
chr7 (714-771)||(29763129-29763186)
chr7 (782-827)||(30813818-30813863)
[»] scaffold0361 (1 HSPs)
scaffold0361 (714-839)||(14524-14646)
[»] scaffold0003 (1 HSPs)
scaffold0003 (714-839)||(241588-241724)
[»] scaffold0050 (1 HSPs)
scaffold0050 (717-834)||(70277-70394)
[»] scaffold0793 (1 HSPs)
scaffold0793 (709-835)||(4816-4945)
[»] scaffold0223 (1 HSPs)
scaffold0223 (774-839)||(20166-20231)
[»] scaffold0103 (1 HSPs)
scaffold0103 (782-839)||(51805-51862)
[»] scaffold0027 (1 HSPs)
scaffold0027 (774-839)||(46676-46741)
[»] scaffold0306 (1 HSPs)
scaffold0306 (716-839)||(13394-13523)
[»] scaffold0152 (1 HSPs)
scaffold0152 (716-839)||(21804-21933)
[»] scaffold0011 (1 HSPs)
scaffold0011 (775-839)||(17750-17814)
[»] scaffold0246 (1 HSPs)
scaffold0246 (733-839)||(19570-19680)
[»] scaffold0021 (1 HSPs)
scaffold0021 (777-836)||(130479-130538)
[»] scaffold0122 (2 HSPs)
scaffold0122 (765-839)||(8004-8077)
scaffold0122 (774-839)||(8660-8725)
[»] scaffold0066 (1 HSPs)
scaffold0066 (786-839)||(33375-33428)
[»] scaffold0018 (2 HSPs)
scaffold0018 (775-839)||(178819-178884)
scaffold0018 (781-839)||(192256-192314)
[»] scaffold0722 (1 HSPs)
scaffold0722 (762-834)||(7020-7092)
[»] scaffold0019 (1 HSPs)
scaffold0019 (711-839)||(71717-71858)
[»] scaffold0083 (1 HSPs)
scaffold0083 (760-807)||(45516-45563)
[»] scaffold0475 (1 HSPs)
scaffold0475 (713-803)||(3338-3428)
[»] scaffold0136 (1 HSPs)
scaffold0136 (774-836)||(3849-3911)
[»] scaffold0025 (1 HSPs)
scaffold0025 (774-831)||(23771-23829)
[»] scaffold0004 (4 HSPs)
scaffold0004 (781-839)||(92801-92859)
scaffold0004 (775-839)||(123619-123686)
scaffold0004 (774-814)||(83179-83219)
scaffold0004 (715-780)||(92875-92940)
[»] scaffold0227 (1 HSPs)
scaffold0227 (782-839)||(7319-7376)
[»] scaffold0171 (2 HSPs)
scaffold0171 (774-839)||(23414-23479)
scaffold0171 (774-814)||(23530-23570)
[»] scaffold0154 (1 HSPs)
scaffold0154 (714-785)||(13472-13543)
[»] scaffold0512 (1 HSPs)
scaffold0512 (714-796)||(4976-5058)
[»] scaffold0450 (1 HSPs)
scaffold0450 (774-836)||(8635-8697)
[»] scaffold0044 (1 HSPs)
scaffold0044 (777-839)||(53174-53236)
[»] scaffold0049 (1 HSPs)
scaffold0049 (775-832)||(63774-63831)
[»] scaffold0020 (1 HSPs)
scaffold0020 (774-835)||(135312-135373)
[»] scaffold0697 (1 HSPs)
scaffold0697 (764-839)||(1638-1713)
[»] scaffold0008 (1 HSPs)
scaffold0008 (774-832)||(263372-263430)
[»] scaffold0057 (1 HSPs)
scaffold0057 (787-835)||(24023-24071)
[»] scaffold0036 (1 HSPs)
scaffold0036 (774-826)||(9747-9799)
[»] scaffold1528 (1 HSPs)
scaffold1528 (792-835)||(1033-1076)
[»] scaffold0236 (1 HSPs)
scaffold0236 (774-813)||(25768-25807)
[»] scaffold0123 (1 HSPs)
scaffold0123 (778-833)||(44529-44584)
[»] scaffold0086 (1 HSPs)
scaffold0086 (714-785)||(2987-3058)
[»] scaffold0007 (1 HSPs)
scaffold0007 (780-839)||(225274-225333)
[»] scaffold0009 (2 HSPs)
scaffold0009 (736-814)||(174515-174593)
scaffold0009 (736-814)||(180028-180106)


Alignment Details
Target: chr3 (Bit Score: 689; Significance: 0; HSPs: 87)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 689; E-Value: 0
Query Start/End: Original strand, 19 - 839
Target Start/End: Complemental strand, 14223841 - 14223015
Alignment:
Q  19 gacacgtgtccgacatgggacacgtctaatctgaggagtttctgtgctttatagataataaatcatggataaattgagtgatagaatttaccttaactga 118  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14223841 gacacgtgtccgacatgggacacgcctaatctgaggagtttctgtgctttatagataataaatcatggataaattgagtgatagaatttaccttaactga 14223742  T
Q  119 ggaggattttcagggtaaacattgaagttagatcttggaggaaaaacaagcaagtattcatttttgtctggtgagtgtgatggctgtctactatagccag 218  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14223741 ggaggattttcagggtaaacattgaagttagatcttggaggaaaaacaagcaagtattcatttttgtctggtgagtgtgatggctgtctactatagccag 14223642  T
Q  219 caggaactggagcattagaagaaggactgctcttgttcttttcttcatctgagtaattgaaaaatgttttggataactccatggcttgtttcatcaaatc 318  Q
    |||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14223641 caggaagtggagcattagaagaaggactgctcttattcttttcttcatctgagtaattgaaaaatgttttggataactccatggcttgtttcatcaaatc 14223542  T
Q  319 taaagaaataccatggttcacaatttggaagaaaccatattcagaacatgcttttgtgattgtttccatggctttctttttattgtcatccttgttttct 418  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14223541 taaagaaataccatggttcacaatttggaagaaaccatattcagaacatgcttttgtgattgtttccatggctttctttttattgtcatccttgttttct 14223442  T
Q  419 ttgaggaaaggagagagatcaattgtgggaataataggctcaaccatctcttacttctctaattgcttctcaaatgtcaactttttctatagtatgattt 518  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||| ||||||||||||||    
T  14223441 ttgaggaaaggagagagatcaattgtgggaataataggctcaaccatctcttgcttctctaattgcttctcaaa-gtcaacttttgctatagtatgattt 14223343  T
Q  519 agattgaagacaagaatggtatggtaagttggtaaacaatcacattggatcaccccttcttcttattattattttttaaaattattaggcttaatagtac 618  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14223342 agattgaagacaagaatggtatggtaagttggtaaacaatcacattggatcaccccttcttcttattattattttttaaaattattaggcttaatagtac 14223243  T
Q  619 ttttgatccctctgttttatcaatctctcaaaaatagttatcttttaataaattgattttttagtccctctatttttacatatcttggtcataacctatg 718  Q
    ||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    | ||||    
T  14223242 ttttggtccctctattttatcaatctctcaaaaatagttatcttttaataaattgattttttagtccctctatttttacatatcttcgtc----cgtatg 14223147  T
Q  719 aagcacggtcacttctcggattaggtgtgtcccggtgacgtacacgtgtcgtg-----------cccgacaccgacacttgtaattacactgaattatgt 807  Q
    |||||||| |||||||||||||||||||||||| ||| |||||||||||||||           | |||||| ||||||||||||||||||||||||| |    
T  14223146 aagcacggacacttctcggattaggtgtgtcccagtgtcgtacacgtgtcgtgtccgacactaacacgacacggacacttgtaattacactgaattatat 14223047  T
Q  808 gatttttacaaattattagctgtgtcggcgtg 839  Q
    ||| |||  |||||||||| ||||||| ||||    
T  14223046 gatattttaaaattattagttgtgtcgacgtg 14223015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 624; E-Value: 0
Query Start/End: Original strand, 93 - 839
Target Start/End: Complemental strand, 14209864 - 14209107
Alignment:
Q  93 tgagtgatagaatttaccttaactgaggaggattttcagggtaaacattgaagttagatcttggaggaaaaacaagcaagtattcatttttgtctggtga 192  Q
    |||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14209864 tgagtgatagaatttaccttaacttaggaggattttgagggtaaacattgaagttagatcttggaggaaaaacaagcaagtattcatttttgtctggtga 14209765  T
Q  193 gtgtgatggctgtctactatagccagcaggaactggagcattagaagaaggactgctcttgttcttttcttcatctgagtaattgaaaaatgttttggat 292  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14209764 gtgtgatggctgtctactatagccagcaggaagtggagcattagaagaaggactgctcttgttcttttcttcatctgagtaattgaaaaatgttttggat 14209665  T
Q  293 aactccatggcttgtttcatcaaatctaaagaaataccatggttcacaatttggaagaaaccatattcagaacatgcttttgtgattgtttccatggctt 392  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14209664 aactccatggcttgtttcatcaaatctaaagaaacaccatggttcacaatttggaagaaaccatattcagaacatgcttttgtgattgtttccatggctt 14209565  T
Q  393 tctttttattgtcatccttgttttctttgaggaaaggagagagatcaattgtgggaataataggctcaaccatctcttacttctctaattgcttctcaaa 492  Q
    ||||||| ||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14209564 tctttttgttgccatccttgttttctttgaggaaaggaaagagatcaattgtgggaataataggctcaaccatctcttacttctctaattgcttctcaaa 14209465  T
Q  493 tgtcaactttttctatagtatgatttagattgaagacaagaatggtatggtaagttggtaaacaatcacattggatcaccccttcttcttattattattt 592  Q
    ||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14209464 tgtaaacttttgctatagtatgatttagattgaagacaagaatggtatggtaagttggtaaacaatcacattggatcaccccttcttcttattattattt 14209365  T
Q  593 tttaaaattattaggcttaatagtacttttgatccctctgttttatcaatctctcaaaaatagttatcttttaataaattgattttttagtccctctatt 692  Q
    ||||||||||| ||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  14209364 tttaaaattatcaggtttaatagtacttttgatccctctattttatcaatctctcaaaaatagttatcttttaataaattgattttttagtccctctagt 14209265  T
Q  693 tttacatatcttggtcataacctatgaagcacggtcacttctcggattaggtgtgtcccggtgacgtacacgtgtcgtgcccgacaccg----------- 781  Q
    ||||||||||||| || ||||||||||||||||| ||||||| ||||||||||| ||||| || ||||||||||||||| |||||||||               
T  14209264 tttacatatcttgatcctaacctatgaagcacggacacttcttggattaggtgtatcccgatgtcgtacacgtgtcgtgtccgacaccgacacgacactg 14209165  T
Q  782 acacttgtaattacactgaattatgtgatttttacaaattattagctgtgtcggcgtg 839  Q
    |||||||||||||||||||||||||||||||||  |||||||||| ||||||||||||    
T  14209164 acacttgtaattacactgaattatgtgattttttaaaattattagttgtgtcggcgtg 14209107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 570; E-Value: 0
Query Start/End: Original strand, 130 - 839
Target Start/End: Complemental strand, 14217602 - 14216886
Alignment:
Q  130 agggtaaacattgaagttagatcttggaggaaaaacaagcaagtattcatttttgtctggtgagtgtgatggctgtctactatagccagcaggaactgga 229  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  14217602 agggtaaacattgaagttagatcttggaggaaaaacaagcaagtattcatttttgtctggtgagtgtgatggctgtctactatagccagcaggaagtgga 14217503  T
Q  230 gcattagaagaaggactgctcttgttcttttcttcatctgagtaattgaaaaatgttttggataactccatggcttgtttcatcaaatctaaagaaatac 329  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  14217502 gcattagaagaaggactgctcttattcttttcttcatctgagtaattgaaaaatgttttggataactccatggcttgtttcatcaaatctaaagaaacac 14217403  T
Q  330 catggttcacaatttggaagaaaccatattcagaacatgcttttgtgattgtttccatggctttctttttattgtcatccttgttttctttgaggaaagg 429  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||    
T  14217402 catggttcacaatttggaagaaaccatattcagaacatgcttttgtgattgtttccatggctttctttttgttgccatccttgttttctttgaggaaagg 14217303  T
Q  430 agagagatcaattgtgggaataataggctcaaccatctcttacttctctaattgcttctcaaatgtcaactttttctatagtatgatttagattgaagac 529  Q
    | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||    
T  14217302 aaagagatcaattgtgggaataataggctcaaccatctcttacttctctaattgcttctcaaatgtaaacttttgctatagtatgatttagattgaagac 14217203  T
Q  530 aagaatggtatggtaagttggtaaacaatcacattggatcaccccttcttcttattattattttttaaaattattaggcttaatagtacttttgatccct 629  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||    
T  14217202 aagaatggtatggtaagttggtaaacaatcacattggatcaccccttcttcttattattattttttaaaattatcaggtttaatagtacttttgatccct 14217103  T
Q  630 ctgttttatcaatctctcaaaaatagttatcttttaataaattgattttttagtccctctatttttacatatcttggtcataacctatgaagcacggtca 729  Q
    || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    | |||||||||||| ||    
T  14217102 ctattttatcaatctctcaaaaatagttatcttttaataaattgattttttagtccctctatttttacatatcttcgtc----cgtatgaagcacggaca 14217007  T
Q  730 cttctcggattaggtgtgtcccggtgacgtacacgtgtcgtg-----------cccgacaccgacacttgtaattacactgaattatgtgatttttacaa 818  Q
    |||||||||||||||||||||| ||| |||||||||||||||           | |||||| ||||||||||||||||||||||||| |||| |||  ||    
T  14217006 cttctcggattaggtgtgtcccagtgtcgtacacgtgtcgtgtccgacactaacacgacacggacacttgtaattacactgaattatatgatattttaaa 14216907  T
Q  819 attattagctgtgtcggcgtg 839  Q
    |||||||| ||||||| ||||    
T  14216906 attattagttgtgtcgacgtg 14216886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 85; E-Value: 5e-40
Query Start/End: Original strand, 714 - 838
Target Start/End: Complemental strand, 55401194 - 55401070
Alignment:
Q  714 ctatgaagcacggtcacttctcggattaggtgtgtcccggtgacgtacacgtgtcgtgcccgacaccgacacttgtaattacactgaattatgtgatttt 813  Q
    ||||||||||||| |||| ||||||||||| ||||| ||||| || |||||||||||| |||||||||||||||||||||||||| ||||||||||||||    
T  55401194 ctatgaagcacggacactcctcggattaggcgtgtctcggtgtcggacacgtgtcgtgtccgacaccgacacttgtaattacactaaattatgtgatttt 55401095  T
Q  814 tacaaattattagctgtgtcggcgt 838  Q
    | ||||||||||| |||||||||||    
T  55401094 ttcaaattattagttgtgtcggcgt 55401070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 733 - 839
Target Start/End: Complemental strand, 10955052 - 10954946
Alignment:
Q  733 ctcggattaggtgtgtcccggtgacgtacacgtgtcgtgcccgacaccgacacttgtaattacactgaattatgtgatttttacaaattattagctgtgt 832  Q
    ||||||||||| ||||||| ||| || |||||||||||| ||||||||||||||||| |||||||||||||||||||||||| ||||||||||| |||||    
T  10955052 ctcggattaggcgtgtcccagtgtcggacacgtgtcgtgtccgacaccgacacttgtgattacactgaattatgtgattttttcaaattattagttgtgt 10954953  T
Q  833 cggcgtg 839  Q
    |||||||    
T  10954952 cggcgtg 10954946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 714 - 839
Target Start/End: Complemental strand, 20503584 - 20503459
Alignment:
Q  714 ctatgaagcacggtcacttctcggattaggtgtgtcccggtgacgtacacgtgtcgtgcccgacaccgacacttgtaattacactgaattatgtgatttt 813  Q
    ||||||||||||| |||| ||||||||||| ||||||||||| |  ||| |||||||| || |||||||||||||||||||||||||||||||| |||||    
T  20503584 ctatgaagcacggacactcctcggattaggcgtgtcccggtgtcagacatgtgtcgtgtccaacaccgacacttgtaattacactgaattatgtcatttt 20503485  T
Q  814 tacaaattattagctgtgtcggcgtg 839  Q
    | ||||||||| | ||||||||||||    
T  20503484 ttcaaattatttgttgtgtcggcgtg 20503459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 714 - 836
Target Start/End: Complemental strand, 27505370 - 27505243
Alignment:
Q  714 ctatgaagcacggtcacttctcggattaggtgtgtcccggtgacgtacacgtgtcgtg-----cccgacaccgacacttgtaattacactgaattatgtg 808  Q
    ||||||||||||| |||| |||||||||||  |||||||||| || ||||||||||||     | ||||||||||||||||||||||||| |||||||||    
T  27505370 ctatgaagcacggacactcctcggattaggcatgtcccggtgtcggacacgtgtcgtgtcagacacgacaccgacacttgtaattacacttaattatgtg 27505271  T
Q  809 atttttacaaattattagctgtgtcggc 836  Q
    ||||||| ||||||||||||||||||||    
T  27505270 atttttaaaaattattagctgtgtcggc 27505243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 716 - 839
Target Start/End: Complemental strand, 28918120 - 28917995
Alignment:
Q  716 atgaagcacggtcacttctcggattaggtgtgtcccggtgacgtacacgtgtcgtgccc--gacaccgacacttgtaattacactgaattatgtgatttt 813  Q
    |||||||| || |||| || |||||||| ||||||| ||| || |||||||||||| ||  |||||||||||||||||||||||||||||||||||||||    
T  28918120 atgaagcagggacactccttggattaggcgtgtcccagtgtcggacacgtgtcgtgtccacgacaccgacacttgtaattacactgaattatgtgatttt 28918021  T
Q  814 tacaaattattagctgtgtcggcgtg 839  Q
    | ||||||||||||| ||||||||||    
T  28918020 ttcaaattattagctatgtcggcgtg 28917995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 712 - 834
Target Start/End: Original strand, 40993273 - 40993396
Alignment:
Q  712 acctatgaagcacggtcacttctcggattaggtgtgtcccggtgacgtacacgtgtcgtgcccgacaccgacacttgtaattacactgaattatgtga-t 810  Q
    |||||||||||| || |||| ||||||||||| ||||||||||| || ||| |||||||| ||||||||||||| | ||||||||||||||||||||| |    
T  40993273 acctatgaagcatggacactcctcggattaggcgtgtcccggtgtcggacatgtgtcgtgtccgacaccgacacatataattacactgaattatgtgatt 40993372  T
Q  811 ttttacaaattattagctgtgtcg 834  Q
    ||||  ||||||||||| ||||||    
T  40993373 ttttttaaattattagcggtgtcg 40993396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 712 - 836
Target Start/End: Original strand, 49651714 - 49651848
Alignment:
Q  712 acctatgaagcacggtcacttctcggattaggtgtgtcccggtgacgtacacgtgtcgtgcccg----------acaccgacacttgtaattacactgaa 801  Q
    ||||||||||||||| |||||||||||||||||||||||||||| || | | |||||||| |||          ||||||||||||||||||||| ||||    
T  49651714 acctatgaagcacggacacttctcggattaggtgtgtcccggtgtcggatatgtgtcgtgtccggtccgacacgacaccgacacttgtaattacagtgaa 49651813  T
Q  802 ttatgtgatttttacaaattattagctgtgtcggc 836  Q
    ||||||||||||| |||||||||||| ||||||||    
T  49651814 ttatgtgattttttcaaattattagccgtgtcggc 49651848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 714 - 839
Target Start/End: Complemental strand, 18427068 - 18426943
Alignment:
Q  714 ctatgaagcacggtcacttctcggattaggtgtgtcccggtgacgtacacgtgtcgtgcccgacaccgacacttgtaattacactgaattatgtgatttt 813  Q
    ||||||| ||||| |||| ||| ||||||||||||||||||| || |||||||||||  ||||||||||||  | ||||||||| |||||||||||||||    
T  18427068 ctatgaaacacggacactcctcagattaggtgtgtcccggtgccggacacgtgtcgtatccgacaccgacatatataattacaccgaattatgtgatttt 18426969  T
Q  814 tacaaattattagctgtgtcggcgtg 839  Q
    |  ||||||||||  |||||||||||    
T  18426968 ttgaaattattagtggtgtcggcgtg 18426943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 716 - 839
Target Start/End: Original strand, 4987222 - 4987356
Alignment:
Q  716 atgaagcacggtcacttctcggattaggtgtgtcccggtgacgtacacgtgtcgtgcccgacaccgacac-----------ttgtaattacactgaatta 804  Q
    |||||| |||| |||| ||||||||||| ||||||||||| || |||||||||||| || ||||||||||           |||||||||||||||||||    
T  4987222 atgaagtacggacactcctcggattaggcgtgtcccggtgtcggacacgtgtcgtgtccaacaccgacacgtcaccaacacttgtaattacactgaatta 4987321  T
Q  805 tgtgatttttacaaattattagctgtgtcggcgtg 839  Q
    |||||||||| ||||||||||||||||||||||||    
T  4987322 tgtgattttttcaaattattagctgtgtcggcgtg 4987356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 711 - 839
Target Start/End: Original strand, 26492142 - 26492270
Alignment:
Q  711 aacctatgaagcacggtcacttctcggattaggtgtgtcccggtgacgtacacgtgtcgtgcccgacaccgacacttgtaattacactgaattatgtgat 810  Q
    |||||||||||| ||| || | ||||||||||  |||||  |||| |  ||| |||||||| |||||||||| |||||||||||||||||||| | ||||    
T  26492142 aacctatgaagcgcggacattcctcggattagacgtgtcttggtgtcagacatgtgtcgtgtccgacaccgatacttgtaattacactgaattgtatgat 26492241  T
Q  811 ttttacaaattattagctgtgtcggcgtg 839  Q
    |||| ||||||||||||| ||||||||||    
T  26492242 tttttcaaattattagctctgtcggcgtg 26492270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 715 - 839
Target Start/End: Original strand, 15999951 - 16000081
Alignment:
Q  715 tatgaagcacggtcacttctcggattaggtgtgtcccggtgacgtacacgtgtcgtgc------ccgacaccgacacttgtaattacactgaattatgtg 808  Q
    ||||| |||||| |||| || |||||||| ||||||||||| || ||||||||||||       |||||||||||||||||| ||||||||||||||||     
T  15999951 tatgatgcacggacactccttggattaggcgtgtcccggtgtcggacacgtgtcgtgtacgtgtccgacaccgacacttgtagttacactgaattatgtt 16000050  T
Q  809 atttttacaaattattagctgtgtcggcgtg 839  Q
    ||||||  |||||||||| ||||||||||||    
T  16000051 atttttttaaattattagttgtgtcggcgtg 16000081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 714 - 833
Target Start/End: Original strand, 51206293 - 51206412
Alignment:
Q  714 ctatgaagcacggtcacttctcggattaggtgtgtcccggtgacgtacacgtgtcgtgcccgacaccgacacttgtaattacactgaattatgtgatttt 813  Q
    ||||||||||||| |||| || |||||||  || |||||||| || || ||    ||| |||||||||||||||||| ||||||||||||||||||||||    
T  51206293 ctatgaagcacggacactccttggattagaggtatcccggtgtcggacgcgacatgtgtccgacaccgacacttgtatttacactgaattatgtgatttt 51206392  T
Q  814 tacaaattattagctgtgtc 833  Q
    | ||||||||||||||||||    
T  51206393 ttcaaattattagctgtgtc 51206412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 773 - 839
Target Start/End: Complemental strand, 21479178 - 21479112
Alignment:
Q  773 ccgacaccgacacttgtaattacactgaattatgtgatttttacaaattattagctgtgtcggcgtg 839  Q
    |||||||||||||| |||||||||||||||| |||||||||| ||||||||||||||||||||||||    
T  21479178 ccgacaccgacactagtaattacactgaattgtgtgattttttcaaattattagctgtgtcggcgtg 21479112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 777 - 839
Target Start/End: Complemental strand, 26508166 - 26508104
Alignment:
Q  777 caccgacacttgtaattacactgaattatgtgatttttacaaattattagctgtgtcggcgtg 839  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||    
T  26508166 caccgacacttgtaattacactgaattatgtgattttttcaaattattagctgtgtcagcgtg 26508104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 716 - 839
Target Start/End: Complemental strand, 25775624 - 25775502
Alignment:
Q  716 atgaagcacggtcacttctcggattaggtgtgtcccggtgacgtacacgtgtcgtgcccgacaccgacacttgtaattacactgaattatgtgatt-ttt 814  Q
    ||||||||||  |||| ||||||||||| |||||| |||| || |||||   |||| ||||||||||||||||||||||||||||||||||||||| |||    
T  25775624 atgaagcacgaacactcctcggattaggcgtgtcctggtgtcggacacga--cgtgtccgacaccgacacttgtaattacactgaattatgtgattattt 25775527  T
Q  815 acaaattattagctgtgtcggcgtg 839  Q
     ||||||||||  ||||| ||||||    
T  25775526 tcaaattattaaatgtgttggcgtg 25775502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 774 - 839
Target Start/End: Complemental strand, 34910376 - 34910311
Alignment:
Q  774 cgacaccgacacttgtaattacactgaattatgtgatttttacaaattattagctgtgtcggcgtg 839  Q
    |||||||||| |||||||||||||||||||||||||||||| ||||||||||| ||||||||||||    
T  34910376 cgacaccgactcttgtaattacactgaattatgtgattttttcaaattattagttgtgtcggcgtg 34910311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 736 - 836
Target Start/End: Complemental strand, 7171598 - 7171499
Alignment:
Q  736 ggattaggtgtgtcccggtgacgtacacgtgtcgtgcccgacaccgacacttgtaattacactgaattatgtgatttttacaaattattagctgtgtcgg 835  Q
    |||||||| ||||| ||||| || |||||||||||| |||||||| |||||||||||||||| ||||||| |||||||| |||||||  |||||||||||    
T  7171598 ggattaggcgtgtcgcggtgtcggacacgtgtcgtgtccgacaccaacacttgtaattacaccgaattatatgattttt-caaattacaagctgtgtcgg 7171500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 763 - 839
Target Start/End: Original strand, 10335275 - 10335351
Alignment:
Q  763 cgtgtcgtgcccgacaccgacacttgtaattacactgaattatgtgatttttacaaattattagctgtgtcggcgtg 839  Q
    |||||||||||||||||||||||||||| ||||||| || ||||||| |||| ||||||||||| ||||||||||||    
T  10335275 cgtgtcgtgcccgacaccgacacttgtatttacactaaaatatgtgactttttcaaattattagttgtgtcggcgtg 10335351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 712 - 839
Target Start/End: Original strand, 41961577 - 41961715
Alignment:
Q  712 acctatgaagcacggtcacttctcggattaggtgtgtcccggtgacgtacacgtgtcgtg-----------cccgacaccgacacttgtaattacactga 800  Q
    ||||||||||||||| |||||||||||||||| ||||||| ||| || ||||||||||||           | |||||||||||||||||||||||| ||    
T  41961577 acctatgaagcacggacacttctcggattaggcgtgtcccagtgtcggacacgtgtcgtgtccgataccgacacgacaccgacacttgtaattacaccga 41961676  T
Q  801 attatgtgatttttacaaattattagctgtgtcggcgtg 839  Q
    || ||||||| ||| ||||||||||| |||| |||||||    
T  41961677 ataatgtgatattttcaaattattagttgtgacggcgtg 41961715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 774 - 833
Target Start/End: Complemental strand, 1509598 - 1509539
Alignment:
Q  774 cgacaccgacacttgtaattacactgaattatgtgatttttacaaattattagctgtgtc 833  Q
    ||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||    
T  1509598 cgacaccgacacttgtaattacactaaattatgtgattttttcaaattattagctgtgtc 1509539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 773 - 839
Target Start/End: Original strand, 8587020 - 8587086
Alignment:
Q  773 ccgacaccgacacttgtaattacactgaattatgtgatttttacaaattattagctgtgtcggcgtg 839  Q
    |||||||||||||||||||||||||| ||||||||||||||| ||||||| ||| ||||||||||||    
T  8587020 ccgacaccgacacttgtaattacacttaattatgtgattttttcaaattactagatgtgtcggcgtg 8587086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 714 - 839
Target Start/End: Original strand, 34185052 - 34185188
Alignment:
Q  714 ctatgaagcacggtcacttctcggattaggtgtgtcccggtgacgtacacgtgtcgtgcccgac-----------accgacacttgtaattacactgaat 802  Q
    ||||||||||||| |||| ||||||||||| ||||||||||| || |||| |||| || |||||           |||||||||||||||||||||||||    
T  34185052 ctatgaagcacggacactcctcggattaggcgtgtcccggtgtcggacacatgtcttgtccgacatggacacgacaccgacacttgtaattacactgaat 34185151  T
Q  803 tatgtgatttttacaaattattagctgtgtcggcgtg 839  Q
    | ||||||||||  ||||||||||| |||||||||||    
T  34185152 tgtgtgattttttgaaattattagccgtgtcggcgtg 34185188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 774 - 839
Target Start/End: Complemental strand, 14829748 - 14829684
Alignment:
Q  774 cgacaccgacacttgtaattacactgaattatgtgatttttacaaattattagctgtgtcggcgtg 839  Q
    ||||||||||||||||||||||  ||||||||||||||||| ||||||||||||||||||||||||    
T  14829748 cgacaccgacacttgtaattaccatgaattatgtgattttt-caaattattagctgtgtcggcgtg 14829684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 774 - 839
Target Start/End: Original strand, 15796294 - 15796359
Alignment:
Q  774 cgacaccgacacttgtaattacactgaattatgtgatttttacaaattattagctgtgtcggcgtg 839  Q
    ||||||||||| |||||||||||||||||||| |||||||| |||||||||| |||||||||||||    
T  15796294 cgacaccgacaattgtaattacactgaattatatgattttttcaaattattaactgtgtcggcgtg 15796359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 774 - 839
Target Start/End: Complemental strand, 28812574 - 28812509
Alignment:
Q  774 cgacaccgacacttgtaattacactgaattatgtgatttttacaaattattagctgtgtcggcgtg 839  Q
    |||||||||||||||||| |||||||||||||||||||| | ||||||||||| ||||||||||||    
T  28812574 cgacaccgacacttgtaactacactgaattatgtgatttcttcaaattattagttgtgtcggcgtg 28812509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 775 - 839
Target Start/End: Original strand, 10268487 - 10268551
Alignment:
Q  775 gacaccgacacttgtaattacactgaattatgtgatttttacaaattattagctgtgtcggcgtg 839  Q
    ||||| |||||||||||||||||| ||||||||||||||| |||||||||| |||||||||||||    
T  10268487 gacactgacacttgtaattacactaaattatgtgattttttcaaattattaactgtgtcggcgtg 10268551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 780 - 836
Target Start/End: Original strand, 35994744 - 35994799
Alignment:
Q  780 cgacacttgtaattacactgaattatgtgatttttacaaattattagctgtgtcggc 836  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  35994744 cgacacttgtaattacactgaattatgtgattttt-caaattattagctgtgtcggc 35994799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 768 - 835
Target Start/End: Complemental strand, 7928515 - 7928448
Alignment:
Q  768 cgtgcccgacaccgacacttgtaattacactgaattatgtgatttttacaaattattagctgtgtcgg 835  Q
    |||| ||||||||||||| | |||||||||||||||||||||||||| |||||||||||| |||||||    
T  7928515 cgtgtccgacaccgacacatataattacactgaattatgtgattttttcaaattattagcggtgtcgg 7928448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 768 - 839
Target Start/End: Complemental strand, 8383322 - 8383251
Alignment:
Q  768 cgtgcccgacaccgacacttgtaattacactgaattatgtgatttttacaaattattagctgtgtcggcgtg 839  Q
    |||| ||||||||||||||| ||||||||||||||||| |||||||  |||||||||||| |||||||||||    
T  8383322 cgtgtccgacaccgacacttataattacactgaattatatgattttctcaaattattagcggtgtcggcgtg 8383251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 715 - 835
Target Start/End: Original strand, 8789489 - 8789611
Alignment:
Q  715 tatgaagcacggtcacttctcggattaggtgtgtcccggtgacgtaca--cgtgtcgtgcccgacaccgacacttgtaattacactgaattatgtgattt 812  Q
    |||||||||||| |||| ||||||||||| ||||| ||||| |  |||   |||||||| ||||||||||||| | ||||||||| ||||||||||||||    
T  8789489 tatgaagcacggacactcctcggattaggcgtgtctcggtgtccgacatgtgtgtcgtgtccgacaccgacacatataattacacggaattatgtgattt 8789588  T
Q  813 ttacaaattattagctgtgtcgg 835  Q
    |  |||||||| ||| |||||||    
T  8789589 tctcaaattataagccgtgtcgg 8789611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 778 - 833
Target Start/End: Original strand, 21256990 - 21257045
Alignment:
Q  778 accgacacttgtaattacactgaattatgtgatttttacaaattattagctgtgtc 833  Q
    ||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||    
T  21256990 accgacacttgtaattatactgaattatgtgattttttcaaattattagctgtgtc 21257045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 714 - 827
Target Start/End: Complemental strand, 11252095 - 11251984
Alignment:
Q  714 ctatgaagcacggtcacttctcggattaggtgtgtcccggtgacgtacacgtgtcgtgcccgacaccgacacttgtaattacactgaattatgtgatttt 813  Q
    ||||||||||| | |||| ||||||||||| |||| ||| || || |||||||| ||| | ||||||||||| |  ||||||||||||||||||||||||    
T  11252095 ctatgaagcacagacactcctcggattaggcgtgttccgatgccggacacgtgttgtgtctgacaccgacacat--aattacactgaattatgtgatttt 11251998  T
Q  814 tacaaattattagc 827  Q
      ||||||||||||    
T  11251997 ctcaaattattagc 11251984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 774 - 839
Target Start/End: Complemental strand, 14832158 - 14832093
Alignment:
Q  774 cgacaccgacacttgtaattacactgaattatgtgatttttacaaattattagctgtgtcggcgtg 839  Q
    |||||| |||||||||||||||| ||| ||||||||||||| ||||||||||||||| ||||||||    
T  14832158 cgacactgacacttgtaattacattgagttatgtgattttttcaaattattagctgtatcggcgtg 14832093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 790 - 839
Target Start/End: Complemental strand, 14979224 - 14979175
Alignment:
Q  790 aattacactgaattatgtgatttttacaaattattagctgtgtcggcgtg 839  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  14979224 aattacactgaattatgtgattttttcaaattattagctgtgtcggcgtg 14979175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 714 - 839
Target Start/End: Complemental strand, 35223057 - 35222932
Alignment:
Q  714 ctatgaagcacggtcacttctcggattaggtgtgtcccggtgacgtacacgtgtcgtgcccgacaccgacacttgtaattacactgaattatgtgatttt 813  Q
    ||||||||||||| |||| ||||||| | | ||||||| ||| |  ||||||||| || ||||||||||||| | |||||||| ||||||||||||||||    
T  35223057 ctatgaagcacggacactcctcggataaagcgtgtccccgtgtcagacacgtgtcatgtccgacaccgacacatataattacattgaattatgtgatttt 35222958  T
Q  814 tacaaattattagctgtgtcggcgtg 839  Q
       ||| | |||| ||||||||||||    
T  35222957 ctaaaaatgttagttgtgtcggcgtg 35222932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 763 - 839
Target Start/End: Original strand, 10318024 - 10318099
Alignment:
Q  763 cgtgtcgtgcccgacaccgacacttgtaattacactgaattatgtgatttttacaaattattagctgtgtcggcgtg 839  Q
    ||||||||||||||||||||||||| || ||||||| ||  |||||| |||| ||||||||||||||||||||||||    
T  10318024 cgtgtcgtgcccgacaccgacacttatatttacact-aaaaatgtgactttttcaaattattagctgtgtcggcgtg 10318099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 716 - 839
Target Start/End: Original strand, 24204983 - 24205106
Alignment:
Q  716 atgaagcacggtcacttctcggattaggtgtgtcccggtgacgtacacgtgtc-gtgcccgacaccgacacttgtaattacactgaattatgtgattttt 814  Q
    ||||||||||| |||| |||| |||||| |||||| |||| || ||||| ||| ||| ||||||| ||||||| ||||||||||| ||||||| |||||     
T  24204983 atgaagcacggacactcctcgaattaggcgtgtcctggtgtcggacacgcgtcagtgtccgacac-gacacttataattacactgtattatgtcattttc 24205081  T
Q  815 acaaattattagctgtgtcggcgtg 839  Q
     |||||||||| | |||||||||||    
T  24205082 tcaaattattatccgtgtcggcgtg 24205106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 774 - 839
Target Start/End: Complemental strand, 14747621 - 14747555
Alignment:
Q  774 cgacaccgacacttgtaattacactgaattatgtgat-ttttacaaattattagctgtgtcggcgtg 839  Q
    |||||| ||| |||||||||||||| ||||||||||| |||| ||||||||||||||||||||||||    
T  14747621 cgacacggacccttgtaattacactaaattatgtgatttttttcaaattattagctgtgtcggcgtg 14747555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 774 - 836
Target Start/End: Original strand, 25948887 - 25948949
Alignment:
Q  774 cgacaccgacacttgtaattacactgaattatgtgatttttacaaattattagctgtgtcggc 836  Q
    ||||||| |||||| |||||||||||||||||||||||||| |||||||||||| || |||||    
T  25948887 cgacaccaacacttataattacactgaattatgtgattttttcaaattattagccgtatcggc 25948949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 782 - 839
Target Start/End: Original strand, 3164033 - 3164090
Alignment:
Q  782 acacttgtaattacactgaattatgtgatttttacaaattattagctgtgtcggcgtg 839  Q
    ||||||||  ||||||||||||||||||||||| ||||||||||||||||||| ||||    
T  3164033 acacttgttcttacactgaattatgtgattttttcaaattattagctgtgtcgacgtg 3164090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 773 - 833
Target Start/End: Complemental strand, 8593197 - 8593136
Alignment:
Q  773 ccgacaccgacacttgtaattacactgaattatgtgat-ttttacaaattattagctgtgtc 833  Q
    |||||||||||||||||||||| ||||||||||||||| |||| ||||||| ||||||||||    
T  8593197 ccgacaccgacacttgtaattatactgaattatgtgattttttccaaattagtagctgtgtc 8593136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 716 - 826
Target Start/End: Complemental strand, 29508567 - 29508451
Alignment:
Q  716 atgaagcacggtcacttctcggattaggtgtgtcccggtgacgtacacgtgtcgtgcccgacacc------gacacttgtaattacactgaattatgtga 809  Q
    ||||||||||| ||||||| |||||||  ||||||||||| || ||  |||||||| ||||||||      ||||| | ||||||||||||||||| |||    
T  29508567 atgaagcacggacacttcttggattagacgtgtcccggtgtcggacgtgtgtcgtgtccgacaccaacatcgacacatataattacactgaattatatga 29508468  T
Q  810 tttttacaaattattag 826  Q
    ||||| |||||||||||    
T  29508467 ttttttcaaattattag 29508451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 714 - 810
Target Start/End: Complemental strand, 23657858 - 23657762
Alignment:
Q  714 ctatgaagcacggtcacttctcggattaggtgtgtcccggtgacgtacacgtgtcgtgcccgacaccgacacttgtaattacactgaattatgtgat 810  Q
    |||||||| |||| ||||| |||||||||||||||||||||  || |||  |||| || |||||||||| | || ||||||||||||||||| ||||    
T  23657858 ctatgaagtacggacacttttcggattaggtgtgtcccggtatcggacaaatgtcatgtccgacaccgatatttataattacactgaattatatgat 23657762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 711 - 836
Target Start/End: Complemental strand, 55213095 - 55212960
Alignment:
Q  711 aacctatgaagcacggtcacttctcggattaggtgtgtcccggtgacgtacacgtgtcgtgcccgacaccg----------acacttgtaattacactga 800  Q
    |||||||| |||||||  |||||| |||||| | ||||| ||||| || |||||||| |||||||||||||          |||||||||||| |||| |    
T  55213095 aacctatgtagcacggatacttcttggattatgcgtgtctcggtgtcggacacgtgttgtgcccgacaccgacacacaccgacacttgtaattgcactaa 55212996  T
Q  801 attatgtgatttttacaaattattagctgtgtcggc 836  Q
    ||||||||||||||  ||||||||| ||||||||||    
T  55212995 attatgtgattttttaaaattattaactgtgtcggc 55212960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 760 - 814
Target Start/End: Complemental strand, 3865747 - 3865693
Alignment:
Q  760 acacgtgtcgtgcccgacaccgacacttgtaattacactgaattatgtgattttt 814  Q
    |||||||||||| | |||||||||||||||||||| |||||||||||||| ||||    
T  3865747 acacgtgtcgtgtcagacaccgacacttgtaattatactgaattatgtgagtttt 3865693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 781 - 839
Target Start/End: Complemental strand, 11610573 - 11610515
Alignment:
Q  781 gacacttgtaattacactgaattatgtgatttttacaaattattagctgtgtcggcgtg 839  Q
    ||||||||||| ||||||||||||||||||||||  ||||||||||| |||| ||||||    
T  11610573 gacacttgtaactacactgaattatgtgatttttttaaattattagcggtgttggcgtg 11610515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 714 - 838
Target Start/End: Complemental strand, 17276846 - 17276716
Alignment:
Q  714 ctatgaagcacggtcacttctcggattaggtgtgtcccggtgacgtacacgtgt--cgtgcccgacaccgacacttgtaattacactgaattatgtgatt 811  Q
    ||||||||||||| |||||||||||||||||| ||| ||||| || ||||||||  |   | |||||| |||||||||||||| ||  ||||||||| ||    
T  17276846 ctatgaagcacggacacttctcggattaggtgcgtctcggtgtcggacacgtgtcaccgacacgacactgacacttgtaattataccaaattatgtgttt 17276747  T
Q  812 t----ttacaaattattagctgtgtcggcgt 838  Q
    |    || || ||||||||||||||||||||    
T  17276746 ttttctttcagattattagctgtgtcggcgt 17276716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 774 - 839
Target Start/End: Original strand, 750618 - 750683
Alignment:
Q  774 cgacaccgacacttgtaattacactgaattatgtgatttttacaaattattagctgtgtcggcgtg 839  Q
    |||||||||||||||||||| ||  |||||||||||| ||| ||||||||||| ||||||| ||||    
T  750618 cgacaccgacacttgtaattgcagcgaattatgtgatattttcaaattattagttgtgtcgccgtg 750683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 774 - 835
Target Start/End: Original strand, 4990967 - 4991028
Alignment:
Q  774 cgacaccgacacttgtaattacactgaattatgtgatttttacaaattattagctgtgtcgg 835  Q
    |||| ||||||||||||||||||||||||||||| |||||  |||| ||||||| |||||||    
T  4990967 cgacgccgacacttgtaattacactgaattatgtaattttctcaaactattagcggtgtcgg 4991028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 798 - 839
Target Start/End: Complemental strand, 40052367 - 40052326
Alignment:
Q  798 tgaattatgtgatttttacaaattattagctgtgtcggcgtg 839  Q
    ||||||||||||||||| ||||||||||||||||||||||||    
T  40052367 tgaattatgtgattttttcaaattattagctgtgtcggcgtg 40052326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 721 - 809
Target Start/End: Complemental strand, 3631796 - 3631708
Alignment:
Q  721 gcacggtcacttctcggattaggtgtgtcccggtgacgtacacgtgtcgtgcccgacaccgacacttgtaattacactgaattatgtga 809  Q
    |||||| |||| |||||| |||| |||||| |||| || ||| |||||||| ||||||| | ||| | |||||||||||||||||||||    
T  3631796 gcacggacactcctcggactaggcgtgtcctggtgtcggacatgtgtcgtgtccgacactggcacatataattacactgaattatgtga 3631708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 771 - 827
Target Start/End: Complemental strand, 38731280 - 38731224
Alignment:
Q  771 gcccgacaccgacacttgtaattacactgaattatgtgatttttacaaattattagc 827  Q
    ||||||||||||||| | ||| ||||||||||||||||||||||  |||||||||||    
T  38731280 gcccgacaccgacacatataactacactgaattatgtgattttttaaaattattagc 38731224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 744 - 832
Target Start/End: Complemental strand, 45451642 - 45451554
Alignment:
Q  744 tgtgtcccggtgacgtacacgtgtcgtgcccgacaccgacacttgtaattacactgaattatgtgatttttacaaattattagctgtgt 832  Q
    |||||| ||||| || ||| |||||||| ||||||||||||| | | |||| |||||| |||||||||||  |||||||||||| ||||    
T  45451642 tgtgtctcggtgtcggacatgtgtcgtgtccgacaccgacacatattattatactgaagtatgtgattttctcaaattattagcagtgt 45451554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 714 - 813
Target Start/End: Original strand, 13845465 - 13845564
Alignment:
Q  714 ctatgaagcacggtcacttctcggattaggtgtgtcccggtgacgtacacgtgtcgtgcccgacaccgacacttgtaattacactgaattatgtgatttt 813  Q
    ||||||||||||| |||| || |||| ||| ||||| | ||| |  |||||| ||||| ||||||||||||| | ||||||||||| ||| |||||||||    
T  13845465 ctatgaagcacggacactccttggataaggcgtgtctccgtgtcagacacgtctcgtgtccgacaccgacacatataattacactgcattttgtgatttt 13845564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 764 - 839
Target Start/End: Complemental strand, 25093571 - 25093496
Alignment:
Q  764 gtgtcgtgcccgacaccgacacttgtaattacactgaattatgtgatttttacaaattattagctgtgtcggcgtg 839  Q
    |||| ||| ||||||||||||| | ||||||||||||||| |||||||||  ||||| |||| | |||||||||||    
T  25093571 gtgttgtgtccgacaccgacacatataattacactgaattgtgtgattttctcaaatcattaacagtgtcggcgtg 25093496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 780 - 839
Target Start/End: Original strand, 34307786 - 34307845
Alignment:
Q  780 cgacacttgtaattacactgaattatgtgatttttacaaattattagctgtgtcggcgtg 839  Q
    |||||||| ||||||||||||| |||||||||||  |||||||||||| ||||| |||||    
T  34307786 cgacacttataattacactgaaatatgtgattttctcaaattattagcggtgtcagcgtg 34307845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 776 - 826
Target Start/End: Original strand, 17005621 - 17005671
Alignment:
Q  776 acaccgacacttgtaattacactgaattatgtgatttttacaaattattag 826  Q
    |||||||||||| ||||||||||||||||| |||||||  |||||||||||    
T  17005621 acaccgacacttataattacactgaattatatgattttatcaaattattag 17005671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 789 - 839
Target Start/End: Complemental strand, 25064953 - 25064903
Alignment:
Q  789 taattacactgaattatgtgatttttacaaattattagctgtgtcggcgtg 839  Q
    |||||||||| ||||||||||||||| ||||| |||||| |||||||||||    
T  25064953 taattacactaaattatgtgattttttcaaatcattagcggtgtcggcgtg 25064903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 773 - 839
Target Start/End: Complemental strand, 33359821 - 33359755
Alignment:
Q  773 ccgacaccgacacttgtaattacactgaattatgtgatttttacaaattattagctgtgtcggcgtg 839  Q
    ||||||| |||||||||| ||||||| || |||||||  ||| |||||||||||||||||| |||||    
T  33359821 ccgacactgacacttgtatttacactaaaatatgtgaccttttcaaattattagctgtgtcagcgtg 33359755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 760 - 813
Target Start/End: Complemental strand, 2941631 - 2941578
Alignment:
Q  760 acacgtgtcgtgcccgacaccgacacttgtaattacactgaattatgtgatttt 813  Q
    |||||||||||| ||||||||||||| | ||||||||||| ||| |||||||||    
T  2941631 acacgtgtcgtgtccgacaccgacacatataattacactgtattttgtgatttt 2941578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 774 - 839
Target Start/End: Original strand, 8039835 - 8039900
Alignment:
Q  774 cgacaccgacacttgtaattacactgaattatgtgatttttacaaattattagctgtgtcggcgtg 839  Q
    |||||||||||| | ||||||||||||||||| | |||||  |||||||||||| |||| ||||||    
T  8039835 cgacaccgacacatataattacactgaattatataattttctcaaattattagcggtgttggcgtg 8039900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 774 - 839
Target Start/End: Complemental strand, 9800099 - 9800034
Alignment:
Q  774 cgacaccgacacttgtaattacactgaattatgtgatttttacaaattattagctgtgtcggcgtg 839  Q
    ||||||||||||||  |||||||| ||||||||| |||||  |||||||||||  |||||||||||    
T  9800099 cgacaccgacacttacaattacacggaattatgtaattttctcaaattattagaggtgtcggcgtg 9800034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 768 - 839
Target Start/End: Original strand, 32400702 - 32400770
Alignment:
Q  768 cgtgcccgacaccgacacttgtaattacactgaattatgtgatttttacaaattattagctgtgtcggcgtg 839  Q
    |||| ||||||| ||||||||||||||||   |||||||| || ||| ||||||||||||||||||| ||||    
T  32400702 cgtgtccgacacggacacttgtaattaca---aattatgtaatcttttcaaattattagctgtgtcgccgtg 32400770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 774 - 839
Target Start/End: Complemental strand, 39756295 - 39756230
Alignment:
Q  774 cgacaccgacacttgtaattacactgaattatgtgatttttacaaattattagctgtgtcggcgtg 839  Q
    ||||||||||||||||||||| | | |||||||||||||||  |||||||||  | ||||||||||    
T  39756295 cgacaccgacacttgtaattatattaaattatgtgatttttttaaattattaattttgtcggcgtg 39756230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 708 - 765
Target Start/End: Complemental strand, 40052437 - 40052380
Alignment:
Q  708 cataacctatgaagcacggtcacttctcggattaggtgtgtcccggtgacgtacacgt 765  Q
    ||||||||||||||||||  |||| ||||||||||| ||||||||||| || ||||||    
T  40052437 cataacctatgaagcacgaacactcctcggattaggcgtgtcccggtgtcggacacgt 40052380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 710 - 755
Target Start/End: Complemental strand, 52369910 - 52369865
Alignment:
Q  710 taacctatgaagcacggtcacttctcggattaggtgtgtcccggtg 755  Q
    ||||||||||||||||| |||| |||||| ||||||||||||||||    
T  52369910 taacctatgaagcacggacactcctcggaataggtgtgtcccggtg 52369865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 779 - 839
Target Start/End: Complemental strand, 1514671 - 1514611
Alignment:
Q  779 ccgacacttgtaattacactgaattatgtgatttttacaaattattagctgtgtcggcgtg 839  Q
    ||||||||| |||||||||| ||||||| | || || |||||||||||| |||||||||||    
T  1514671 ccgacacttataattacactaaattatgcgtttctttcaaattattagcggtgtcggcgtg 1514611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 774 - 838
Target Start/End: Complemental strand, 1550199 - 1550135
Alignment:
Q  774 cgacaccgacacttgtaattacactgaattatgtgatttttacaaattattagctgtgtcggcgt 838  Q
    |||||| ||||| | ||||||||||||||  |||||||||| |||||||||||| |||| |||||    
T  1550199 cgacactgacacctataattacactgaatagtgtgattttttcaaattattagcggtgttggcgt 1550135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 775 - 839
Target Start/End: Complemental strand, 3610691 - 3610627
Alignment:
Q  775 gacaccgacacttgtaattacactgaattatgtgatttttacaaattattagctgtgtcggcgtg 839  Q
    |||| ||||||| ||||||||||||| |||||| ||||||  ||||||||| |||||| ||||||    
T  3610691 gacaacgacactggtaattacactgagttatgttatttttttaaattattaactgtgttggcgtg 3610627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 93 - 128
Target Start/End: Complemental strand, 14202563 - 14202528
Alignment:
Q  93 tgagtgatagaatttaccttaactgaggaggatttt 128  Q
    |||||||||||||||||||||||| |||||||||||    
T  14202563 tgagtgatagaatttaccttaacttaggaggatttt 14202528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 774 - 825
Target Start/End: Complemental strand, 16789071 - 16789020
Alignment:
Q  774 cgacaccgacacttgtaattacactgaattatgtgatttttacaaattatta 825  Q
    ||||||| |||||| ||||||||||||||||| ||||||||  |||||||||    
T  16789071 cgacaccaacacttataattacactgaattatatgatttttttaaattatta 16789020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 768 - 827
Target Start/End: Original strand, 49505148 - 49505207
Alignment:
Q  768 cgtgcccgacaccgacacttgtaattacactgaattatgtgatttttacaaattattagc 827  Q
    |||| ||||||| ||||| | |||||||||| ||||||||||||||  ||||||||||||    
T  49505148 cgtgtccgacactgacacatataattacactaaattatgtgattttctcaaattattagc 49505207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 789 - 839
Target Start/End: Original strand, 5407262 - 5407312
Alignment:
Q  789 taattacactgaattatgtgatttttacaaattattagctgtgtcggcgtg 839  Q
    |||||||| ||||||||||||||||  |||||| ||||| |||||||||||    
T  5407262 taattacaatgaattatgtgattttctcaaatttttagcggtgtcggcgtg 5407312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 789 - 835
Target Start/End: Original strand, 11313815 - 11313861
Alignment:
Q  789 taattacactgaattatgtgatttttacaaattattagctgtgtcgg 835  Q
    |||||||||| ||||||||||||||  |||||||||||| |||||||    
T  11313815 taattacactaaattatgtgattttctcaaattattagcagtgtcgg 11313861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 789 - 839
Target Start/End: Complemental strand, 12704051 - 12704001
Alignment:
Q  789 taattacactgaattatgtgatttttacaaattattagctgtgtcggcgtg 839  Q
    |||||||||||||||||||| ||||  |||||||||||  |||||||||||    
T  12704051 taattacactgaattatgtgcttttctcaaattattagtggtgtcggcgtg 12704001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 745 - 819
Target Start/End: Original strand, 14338454 - 14338528
Alignment:
Q  745 gtgtcccggtgacgtacacgtgtcgtgcccgacaccgacacttgtaattacactgaattatgtgatttttacaaa 819  Q
    ||||||||||| |  | |||||||||| | |||||||||| |||| |||||| |||||||||| |||||| ||||    
T  14338454 gtgtcccggtgtccgatacgtgtcgtgtctgacaccgacatttgtgattacattgaattatgtcattttttcaaa 14338528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 789 - 839
Target Start/End: Original strand, 23870574 - 23870624
Alignment:
Q  789 taattacactgaattatgtgatttttacaaattattagctgtgtcggcgtg 839  Q
    |||| |||||||||||| |||||||| |||||||||||| |||||| ||||    
T  23870574 taatcacactgaattatatgattttttcaaattattagcggtgtcgacgtg 23870624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 776 - 814
Target Start/End: Original strand, 30184108 - 30184146
Alignment:
Q  776 acaccgacacttgtaattacactgaattatgtgattttt 814  Q
    |||||||||| ||||||||||||||||||||| ||||||    
T  30184108 acaccgacacatgtaattacactgaattatgtcattttt 30184146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #82
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 714 - 755
Target Start/End: Original strand, 3730108 - 3730149
Alignment:
Q  714 ctatgaagcacggtcacttctcggattaggtgtgtcccggtg 755  Q
    |||||||||| || |||| |||||||||||||||||||||||    
T  3730108 ctatgaagcatggacactcctcggattaggtgtgtcccggtg 3730149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #83
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 774 - 835
Target Start/End: Original strand, 7614415 - 7614476
Alignment:
Q  774 cgacaccgacacttgtaattacactgaattatgtgatttttacaaattattagctgtgtcgg 835  Q
    |||||||||||  | |||||| ||||||||||||||||||   ||||||||| |||||||||    
T  7614415 cgacaccgacatatataattatactgaattatgtgattttcttaaattattaactgtgtcgg 7614476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #84
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 774 - 827
Target Start/End: Complemental strand, 11666003 - 11665950
Alignment:
Q  774 cgacaccgacacttgtaattacactgaattatgtgatttttacaaattattagc 827  Q
    |||||||||||| | |||||||||| |||| |||||||||  ||||||||||||    
T  11666003 cgacaccgacacatataattacactaaattgtgtgattttatcaaattattagc 11665950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #85
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 710 - 755
Target Start/End: Complemental strand, 14979272 - 14979227
Alignment:
Q  710 taacctatgaagcacggtcacttctcggattaggtgtgtcccggtg 755  Q
    ||||||||||||||||| |||| ||||| ||||| |||||||||||    
T  14979272 taacctatgaagcacggacactcctcgggttaggcgtgtcccggtg 14979227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #86
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 715 - 839
Target Start/End: Complemental strand, 15864950 - 15864827
Alignment:
Q  715 tatgaagcacggtcacttctcggattaggtgtgtcccggtgacgtacacgtgtcg-tgcccgacaccgacacttgtaattacactgaattatgtgatttt 813  Q
    |||||||||||| ||||  | |||||||| |||||||| || |  |||||||||| || ||||||| ||||| | | |||||||| |||||| | |||||    
T  15864950 tatgaagcacggacactctttggattaggcgtgtcccg-tgtcagacacgtgtcggtgtccgacac-gacacctatgattacactaaattatatcatttt 15864853  T
Q  814 tacaaattattagctgtgtcggcgtg 839  Q
    | |||||||||| | |||||||||||    
T  15864852 ttcaaattattatccgtgtcggcgtg 15864827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #87
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 782 - 835
Target Start/End: Complemental strand, 21861620 - 21861567
Alignment:
Q  782 acacttgtaattacactgaattatgtgatttttacaaattattagctgtgtcgg 835  Q
    |||||| | ||||||||||||||||| |||||| |||||| ||| |||||||||    
T  21861620 acacttatgattacactgaattatgtcatttttccaaattgttatctgtgtcgg 21861567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 94; Significance: 2e-45; HSPs: 89)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 714 - 839
Target Start/End: Complemental strand, 34595253 - 34595128
Alignment:
Q  714 ctatgaagcacggtcacttctcggattaggtgtgtcccggtgacgtacacgtgtcgtgcccgacaccgacacttgtaattacactgaattatgtgatttt 813  Q
    ||||||||||||| |||| ||||||||||||||||||||||| |  |||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  34595253 ctatgaagcacggacactcctcggattaggtgtgtcccggtgtcagacacgtgtcgtgtccgacaccgacacttgtaattacactgaattatgtgatttt 34595154  T
Q  814 tacaaattattagctgtgtcggcgtg 839  Q
    | ||||||||||| ||||||||||||    
T  34595153 ttcaaattattagttgtgtcggcgtg 34595128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 714 - 839
Target Start/End: Complemental strand, 28152217 - 28152093
Alignment:
Q  714 ctatgaagcacggtcacttctcggattaggtgtgtcccggtgacgtacacgtgtcgtgcccgacaccgacacttgtaattacactgaattatgtgatttt 813  Q
    ||||||||||||  |||| |||||||||||  |||||||||| || |||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  28152217 ctatgaagcacgaacactcctcggattaggcctgtcccggtgtcggacacgtgtcgtgtccgacaccgacacttgtaattacactgaattatgtgatttt 28152118  T
Q  814 tacaaattattagctgtgtcggcgtg 839  Q
    | ||||||||||||| ||||||||||    
T  28152117 t-caaattattagctttgtcggcgtg 28152093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 712 - 833
Target Start/End: Complemental strand, 28715416 - 28715295
Alignment:
Q  712 acctatgaagcacggtcacttctcggattaggtgtgtcccggtgacgtacacgtgtcgtgcccgacaccgacacttgtaattacactgaattatgtgatt 811  Q
    ||||||||||||||  ||||||||| |||||| ||||||||||| || |||||||||||| ||||||||||||||||||||||||||||||||||| |||    
T  28715416 acctatgaagcacgtacacttctcgaattaggcgtgtcccggtgtcgaacacgtgtcgtgtccgacaccgacacttgtaattacactgaattatgtcatt 28715317  T
Q  812 tttacaaattattagctgtgtc 833  Q
    ||| |||||||||||| |||||    
T  28715316 ttttcaaattattagccgtgtc 28715295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 715 - 839
Target Start/End: Original strand, 17841530 - 17841654
Alignment:
Q  715 tatgaagcacggtcacttctcggattaggtgtgtcccggtgacgtacacgtgtcgtgcccgacaccgacacttgtaattacactgaattatgtgattttt 814  Q
    |||||||||||| |||| ||||||||||| ||||| | ||| || |||| ||||||| ||||||||| |||||||||||||||| |||||||||||||||    
T  17841530 tatgaagcacggacactcctcggattaggcgtgtctcagtgtcggacacatgtcgtgtccgacaccgtcacttgtaattacactaaattatgtgattttt 17841629  T
Q  815 acaaattattagctgtgtcggcgtg 839  Q
     ||||||||||||||||||||||||    
T  17841630 tcaaattattagctgtgtcggcgtg 17841654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 711 - 839
Target Start/End: Original strand, 8776905 - 8777038
Alignment:
Q  711 aacctatgaagcacggtcacttctcggattaggtgtgtcccggtgacgtacacgtgtcgtgcc-----cgacaccgacacttgtaattacactgaattat 805  Q
    |||||||||||||||| |||| ||||||||||||||||| ||||| || |||||||||||| |     ||||||| |||||||||||||||||||||| |    
T  8776905 aacctatgaagcacggacactcctcggattaggtgtgtctcggtgtcggacacgtgtcgtgtcgtgtccgacaccaacacttgtaattacactgaatttt 8777004  T
Q  806 gtgatttttacaaattattagctgtgtcggcgtg 839  Q
    ||||||||| ||||||||||| ||||||||||||    
T  8777005 gtgattttttcaaattattagttgtgtcggcgtg 8777038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 717 - 839
Target Start/End: Original strand, 32978842 - 32978965
Alignment:
Q  717 tgaagcacggtcacttctcggattaggtgtgtcccggtgacgtacacgtgtcgtgcccgacaccgacacttgtaattacactgaattatgtg-attttta 815  Q
    |||||||||| |||| || |||||||  ||||||||||| || ||| |||||||| |||||||||||||||||||||||||| |||||||||  |||||     
T  32978842 tgaagcacggacactccttggattagacgtgtcccggtgtcggacatgtgtcgtgtccgacaccgacacttgtaattacacttaattatgtgtttttttt 32978941  T
Q  816 caaattattagctgtgtcggcgtg 839  Q
    ||||||||||||||||||||||||    
T  32978942 caaattattagctgtgtcggcgtg 32978965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 713 - 839
Target Start/End: Complemental strand, 16833428 - 16833302
Alignment:
Q  713 cctatgaagcacggtcacttctcggattaggtgtgtcccggtgacgtacacgtgtcgtgcccgacaccgacacttgtaattacactgaattatgtgattt 812  Q
    ||||||||| || | |||| |||||||| ||||||||| |||| || || ||||||||| |  |||||||||||||||||||||||||| ||||||||||    
T  16833428 cctatgaagtacagacactcctcggattcggtgtgtcctggtgtcggacgcgtgtcgtgtctaacaccgacacttgtaattacactgaagtatgtgattt 16833329  T
Q  813 ttacaaattattagctgtgtcggcgtg 839  Q
    || ||||||||||| ||||||||||||    
T  16833328 tttcaaattattagttgtgtcggcgtg 16833302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 712 - 835
Target Start/End: Complemental strand, 4878063 - 4877940
Alignment:
Q  712 acctatgaagcacggtcacttctcggattaggtgtgtcccggtgacgtacacgtgtcgtgcccgacaccgacacttgtaattacactgaattatgtga-t 810  Q
    ||||||||||||||| |||| ||||||||||| |||||| | || || ||| |||||||| |||||||||||||||||||||| ||| |||||||||| |    
T  4878063 acctatgaagcacggacactcctcggattaggcgtgtcctg-tgtcggacatgtgtcgtgtccgacaccgacacttgtaattatacttaattatgtgact 4877965  T
Q  811 ttttacaaattattagctgtgtcgg 835  Q
    |||| ||||||||||||||||||||    
T  4877964 tttttcaaattattagctgtgtcgg 4877940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 774 - 839
Target Start/End: Complemental strand, 16766756 - 16766691
Alignment:
Q  774 cgacaccgacacttgtaattacactgaattatgtgatttttacaaattattagctgtgtcggcgtg 839  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  16766756 cgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctgtgtcggcgtg 16766691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 716 - 839
Target Start/End: Complemental strand, 12696446 - 12696318
Alignment:
Q  716 atgaagcacggtcacttctcggattaggtgtgtcccggtgacgtacacgtgtcgtgcccgacacc-----gacacttgtaattacactgaattatgtgat 810  Q
    ||||||||| | |||| || |||| ||||||||||||||| |  |||||||||||| |||||||      ||||||||||||||||||||||||||| ||    
T  12696446 atgaagcacagacactccttggataaggtgtgtcccggtgtcagacacgtgtcgtgtccgacacgacactgacacttgtaattacactgaattatgtaat 12696347  T
Q  811 ttttacaaattattagctgtgtcggcgtg 839  Q
    |||| ||||||||||||||||||||||||    
T  12696346 tttttcaaattattagctgtgtcggcgtg 12696318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 715 - 839
Target Start/End: Complemental strand, 31959268 - 31959153
Alignment:
Q  715 tatgaagcacggtcacttctcggattaggtgtgtcccggtgacgtacacgtgtcgtgcccgacaccgacacttgtaattacactgaattatgtgattttt 814  Q
    |||||||||||| |||| ||||||||||||||||||||||| || |||| |||||         ||||||||||||||||||||| ||||||||||||||    
T  31959268 tatgaagcacggacactcctcggattaggtgtgtcccggtgtcggacacatgtcg---------ccgacacttgtaattacactgcattatgtgattttt 31959178  T
Q  815 acaaattattagctgtgtcggcgtg 839  Q
     |||||||||||||||| |||||||    
T  31959177 tcaaattattagctgtgacggcgtg 31959153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 773 - 839
Target Start/End: Original strand, 7977829 - 7977895
Alignment:
Q  773 ccgacaccgacacttgtaattacactgaattatgtgatttttacaaattattagctgtgtcggcgtg 839  Q
    ||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||    
T  7977829 ccgacaccgacacttgtaattacactgaattatgtaattttttcaaattattagctgtgtcggcgtg 7977895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 714 - 839
Target Start/End: Original strand, 9107299 - 9107435
Alignment:
Q  714 ctatgaagcacggtcacttctcggattaggtgtgtcccggtgacgtacacgtgtcgtgcccgac-----------accgacacttgtaattacactgaat 802  Q
    ||||||||||||| |||| ||||||||||||||||||||||| || ||||  || ||| |||||           |||||||||||||||||||||||||    
T  9107299 ctatgaagcacgggcactcctcggattaggtgtgtcccggtgtcggacacacgttgtgtccgacaccgacacgacaccgacacttgtaattacactgaat 9107398  T
Q  803 tatgtgatttttacaaattattagctgtgtcggcgtg 839  Q
    | |||||||||| ||||||||||||||||||||||||    
T  9107399 tttgtgattttttcaaattattagctgtgtcggcgtg 9107435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 772 - 839
Target Start/End: Original strand, 7801154 - 7801221
Alignment:
Q  772 cccgacaccgacacttgtaattacactgaattatgtgatttttacaaattattagctgtgtcggcgtg 839  Q
    |||||||||||||||||||||||| |||||||||||||||||| ||||||||||| ||||||||||||    
T  7801154 cccgacaccgacacttgtaattacgctgaattatgtgattttttcaaattattagttgtgtcggcgtg 7801221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 733 - 837
Target Start/End: Original strand, 1191662 - 1191763
Alignment:
Q  733 ctcggattaggtgtgtcccggtgacgtacacgtgtcgtgcccgacaccgacacttgtaattacactgaattatgtgatttttacaaattattagctgtgt 832  Q
    ||||||||||||||||   |||| || ||||| |||||| || ||| |||||||||||||||||||||||| ||||| |||| |||||||||||||||||    
T  1191662 ctcggattaggtgtgt---ggtgtcggacacgcgtcgtgtccaacatcgacacttgtaattacactgaattttgtgaatttttcaaattattagctgtgt 1191758  T
Q  833 cggcg 837  Q
    |||||    
T  1191759 cggcg 1191763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 714 - 835
Target Start/End: Complemental strand, 7378098 - 7377977
Alignment:
Q  714 ctatgaagcacggtcacttctcggattaggtgtgtcccggtgacgtacacgtgtcgtgcccgacaccgacacttgtaattacactgaattatgtgatttt 813  Q
    ||||||||||||| |||||||| ||||||  ||||||||||| || |  | ||||||| ||||||||||||| | |||||||| ||||||||||||||||    
T  7378098 ctatgaagcacggacacttctcagattagccgtgtcccggtgtcggatgcatgtcgtgtccgacaccgacacatataattacattgaattatgtgatttt 7377999  T
Q  814 tacaaattattagctgtgtcgg 835  Q
      |||||| ||||| |||||||    
T  7377998 ctcaaatttttagcggtgtcgg 7377977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 711 - 839
Target Start/End: Original strand, 8365445 - 8365584
Alignment:
Q  711 aacctatgaagcacggtcacttctcggattaggtgtgtcccggtgacgtacacgtgtcgtgcccga-----------caccgacacttgtaattacactg 799  Q
    ||||||||||||||||  ||| ||||||||||| ||||||| ||| || |||||||||||| ||||           ||||||||||||||||||||| |    
T  8365445 aacctatgaagcacggagactcctcggattaggcgtgtcccagtgtcggacacgtgtcgtgtccgataccgacacgacaccgacacttgtaattacaccg 8365544  T
Q  800 aattatgtgatttttacaaattattagctgtgtcggcgtg 839  Q
    ||||||||||| ||| ||||||||||| ||||||||||||    
T  8365545 aattatgtgatattttcaaattattagttgtgtcggcgtg 8365584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 774 - 839
Target Start/End: Original strand, 10770674 - 10770739
Alignment:
Q  774 cgacaccgacacttgtaattacactgaattatgtgatttttacaaattattagctgtgtcggcgtg 839  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||| ||||||    
T  10770674 cgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagttgtgttggcgtg 10770739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 714 - 834
Target Start/End: Complemental strand, 24645600 - 24645479
Alignment:
Q  714 ctatgaagcacggtcacttctcggattaggtgtgtcccggtgacgtacacgtgtcgtgcccgacaccgacacttgtaattacactgaattatgtgat-tt 812  Q
    ||||||||||| | ||||  |||||||||  |||||  |||| || |||||||||||| | ||||||||||||||||| || ||||||||||||||| ||    
T  24645600 ctatgaagcacagacactcttcggattagacgtgtcttggtgtcggacacgtgtcgtgtctgacaccgacacttgtaactatactgaattatgtgatttt 24645501  T
Q  813 ttacaaattattagctgtgtcg 834  Q
    || |||||||||||||||||||    
T  24645500 tttcaaattattagctgtgtcg 24645479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 768 - 839
Target Start/End: Original strand, 426508 - 426579
Alignment:
Q  768 cgtgcccgacaccgacacttgtaattacactgaattatgtgatttttacaaattattagctgtgtcggcgtg 839  Q
    |||| |||||||||||||||||||||||| | ||||||||||||||| |||||||||| |||||||||||||    
T  426508 cgtgtccgacaccgacacttgtaattacatttaattatgtgattttttcaaattattaactgtgtcggcgtg 426579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 760 - 839
Target Start/End: Original strand, 853845 - 853924
Alignment:
Q  760 acacgtgtcgtgcccgacaccgacacttgtaattacactgaattatgtgatttttacaaattattagctgtgtcggcgtg 839  Q
    |||| ||||||  ||||||||||||||||||||| |||| ||||||||||||||| ||||||||||| ||||||||||||    
T  853845 acacatgtcgtatccgacaccgacacttgtaattgcacttaattatgtgattttttcaaattattagttgtgtcggcgtg 853924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 760 - 839
Target Start/End: Original strand, 33001275 - 33001354
Alignment:
Q  760 acacgtgtcgtgcccgacaccgacacttgtaattacactgaattatgtgatttttacaaattattagctgtgtcggcgtg 839  Q
    |||||||||||| ||||||||||||| | |||||||| | ||||||||||||||| |||||||||||| |||||||||||    
T  33001275 acacgtgtcgtgtccgacaccgacacatataattacatttaattatgtgattttttcaaattattagcagtgtcggcgtg 33001354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 775 - 839
Target Start/End: Complemental strand, 7938174 - 7938110
Alignment:
Q  775 gacaccgacacttgtaattacactgaattatgtgatttttacaaattattagctgtgtcggcgtg 839  Q
    ||||||||||||| |||||||||| |||||| |||||||| ||||||||||||||||||||||||    
T  7938174 gacaccgacacttataattacactaaattatatgattttttcaaattattagctgtgtcggcgtg 7938110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 735 - 839
Target Start/End: Complemental strand, 19040450 - 19040346
Alignment:
Q  735 cggattaggtgtgtcccggtgacgtacacgtgtcgtgcccgacaccgacacttgtaattacactgaattatgtgatttttacaaattattagctgtgtcg 834  Q
    |||||||||||||||||   |  | ||| |||||||| ||||||| ||||| | |||||||||||||||||||||||||  |||||||||||| ||||||    
T  19040450 cggattaggtgtgtcccaaagttgaacatgtgtcgtgtccgacacagacacatataattacactgaattatgtgattttctcaaattattagcggtgtcg 19040351  T
Q  835 gcgtg 839  Q
    |||||    
T  19040350 gcgtg 19040346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 780 - 839
Target Start/End: Complemental strand, 1681811 - 1681752
Alignment:
Q  780 cgacacttgtaattacactgaattatgtgatttttacaaattattagctgtgtcggcgtg 839  Q
    ||||||||||||||||||||||||| ||||||||| ||||||||||| ||||||||||||    
T  1681811 cgacacttgtaattacactgaattacgtgattttttcaaattattagttgtgtcggcgtg 1681752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 773 - 839
Target Start/End: Complemental strand, 3209442 - 3209375
Alignment:
Q  773 ccgacaccgacacttgtaattacactgaattatgtgat-ttttacaaattattagctgtgtcggcgtg 839  Q
    |||||||||||||||||||| ||||| ||||||||||| |||| ||||||||||||||||||||||||    
T  3209442 ccgacaccgacacttgtaataacactaaattatgtgatttttttcaaattattagctgtgtcggcgtg 3209375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 716 - 839
Target Start/End: Original strand, 7265535 - 7265658
Alignment:
Q  716 atgaagcacggtcacttctcggattaggtgtgtcccggtgacgtacacgtgtcgtgcccgacaccgacacttgtaattacactgaattatgtgattttta 815  Q
    ||||||||||| | || |||||||||||  | | |||||| || ||| || | ||| ||||||||||||| | |||||||||||||||||||||||||      
T  7265535 atgaagcacggacgctcctcggattaggcatattccggtgtcggacatgtattgtgtccgacaccgacacatataattacactgaattatgtgattttct 7265634  T
Q  816 caaattattagctgtgtcggcgtg 839  Q
    |||||||||||| |||| ||||||    
T  7265635 caaattattagcggtgttggcgtg 7265658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 713 - 839
Target Start/End: Original strand, 6898220 - 6898346
Alignment:
Q  713 cctatgaagcacggtcacttctcggattaggtgtgtcccggtgacgtacacgtgtcgtgcccgacaccgacacttgtaattacactgaattatgtgattt 812  Q
    |||||||||||||  ||||  |||||||||| ||||  |||||  | |||||  ||||| |||||||||||||||||||||||||| |||||||| ||||    
T  6898220 cctatgaagcacgaacactcatcggattaggcgtgtttcggtgttggacacgcttcgtgtccgacaccgacacttgtaattacacttaattatgtaattt 6898319  T
Q  813 ttacaaattattagctgtgtcggcgtg 839  Q
     | |||||||||||  ||||| |||||    
T  6898320 gttcaaattattagacgtgtcagcgtg 6898346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 715 - 826
Target Start/End: Complemental strand, 31385048 - 31384927
Alignment:
Q  715 tatgaagcacggtcacttctcggattaggtgtgtcccggtgacgtacacgtgtcgtgccc----------gacaccgacacttgtaattacactgaatta 804  Q
    |||||||||||| |||| || |||||||| |||||||||||  | |||||||||||| ||          ||||| ||||||||||||||||||||||||    
T  31385048 tatgaagcacggacactccttggattaggcgtgtcccggtgtaggacacgtgtcgtgtccaacactacacgacactgacacttgtaattacactgaatta 31384949  T
Q  805 tgtgatttttacaaattattag 826  Q
    |||||||||| |||||||||||    
T  31384948 tgtgattttttcaaattattag 31384927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 774 - 839
Target Start/End: Complemental strand, 3398677 - 3398613
Alignment:
Q  774 cgacaccgacacttgtaattacactgaattatgtgatttttacaaattattagctgtgtcggcgtg 839  Q
    ||||||||| |||| ||||||||||||||||| |||||||| ||||||||||||||||||||||||    
T  3398677 cgacaccgatacttataattacactgaattatatgattttt-caaattattagctgtgtcggcgtg 3398613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 774 - 839
Target Start/End: Original strand, 5970108 - 5970173
Alignment:
Q  774 cgacaccgacacttgtaattacactgaattatgtgatttttacaaattattagctgtgtcggcgtg 839  Q
    ||||||| ||| ||||||||||||||||||||||||||||| |||||||||| |||||||| ||||    
T  5970108 cgacacccacatttgtaattacactgaattatgtgattttttcaaattattaactgtgtcgacgtg 5970173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 715 - 839
Target Start/End: Complemental strand, 9658998 - 9658873
Alignment:
Q  715 tatgaagcacggtcacttctcgga-ttaggtgtgtcccggtgacgtacacgtgtcgtgcccgacaccgacacttgtaattacactgaattatgtgatttt 813  Q
    |||||||||||| |||| || ||| ||||| |||| |||||| |  |||||||||||| |  |||||||||  | |||||||||||||||||||||||||    
T  9658998 tatgaagcacggacactccttggaattaggcgtgttccggtgtcagacacgtgtcgtgtctaacaccgacaaatataattacactgaattatgtgatttt 9658899  T
Q  814 tacaaattattagctgtgtcggcgtg 839  Q
       ||||||||||| |||||||||||    
T  9658898 cttaaattattagcggtgtcggcgtg 9658873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 774 - 832
Target Start/End: Original strand, 9911528 - 9911587
Alignment:
Q  774 cgacaccgacacttgtaattacactgaattatgtgattt-ttacaaattattagctgtgt 832  Q
    ||||||||||||||||||||||||||||||||||||||| ||  ||||||||||||||||    
T  9911528 cgacaccgacacttgtaattacactgaattatgtgatttcttttaaattattagctgtgt 9911587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 731 - 826
Target Start/End: Original strand, 12627534 - 12627629
Alignment:
Q  731 ttctcggattaggtgtgtcccggtgacgtacacgtgtcgtgcccgacaccgacacttgtaattacactgaattatgtgatttttacaaattattag 826  Q
    ||||||||||||| ||||| ||||| || ||| |||| ||| |||||| |||||| | | |||||||||||||||||||||||| || ||||||||    
T  12627534 ttctcggattaggagtgtctcggtgtcggacatgtgtggtgtccgacatcgacacatattattacactgaattatgtgattttttcacattattag 12627629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 717 - 833
Target Start/End: Original strand, 9025448 - 9025553
Alignment:
Q  717 tgaagcacggtcacttctcggattaggtgtgtcccggtgacgtacacgtgtcgtgcccgacaccgacacttgtaattacactgaattatgtgatttttac 816  Q
    |||||||||| |||||||||||||||| ||||||||||| || |||||           |||||||||| | |||||||||||||||||||||||||  |    
T  9025448 tgaagcacggacacttctcggattaggcgtgtcccggtgtcggacacg-----------acaccgacacatataattacactgaattatgtgattttctc 9025536  T
Q  817 aaattattagctgtgtc 833  Q
    ||||||||||| |||||    
T  9025537 aaattattagcagtgtc 9025553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 776 - 826
Target Start/End: Complemental strand, 9522948 - 9522898
Alignment:
Q  776 acaccgacacttgtaattacactgaattatgtgatttttacaaattattag 826  Q
    |||||||||||||||||||||||||||||||||||||||  ||||||||||    
T  9522948 acaccgacacttgtaattacactgaattatgtgatttttttaaattattag 9522898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 768 - 825
Target Start/End: Original strand, 403858 - 403915
Alignment:
Q  768 cgtgcccgacaccgacacttgtaattacactgaattatgtgatttttacaaattatta 825  Q
    |||| |||||||||||||||||| ||||||| ||||||||||||||| ||||||||||    
T  403858 cgtgtccgacaccgacacttgtagttacactaaattatgtgattttttcaaattatta 403915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 711 - 815
Target Start/End: Complemental strand, 29021035 - 29020930
Alignment:
Q  711 aacctatgaagcacggtcacttc-tcggattaggtgtgtcccggtgacgtacacgtgtcgtgcccgacaccgacacttgtaattacactgaattatgtga 809  Q
    ||||||||||||| || |||||  |||||||||| ||| | ||||| || |||||||||||| |||||||  |||| | |||||||||||||||||| ||    
T  29021035 aacctatgaagcatggacacttaatcggattaggcgtgcctcggtgtcgaacacgtgtcgtgtccgacacaaacacctataattacactgaattatgcga 29020936  T
Q  810 ttttta 815  Q
    ||||||    
T  29020935 ttttta 29020930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 775 - 839
Target Start/End: Original strand, 15489733 - 15489797
Alignment:
Q  775 gacaccgacacttgtaattacactgaattatgtgatttttacaaattattagctgtgtcggcgtg 839  Q
    |||||||||||||||||||||| |||||| ||| |||||| ||||||||||| ||||||| ||||    
T  15489733 gacaccgacacttgtaattacattgaattgtgtaattttttcaaattattagttgtgtcgacgtg 15489797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 712 - 838
Target Start/End: Original strand, 17327588 - 17327719
Alignment:
Q  712 acctatgaagcacggtcacttctcggattaggtgtgtcccggtgacgtacacgtgtcgtg-----cccgacaccgacacttgtaattacactgaattatg 806  Q
    ||||||||||||||| |||| ||||||||||| ||||||| ||| |  ||||||||||||     | |||||| ||||| | || ||||||| |||||||    
T  17327588 acctatgaagcacggacactcctcggattaggcgtgtccctgtgtcagacacgtgtcgtgtccgacacgacactgacacatatagttacactaaattatg 17327687  T
Q  807 tgatttttacaaattattagctgtgtcggcgt 838  Q
    |||||||  |||| | |||| |||||||||||    
T  17327688 tgattttctcaaaatcttagttgtgtcggcgt 17327719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 760 - 839
Target Start/End: Complemental strand, 23771651 - 23771573
Alignment:
Q  760 acacgtgtcgtgcccgacaccgacacttgtaattacactgaattatgtgatttttacaaattattagctgtgtcggcgtg 839  Q
    |||| ||||||| |||||||||||| |||||||||||||||| ||| | ||||||  ||||||||| |||||||||||||    
T  23771651 acacatgtcgtgtccgacaccgacatttgtaattacactgaagtatataattttt-taaattattaactgtgtcggcgtg 23771573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 714 - 833
Target Start/End: Original strand, 32511606 - 32511725
Alignment:
Q  714 ctatgaagcacggtcacttctcggattaggtgtgtcccggtgacgtacacgtgtcgtgcccgacaccgacacttgtaattacactgaattatgtgatttt 813  Q
    ||||||||||||| |||| ||| ||||||| |||  ||| || |  |||  ||||||  |||||||| |||||| |||||||||||||||||||||||||    
T  32511606 ctatgaagcacggacactcctccgattaggcgtgctccgatgtcagacatatgtcgtatccgacaccaacacttataattacactgaattatgtgatttt 32511705  T
Q  814 tacaaattattagctgtgtc 833  Q
       ||||||||||| |||||    
T  32511706 cttaaattattagcggtgtc 32511725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 774 - 836
Target Start/End: Complemental strand, 7930364 - 7930302
Alignment:
Q  774 cgacaccgacacttgtaattacactgaattatgtgatttttacaaattattagctgtgtcggc 836  Q
    ||||||||||||||| |||| |||| ||||||||||||||| ||||||||||  |||||||||    
T  7930364 cgacaccgacacttgaaatttcactaaattatgtgattttttcaaattattaattgtgtcggc 7930302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 774 - 839
Target Start/End: Complemental strand, 8714039 - 8713973
Alignment:
Q  774 cgacaccgacacttgtaattacactgaattatgtgat-ttttacaaattattagctgtgtcggcgtg 839  Q
    ||||||| ||| ||||||||||||||||||||||||| |||| |||||||||| |||||||| ||||    
T  8714039 cgacacccacatttgtaattacactgaattatgtgatttttttcaaattattaactgtgtcgacgtg 8713973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 773 - 839
Target Start/End: Complemental strand, 9629443 - 9629377
Alignment:
Q  773 ccgacaccgacacttgtaattacactgaattatgtgatttttacaaattattagctgtgtcggcgtg 839  Q
    ||||||||||||| | |||||||| ||||||||||||||||  ||||||||| || |||||||||||    
T  9629443 ccgacaccgacacatataattacattgaattatgtgattttctcaaattattggcggtgtcggcgtg 9629377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 781 - 839
Target Start/End: Original strand, 17341671 - 17341729
Alignment:
Q  781 gacacttgtaattacactgaattatgtgatttttacaaattattagctgtgtcggcgtg 839  Q
    ||||||| |||||||||||||||||||||||||  |||||||||| | |||||||||||    
T  17341671 gacacttataattacactgaattatgtgattttatcaaattattaacggtgtcggcgtg 17341729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 784 - 834
Target Start/End: Original strand, 25010212 - 25010262
Alignment:
Q  784 acttgtaattacactgaattatgtgatttttacaaattattagctgtgtcg 834  Q
    ||||||||| || |||||||||||||||||| |||||||||||||||||||    
T  25010212 acttgtaataacgctgaattatgtgattttttcaaattattagctgtgtcg 25010262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 774 - 839
Target Start/End: Complemental strand, 9027237 - 9027172
Alignment:
Q  774 cgacaccgacacttgtaattacactgaattatgtgatttttacaaattattagctgtgtcggcgtg 839  Q
    |||||||||||| | ||||||||| ||||||||||||| |  |||||||||||| |||||||||||    
T  9027237 cgacaccgacacatataattacacggaattatgtgattatctcaaattattagcggtgtcggcgtg 9027172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 712 - 785
Target Start/End: Original strand, 10339052 - 10339125
Alignment:
Q  712 acctatgaagcacggtcacttctcggattaggtgtgtcccggtgacgtacacgtgtcgtgcccgacaccgacac 785  Q
    ||||||||||||||| |||| ||| ||||||| ||||||| ||| || ||| |||||||| |||||||||||||    
T  10339052 acctatgaagcacggacactcctccgattaggcgtgtcccagtgtcggacatgtgtcgtgtccgacaccgacac 10339125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 774 - 839
Target Start/End: Original strand, 21395308 - 21395372
Alignment:
Q  774 cgacaccgacacttgtaattacactgaattatgtgatttttacaaattattagctgtgtcggcgtg 839  Q
    ||||||||||||||||||||||||| |||||||| |||||  |||||||||||| |||| ||||||    
T  21395308 cgacaccgacacttgtaattacactaaattatgt-attttctcaaattattagcggtgttggcgtg 21395372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 773 - 838
Target Start/End: Original strand, 21924934 - 21924999
Alignment:
Q  773 ccgacaccgacacttgtaattacactgaattatgtgatttttacaaattattagctgtgtcggcgt 838  Q
    ||||||||||||| | ||||||||||||||||| |||| ||  |||||||||||| ||||||||||    
T  21924934 ccgacaccgacacatataattacactgaattatttgatattctcaaattattagcagtgtcggcgt 21924999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 774 - 839
Target Start/End: Complemental strand, 26562748 - 26562683
Alignment:
Q  774 cgacaccgacacttgtaattacactgaattatgtgatttttacaaattattagctgtgtcggcgtg 839  Q
    ||||| |||||| | |||||||||||||||||||||||||  |||||| ||||| |||||||||||    
T  26562748 cgacatcgacacatataattacactgaattatgtgattttctcaaatttttagcagtgtcggcgtg 26562683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 728 - 796
Target Start/End: Complemental strand, 1316037 - 1315969
Alignment:
Q  728 cacttctcggattaggtgtgtcccggtgacgtacacgtgtcgtgcccgacaccgacacttgtaattaca 796  Q
    |||||||||| ||||| |||| | |||| || |||| || |||||||||||||||||||||||||||||    
T  1316037 cacttctcgggttaggcgtgttctggtgtcggacacatgacgtgcccgacaccgacacttgtaattaca 1315969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 791 - 839
Target Start/End: Complemental strand, 10842574 - 10842526
Alignment:
Q  791 attacactgaattatgtgatttttacaaattattagctgtgtcggcgtg 839  Q
    |||||||| ||||||||||||||| |||||||||||| |||||||||||    
T  10842574 attacactaaattatgtgattttttcaaattattagcggtgtcggcgtg 10842526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 782 - 834
Target Start/End: Complemental strand, 17435250 - 17435198
Alignment:
Q  782 acacttgtaattacactgaattatgtgatttttacaaattattagctgtgtcg 834  Q
    |||||||||||||||||||||||||| ||||||  |||||||||||| |||||    
T  17435250 acacttgtaattacactgaattatgtaattttttaaaattattagctatgtcg 17435198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #56
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 768 - 839
Target Start/End: Original strand, 5732504 - 5732575
Alignment:
Q  768 cgtgcccgacaccgacacttgtaattacactgaattatgtgatttttacaaattattagctgtgtcggcgtg 839  Q
    |||| ||||||||||||| | |||||||||| || |||||||||||  |||||||||| | |||||||||||    
T  5732504 cgtgtccgacaccgacacatataattacactaaaatatgtgattttctcaaattattaacggtgtcggcgtg 5732575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #57
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 781 - 839
Target Start/End: Complemental strand, 17302609 - 17302550
Alignment:
Q  781 gacacttgtaattacactgaattatgtgat-ttttacaaattattagctgtgtcggcgtg 839  Q
    |||||||||||||||| ||||||||||||| |||| ||||||||||| |||||| |||||    
T  17302609 gacacttgtaattacattgaattatgtgatttttttcaaattattagttgtgtcagcgtg 17302550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #58
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 767 - 814
Target Start/End: Original strand, 26402673 - 26402720
Alignment:
Q  767 tcgtgcccgacaccgacacttgtaattacactgaattatgtgattttt 814  Q
    ||||| ||||||||||||||||| ||||||||||||||||| ||||||    
T  26402673 tcgtgtccgacaccgacacttgtgattacactgaattatgtcattttt 26402720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #59
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 775 - 839
Target Start/End: Original strand, 27904037 - 27904103
Alignment:
Q  775 gacaccgacacttgtaattacactgaattatgtg--atttttacaaattattagctgtgtcggcgtg 839  Q
    |||||||||| |||||||||||||||||||||||   |||||  |||||||||||| ||||||||||    
T  27904037 gacaccgacatttgtaattacactgaattatgtgttttttttttaaattattagctatgtcggcgtg 27904103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #60
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 760 - 838
Target Start/End: Complemental strand, 30851673 - 30851597
Alignment:
Q  760 acacgtgtcgtgcccgacaccgacacttgtaattacactgaattatgtgatttttacaaattattagctgtgtcggcgt 838  Q
    |||||||||||| ||||||||||||| | |||||||| |||||  |||||||||   ||||||||||| ||||||||||    
T  30851673 acacgtgtcgtgtccgacaccgacacatataattacattgaat--tgtgattttcttaaattattagcagtgtcggcgt 30851597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #61
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 773 - 823
Target Start/End: Complemental strand, 1700412 - 1700362
Alignment:
Q  773 ccgacaccgacacttgtaattacactgaattatgtgatttttacaaattat 823  Q
    ||||||||||||||| ||||||||||||| ||||||||||||  |||||||    
T  1700412 ccgacaccgacacttataattacactgaaatatgtgatttttttaaattat 1700362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #62
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 774 - 836
Target Start/End: Original strand, 7996378 - 7996440
Alignment:
Q  774 cgacaccgacacttgtaattacactgaattatgtgatttttacaaattattagctgtgtcggc 836  Q
    |||||||||| | | ||||||||||||||||| |||||||  |||||||||||| ||||||||    
T  7996378 cgacaccgacgcatataattacactgaattatatgattttctcaaattattagcagtgtcggc 7996440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #63
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 774 - 836
Target Start/End: Complemental strand, 8022423 - 8022361
Alignment:
Q  774 cgacaccgacacttgtaattacactgaattatgtgatttttacaaattattagctgtgtcggc 836  Q
    |||||||||| | | ||||||||||||||||| |||||||  |||||||||||| ||||||||    
T  8022423 cgacaccgacgcatataattacactgaattatatgattttctcaaattattagcagtgtcggc 8022361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #64
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 763 - 805
Target Start/End: Original strand, 16388206 - 16388248
Alignment:
Q  763 cgtgtcgtgcccgacaccgacacttgtaattacactgaattat 805  Q
    |||| |||| |||||||||||||||||||||||||||||||||    
T  16388206 cgtgccgtgtccgacaccgacacttgtaattacactgaattat 16388248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #65
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 764 - 825
Target Start/End: Original strand, 31579217 - 31579276
Alignment:
Q  764 gtgtcgtgcccgacaccgacacttgtaattacactgaattatgtgatttttacaaattatta 825  Q
    |||||||| ||||||||||||| |  ||||||||||||||||||||||||  ||||||||||    
T  31579217 gtgtcgtgtccgacaccgacacat--aattacactgaattatgtgattttctcaaattatta 31579276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #66
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 774 - 838
Target Start/End: Complemental strand, 7027301 - 7027236
Alignment:
Q  774 cgacaccgacacttgtaattacactgaattatgtgat-ttttacaaattattagctgtgtcggcgt 838  Q
    |||||||||||| | |||||||||||||||||||||| |||| |||||||| ||  ||||||||||    
T  7027301 cgacaccgacacatataattacactgaattatgtgatttttttcaaattatcaggggtgtcggcgt 7027236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #67
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 774 - 839
Target Start/End: Original strand, 8931602 - 8931667
Alignment:
Q  774 cgacaccgacacttgtaattacactgaattatgtgatttttacaaattattagctgtgtcggcgtg 839  Q
    ||||| |||||| | |||||| |||||||||||| |||||  |||||| |||||||||||||||||    
T  8931602 cgacatcgacacatataattatactgaattatgttattttctcaaatttttagctgtgtcggcgtg 8931667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #68
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 714 - 839
Target Start/End: Original strand, 13360313 - 13360437
Alignment:
Q  714 ctatgaagcacggtcacttctcggattaggtgtgtcccggtgacgtacacgtgtcgtgcccgacaccgacacttgtaattacactgaattatgtgatttt 813  Q
    ||||||||||||| ||||  |||||||||| ||||| | ||| || |||  ||| ||| | |||||||| || | |||||||||||||||||||||||||    
T  13360313 ctatgaagcacggacactcttcggattaggcgtgtctcagtgtcggacat-tgttgtgtctgacaccgaaacatataattacactgaattatgtgatttt 13360411  T
Q  814 tacaaattattagctgtgtcggcgtg 839  Q
      ||||||| |||  |||||| ||||    
T  13360412 ctcaaattactagtggtgtcgacgtg 13360437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #69
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 774 - 839
Target Start/End: Original strand, 20371110 - 20371175
Alignment:
Q  774 cgacaccgacacttgtaattacactgaattatgtgatttttacaaattattagctgtgtcggcgtg 839  Q
    |||||||||||| | |||| ||| ||| ||||||||||||  |||||||||||| |||||||||||    
T  20371110 cgacaccgacacatataatcacattgagttatgtgattttctcaaattattagcggtgtcggcgtg 20371175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #70
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 786 - 834
Target Start/End: Complemental strand, 2224273 - 2224225
Alignment:
Q  786 ttgtaattacactgaattatgtgatttttacaaattattagctgtgtcg 834  Q
    |||||||||||||||||||| ||||||||  ||||||||||||| ||||    
T  2224273 ttgtaattacactgaattatatgatttttttaaattattagctgcgtcg 2224225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #71
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 773 - 825
Target Start/End: Original strand, 6327517 - 6327569
Alignment:
Q  773 ccgacaccgacacttgtaattacactgaattatgtgatttttacaaattatta 825  Q
    |||||| ||||||||||||||||||| |||||| | |||||| ||||||||||    
T  6327517 ccgacatcgacacttgtaattacacttaattatataattttttcaaattatta 6327569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #72
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 774 - 826
Target Start/End: Complemental strand, 7151471 - 7151419
Alignment:
Q  774 cgacaccgacacttgtaattacactgaattatgtgatttttacaaattattag 826  Q
    ||||||| |||| | |||||||||| ||||||||||||||| |||||||||||    
T  7151471 cgacaccaacacatataattacacttaattatgtgattttttcaaattattag 7151419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #73
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 712 - 836
Target Start/End: Original strand, 13364643 - 13364767
Alignment:
Q  712 acctatgaagcacggtcacttctcggattaggtgtgtcccggtgacgtacacgtgtcgtgcccgacaccgacacttgtaattacactgaattatgtgatt 811  Q
    ||||||||||||| | ||||  ||||| |||  |||||| |||| |  ||| || ||||| || |||||||||| | | ||||||||||||||| |||||    
T  13364643 acctatgaagcacagacactcgtcggaatagacgtgtcctggtgtcagacatgtatcgtgtccaacaccgacacatatgattacactgaattatatgatt 13364742  T
Q  812 tttacaaattattagctgtgtcggc 836  Q
    ||  |||||||| ||| ||||||||    
T  13364743 ttctcaaattataagcagtgtcggc 13364767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #74
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 775 - 839
Target Start/End: Complemental strand, 19044522 - 19044458
Alignment:
Q  775 gacaccgacacttgtaattacactgaattatgtgatttttacaaattattagctgtgtcggcgtg 839  Q
    ||||||||||| | |||| ||||||||||||||||| ||  |||||||||||  |||||||||||    
T  19044522 gacaccgacacatataataacactgaattatgtgatattctcaaattattagtcgtgtcggcgtg 19044458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #75
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 789 - 833
Target Start/End: Original strand, 34225824 - 34225868
Alignment:
Q  789 taattacactgaattatgtgatttttacaaattattagctgtgtc 833  Q
    |||||||||||||||||| ||||||| ||||||||||| ||||||    
T  34225824 taattacactgaattatgcgattttttcaaattattagttgtgtc 34225868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #76
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 780 - 835
Target Start/End: Complemental strand, 2117129 - 2117074
Alignment:
Q  780 cgacacttgtaattacactgaattatgtgatttttacaaattattagctgtgtcgg 835  Q
    |||||||| ||||| || ||||||||||||||||| |||||||||||  |||||||    
T  2117129 cgacacttataattgcattgaattatgtgattttttcaaattattagaggtgtcgg 2117074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #77
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 782 - 825
Target Start/End: Original strand, 4118341 - 4118384
Alignment:
Q  782 acacttgtaattacactgaattatgtgatttttacaaattatta 825  Q
    ||||||||||||||| | ||||||||||||||| ||||||||||    
T  4118341 acacttgtaattacatttaattatgtgattttttcaaattatta 4118384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #78
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 776 - 827
Target Start/End: Complemental strand, 7086852 - 7086801
Alignment:
Q  776 acaccgacacttgtaattacactgaattatgtgatttttacaaattattagc 827  Q
    |||||||||| | |||||||||| ||||||||||||||  ||||||||||||    
T  7086852 acaccgacacatataattacactaaattatgtgattttctcaaattattagc 7086801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #79
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 774 - 825
Target Start/End: Complemental strand, 9617493 - 9617442
Alignment:
Q  774 cgacaccgacacttgtaattacactgaattatgtgatttttacaaattatta 825  Q
    |||||||||||| | |||||||| ||||||||||||||||  ||||||||||    
T  9617493 cgacaccgacacatataattacattgaattatgtgattttctcaaattatta 9617442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #80
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 789 - 824
Target Start/End: Original strand, 16388248 - 16388283
Alignment:
Q  789 taattacactgaattatgtgatttttacaaattatt 824  Q
    |||||||||||||||||||||||||| |||||||||    
T  16388248 taattacactgaattatgtgattttttcaaattatt 16388283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #81
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 775 - 814
Target Start/End: Original strand, 31429004 - 31429043
Alignment:
Q  775 gacaccgacacttgtaattacactgaattatgtgattttt 814  Q
    |||||| ||| |||||||||||||||||||||||||||||    
T  31429004 gacacctacatttgtaattacactgaattatgtgattttt 31429043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #82
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 789 - 836
Target Start/End: Original strand, 34290092 - 34290139
Alignment:
Q  789 taattacactgaattatgtgatttttacaaattattagctgtgtcggc 836  Q
    ||||||||||||||||||||||| |  ||||||||||| |||||||||    
T  34290092 taattacactgaattatgtgattctcgcaaattattagttgtgtcggc 34290139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #83
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 714 - 752
Target Start/End: Complemental strand, 6389851 - 6389813
Alignment:
Q  714 ctatgaagcacggtcacttctcggattaggtgtgtcccg 752  Q
    ||||||||||||| |||||||||||||||| ||||||||    
T  6389851 ctatgaagcacggacacttctcggattaggagtgtcccg 6389813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #84
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 717 - 755
Target Start/End: Original strand, 8389411 - 8389449
Alignment:
Q  717 tgaagcacggtcacttctcggattaggtgtgtcccggtg 755  Q
    |||||||||| |||| |||||||||||||||||||||||    
T  8389411 tgaagcacggacactcctcggattaggtgtgtcccggtg 8389449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #85
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 774 - 839
Target Start/End: Complemental strand, 6214619 - 6214554
Alignment:
Q  774 cgacaccgacacttgtaattacactgaattatgtgatttttacaaattattagctgtgtcggcgtg 839  Q
    |||||||||||| | |||||||||| ||||||||| |||||  |||||| |||| || ||||||||    
T  6214619 cgacaccgacacatctaattacacttaattatgtgtttttttaaaattactagcggtatcggcgtg 6214554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #86
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 774 - 839
Target Start/End: Original strand, 16488590 - 16488655
Alignment:
Q  774 cgacaccgacacttgtaattacactgaattatgtgatttttacaaattattagctgtgtcggcgtg 839  Q
    |||||||||||| | ||||||||||| ||| |||||||||   |||  ||||||||||||||||||    
T  16488590 cgacaccgacacatataattacactgcattttgtgattttctaaaaaaattagctgtgtcggcgtg 16488655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #87
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 774 - 839
Target Start/End: Complemental strand, 18367895 - 18367830
Alignment:
Q  774 cgacaccgacacttgtaattacactgaattatgtgatttttacaaattattagctgtgtcggcgtg 839  Q
    |||||||||||| | ||||||||||| ||| |||||||||   |||  ||||||||||||||||||    
T  18367895 cgacaccgacacatataattacactgcattttgtgattttctaaaaaaattagctgtgtcggcgtg 18367830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #88
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 779 - 832
Target Start/End: Original strand, 30866149 - 30866202
Alignment:
Q  779 ccgacacttgtaattacactgaattatgtgatttttacaaattattagctgtgt 832  Q
    ||||||| | |||||||| ||||||||||||||||  |||||||||||| ||||    
T  30866149 ccgacacatataattacattgaattatgtgattttctcaaattattagcggtgt 30866202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #89
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 774 - 827
Target Start/End: Original strand, 34073347 - 34073400
Alignment:
Q  774 cgacaccgacacttgtaattacactgaattatgtgatttttacaaattattagc 827  Q
    |||||||||| | | |||||||||||||||||| ||||||  ||||||||||||    
T  34073347 cgacaccgacccatataattacactgaattatgagattttctcaaattattagc 34073400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 94; Significance: 2e-45; HSPs: 75)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 714 - 839
Target Start/End: Original strand, 23292926 - 23293051
Alignment:
Q  714 ctatgaagcacggtcacttctcggattaggtgtgtcccggtgacgtacacgtgtcgtgcccgacaccgacacttgtaattacactgaattatgtgatttt 813  Q
    ||||||||||||| |||| ||||||||||| ||||||||||| || |||||||||||| |||||||||||||||||||||| ||||||||||||||||||    
T  23292926 ctatgaagcacggacactcctcggattaggcgtgtcccggtgtcggacacgtgtcgtgtccgacaccgacacttgtaattatactgaattatgtgatttt 23293025  T
Q  814 tacaaattattagctgtgtcggcgtg 839  Q
    | ||||||||||||||||||||||||    
T  23293026 ttcaaattattagctgtgtcggcgtg 23293051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 715 - 836
Target Start/End: Original strand, 3947702 - 3947828
Alignment:
Q  715 tatgaagcacggtcacttctcggattaggtgtgtcccggtgacgtacacgtgtcgtgcccgacacc-----gacacttgtaattacactgaattatgtga 809  Q
    |||||||||||| |||| |||||||||||||||||| |||| || |||||||||||| |||||||      |||||||||||||||||||||||||| ||    
T  3947702 tatgaagcacggacactcctcggattaggtgtgtcctggtgtcggacacgtgtcgtgtccgacacgacactgacacttgtaattacactgaattatgcga 3947801  T
Q  810 tttttacaaattattagctgtgtcggc 836  Q
    ||||| |||||||||||||||||||||    
T  3947802 ttttttcaaattattagctgtgtcggc 3947828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 714 - 839
Target Start/End: Complemental strand, 49431145 - 49431019
Alignment:
Q  714 ctatgaagcacggtcacttctcggattaggtgtgtcccggtgacgtacacgtgtcgtgcccgacaccgacacttgtaattacactgaattatgtgat-tt 812  Q
    |||| ||||| || |||| ||||||| ||| |||||||||||  | |||||||||||| ||||||||||||||| |||||||||||||||||||||| ||    
T  49431145 ctataaagcatggacactcctcggataaggcgtgtcccggtgttggacacgtgtcgtgtccgacaccgacacttttaattacactgaattatgtgatttt 49431046  T
Q  813 ttacaaattattagctgtgtcggcgtg 839  Q
    || ||||||||||||||||||||||||    
T  49431045 tttcaaattattagctgtgtcggcgtg 49431019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 714 - 833
Target Start/End: Original strand, 28964188 - 28964307
Alignment:
Q  714 ctatgaagcacggtcacttctcggattaggtgtgtcccggtgacgtacacgtgtcgtgcccgacaccgacacttgtaattacactgaattatgtgatttt 813  Q
    |||||||||| || |||| ||||||||||| ||||||| ||| || | | |||||||| ||||||| |||||||||||||||||||||||||||||||||    
T  28964188 ctatgaagcatggacactcctcggattaggcgtgtcccagtgtcggatatgtgtcgtgtccgacacagacacttgtaattacactgaattatgtgatttt 28964287  T
Q  814 tacaaattattagctgtgtc 833  Q
    | ||||||||||||| ||||    
T  28964288 ttcaaattattagctatgtc 28964307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 714 - 835
Target Start/End: Original strand, 2361915 - 2362036
Alignment:
Q  714 ctatgaagcacggtcacttctcggattaggtgtgtcccggtgacgtacacgtgtcgtgcccgacaccgacacttgtaattacactgaattatgtgatttt 813  Q
    ||||||||||||| ||||  || ||||||||||||| ||||| |  ||||| |||||| ||||||||||||||| |||||||||| |||||||| |||||    
T  2361915 ctatgaagcacggacactcgtcagattaggtgtgtctcggtgtcagacacgagtcgtgtccgacaccgacacttttaattacactaaattatgtaatttt 2362014  T
Q  814 tacaaattattagctgtgtcgg 835  Q
    | ||||||||||||||||||||    
T  2362015 ttcaaattattagctgtgtcgg 2362036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 714 - 835
Target Start/End: Original strand, 8423658 - 8423779
Alignment:
Q  714 ctatgaagcacggtcacttctcggattaggtgtgtcccggtgacgtacacgtgtcgtgcccgacaccgacacttgtaattacactgaattatgtgatttt 813  Q
    |||||| |||||| |||||||| ||||||| ||||||||||| || |||  ||||||| |||||||||||| || |||||||||||||||||||||||||    
T  8423658 ctatgacgcacggacacttctccgattaggcgtgtcccggtgtcggacagctgtcgtgtccgacaccgacatttataattacactgaattatgtgatttt 8423757  T
Q  814 tacaaattattagctgtgtcgg 835  Q
      |||||||||||| |||||||    
T  8423758 ctcaaattattagcggtgtcgg 8423779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 714 - 839
Target Start/End: Original strand, 35157925 - 35158050
Alignment:
Q  714 ctatgaagcacggtcacttctcggattaggtgtgtcccggtgacgtacacgtgtcgtgcccgacaccgacacttgtaattacactgaattatgtgatttt 813  Q
    ||||||||||||| |||||||||||||| | |||| ||||||  | ||| |||||||| | ||||||||||||| |||||||||| ||||||||||||||    
T  35157925 ctatgaagcacggacacttctcggattaagcgtgttccggtgttggacatgtgtcgtgtcagacaccgacacttataattacactaaattatgtgatttt 35158024  T
Q  814 tacaaattattagctgtgtcggcgtg 839  Q
    | ||||||||||| || |||||||||    
T  35158025 tccaaattattagttgcgtcggcgtg 35158050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 728 - 836
Target Start/End: Complemental strand, 21945608 - 21945500
Alignment:
Q  728 cacttctcggattaggtgtgtcccggtgacgtacacgtgtcgtgcccgacaccgacacttgtaattacactgaattatgtgatttttacaaattattagc 827  Q
    |||| ||||||||||| ||||  ||||| || ||| ||||| || ||||||||||||||||||||||||||||||||||| |||||| ||||||||||||    
T  21945608 cactcctcggattaggcgtgttgcggtgtcggacatgtgtcatgtccgacaccgacacttgtaattacactgaattatgtcattttttcaaattattagc 21945509  T
Q  828 tgtgtcggc 836  Q
    |||||||||    
T  21945508 tgtgtcggc 21945500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 711 - 813
Target Start/End: Complemental strand, 35161158 - 35161056
Alignment:
Q  711 aacctatgaagcacggtcacttctcggattaggtgtgtcccggtgacgtacacgtgtcgtgcccgacaccgacacttgtaattacactgaattatgtgat 810  Q
    |||||||||||||||| ||||| ||||||||||||||| |||||| || |||||||||||| ||||| | || |||| ||||||||||||||||||||||    
T  35161158 aacctatgaagcacggacacttttcggattaggtgtgttccggtgtcggacacgtgtcgtgtccgactctgatacttataattacactgaattatgtgat 35161059  T
Q  811 ttt 813  Q
    |||    
T  35161058 ttt 35161056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 714 - 839
Target Start/End: Original strand, 12895214 - 12895339
Alignment:
Q  714 ctatgaagcacggtcacttctcggattaggtgtgtcccggtgacgtacacgtgtcgtgcccgacaccgacacttgtaattacactgaattatgtgatttt 813  Q
    ||||||||||||  |||| ||||||||||| |||||||| || || | || ||||||| ||||||||||||||| |||||||||  ||||||||||||||    
T  12895214 ctatgaagcacgaacactcctcggattaggcgtgtcccgatgtcggatacatgtcgtgtccgacaccgacacttataattacacaaaattatgtgatttt 12895313  T
Q  814 tacaaattattagctgtgtcggcgtg 839  Q
    | ||||||||||  ||||||||||||    
T  12895314 ttcaaattattatttgtgtcggcgtg 12895339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 714 - 838
Target Start/End: Original strand, 34306744 - 34306867
Alignment:
Q  714 ctatgaagcacggtcacttctcggattaggtgtgtcccggtgacgtacacgtgtcgtgcccgacaccgacacttgtaattacactgaattatgtgatttt 813  Q
    ||||||||||||  || | ||| ||||||| ||||| ||||| || |||||||||||| ||||||||||||||||||||||||||  ||||| |||||||    
T  34306744 ctatgaagcacgaacattcctcagattaggcgtgtctcggtgtcggacacgtgtcgtgtccgacaccgacacttgtaattacactacattatctgatttt 34306843  T
Q  814 tacaaattattagctgtgtcggcgt 838  Q
    | ||||||||||| |||||||||||    
T  34306844 t-caaattattagttgtgtcggcgt 34306867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 745 - 832
Target Start/End: Complemental strand, 29205532 - 29205445
Alignment:
Q  745 gtgtcccggtgacgtacacgtgtcgtgcccgacaccgacacttgtaattacactgaattatgtgatttttacaaattattagctgtgt 832  Q
    ||||||||||| || ||| |||||||| || ||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||    
T  29205532 gtgtcccggtgtcggacatgtgtcgtgtccaacaccgacacttgtaattacactgaattatgtgattttttcaaattattagccgtgt 29205445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 709 - 835
Target Start/End: Original strand, 715540 - 715669
Alignment:
Q  709 ataacctatgaagcacggtcacttctcggattaggtgtgtcccggtgacgtacacgtgtcgtgccc--gacaccgacacttgtaattacactgaattatg 806  Q
    |||| ||||||||||||| |||| ||||||||||| ||||||| ||| || ||| ||||||||  |  |||||| |||||||||||||||||||||||||    
T  715540 ataatctatgaagcacggacactcctcggattaggcgtgtccctgtgtcggacatgtgtcgtgtacaagacaccaacacttgtaattacactgaattatg 715639  T
Q  807 tga-tttttacaaattattagctgtgtcgg 835  Q
    ||| |||||  |||||||||||||||||||    
T  715640 tgattttttttaaattattagctgtgtcgg 715669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 709 - 835
Target Start/End: Original strand, 752866 - 752995
Alignment:
Q  709 ataacctatgaagcacggtcacttctcggattaggtgtgtcccggtgacgtacacgtgtcgtgccc--gacaccgacacttgtaattacactgaattatg 806  Q
    |||| ||||||||||||| |||| ||||||||||| ||||||| ||| || ||| ||||||||  |  |||||| |||||||||||||||||||||||||    
T  752866 ataatctatgaagcacggacactcctcggattaggcgtgtccctgtgtcggacatgtgtcgtgtacaagacaccaacacttgtaattacactgaattatg 752965  T
Q  807 tga-tttttacaaattattagctgtgtcgg 835  Q
    ||| |||||  |||||||||||||||||||    
T  752966 tgattttttttaaattattagctgtgtcgg 752995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 714 - 839
Target Start/End: Complemental strand, 42640643 - 42640520
Alignment:
Q  714 ctatgaagcacggtcacttctcggattaggtgtgtcccggtgacgtacacgtgtcgtgcccgacaccgacacttgtaattacactgaattatgtgat--- 810  Q
    |||||||||||||  ||| ||||||||||| |||||| |||| || |||||||||     |||||||||||||||||||||||||||||||||||||       
T  42640643 ctatgaagcacggaaactcctcggattaggcgtgtcctggtgccggacacgtgtc-----cgacaccgacacttgtaattacactgaattatgtgatttt 42640549  T
Q  811 ttttacaaattattagctgtgtcggcgtg 839  Q
    |||| |||||||| |||||||||||||||    
T  42640548 tttttcaaattatcagctgtgtcggcgtg 42640520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 760 - 838
Target Start/End: Original strand, 54580009 - 54580087
Alignment:
Q  760 acacgtgtcgtgcccgacaccgacacttgtaattacactgaattatgtgatttttacaaattattagctgtgtcggcgt 838  Q
    |||||||||||| ||||||||||||||| |||||||||||||||||||||||||| ||||||||||| |||||| ||||    
T  54580009 acacgtgtcgtgtccgacaccgacacttataattacactgaattatgtgattttttcaaattattagttgtgtcagcgt 54580087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 716 - 833
Target Start/End: Complemental strand, 4157266 - 4157150
Alignment:
Q  716 atgaagcacggtcacttctcggattaggtgtgtcccggtgacgtacacgtgtcgtgcccgacaccgacacttgtaattacactgaattatgtgattttta 815  Q
    ||||||||| | |||| |||| ||||||||| || ||||| || ||| |||||||| ||||||||||||||||||||| |||| |||||||||||||||     
T  4157266 atgaagcacagacactcctcgaattaggtgtttctcggtgtcggacatgtgtcgtgtccgacaccgacacttgtaattgcactaaattatgtgattttt- 4157168  T
Q  816 caaattattagctgtgtc 833  Q
    ||||||||||| ||||||    
T  4157167 caaattattagttgtgtc 4157150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 712 - 839
Target Start/End: Complemental strand, 16073515 - 16073389
Alignment:
Q  712 acctatgaagcacggtcacttctcggattaggtgtgtcccggtgacgtacacgtgtcgtgcccgacaccgacacttgtaattacactgaattatgtgatt 811  Q
    |||||||||||| || |||| ||||||||||| |||||   ||| || ||| || ||||| |||||||||||||||||||||||||||||||||| ||||    
T  16073515 acctatgaagcatggacactcctcggattaggcgtgtcttagtgtcggacatgtatcgtgtccgacaccgacacttgtaattacactgaattatgcgatt 16073416  T
Q  812 tttacaaattattagctgtgtcggcgtg 839  Q
    ||| ||||||||||  ||||| ||||||    
T  16073415 ttt-caaattattacttgtgttggcgtg 16073389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 737 - 835
Target Start/End: Original strand, 38846975 - 38847073
Alignment:
Q  737 gattaggtgtgtcccggtgacgtacacgtgtcgtgcccgacaccgacacttgtaattacactgaattatgtgatttttacaaattattagctgtgtcgg 835  Q
    |||||||| ||| | |||| || |||||||||||  ||||||| |||||||||||||||||||||| || |||||||| ||||||||||||||||||||    
T  38846975 gattaggtatgttctggtgtcggacacgtgtcgtatccgacactgacacttgtaattacactgaataatatgattttttcaaattattagctgtgtcgg 38847073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 712 - 839
Target Start/End: Complemental strand, 19482800 - 19482662
Alignment:
Q  712 acctatgaagcacggtcacttctcggattaggtgtgtcccggtgacgtacacgtgtcgtgccc-----------gacaccgacacttgtaattacactga 800  Q
    ||||||||||||||  |||| ||||||||||||||||||| ||| || |||||||||||| ||           |||||| |||||||||||||||| ||    
T  19482800 acctatgaagcacgaacactcctcggattaggtgtgtcccagtgtcggacacgtgtcgtgtccaataccgacacgacaccaacacttgtaattacaccga 19482701  T
Q  801 attatgtgatttttacaaattattagctgtgtcggcgtg 839  Q
    |||||||||| ||| ||||||||||| ||||||||||||    
T  19482700 attatgtgatattttcaaattattagttgtgtcggcgtg 19482662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 733 - 839
Target Start/End: Original strand, 12797297 - 12797402
Alignment:
Q  733 ctcggattaggtgtgtcccggtgacgtacacgtgtcgtgcccgacaccgacacttgtaattacactgaattatgtgatttttacaaattattagctgtgt 832  Q
    ||||||||||   |||||||||| |  ||| || ||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||| | ||     
T  12797297 ctcggattagacttgtcccggtgtcagacatgtatcgtgtccgacaccgacacttgtaattacactgaattatgtgattttt-caaattattagttttgc 12797395  T
Q  833 cggcgtg 839  Q
    |||||||    
T  12797396 cggcgtg 12797402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 717 - 839
Target Start/End: Complemental strand, 28084640 - 28084515
Alignment:
Q  717 tgaagcacggtcacttctcggattaggtgtgtcccggtgacgtacacgtgtcgtg--cccgacaccgacacttgtaattacactgaattatgtgat-ttt 813  Q
    |||||||||| |||| ||||||||||| ||||||| ||| || |||||||||     | |||||| |||||||||||||||| ||||||||||||| |||    
T  28084640 tgaagcacggacactcctcggattaggcgtgtcccagtgtcggacacgtgtcaccgacacgacacagacacttgtaattacattgaattatgtgattttt 28084541  T
Q  814 tacaaattattagctgtgtcggcgtg 839  Q
    | |||||| |||||||||||||||||    
T  28084540 ttcaaattcttagctgtgtcggcgtg 28084515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 774 - 839
Target Start/End: Complemental strand, 30299006 - 30298940
Alignment:
Q  774 cgacaccgacacttgtaattacactgaattatgtga-tttttacaaattattagctgtgtcggcgtg 839  Q
    |||||||||||||||||||||||||||||||||| | ||||| ||||||||||||||||||||||||    
T  30299006 cgacaccgacacttgtaattacactgaattatgtcatttttttcaaattattagctgtgtcggcgtg 30298940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 774 - 839
Target Start/End: Complemental strand, 30327874 - 30327808
Alignment:
Q  774 cgacaccgacacttgtaattacactgaattatgtga-tttttacaaattattagctgtgtcggcgtg 839  Q
    |||||||||||||||||||||||||||||||||| | ||||| ||||||||||||||||||||||||    
T  30327874 cgacaccgacacttgtaattacactgaattatgtcatttttttcaaattattagctgtgtcggcgtg 30327808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 774 - 839
Target Start/End: Original strand, 12895116 - 12895181
Alignment:
Q  774 cgacaccgacacttgtaattacactgaattatgtgatttttacaaattattagctgtgtcggcgtg 839  Q
    ||||||||||||||||||||||  ||||||||||||||||| ||||||||||||||| ||||||||    
T  12895116 cgacaccgacacttgtaattactttgaattatgtgattttttcaaattattagctgtttcggcgtg 12895181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 774 - 838
Target Start/End: Original strand, 11596352 - 11596416
Alignment:
Q  774 cgacaccgacacttgtaattacactgaattatgtgatttttacaaattattagctgtgtcggcgt 838  Q
    ||||||| ||||||||||||||||||||||||||||||||| ||||||||||||| ||| |||||    
T  11596352 cgacacctacacttgtaattacactgaattatgtgattttttcaaattattagctttgttggcgt 11596416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 733 - 839
Target Start/End: Complemental strand, 40481741 - 40481631
Alignment:
Q  733 ctcggattaggtgtgtcccggtgacgtacacgtgtcgtgcccgacaccgaca-----cttgtaattacactgaattatgtgatttttacaaattattagc 827  Q
    ||||||||| ||||||  ||||| || |||||||||||| || |||||||||     |||||||||||||||||||||||||||||| |||||||||||     
T  40481741 ctcggattaagtgtgtttcggtgtcggacacgtgtcgtgtccaacaccgacataacacttgtaattacactgaattatgtgattttt-caaattattagt 40481643  T
Q  828 tgtgtcggcgtg 839  Q
    ||| ||||||||    
T  40481642 tgtatcggcgtg 40481631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 731 - 825
Target Start/End: Original strand, 40179593 - 40179687
Alignment:
Q  731 ttctcggattaggtgtgtcccggtgacgtacacgtgtcgtgcccgacaccgacacttgtaattacactgaattatgtgatttttacaaattatta 825  Q
    ||||||||||||| |||||  |||| || ||| |||||||| ||||||||||| | | |||||||||||||||||||||||||| |||| |||||    
T  40179593 ttctcggattaggcgtgtcatggtgtcgaacatgtgtcgtgtccgacaccgacgcatataattacactgaattatgtgattttttcaaactatta 40179687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 775 - 839
Target Start/End: Complemental strand, 47264044 - 47263980
Alignment:
Q  775 gacaccgacacttgtaattacactgaattatgtgatttttacaaattattagctgtgtcggcgtg 839  Q
    |||| ||||| |||||||||||| |||||||||||||||||||||||||||||| ||||| ||||    
T  47264044 gacatcgacatttgtaattacacagaattatgtgatttttacaaattattagctatgtcgacgtg 47263980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 728 - 814
Target Start/End: Complemental strand, 4157541 - 4157455
Alignment:
Q  728 cacttctcggattaggtgtgtcccggtgacgtacacgtgtcgtgcccgacaccgacacttgtaattacactgaattatgtgattttt 814  Q
    |||| |||| |||||| || || ||||| || ||| |||||||| ||||||||||||||||||||| |||| |||||||||||||||    
T  4157541 cactcctcgaattaggcgtttctcggtgtcggacatgtgtcgtgtccgacaccgacacttgtaattgcactaaattatgtgattttt 4157455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 776 - 825
Target Start/End: Original strand, 6485613 - 6485662
Alignment:
Q  776 acaccgacacttgtaattacactgaattatgtgatttttacaaattatta 825  Q
    ||||||||||||||||||||||| ||||||||||||||| ||||||||||    
T  6485613 acaccgacacttgtaattacactaaattatgtgattttttcaaattatta 6485662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 712 - 839
Target Start/End: Original strand, 22234817 - 22234956
Alignment:
Q  712 acctatgaagcacggtcacttctcggattaggtgtgtcccggtgacgtacacgtgtcgtgcc-----------cgacaccgacacttgtaattacactga 800  Q
    ||||||||||||||  ||||||||||||||| ||||||| |||| || |||||||||||| |           |||||||||||| |  |||||||||||    
T  22234817 acctatgaagcacgaacacttctcggattagctgtgtcctggtgtcggacacgtgtcgtgtcagacaccgacacgacaccgacacatagaattacactga 22234916  T
Q  801 attatgtga-tttttacaaattattagctgtgtcggcgtg 839  Q
    ||||||||| ||||| |||||| ||||| |||||||||||    
T  22234917 attatgtgatttttttcaaatttttagcggtgtcggcgtg 22234956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 775 - 839
Target Start/End: Original strand, 24613702 - 24613766
Alignment:
Q  775 gacaccgacacttgtaattacactgaattatgtgatttttacaaattattagctgtgtcggcgtg 839  Q
    |||||||||||||||| ||||| ||||||||||||||||  ||||||||||| ||||||| ||||    
T  24613702 gacaccgacacttgtacttacattgaattatgtgattttctcaaattattagttgtgtcgacgtg 24613766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 774 - 839
Target Start/End: Complemental strand, 50280942 - 50280875
Alignment:
Q  774 cgacaccgacacttgtaattacac--tgaattatgtgatttttacaaattattagctgtgtcggcgtg 839  Q
    |||||||| |||||||||||||||  | |||||||||| |||| ||||||||||||||||||||||||    
T  50280942 cgacaccggcacttgtaattacacacttaattatgtgaatttttcaaattattagctgtgtcggcgtg 50280875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 768 - 819
Target Start/End: Original strand, 6879459 - 6879510
Alignment:
Q  768 cgtgcccgacaccgacacttgtaattacactgaattatgtgatttttacaaa 819  Q
    |||| |||||||||||||||||||||||||| ||||||||||||||| ||||    
T  6879459 cgtgtccgacaccgacacttgtaattacacttaattatgtgatttttccaaa 6879510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 782 - 833
Target Start/End: Complemental strand, 51701309 - 51701258
Alignment:
Q  782 acacttgtaattacactgaattatgtgatttttacaaattattagctgtgtc 833  Q
    ||||||||||||||||| |||||||| |||||| ||||||||||||||||||    
T  51701309 acacttgtaattacactcaattatgtaattttttcaaattattagctgtgtc 51701258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 711 - 785
Target Start/End: Original strand, 53381527 - 53381602
Alignment:
Q  711 aacctatgaagcacggtcacttctcggattaggtgtgtcccggtgacgtacacgtgtc-gtgcccgacaccgacac 785  Q
    |||||||||||||||| |||| ||||||||||||||||||||||| || | ||| ||| ||| |||||||||||||    
T  53381527 aacctatgaagcacggacactcctcggattaggtgtgtcccggtgtcggatacgcgtcagtgtccgacaccgacac 53381602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 773 - 839
Target Start/End: Complemental strand, 15029825 - 15029759
Alignment:
Q  773 ccgacaccgacacttgtaattacactgaattatgtgatttttacaaattattagctgtgtcggcgtg 839  Q
    |||||||| |||| | |||||||||||||||||||||| ||| |||||||||||| ||||| |||||    
T  15029825 ccgacaccaacacatataattacactgaattatgtgatattttcaaattattagcagtgtctgcgtg 15029759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 774 - 839
Target Start/End: Complemental strand, 4383426 - 4383362
Alignment:
Q  774 cgacaccgacacttgtaattacactgaattatgtgatttttacaaattattagctgtgtcggcgtg 839  Q
    |||||| |||| ||||||||||||||||||||||||||||| ||||||||||| ||| ||| ||||    
T  4383426 cgacactgacatttgtaattacactgaattatgtgattttt-caaattattagttgtatcgacgtg 4383362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 773 - 838
Target Start/End: Original strand, 4672084 - 4672149
Alignment:
Q  773 ccgacaccgacacttgtaattacactgaattatgtgatttttacaaattattagctgtgtcggcgt 838  Q
    ||||||||||||| | ||  ||||||||||||||| |||||  |||||||||||||||||||||||    
T  4672084 ccgacaccgacacatatagctacactgaattatgtaattttcccaaattattagctgtgtcggcgt 4672149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 782 - 839
Target Start/End: Original strand, 11651142 - 11651199
Alignment:
Q  782 acacttgtaattacactgaattatgtgatttttacaaattattagctgtgtcggcgtg 839  Q
    ||||||||| || ||||||||||||||||||||  |||||||||||||||||| ||||    
T  11651142 acacttgtagttgcactgaattatgtgatttttttaaattattagctgtgtcgacgtg 11651199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 774 - 839
Target Start/End: Original strand, 16303266 - 16303331
Alignment:
Q  774 cgacaccgacacttgtaattacactgaattatgtgatttttacaaattattagctgtgtcggcgtg 839  Q
    ||||||||||||||||||||||||| |||||| | |||||| |||| ||||| || ||||||||||    
T  16303266 cgacaccgacacttgtaattacactaaattatatcattttttcaaaatattatctttgtcggcgtg 16303331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 779 - 839
Target Start/End: Complemental strand, 40613504 - 40613444
Alignment:
Q  779 ccgacacttgtaattacactgaattatgtgatttttacaaattattagctgtgtcggcgtg 839  Q
    ||||||| | |||||||||||||||||||||||||  |||| ||||||| |||||||||||    
T  40613504 ccgacacatataattacactgaattatgtgattttctcaaaatattagcggtgtcggcgtg 40613444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 714 - 839
Target Start/End: Complemental strand, 24343632 - 24343501
Alignment:
Q  714 ctatgaagcacggtcacttctcggattaggtgtgtcccggtgacgtacacgtgtcg-tgcccgacaccgacact-----tgtaattacactgaattatgt 807  Q
    ||||||||||||| |||| ||| || |||| ||||||||||| || ||||| |||| || | |||||||||||      | |||||||||||||||||||    
T  24343632 ctatgaagcacggacactcctcagaataggcgtgtcccggtgtcggacacgcgtcggtgtcggacaccgacacgacacctataattacactgaattatgt 24343533  T
Q  808 gatttttacaaattattagctgtgtcggcgtg 839  Q
     |||||  |||||||||| | |||||||||||    
T  24343532 aattttctcaaattattatccgtgtcggcgtg 24343501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 714 - 839
Target Start/End: Complemental strand, 36635449 - 36635318
Alignment:
Q  714 ctatgaagcacggtcacttctcggattaggtgtgtcccggtgacgtacacgtgtcgtgcccgacac-----cga-cacttgtaattacactgaattatgt 807  Q
    ||||||||||||| ||||  |||||||||| ||||||||||| |  || ||||||||| | |||||     ||| ||| | |||||||||||||||||||    
T  36635449 ctatgaagcacggacactcttcggattaggcgtgtcccggtgtctgacgcgtgtcgtgtctgacactcacacgaacacatataattacactgaattatgt 36635350  T
Q  808 gatttttacaaattattagctgtgtcggcgtg 839  Q
    ||||||  |||||||||||  |||| ||||||    
T  36635349 gattttctcaaattattagtggtgttggcgtg 36635318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 782 - 833
Target Start/End: Complemental strand, 37203315 - 37203264
Alignment:
Q  782 acacttgtaattacactgaattatgtgatttttacaaattattagctgtgtc 833  Q
    ||||||||||||||||| |||||||| |||||| |||||||||||| |||||    
T  37203315 acacttgtaattacactaaattatgtcattttttcaaattattagccgtgtc 37203264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 774 - 839
Target Start/End: Complemental strand, 12708206 - 12708140
Alignment:
Q  774 cgacaccgacacttgtaattacactgaattatgtga-tttttacaaattattagctgtgtcggcgtg 839  Q
    ||||| |||||||||||||||||||||||||| | | |||||| |||||||||| |||||| |||||    
T  12708206 cgacatcgacacttgtaattacactgaattatttcattttttaaaaattattagttgtgtctgcgtg 12708140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 781 - 839
Target Start/End: Original strand, 14126118 - 14126176
Alignment:
Q  781 gacacttgtaattacactgaattatgtgatttttacaaattattagctgtgtcggcgtg 839  Q
    ||||||| ||||||||||||||||||||| |||  |||||||||| | |||||||||||    
T  14126118 gacacttataattacactgaattatgtgactttatcaaattattaacagtgtcggcgtg 14126176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 715 - 785
Target Start/End: Original strand, 30982808 - 30982878
Alignment:
Q  715 tatgaagcacggtcacttctcggattaggtgtgtcccggtgacgtacacgtgtcgtgcccgacaccgacac 785  Q
    |||||||||||| ||||  | |||||||| ||||||||||| || |||||||||||| | |||||||||||    
T  30982808 tatgaagcacggacactctttggattaggcgtgtcccggtgtcggacacgtgtcgtgtctgacaccgacac 30982878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 765 - 835
Target Start/End: Original strand, 31800469 - 31800539
Alignment:
Q  765 tgtcgtgcccgacaccgacacttgtaattacactgaattatgtgatttttacaaattattagctgtgtcgg 835  Q
    |||||||  ||| ||||||||||||||||||| | |||||| | ||||||  |||||||||||||||||||    
T  31800469 tgtcgtgtacgataccgacacttgtaattacattaaattatttaattttttaaaattattagctgtgtcgg 31800539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 713 - 755
Target Start/End: Complemental strand, 40784073 - 40784031
Alignment:
Q  713 cctatgaagcacggtcacttctcggattaggtgtgtcccggtg 755  Q
    |||||||||||||| |||| |||||||||||||||||||||||    
T  40784073 cctatgaagcacggacactcctcggattaggtgtgtcccggtg 40784031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 760 - 813
Target Start/End: Complemental strand, 13307950 - 13307897
Alignment:
Q  760 acacgtgtcgtgcccgacaccgacacttgtaattacactgaattatgtgatttt 813  Q
    |||||||||||| |||||||| |||||||| |||||| |||||||||| |||||    
T  13307950 acacgtgtcgtgtccgacaccaacacttgtgattacattgaattatgtcatttt 13307897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 787 - 832
Target Start/End: Original strand, 14465088 - 14465133
Alignment:
Q  787 tgtaattacactgaattatgtgatttttacaaattattagctgtgt 832  Q
    |||||||||| ||||||||||||||||| ||||||||||| |||||    
T  14465088 tgtaattacattgaattatgtgattttttcaaattattaggtgtgt 14465133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 782 - 839
Target Start/End: Original strand, 27706185 - 27706242
Alignment:
Q  782 acacttgtaattacactgaattatgtgatttttacaaattattagctgtgtcggcgtg 839  Q
    ||||||||||||||||| |||||||||||||||  |||||||||  ||||||| ||||    
T  27706185 acacttgtaattacactaaattatgtgatttttttaaattattaattgtgtcgacgtg 27706242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 774 - 827
Target Start/End: Original strand, 30982878 - 30982931
Alignment:
Q  774 cgacaccgacacttgtaattacactgaattatgtgatttttacaaattattagc 827  Q
    |||||||||||||| ||||||||||||| |||||||||||  ||||| ||||||    
T  30982878 cgacaccgacacttataattacactgaaatatgtgattttctcaaatcattagc 30982931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 775 - 827
Target Start/End: Complemental strand, 848009 - 847957
Alignment:
Q  775 gacaccgacacttgtaattacactgaattatgtgatttttacaaattattagc 827  Q
    |||||||||||||||||||| | |||||||||| |||||  ||||||||||||    
T  848009 gacaccgacacttgtaattatagtgaattatgtaattttctcaaattattagc 847957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 732 - 824
Target Start/End: Complemental strand, 9996941 - 9996849
Alignment:
Q  732 tctcggattaggtgtgtcccggtgacgtacacgtgtcgtgcccgacaccgacacttgtaattacactgaattatgtgatttttacaaattatt 824  Q
    |||| |||||||||||| || ||| || ||||||||  || | |||||||| || | |||||| ||||||||||||||||||  |||||||||    
T  9996941 tctccgattaggtgtgttccagtgtcggacacgtgttatgtctgacaccgagacatataattatactgaattatgtgattttctcaaattatt 9996849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 775 - 811
Target Start/End: Original strand, 28000743 - 28000779
Alignment:
Q  775 gacaccgacacttgtaattacactgaattatgtgatt 811  Q
    ||||||||||||||||||||||||||||||| |||||    
T  28000743 gacaccgacacttgtaattacactgaattatatgatt 28000779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 784 - 836
Target Start/End: Complemental strand, 28720924 - 28720873
Alignment:
Q  784 acttgtaattacactgaattatgtgatttttacaaattattagctgtgtcggc 836  Q
    ||||||| |||||||| ||||| |||||||| |||||||||||||||||||||    
T  28720924 acttgtagttacactgcattatatgattttt-caaattattagctgtgtcggc 28720873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 714 - 749
Target Start/End: Original strand, 3144587 - 3144622
Alignment:
Q  714 ctatgaagcacggtcacttctcggattaggtgtgtc 749  Q
    ||||||||||||| ||||||||||||||||||||||    
T  3144587 ctatgaagcacggacacttctcggattaggtgtgtc 3144622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 714 - 785
Target Start/End: Original strand, 5414101 - 5414172
Alignment:
Q  714 ctatgaagcacggtcacttctcggattaggtgtgtcccggtgacgtacacgtgtcgtgcccgacaccgacac 785  Q
    ||||||||||||| |||| || |||| ||||||||||| ||| |  |||||||||||| ||||||| |||||    
T  5414101 ctatgaagcacggacactccttggataaggtgtgtccctgtgtcagacacgtgtcgtgtccgacactgacac 5414172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 715 - 786
Target Start/End: Complemental strand, 12324038 - 12323967
Alignment:
Q  715 tatgaagcacggtcacttctcggattaggtgtgtcccggtgacgtacacgtgtcgtgcccgacaccgacact 786  Q
    |||||||||||| |||| ||||||| |||||||| || ||| |  ||||||||| || ||||||||||||||    
T  12324038 tatgaagcacggacactcctcggataaggtgtgttcccgtgccacacacgtgtcatgtccgacaccgacact 12323967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 777 - 839
Target Start/End: Complemental strand, 24544038 - 24543975
Alignment:
Q  777 caccgacacttgtaattacactgaattatgtg-atttttacaaattattagctgtgtcggcgtg 839  Q
    |||||||||||||||||||| || |||| ||| ||||||  |||||||||| ||||||||||||    
T  24544038 caccgacacttgtaattacaatgcattaagtgtatttttttaaattattagttgtgtcggcgtg 24543975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 768 - 814
Target Start/End: Original strand, 482232 - 482278
Alignment:
Q  768 cgtgcccgacaccgacacttgtaattacactgaattatgtgattttt 814  Q
    |||| |||||||||||| || |||||||||||||||||||| |||||    
T  482232 cgtgtccgacaccgacagttataattacactgaattatgtgtttttt 482278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 789 - 839
Target Start/End: Complemental strand, 1747256 - 1747206
Alignment:
Q  789 taattacactgaattatgtgatttttacaaattattagctgtgtcggcgtg 839  Q
    |||||| ||||||||||||||||||  ||| |||||||| |||||||||||    
T  1747256 taattaaactgaattatgtgattttctcaatttattagcggtgtcggcgtg 1747206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 775 - 825
Target Start/End: Original strand, 5775359 - 5775409
Alignment:
Q  775 gacaccgacacttgtaattacactgaattatgtgatttttacaaattatta 825  Q
    ||||||||||| | |||||||||| ||||||||||||||  ||||||||||    
T  5775359 gacaccgacacatataattacacttaattatgtgattttctcaaattatta 5775409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 774 - 839
Target Start/End: Original strand, 35723384 - 35723450
Alignment:
Q  774 cgacaccgacacttgtaattacactgaattatgtg-atttttacaaattattagctgtgtcggcgtg 839  Q
    |||||| ||||| | |||||||| ||||||||||| |||||  |||||||||||| |||||||||||    
T  35723384 cgacactgacacatataattacattgaattatgtgtattttctcaaattattagcggtgtcggcgtg 35723450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 777 - 814
Target Start/End: Original strand, 2626018 - 2626055
Alignment:
Q  777 caccgacacttgtaattacactgaattatgtgattttt 814  Q
    ||||||||| ||||||||||| ||||||||||||||||    
T  2626018 caccgacacgtgtaattacaccgaattatgtgattttt 2626055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 774 - 839
Target Start/End: Complemental strand, 13134509 - 13134444
Alignment:
Q  774 cgacaccgacacttgtaattacactgaattatgtgatttttacaaattattagctgtgtcggcgtg 839  Q
    ||||| |||||| | |||||||||| ||||||||||||||   ||||||| ||| |||||||||||    
T  13134509 cgacatcgacacatataattacactaaattatgtgattttcttaaattataagcagtgtcggcgtg 13134444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 19 - 67
Target Start/End: Complemental strand, 14465059 - 14465010
Alignment:
Q  19 gacacgtgtccgaca-tgggacacgtctaatctgaggagtttctgtgctt 67  Q
    ||||||||| ||||| |||||||||||||||||||||||| || ||||||    
T  14465059 gacacgtgttcgacactgggacacgtctaatctgaggagtgtccgtgctt 14465010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 780 - 839
Target Start/End: Complemental strand, 20633535 - 20633479
Alignment:
Q  780 cgacacttgtaattacactgaattatgtgatttttacaaattattagctgtgtcggcgtg 839  Q
    ||||||||||||||||| |||||||||   ||||| |||||||||||| |||||| ||||    
T  20633535 cgacacttgtaattacattgaattatg---ttttttcaaattattagcggtgtcgacgtg 20633479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 789 - 834
Target Start/End: Original strand, 22440615 - 22440660
Alignment:
Q  789 taattacactgaattatgtgatttttacaaattattagctgtgtcg 834  Q
    |||||||||||||||||||||||||  |||||||||| | ||||||    
T  22440615 taattacactgaattatgtgattttctcaaattattaacggtgtcg 22440660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 774 - 839
Target Start/End: Original strand, 32273526 - 32273591
Alignment:
Q  774 cgacaccgacacttgtaattacactgaattatgtgatttttacaaattattagctgtgtcggcgtg 839  Q
    ||||| ||| |||| ||||||  ||||||||||| |||||| ||||||||||| ||||| ||||||    
T  32273526 cgacatcgaaacttataattattctgaattatgttattttttcaaattattagttgtgttggcgtg 32273591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 714 - 755
Target Start/End: Complemental strand, 37203371 - 37203330
Alignment:
Q  714 ctatgaagcacggtcacttctcggattaggtgtgtcccggtg 755  Q
    ||||||||||||| |||||||||||||||  |||||||||||    
T  37203371 ctatgaagcacggacacttctcggattagacgtgtcccggtg 37203330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 776 - 825
Target Start/End: Complemental strand, 56110863 - 56110814
Alignment:
Q  776 acaccgacacttgtaattacactgaattatgtgatttttacaaattatta 825  Q
    |||||||||| | |||||| | ||||||||||||| ||||||||||||||    
T  56110863 acaccgacacatataattatattgaattatgtgatgtttacaaattatta 56110814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0652 (Bit Score: 88; Significance: 7e-42; HSPs: 1)
Name: scaffold0652
Description:

Target: scaffold0652; HSP #1
Raw Score: 88; E-Value: 7e-42
Query Start/End: Original strand, 715 - 838
Target Start/End: Original strand, 403 - 526
Alignment:
Q  715 tatgaagcacggtcacttctcggattaggtgtgtcccggtgacgtacacgtgtcgtgcccgacaccgacacttgtaattacactgaattatgtgattttt 814  Q
    |||||||||||| |||| ||||||||||||||||||||||| || ||||| |||||| ||||||||||||||||||||||||||||||| ||||||||||    
T  403 tatgaagcacggacactcctcggattaggtgtgtcccggtgtcggacacgcgtcgtgtccgacaccgacacttgtaattacactgaattttgtgattttt 502  T
Q  815 acaaattattagctgtgtcggcgt 838  Q
     |||||||||||| ||||||||||    
T  503 tcaaattattagcagtgtcggcgt 526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 85; Significance: 5e-40; HSPs: 74)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 85; E-Value: 5e-40
Query Start/End: Original strand, 716 - 836
Target Start/End: Original strand, 21190998 - 21191118
Alignment:
Q  716 atgaagcacggtcacttctcggattaggtgtgtcccggtgacgtacacgtgtcgtgcccgacaccgacacttgtaattacactgaattatgtgattttta 815  Q
    ||||||||||| |||| ||||||||||| ||||||||| | || |||||||| ||| ||||||||||||||||||||||||||||||||||||||||||     
T  21190998 atgaagcacggacactcctcggattaggcgtgtcccggagtcggacacgtgttgtgtccgacaccgacacttgtaattacactgaattatgtgatttttt 21191097  T
Q  816 caaattattagctgtgtcggc 836  Q
    |||||||||||||||||||||    
T  21191098 caaattattagctgtgtcggc 21191118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 714 - 838
Target Start/End: Original strand, 21576685 - 21576809
Alignment:
Q  714 ctatgaagcacggtcacttctcggattaggtgtgtcccggtgacgtacacgtgtcgtgcccgacaccgacacttgtaattacactgaattatgtgatttt 813  Q
    ||||||||||||| |||| ||||||||||| ||||||| ||| |  |||||||||||| |||||| ||||||||||||||||||||||||||||||||||    
T  21576685 ctatgaagcacggacactcctcggattaggcgtgtcccagtgtcagacacgtgtcgtgtccgacatcgacacttgtaattacactgaattatgtgatttt 21576784  T
Q  814 tacaaattattagctgtgtcggcgt 838  Q
    | ||||||||||||||||| |||||    
T  21576785 ttcaaattattagctgtgttggcgt 21576809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 73; E-Value: 7e-33
Query Start/End: Original strand, 712 - 839
Target Start/End: Complemental strand, 43565002 - 43564877
Alignment:
Q  712 acctatgaagcacggtcacttctcggattaggtgtgtcccggtgacgtacacgtgtcgtgcccgacaccgacacttgtaattacactgaattatgtgatt 811  Q
    ||||||||||||||| |||||||||||||||| ||||||||| | || |||| ||||||| ||||||||||||||| |||||||||| ||||||||||||    
T  43565002 acctatgaagcacggacacttctcggattaggcgtgtcccggcgtcggacacatgtcgtgtccgacaccgacacttataattacactaaattatgtgatt 43564903  T
Q  812 tttacaaattattagctgtgtcggcgtg 839  Q
    ||| ||||||||  | ||||||||||||    
T  43564902 tttccaaattat--gatgtgtcggcgtg 43564877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 714 - 839
Target Start/End: Complemental strand, 31084447 - 31084317
Alignment:
Q  714 ctatgaagcacggtcacttctcggattaggtgtgtcccggtgacgtacacgtgtcgtgcccgacac-----cgacacttgtaattacactgaattatgtg 808  Q
    ||||||| ||||| |||| |||||||||||  |||||| ||| || |||||||||||| |||||||     ||||||||||||||||| |||||||||||    
T  31084447 ctatgaaccacggacactcctcggattaggcatgtcccagtgtcggacacgtgtcgtgtccgacacgacatcgacacttgtaattacattgaattatgtg 31084348  T
Q  809 atttttacaaattattagctgtgtcggcgtg 839  Q
    |||||| ||||||||||||||||||||||||    
T  31084347 attttttcaaattattagctgtgtcggcgtg 31084317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 714 - 835
Target Start/End: Complemental strand, 42893479 - 42893358
Alignment:
Q  714 ctatgaagcacggtcacttctcggattaggtgtgtcccggtgacgtacacgtgtcgtgcccgacaccgacacttgtaattacactgaattatgtgatttt 813  Q
    |||||||||| || |||| |||  |||||| |||||| |||| || |||||||| ||| | ||||||||||||||||||||||||| |||||||||||||    
T  42893479 ctatgaagcatggacactcctcatattaggcgtgtcctggtgtcggacacgtgttgtgtctgacaccgacacttgtaattacactggattatgtgatttt 42893380  T
Q  814 tacaaattattagctgtgtcgg 835  Q
    | ||||||||||||||||||||    
T  42893379 ttcaaattattagctgtgtcgg 42893358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 710 - 839
Target Start/End: Complemental strand, 6247733 - 6247616
Alignment:
Q  710 taacctatgaagcacggtcacttctcggattaggtgtgtcccggtgacgtacacgtgtcgtgcccgacaccgacacttgtaattacactgaattatgtga 809  Q
    ||||||||||||||| | |||||||||||||||||||||||||            || |||| |||||||||||||||||||||||||||||||||||||    
T  6247733 taacctatgaagcacagacacttctcggattaggtgtgtcccg------------tgccgtgtccgacaccgacacttgtaattacactgaattatgtga 6247646  T
Q  810 tttttacaaattattagctgtgtcggcgtg 839  Q
    ||||| ||||||||||| ||||||||||||    
T  6247645 ttttttcaaattattagatgtgtcggcgtg 6247616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 713 - 839
Target Start/End: Complemental strand, 27932355 - 27932229
Alignment:
Q  713 cctatgaagcacggtcacttctcggattaggtgtgtcccggtgacgtacacgtgtcgtgcccgacaccgacacttgtaattacactgaattatgtgattt 812  Q
    ||||||||||||   |||| |||| |||||| |||||| |||| |  |||||||||||| |||||||| | | |||||||||||||||||||||| ||||    
T  27932355 cctatgaagcacaaacactcctcgaattaggcgtgtcctggtgtccgacacgtgtcgtgtccgacaccaagatttgtaattacactgaattatgtaattt 27932256  T
Q  813 ttacaaattattagctgtgtcggcgtg 839  Q
    |  |||||||||||| |||||||||||    
T  27932255 tctcaaattattagcggtgtcggcgtg 27932229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 714 - 839
Target Start/End: Complemental strand, 39698671 - 39698535
Alignment:
Q  714 ctatgaagcacggtcacttctcggattaggtgtgtcccggtgacgtacacgtgtcgtgcccgacaccgacac-----------ttgtaattacactgaat 802  Q
    ||||||||||||| |||| ||||||||||| ||||| ||||| || | || ||||||| |||||||||||||           |||||||||||||||||    
T  39698671 ctatgaagcacggacactcctcggattaggcgtgtctcggtgtcggatacatgtcgtgtccgacaccgacacgacactgacacttgtaattacactgaat 39698572  T
Q  803 tatgtgatttttacaaattattagctgtgtcggcgtg 839  Q
    |||||||||||| |||||||||||||||||| |||||    
T  39698571 tatgtgattttttcaaattattagctgtgtcagcgtg 39698535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 779 - 839
Target Start/End: Complemental strand, 14674323 - 14674263
Alignment:
Q  779 ccgacacttgtaattacactgaattatgtgatttttacaaattattagctgtgtcggcgtg 839  Q
    |||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||    
T  14674323 ccgacacttgtaattacactaaattatgtgattttttcaaattattagctgtgtcggcgtg 14674263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 711 - 839
Target Start/End: Original strand, 28588611 - 28588739
Alignment:
Q  711 aacctatgaagcacggtcacttctcggattaggtgtgtcccggtgacgtacacgtgtcgtgcccgacaccgacacttgtaattacactgaattatgtgat 810  Q
    ||||||||||||| || ||||  |||||||| | |||||| |||| |  | | |||||||| ||||||||||||| | ||||||||||||||||||||||    
T  28588611 aacctatgaagcatggacactcttcggattaagcgtgtcctggtgtcagatatgtgtcgtgtccgacaccgacacctataattacactgaattatgtgat 28588710  T
Q  811 ttttacaaattattagctgtgtcggcgtg 839  Q
    |||  |||||||||| | |||||||||||    
T  28588711 tttctcaaattattaccggtgtcggcgtg 28588739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 764 - 838
Target Start/End: Complemental strand, 15884057 - 15883982
Alignment:
Q  764 gtgtcgtgcccgacaccgacacttgtaattacactgaattatgtgat-ttttacaaattattagctgtgtcggcgt 838  Q
    |||||||| |||||||||||||||||||||||||||||||||||||| ||||  |||||||| |||||||||||||    
T  15884057 gtgtcgtgtccgacaccgacacttgtaattacactgaattatgtgattttttttaaattatttgctgtgtcggcgt 15883982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 716 - 834
Target Start/End: Complemental strand, 43001922 - 43001799
Alignment:
Q  716 atgaagcacggtcacttctcggattaggtgtgtcccggtgacgtacacgtgtcgtgcccgacac-----cgacacttgtaattacactgaattatgtgat 810  Q
    ||||||||||| |||| ||||||||||| |||||| ||||    |||||||||||| |||||||     | |||||||||||||||||||||||||| ||    
T  43001922 atgaagcacggacactcctcggattaggcgtgtccaggtgtttgacacgtgtcgtgtccgacacatcaccaacacttgtaattacactgaattatgtaat 43001823  T
Q  811 ttttacaaattattagctgtgtcg 834  Q
    |||| |||||||||||| ||||||    
T  43001822 tttttcaaattattagcagtgtcg 43001799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 773 - 839
Target Start/End: Complemental strand, 8420087 - 8420021
Alignment:
Q  773 ccgacaccgacacttgtaattacactgaattatgtgatttttacaaattattagctgtgtcggcgtg 839  Q
    |||||||||||||||||||||||| |||||||||| |||||| ||||||||||||| ||||||||||    
T  8420087 ccgacaccgacacttgtaattacattgaattatgttattttttcaaattattagctatgtcggcgtg 8420021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 714 - 839
Target Start/End: Complemental strand, 21522880 - 21522744
Alignment:
Q  714 ctatgaagcacggtcacttctcggattaggtgtgtcccggtgacgtacacgtgtcgtgcccgacaccgacac-----------ttgtaattacactgaat 802  Q
    |||||| |||||| ||||  | |||||||| ||||||||||| || |||||||||||| |||||||||||||           |||||||||||||||||    
T  21522880 ctatgatgcacggacactctttggattaggcgtgtcccggtgccggacacgtgtcgtgtccgacaccgacacgacaccgacaattgtaattacactgaat 21522781  T
Q  803 tatgtgatttttacaaattattagctgtgtcggcgtg 839  Q
    ||||| ||||||  |||||||||||||||||||||||    
T  21522780 tatgttattttttaaaattattagctgtgtcggcgtg 21522744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 714 - 839
Target Start/End: Complemental strand, 21533446 - 21533310
Alignment:
Q  714 ctatgaagcacggtcacttctcggattaggtgtgtcccggtgacgtacacgtgtcgtgcccgacaccgacac-----------ttgtaattacactgaat 802  Q
    |||||| |||||| ||||  | |||||||| ||||||||||| || |||||||||||| |||||||||||||           |||||||||||||||||    
T  21533446 ctatgatgcacggacactctttggattaggcgtgtcccggtgccggacacgtgtcgtgtccgacaccgacacgacaccgacaattgtaattacactgaat 21533347  T
Q  803 tatgtgatttttacaaattattagctgtgtcggcgtg 839  Q
    ||||| ||||||  |||||||||||||||||||||||    
T  21533346 tatgttattttttaaaattattagctgtgtcggcgtg 21533310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 773 - 839
Target Start/End: Complemental strand, 33178085 - 33178019
Alignment:
Q  773 ccgacaccgacacttgtaattacactgaattatgtgatttttacaaattattagctgtgtcggcgtg 839  Q
    |||||||||||||||||||||||||| |||||||||||||||  |||||||||| ||||||||||||    
T  33178085 ccgacaccgacacttgtaattacactaaattatgtgatttttttaaattattagttgtgtcggcgtg 33178019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 774 - 835
Target Start/End: Complemental strand, 7677764 - 7677703
Alignment:
Q  774 cgacaccgacacttgtaattacactgaattatgtgatttttacaaattattagctgtgtcgg 835  Q
    |||||||||||||| ||||| |||||||||||||||||||| ||||||||||||||||||||    
T  7677764 cgacaccgacacttctaattgcactgaattatgtgattttttcaaattattagctgtgtcgg 7677703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 774 - 839
Target Start/End: Original strand, 13287399 - 13287464
Alignment:
Q  774 cgacaccgacacttgtaattacactgaattatgtgatttttacaaattattagctgtgtcggcgtg 839  Q
    ||||||||||||||||| ||||||||||||||||||||||| |||||||||| |||||||| ||||    
T  13287399 cgacaccgacacttgtagttacactgaattatgtgattttttcaaattattatctgtgtcgacgtg 13287464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 728 - 839
Target Start/End: Complemental strand, 15382590 - 15382471
Alignment:
Q  728 cacttctcggattaggtgtgtcccggtgacgtacacgtgtcgtgccc------gacaccgacacttgtaattacactgaattatgtga--tttttacaaa 819  Q
    |||| ||||||||||| ||||||||||| || ||| |||||||| ||      |||||||||||||||||||| |||||||||| |||  ||||| ||||    
T  15382590 cactcctcggattaggcgtgtcccggtgtcggacatgtgtcgtgtccaacaccgacaccgacacttgtaattatactgaattatatgattttttttcaaa 15382491  T
Q  820 ttattagctgtgtcggcgtg 839  Q
    ||||||||||||||||||||    
T  15382490 ttattagctgtgtcggcgtg 15382471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 774 - 835
Target Start/End: Original strand, 37328844 - 37328905
Alignment:
Q  774 cgacaccgacacttgtaattacactgaattatgtgatttttacaaattattagctgtgtcgg 835  Q
    |||||||||||| ||||||||||||||||| |||||||||||||||||||| ||||||||||    
T  37328844 cgacaccgacacatgtaattacactgaattttgtgatttttacaaattatttgctgtgtcgg 37328905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 774 - 838
Target Start/End: Complemental strand, 19579760 - 19579696
Alignment:
Q  774 cgacaccgacacttgtaattacactgaattatgtgatttttacaaattattagctgtgtcggcgt 838  Q
    |||||||||||||||||||| |||| ||||||||||||||  |||||||||||||||||||||||    
T  19579760 cgacaccgacacttgtaattgcactaaattatgtgattttctcaaattattagctgtgtcggcgt 19579696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 773 - 839
Target Start/End: Original strand, 24906300 - 24906366
Alignment:
Q  773 ccgacaccgacacttgtaattacactgaattatgtgatttttacaaattattagctgtgtcggcgtg 839  Q
    |||| |||||||||||||||||||||||||||||| |||||| |||||||||| |||||| ||||||    
T  24906300 ccgataccgacacttgtaattacactgaattatgtcattttttcaaattattatctgtgttggcgtg 24906366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 774 - 839
Target Start/End: Complemental strand, 10298628 - 10298563
Alignment:
Q  774 cgacaccgacacttgtaattacactgaattatgtgatttttacaaattattagctgtgtcggcgtg 839  Q
    ||||||||||||||||||||||| || ||||||||| |||| ||||||||||| ||||||||||||    
T  10298628 cgacaccgacacttgtaattacattgtattatgtgactttttcaaattattagttgtgtcggcgtg 10298563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 774 - 835
Target Start/End: Complemental strand, 41633794 - 41633733
Alignment:
Q  774 cgacaccgacacttgtaattacactgaattatgtgatttttacaaattattagctgtgtcgg 835  Q
    ||||||||||| |||||||||||||||||||||| | |||| ||||||||||||||||||||    
T  41633794 cgacaccgacatttgtaattacactgaattatgtaaatttttcaaattattagctgtgtcgg 41633733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 775 - 835
Target Start/End: Original strand, 21351906 - 21351966
Alignment:
Q  775 gacaccgacacttgtaattacactgaattatgtgatttttacaaattattagctgtgtcgg 835  Q
    ||||||||||||||||||||||||||||||||||| |||| | ||||||||| ||||||||    
T  21351906 gacaccgacacttgtaattacactgaattatgtgactttttccaattattagttgtgtcgg 21351966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 736 - 832
Target Start/End: Original strand, 30502350 - 30502446
Alignment:
Q  736 ggattaggtgtgtcccggtgacgtacacgtgtcgtgcccgacaccgacacttgtaattacactgaattatgtgatttttacaaattattagctgtgt 832  Q
    ||||||||  |||||| ||| || ||| |||||||| ||||||||||||| | |||||||||||||||| ||||||||  |||||||||||| ||||    
T  30502350 ggattaggcatgtcccagtgtcggacatgtgtcgtgtccgacaccgacacatataattacactgaattaagtgattttctcaaattattagcggtgt 30502446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 736 - 832
Target Start/End: Original strand, 30542693 - 30542789
Alignment:
Q  736 ggattaggtgtgtcccggtgacgtacacgtgtcgtgcccgacaccgacacttgtaattacactgaattatgtgatttttacaaattattagctgtgt 832  Q
    ||||||||  |||||| ||| || ||| |||||||| ||||||||||||| | |||||||||||||||| ||||||||  |||||||||||| ||||    
T  30542693 ggattaggcatgtcccagtgtcggacatgtgtcgtgtccgacaccgacacatataattacactgaattaagtgattttctcaaattattagcggtgt 30542789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 776 - 838
Target Start/End: Original strand, 17177025 - 17177087
Alignment:
Q  776 acaccgacacttgtaattacactgaattatgtgatttttacaaattattagctgtgtcggcgt 838  Q
    ||||||||||||||||||||| |||||| | |||||||| ||||||||||||||||| |||||    
T  17177025 acaccgacacttgtaattacaatgaattttttgattttttcaaattattagctgtgttggcgt 17177087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 774 - 836
Target Start/End: Complemental strand, 21542089 - 21542027
Alignment:
Q  774 cgacaccgacacttgtaattacactgaattatgtgatttttacaaattattagctgtgtcggc 836  Q
    |||||||||||||||||||||||||||||||||| || |||  |||||||||| |||||||||    
T  21542089 cgacaccgacacttgtaattacactgaattatgttatctttttaaattattagttgtgtcggc 21542027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 778 - 839
Target Start/End: Original strand, 7218271 - 7218332
Alignment:
Q  778 accgacacttgtaattacactgaattatgtgatttttacaaattattagctgtgtcggcgtg 839  Q
    ||||||||||||||||||||||||||||||||||| |  |||||||||||| ||||| ||||    
T  7218271 accgacacttgtaattacactgaattatgtgatttatttaaattattagctctgtcgacgtg 7218332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 775 - 839
Target Start/End: Complemental strand, 30135372 - 30135307
Alignment:
Q  775 gacaccgacacttgtaattacactgaattatgtgat-ttttacaaattattagctgtgtcggcgtg 839  Q
    |||||||||||||||||||||| ||| ||||||||| |||| ||||||||||| ||||||||||||    
T  30135372 gacaccgacacttgtaattacaatgagttatgtgatttttttcaaattattagttgtgtcggcgtg 30135307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 718 - 839
Target Start/End: Complemental strand, 4105374 - 4105251
Alignment:
Q  718 gaagcacggtcacttctcggattaggtgtgtcccggtgacgtacacgtgtcgtgcccgacaccgacacttgtaattacactgaattatgtga--ttttta 815  Q
    ||||||||| |||| ||||||||||| ||||||| ||  |  |||| | ||| | | || ||| ||||||||||||||||||||||||||||  |||||     
T  4105374 gaagcacggacactcctcggattaggcgtgtcccagtatcagacacatatcgagtctgatacctacacttgtaattacactgaattatgtgatctttttt 4105275  T
Q  816 caaattattagctgtgtcggcgtg 839  Q
    ||||||||||| | ||||||||||    
T  4105274 caaattattagttatgtcggcgtg 4105251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 728 - 824
Target Start/End: Complemental strand, 26312874 - 26312778
Alignment:
Q  728 cacttctcggattaggtgtgtcccggtgacgtacacgtgtcgtgcccgacaccgacacttgtaattacactgaattatgtgatttttacaaattatt 824  Q
    |||| |||||||||||||||||| |||| |  |||||| ||||| |||||||||| || | ||||||||||||||||  |||||||  |||||||||    
T  26312874 cactcctcggattaggtgtgtcctggtgtcagacacgtatcgtgtccgacaccgatacatataattacactgaattaattgattttctcaaattatt 26312778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 716 - 833
Target Start/End: Original strand, 18421779 - 18421900
Alignment:
Q  716 atgaagcacggtcacttctcggattag--gtgt--gtcccggtgacgtacacgtgtcgtgcccgacaccgacacttgtaattacactgaattatgtgatt 811  Q
    ||||||||| | |||| ||||||||||  ||||  ||||||||| || ||| |||||||| ||||| ||||||| | ||||||||||| |||||||||||    
T  18421779 atgaagcacagacactcctcggattagacgtgtcagtcccggtgccggacatgtgtcgtgtccgacgccgacacatataattacactggattatgtgatt 18421878  T
Q  812 tttacaaattattagctgtgtc 833  Q
    ||  |||||||| ||| |||||    
T  18421879 ttctcaaattatcagcagtgtc 18421900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 774 - 836
Target Start/End: Complemental strand, 3966562 - 3966500
Alignment:
Q  774 cgacaccgacacttgtaattacactgaattatgtgatttttacaaattattagctgtgtcggc 836  Q
    |||||||||||| | ||||||||||||||| |||||||||  |||||||||||| ||||||||    
T  3966562 cgacaccgacacatataattacactgaattgtgtgattttctcaaattattagcggtgtcggc 3966500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 789 - 839
Target Start/End: Complemental strand, 22013458 - 22013408
Alignment:
Q  789 taattacactgaattatgtgatttttacaaattattagctgtgtcggcgtg 839  Q
    |||||||||| |||||||| |||||| ||||||||||||||||||||||||    
T  22013458 taattacactaaattatgtaatttttccaaattattagctgtgtcggcgtg 22013408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 774 - 836
Target Start/End: Complemental strand, 30183608 - 30183546
Alignment:
Q  774 cgacaccgacacttgtaattacactgaattatgtgatttttacaaattattagctgtgtcggc 836  Q
    ||||||||||||||||||||| || |||| ||||||| ||| ||||||||||| |||||||||    
T  30183608 cgacaccgacacttgtaattaaaccgaataatgtgatattttcaaattattagttgtgtcggc 30183546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 774 - 839
Target Start/End: Complemental strand, 2436981 - 2436916
Alignment:
Q  774 cgacaccgacacttgtaattacactgaattatgtgatttttacaaattattagctgtgtcggcgtg 839  Q
    |||||||||||| | |||| |||  |||||||||||||||| |||||||||||| |||||||||||    
T  2436981 cgacaccgacacatataatcacaacgaattatgtgatttttgcaaattattagcggtgtcggcgtg 2436916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 767 - 835
Target Start/End: Complemental strand, 14422968 - 14422902
Alignment:
Q  767 tcgtgcccgacaccgacacttgtaattacactgaattatgtgatttttacaaattattagctgtgtcgg 835  Q
    ||||| |||||| ||| |||| ||||||||||||||||||||||||||  |||||||||||||| ||||    
T  14422968 tcgtgtccgacatcgaaacttataattacactgaattatgtgattttt--aaattattagctgtatcgg 14422902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 714 - 839
Target Start/End: Complemental strand, 17123166 - 17123042
Alignment:
Q  714 ctatgaagcacggtcacttctcggattaggtgtgtcccggtgacgtacacgtgtcgtgcccgacaccgacacttgtaattacactgaattatgtgatttt 813  Q
    ||||||||||||| |||| ||||||||||| ||||||| ||| || ||| || ||||| || |||||||||  | |||||  |||  |||||||||||||    
T  17123166 ctatgaagcacggacactcctcggattaggcgtgtccc-gtgtcggacatgtttcgtgtccaacaccgacatatataattgtacttgattatgtgatttt 17123068  T
Q  814 tacaaattattagctgtgtcggcgtg 839  Q
      |||||||||||| |||| ||||||    
T  17123067 ctcaaattattagcggtgttggcgtg 17123042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 714 - 827
Target Start/End: Original strand, 21194063 - 21194176
Alignment:
Q  714 ctatgaagcacggtcacttctcggattaggtgtgtcccggtgacgtacacgtgtcgtgcccgacaccgacacttgtaattacactgaattatgtgatttt 813  Q
    |||| |||||||| |||| ||||||||||| ||| ||||||| |  ||| |||||||| || ||||| | || | |||||||||||||| ||||||||||    
T  21194063 ctataaagcacggacactcctcggattaggcgtgccccggtgtctgacatgtgtcgtgtccaacaccaatacctataattacactgaatgatgtgatttt 21194162  T
Q  814 tacaaattattagc 827  Q
      ||||||| ||||    
T  21194163 ctcaaattactagc 21194176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 781 - 833
Target Start/End: Original strand, 15405062 - 15405114
Alignment:
Q  781 gacacttgtaattacactgaattatgtgatttttacaaattattagctgtgtc 833  Q
    |||||||||||||||| |||||||| |||||||| ||||||||||| ||||||    
T  15405062 gacacttgtaattacattgaattatatgattttttcaaattattagttgtgtc 15405114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 764 - 836
Target Start/End: Original strand, 16203785 - 16203857
Alignment:
Q  764 gtgtcgtgcccgacaccgacacttgtaattacactgaattatgtgatttttacaaattattagctgtgtcggc 836  Q
    ||||| || ||||||||||||| | |||||||||| ||||||| ||||||  |||||||||||| ||||||||    
T  16203785 gtgtcttgtccgacaccgacacatataattacactaaattatgagattttctcaaattattagcagtgtcggc 16203857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 774 - 833
Target Start/End: Original strand, 6471889 - 6471948
Alignment:
Q  774 cgacaccgacacttgtaattacactgaattatgtgatttttacaaattattagctgtgtc 833  Q
    ||||||| |||| | |||||||||||||||||||||||||  |||||||||||| |||||    
T  6471889 cgacacccacacatataattacactgaattatgtgattttctcaaattattagccgtgtc 6471948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 713 - 823
Target Start/End: Complemental strand, 14873642 - 14873527
Alignment:
Q  713 cctatgaagcacggtcacttctcggattaggtgtgtcccggtgacgtacacgtgtcgtgccc-----gacaccgacacttgtaattacactgaattatgt 807  Q
    |||||||||||||| |||| ||||||||||| |||||||||||  | |||||||| | | ||     ||||||||||| | |||||||||| ||||||||    
T  14873642 cctatgaagcacggacactcctcggattaggcgtgtcccggtgttggacacgtgttgcgtccgacatgacaccgacacatataattacactaaattatgt 14873543  T
Q  808 gatttttacaaattat 823  Q
    | ||||  ||||||||    
T  14873542 gcttttctcaaattat 14873527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 712 - 839
Target Start/End: Original strand, 32630673 - 32630800
Alignment:
Q  712 acctatgaagcacggtcacttctcggattaggtgtgtcccggtgacgtacacgtgtcgtgcccgacaccgacacttgtaattacactgaattatgtgatt 811  Q
    ||||||||||||  | |||| |||| |||||||||||| |  || || |||||||||||  ||||||| ||||| | |||||||| |||||||| | |||    
T  32630673 acctatgaagcatagacactcctcgaattaggtgtgtctcaatgtcggacacgtgtcgtatccgacactgacacatataattacattgaattatataatt 32630772  T
Q  812 tttacaaattattagctgtgtcggcgtg 839  Q
    ||  |||||||||| | ||||| |||||    
T  32630773 ttctcaaattattatcggtgtcagcgtg 32630800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 777 - 839
Target Start/End: Complemental strand, 41995525 - 41995465
Alignment:
Q  777 caccgacacttgtaattacactgaattatgtgatttttacaaattattagctgtgtcggcgtg 839  Q
    |||||||||||  ||||||| ||||||||||||||||| | ||||||||| ||||||||||||    
T  41995525 caccgacactt--aattacattgaattatgtgattttttcgaattattagttgtgtcggcgtg 41995465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 714 - 813
Target Start/End: Complemental strand, 42029871 - 42029772
Alignment:
Q  714 ctatgaagcacggtcacttctcggattaggtgtgtcccggtgacgtacacgtgtcgtgcccgacaccgacacttgtaattacactgaattatgtgatttt 813  Q
    |||||| |||||| |||| ||||||| ||| |||||   |||||  ||| |||||||| |||||||||| || | |||||||| ||||||||||||||||    
T  42029871 ctatgatgcacggacactcctcggataaggcgtgtctacgtgacagacatgtgtcgtgtccgacaccgatacatataattacattgaattatgtgatttt 42029772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 781 - 839
Target Start/End: Original strand, 6326304 - 6326362
Alignment:
Q  781 gacacttgtaattacactgaattatgtgatttttacaaattattagctgtgtcggcgtg 839  Q
    ||||||||||||||||||||||||||| |||||  ||||||| ||||  ||||||||||    
T  6326304 gacacttgtaattacactgaattatgtaattttctcaaattactagcgatgtcggcgtg 6326362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 793 - 839
Target Start/End: Original strand, 19552562 - 19552608
Alignment:
Q  793 tacactgaattatgtgatttttacaaattattagctgtgtcggcgtg 839  Q
    |||||| ||||||||||||||| |||||||||| |||||||||||||    
T  19552562 tacacttaattatgtgattttttcaaattattaactgtgtcggcgtg 19552608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 709 - 779
Target Start/End: Complemental strand, 30098461 - 30098391
Alignment:
Q  709 ataacctatgaagcacggtcacttctcggattaggtgtgtcccggtgacgtacacgtgtcgtgcccgacac 779  Q
    |||| ||||||||||||| || | |||||||||||||||||| |||| |  |||||||||||| |||||||    
T  30098461 ataaactatgaagcacggacattcctcggattaggtgtgtcctggtgtctgacacgtgtcgtgtccgacac 30098391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 711 - 836
Target Start/End: Original strand, 38464310 - 38464426
Alignment:
Q  711 aacctatgaagcacggtcacttctcggattaggtgtgtcccggtgacgtacacgtgtcgtgcccgacaccgacacttgtaattacactgaattatgtgat 810  Q
    |||||||||||||| | |||| ||||||||||||||||||||||| || ||| ||         | ||| ||||||| ||||| || ||||| |||||||    
T  38464310 aacctatgaagcacagacactcctcggattaggtgtgtcccggtgtcggacatgt---------gccactgacacttataatttcaatgaataatgtgat 38464400  T
Q  811 ttttacaaattattagctgtgtcggc 836  Q
    |||  ||||||||||| |||||||||    
T  38464401 tttctcaaattattagttgtgtcggc 38464426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 728 - 839
Target Start/End: Original strand, 7997120 - 7997231
Alignment:
Q  728 cacttctcggattaggtgtgtcccggtgacgtacacgtgtc-gtgcccgacaccgacacttgtaattacactgaattatgtgatttttacaaattattag 826  Q
    ||||||||| ||||||||||||| | || || ||||| ||| ||| ||||||| ||||||| ||||||||||| ||||| | |||||  ||||||||||     
T  7997120 cacttctcgaattaggtgtgtcctgatgtcggacacgcgtcagtgtccgacac-gacacttataattacactgtattatatcattttctcaaattattat 7997218  T
Q  827 ctgtgtcggcgtg 839  Q
    | |||| ||||||    
T  7997219 ccgtgttggcgtg 7997231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 774 - 814
Target Start/End: Complemental strand, 12199989 - 12199949
Alignment:
Q  774 cgacaccgacacttgtaattacactgaattatgtgattttt 814  Q
    ||||||||||||||||||||  |||||||||||||||||||    
T  12199989 cgacaccgacacttgtaattgtactgaattatgtgattttt 12199949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 775 - 839
Target Start/End: Original strand, 36642763 - 36642827
Alignment:
Q  775 gacaccgacacttgtaattacactgaattatgtgatttttacaaattattagctgtgtcggcgtg 839  Q
    ||||||||||||| || ||||||| || ||||| | |||| |||||||||| |||||||||||||    
T  36642763 gacaccgacacttatatttacactaaaatatgtcactttttcaaattattaactgtgtcggcgtg 36642827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 717 - 785
Target Start/End: Original strand, 39268541 - 39268609
Alignment:
Q  717 tgaagcacggtcacttctcggattaggtgtgtcccggtgacgtacacgtgtcgtgcccgacaccgacac 785  Q
    |||||||||| |||| ||||||||||| ||||||| ||| || |||| ||||||| || ||||||||||    
T  39268541 tgaagcacggacactcctcggattaggcgtgtcccagtgtcggacacatgtcgtgtccaacaccgacac 39268609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 774 - 826
Target Start/End: Complemental strand, 40131680 - 40131628
Alignment:
Q  774 cgacaccgacacttgtaattacactgaattatgtgatttttacaaattattag 826  Q
    ||||||||| | || |||||| ||||||||||||||||||| |||||||||||    
T  40131680 cgacaccgatatttataattaaactgaattatgtgattttttcaaattattag 40131628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 780 - 832
Target Start/End: Complemental strand, 131816 - 131762
Alignment:
Q  780 cgacacttgtaattacactgaattat--gtgatttttacaaattattagctgtgt 832  Q
    |||| |||||||||||||| ||||||  ||||||||| |||||||||||||||||    
T  131816 cgacgcttgtaattacacttaattatatgtgattttttcaaattattagctgtgt 131762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 774 - 833
Target Start/End: Original strand, 5894833 - 5894892
Alignment:
Q  774 cgacaccgacacttgtaattacactgaattatgtgatttttacaaattattagctgtgtc 833  Q
    ||||||||||||||||| ||| | | |||||| |||||||| ||||||||||| ||||||    
T  5894833 cgacaccgacacttgtagttagattaaattatatgattttttcaaattattagttgtgtc 5894892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 774 - 833
Target Start/End: Original strand, 41091257 - 41091316
Alignment:
Q  774 cgacaccgacacttgtaattacactgaattatgtgatttttacaaattattagctgtgtc 833  Q
    ||||| |||||| | |||||||||||||||||||||||||  ||||| |||||| |||||    
T  41091257 cgacatcgacacatataattacactgaattatgtgattttctcaaatcattagcagtgtc 41091316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 774 - 836
Target Start/End: Complemental strand, 11685998 - 11685936
Alignment:
Q  774 cgacaccgacacttgtaattacactgaattatgtgatttttacaaattattagctgtgtcggc 836  Q
    |||||||||||| | |||||||||| ||||||| || |||  |||||||||||| ||||||||    
T  11685998 cgacaccgacacatataattacactaaattatgcgactttctcaaattattagcggtgtcggc 11685936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 714 - 839
Target Start/End: Original strand, 16304366 - 16304489
Alignment:
Q  714 ctatgaagcacggtcacttctcggattaggtgtgtcccggtgacgtacacgtgtcgtgcccgacaccgacacttgtaattacactgaattatgtgatttt 813  Q
    ||||||||||||| || | ||||||||||  ||||| ||||| ||  ||||||||||| |||| || |||||    ||||||||| |||||| ||||||     
T  16304366 ctatgaagcacggacattcctcggattagacgtgtctcggtgtcgggcacgtgtcgtgtccgatactgacac--acaattacactaaattatatgattta 16304463  T
Q  814 tacaaattattagctgtgtcggcgtg 839  Q
    | ||||| || ||| |||||||||||    
T  16304464 ttcaaataatcagcggtgtcggcgtg 16304489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 785 - 835
Target Start/End: Original strand, 22299492 - 22299541
Alignment:
Q  785 cttgtaattacactgaattatgtgatttttacaaattattagctgtgtcgg 835  Q
    |||||||||| ||||||| |||||||||||  |||||||||||||||||||    
T  22299492 cttgtaattatactgaatcatgtgattttt-taaattattagctgtgtcgg 22299541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 716 - 813
Target Start/End: Original strand, 23015926 - 23016028
Alignment:
Q  716 atgaagcacggtcacttctcggattaggtgtgtcccggtgacgtacacgtgtcgtgcccgacac-----cgacacttgtaattacactgaattatgtgat 810  Q
    ||||||| ||| |||| ||||||||||| |||||||  || || |||| ||||||| |||| ||     |||||| | ||||||||||||||||||||||    
T  23015926 atgaagctcggacactcctcggattaggcgtgtcccaatgtcggacacatgtcgtgtccgatacaacatcgacacctataattacactgaattatgtgat 23016025  T
Q  811 ttt 813  Q
    |||    
T  23016026 ttt 23016028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #65
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 789 - 839
Target Start/End: Complemental strand, 27144507 - 27144457
Alignment:
Q  789 taattacactgaattatgtgatttttacaaattattagctgtgtcggcgtg 839  Q
    |||||||||| |||||||||||||   |||||||||||| |||||||||||    
T  27144507 taattacactaaattatgtgatttcctcaaattattagcggtgtcggcgtg 27144457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #66
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 718 - 839
Target Start/End: Original strand, 30098982 - 30099103
Alignment:
Q  718 gaagcacggtcacttctcggattaggtgtgtcccggtgacgtacacgtgtcgtgcccgacaccgacacttgtaattacactgaattatgtgatt-tttac 816  Q
    ||||||||  |||| || |||| ||| ||||||| ||| |  |||||||||||  ||||||||||||| | ||||||||| |||||||| |||| ||||     
T  30098982 gaagcacgaacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtatccgacaccgacacatataattacacagaattatgcgattgtttaa 30099081  T
Q  817 aaattattagctgtgtcggcgtg 839  Q
    ||| | |||| ||||||||||||    
T  30099082 aaaat-ttagttgtgtcggcgtg 30099103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #67
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 774 - 832
Target Start/End: Complemental strand, 36838602 - 36838544
Alignment:
Q  774 cgacaccgacacttgtaattacactgaattatgtgatttttacaaattattagctgtgt 832  Q
    |||||||||||| | |||||||||| |||||||| |||||  |||||||||||| ||||    
T  36838602 cgacaccgacacatataattacactaaattatgtaattttctcaaattattagcggtgt 36838544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #68
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 780 - 825
Target Start/End: Original strand, 5467984 - 5468029
Alignment:
Q  780 cgacacttgtaattacactgaattatgtgatttttacaaattatta 825  Q
    |||||| | |||||||||||||||||||||||||  ||||||||||    
T  5467984 cgacacctataattacactgaattatgtgattttatcaaattatta 5468029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #69
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 774 - 839
Target Start/End: Complemental strand, 6035541 - 6035477
Alignment:
Q  774 cgacaccgacacttgtaattacactgaattatgtgatttttacaaattattagctgtgtcggcgtg 839  Q
    |||||||||||  | ||||||||||||||||| | |||| | |||||||||||| |||||||||||    
T  6035541 cgacaccgacaaatataattacactgaattatattatttct-caaattattagcggtgtcggcgtg 6035477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #70
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 781 - 833
Target Start/End: Complemental strand, 17088337 - 17088284
Alignment:
Q  781 gacacttgtaattacactgaattatgtgat-ttttacaaattattagctgtgtc 833  Q
    |||||||||||| ||||| ||||||||||| |||| ||||||||||| ||||||    
T  17088337 gacacttgtaatcacactaaattatgtgatttttttcaaattattagatgtgtc 17088284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #71
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 775 - 839
Target Start/End: Original strand, 19028999 - 19029066
Alignment:
Q  775 gacaccgacacttgtaattacactgaattatgtga---tttttacaaattattagctgtgtcggcgtg 839  Q
    ||||| ||||||||| ||||||||| |||||||||   ||||| |||||||||| |||| ||||||||    
T  19028999 gacacagacacttgtgattacactggattatgtgatttttttttcaaattattaactgtatcggcgtg 19029066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #72
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 774 - 839
Target Start/End: Complemental strand, 21814320 - 21814255
Alignment:
Q  774 cgacaccgacacttgtaattacactgaattatgtgatttttacaaattattagctgtgtcggcgtg 839  Q
    |||||||||||| | ||||||||||| ||| |||||||||   |||  ||||||||||||||||||    
T  21814320 cgacaccgacacatataattacactgcattttgtgattttctaaaaaaattagctgtgtcggcgtg 21814255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #73
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 798 - 839
Target Start/End: Original strand, 22611761 - 22611802
Alignment:
Q  798 tgaattatgtgatttttacaaattattagctgtgtcggcgtg 839  Q
    ||||||||||||||||| |||||||||||  |||||||||||    
T  22611761 tgaattatgtgattttttcaaattattaggagtgtcggcgtg 22611802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #74
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 746 - 827
Target Start/End: Original strand, 23012380 - 23012461
Alignment:
Q  746 tgtcccggtgacgtacacgtgtcgtgcccgacaccgacacttgtaattacactgaattatgtgatttttacaaattattagc 827  Q
    |||||||||| |  ||| |||||||| || |||||||||| | |||||||| | |||||| |||||||  ||||||||||||    
T  23012380 tgtcccggtgtcagacatgtgtcgtgtccaacaccgacacatataattacattaaattatatgattttctcaaattattagc 23012461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 83; Significance: 7e-39; HSPs: 70)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 83; E-Value: 7e-39
Query Start/End: Original strand, 716 - 838
Target Start/End: Original strand, 2438661 - 2438783
Alignment:
Q  716 atgaagcacggtcacttctcggattaggtgtgtcccggtgacgtacacgtgtcgtgcccgacaccgacacttgtaattacactgaattatgtgattttta 815  Q
    ||||||||||| |||| ||||||||||| ||||||||||| || ||| |||||||| ||||||||||||||||||||||||||||||||||||||||||     
T  2438661 atgaagcacggacactcctcggattaggcgtgtcccggtgtcggacatgtgtcgtgtccgacaccgacacttgtaattacactgaattatgtgatttttt 2438760  T
Q  816 caaattattagctgtgtcggcgt 838  Q
     ||||||||||||||||| ||||    
T  2438761 gaaattattagctgtgtcagcgt 2438783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 714 - 839
Target Start/End: Complemental strand, 37559096 - 37558971
Alignment:
Q  714 ctatgaagcacggtcacttctcggattaggtgtgtcccggtgacgtacacgtgtcgtgcccgacaccgacacttgtaattacactgaattatgtgatttt 813  Q
    ||||||||||||| |||| ||||||||| | |||| |||||| || |||||||||  | |||||||||||||||||||||||| ||||||||||||||||    
T  37559096 ctatgaagcacggacactcctcggattaagcgtgtaccggtgtcggacacgtgtcaagtccgacaccgacacttgtaattacattgaattatgtgatttt 37558997  T
Q  814 tacaaattattagctgtgtcggcgtg 839  Q
    ||||||||||||||||||||||||||    
T  37558996 tacaaattattagctgtgtcggcgtg 37558971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 78; E-Value: 7e-36
Query Start/End: Original strand, 714 - 839
Target Start/End: Original strand, 18840953 - 18841078
Alignment:
Q  714 ctatgaagcacggtcacttctcggattaggtgtgtcccggtgacgtacacgtgtcgtgcccgacaccgacacttgtaattacactgaattatgtgatttt 813  Q
    ||||||||||||| |||| ||||||||||||||||||||||| || ||| |||||||| | |||||||||||||||||||||||| |||||||| |||||    
T  18840953 ctatgaagcacggacactcctcggattaggtgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacacttgtaattacacttaattatgtaatttt 18841052  T
Q  814 tacaaattattagctgtgtcggcgtg 839  Q
    | ||||||||||| |||||| |||||    
T  18841053 ttcaaattattagttgtgtcagcgtg 18841078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 78; E-Value: 7e-36
Query Start/End: Original strand, 714 - 839
Target Start/End: Original strand, 38117099 - 38117224
Alignment:
Q  714 ctatgaagcacggtcacttctcggattaggtgtgtcccggtgacgtacacgtgtcgtgcccgacaccgacacttgtaattacactgaattatgtgatttt 813  Q
    ||||||||||||| |||  ||||||||||| ||||||||||| || |||||||| ||| |||||||| |||||||||||||||| ||| |||||||||||    
T  38117099 ctatgaagcacggacacccctcggattaggcgtgtcccggtgtcggacacgtgttgtgtccgacaccaacacttgtaattacaccgaagtatgtgatttt 38117198  T
Q  814 tacaaattattagctgtgtcggcgtg 839  Q
    | ||||||||||||||||||||||||    
T  38117199 ttcaaattattagctgtgtcggcgtg 38117224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 713 - 839
Target Start/End: Complemental strand, 15972993 - 15972867
Alignment:
Q  713 cctatgaagcacggtcacttctcggattaggtgtgtcccggtgacgtacacgtgtcgtgcccgacaccgacacttgtaattacactgaattatgtgattt 812  Q
    |||||||||||||| || |  |||||||||||||||||||| | || |||||||||||| ||||||||||||||||||||||||||||||| ||| ||||    
T  15972993 cctatgaagcacggacattcttcggattaggtgtgtcccggcgtcggacacgtgtcgtgtccgacaccgacacttgtaattacactgaattgtgtaattt 15972894  T
Q  813 ttacaaattattagctgtgtcggcgtg 839  Q
    || ||||||||||  ||||||||||||    
T  15972893 tttcaaattattaattgtgtcggcgtg 15972867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 714 - 839
Target Start/End: Original strand, 30404790 - 30404915
Alignment:
Q  714 ctatgaagcacggtcacttctcggattaggtgtgtcccggtgacgtacacgtgtcgtgcccgacaccgacacttgtaattacactgaattatgtgatttt 813  Q
    |||||||||||   | |||||| |||||||  ||||| |||| || ||| |||||||| ||||| |||||||||||||||||||||||||||||||||||    
T  30404790 ctatgaagcacaaacgcttctcagattaggcatgtcctggtgtcggacatgtgtcgtgtccgacgccgacacttgtaattacactgaattatgtgatttt 30404889  T
Q  814 tacaaattattagctgtgtcggcgtg 839  Q
    | |||||||||| | |||||||||||    
T  30404890 ttcaaattattaaccgtgtcggcgtg 30404915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 715 - 839
Target Start/End: Complemental strand, 28596587 - 28596466
Alignment:
Q  715 tatgaagcacggtcacttctcggattaggtgtgtcccggtgacgtacacgtgtcgtgcccgacaccgacacttgtaattacactgaattatgtgat-ttt 813  Q
    |||||||||||| |||| ||||||||||| ||||||  ||| || |||||||||||| ||||||||||||||| |||||||||||| ||||||||| |||    
T  28596587 tatgaagcacggacactcctcggattaggagtgtccgagtgtcggacacgtgtcgtgtccgacaccgacacttataattacactgacttatgtgatgttt 28596488  T
Q  814 tacaaattattagctgtgtcggcgtg 839  Q
    | ||    ||||||||||||||||||    
T  28596487 ttca----attagctgtgtcggcgtg 28596466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 722 - 836
Target Start/End: Complemental strand, 5040845 - 5040729
Alignment:
Q  722 cacggtcacttctcggattaggtgtgtcccggtgacgtacacgtgtcgtgcccgacaccgacacttgtaattacactgaattatgtgat--ttttacaaa 819  Q
    ||||| |||| || ||| |||| ||||||||| | || |||| ||||||| |||||||||||||||||||||||| |||||||||||||  |||| ||||    
T  5040845 cacggacactccttggactaggcgtgtcccggcgtcggacacatgtcgtgtccgacaccgacacttgtaattacattgaattatgtgattttttttcaaa 5040746  T
Q  820 ttattagctgtgtcggc 836  Q
    ||||||||||| |||||    
T  5040745 ttattagctgtatcggc 5040729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 774 - 839
Target Start/End: Complemental strand, 15657923 - 15657858
Alignment:
Q  774 cgacaccgacacttgtaattacactgaattatgtgatttttacaaattattagctgtgtcggcgtg 839  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||| || |||||||||    
T  15657923 cgacaccgacatttgtaattacactgaattatgtgatttttacaaattattagttgagtcggcgtg 15657858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 768 - 839
Target Start/End: Original strand, 19536391 - 19536463
Alignment:
Q  768 cgtgcccgacaccgacacttgtaattacactgaattatgtga-tttttacaaattattagctgtgtcggcgtg 839  Q
    |||| ||||||||||||||||||||||||||||||||||||| ||||| ||||||||||| ||||||||||||    
T  19536391 cgtgtccgacaccgacacttgtaattacactgaattatgtgatttttttcaaattattagttgtgtcggcgtg 19536463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 721 - 839
Target Start/End: Complemental strand, 21624374 - 21624260
Alignment:
Q  721 gcacggtcacttctcggattaggtgtgtcccggtgacgtacacgtgtcgtgcccgacaccgacacttgtaattacactgaattatg-tgatttttacaaa 819  Q
    |||||| |||| || ||||||||||||||||| || || |||||||||     ||||||||||||||||||||||||||||||||| |  |||||  |||    
T  21624374 gcacggacactccttggattaggtgtgtcccgctgtcggacacgtgtc-----cgacaccgacacttgtaattacactgaattatgctatttttttaaaa 21624280  T
Q  820 ttattagctgtgtcggcgtg 839  Q
    ||||||||||||||||||||    
T  21624279 ttattagctgtgtcggcgtg 21624260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 737 - 839
Target Start/End: Complemental strand, 6940351 - 6940249
Alignment:
Q  737 gattaggtgtgtcccggtgacgtacacgtgtcgtgcccgacaccgacacttgtaattacactgaattatgtgatttttacaaattattagctgtgtcggc 836  Q
    |||||||||||||  ||||  | |||||||||||| | || ||||||||||||||||||||| |||||||| | ||||  ||||||||||||||||||||    
T  6940351 gattaggtgtgtcttggtgttggacacgtgtcgtgtcggataccgacacttgtaattacacttaattatgtaactttttaaaattattagctgtgtcggc 6940252  T
Q  837 gtg 839  Q
    |||    
T  6940251 gtg 6940249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 781 - 839
Target Start/End: Original strand, 21374706 - 21374764
Alignment:
Q  781 gacacttgtaattacactgaattatgtgatttttacaaattattagctgtgtcggcgtg 839  Q
    ||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||    
T  21374706 gacacttgtaattacactgaattatgtaattttttcaaattattagctgtgtcggcgtg 21374764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 774 - 839
Target Start/End: Original strand, 20539674 - 20539739
Alignment:
Q  774 cgacaccgacacttgtaattacactgaattatgtgatttttacaaattattagctgtgtcggcgtg 839  Q
    ||||||||||||||||||||||||| |||||| |||||||| ||||||||||||||||||| ||||    
T  20539674 cgacaccgacacttgtaattacactaaattatatgattttttcaaattattagctgtgtcgacgtg 20539739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 774 - 835
Target Start/End: Original strand, 30717530 - 30717591
Alignment:
Q  774 cgacaccgacacttgtaattacactgaattatgtgatttttacaaattattagctgtgtcgg 835  Q
    ||||| ||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||    
T  30717530 cgacatcgacacttgtaattacactgaattatgtgattttttcaaattattagctttgtcgg 30717591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 711 - 836
Target Start/End: Original strand, 37411181 - 37411306
Alignment:
Q  711 aacctatgaagcacggtcacttctcggattaggtgtgtcccggtgacgtacacgtgtcgtgcccgacaccgacacttgtaattacactgaattatgtgat 810  Q
    |||||| ||||||| | |||| |||||| |||| ||||||| ||| || ||||| ||||||  ||||| |||||| | |||| |||||||||||||||||    
T  37411181 aacctacgaagcacaggcactcctcggactaggcgtgtcccagtgtcggacacgcgtcgtgttcgacatcgacacatataatcacactgaattatgtgat 37411280  T
Q  811 ttttacaaattattagctgtgtcggc 836  Q
    |||  |||||||||||| ||||||||    
T  37411281 tttctcaaattattagcggtgtcggc 37411306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 711 - 839
Target Start/End: Complemental strand, 37419876 - 37419737
Alignment:
Q  711 aacctatgaagcacggtcacttctcggattaggtgtgtcccggtgacgtacacgtgtcgtgcccgacaccga-----------cacttgtaattacactg 799  Q
    |||||||||||||||| |||| ||||||||||| ||||||||||| || |||||  ||||| ||||||||||           |||||||||||||||||    
T  37419876 aacctatgaagcacggacactcctcggattaggcgtgtcccggtgtcggacacgcatcgtgtccgacaccgacacgacaccggcacttgtaattacactg 37419777  T
Q  800 aattatgtgatttttacaaattattagctgtgtcggcgtg 839  Q
    |||| |||||||||| ||||||||| ||  ||||||||||    
T  37419776 aattttgtgattttttcaaattatttgccatgtcggcgtg 37419737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 775 - 839
Target Start/End: Original strand, 11223864 - 11223928
Alignment:
Q  775 gacaccgacacttgtaattacactgaattatgtgatttttacaaattattagctgtgtcggcgtg 839  Q
    ||||||||||||||||||||||||||||||||| |||||| |||| ||||||||||||| |||||    
T  11223864 gacaccgacacttgtaattacactgaattatgttattttttcaaaatattagctgtgtcagcgtg 11223928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 728 - 839
Target Start/End: Original strand, 29176447 - 29176558
Alignment:
Q  728 cacttctcggattaggtgtgtcccggtgacgtacacgtgtcgtgcccgacaccgacacttgtaattacactgaattatgtgatttttacaaattattagc 827  Q
    ||||||| |||||||||||||| | ||| || ||| ||| |||| || ||||| |||||| |||||||||||||||||||||  ||| |||||||||| |    
T  29176447 cacttcttggattaggtgtgtctcagtgtcggacatgtgccgtgtccaacaccaacacttataattacactgaattatgtgaccttttcaaattattaac 29176546  T
Q  828 tgtgtcggcgtg 839  Q
    |||||| |||||    
T  29176547 tgtgtctgcgtg 29176558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 736 - 839
Target Start/End: Complemental strand, 12224320 - 12224215
Alignment:
Q  736 ggattaggtgtgtcccggtgacgtacacgtgtcgtgcccgacaccgacacttgtaattacactgaattatgtga--tttttacaaattattagctgtgtc 833  Q
    |||||||| ||||||| ||| || |||||| ||||| |||||||||||||||||||||||| || |||||| ||  ||||| ||||||||||||| |||     
T  12224320 ggattaggcgtgtcccagtgtcggacacgtatcgtgtccgacaccgacacttgtaattacattggattatgggattttttttcaaattattagctatgtt 12224221  T
Q  834 ggcgtg 839  Q
    ||||||    
T  12224220 ggcgtg 12224215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 774 - 839
Target Start/End: Original strand, 12668423 - 12668488
Alignment:
Q  774 cgacaccgacacttgtaattacactgaattatgtgatttttacaaattattagctgtgtcggcgtg 839  Q
    |||||||||||||| ||||||||||||||||||| |||||| ||||||||||| | ||||||||||    
T  12668423 cgacaccgacacttataattacactgaattatgtcattttttcaaattattagttatgtcggcgtg 12668488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 774 - 839
Target Start/End: Complemental strand, 18422022 - 18421957
Alignment:
Q  774 cgacaccgacacttgtaattacactgaattatgtgatttttacaaattattagctgtgtcggcgtg 839  Q
    ||||||||||||||||||||||||||||||||||||| |||  |||||||||  ||||||||||||    
T  18422022 cgacaccgacacttgtaattacactgaattatgtgatatttttaaattattaattgtgtcggcgtg 18421957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 774 - 839
Target Start/End: Complemental strand, 30335476 - 30335411
Alignment:
Q  774 cgacaccgacacttgtaattacactgaattatgtgatttttacaaattattagctgtgtcggcgtg 839  Q
    ||||||||||| ||||||||||||| |||||||| |||||| ||||||||||| ||||||||||||    
T  30335476 cgacaccgacatttgtaattacactaaattatgtcattttttcaaattattagttgtgtcggcgtg 30335411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 774 - 834
Target Start/End: Complemental strand, 974806 - 974746
Alignment:
Q  774 cgacaccgacacttgtaattacactgaattatgtgatttttacaaattattagctgtgtcg 834  Q
    ||||||||||||||||||||||||||||| ||||||| ||| ||||||||||| |||||||    
T  974806 cgacaccgacacttgtaattacactgaataatgtgatcttttcaaattattagttgtgtcg 974746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 736 - 835
Target Start/End: Complemental strand, 31808174 - 31808075
Alignment:
Q  736 ggattaggtgtgtcccggtgacgtacacgtgtcgtgcccgacaccgacacttgtaattacactgaattatgtgatttttacaaattattagctgtgtcgg 835  Q
    ||||||||||||||| |||| || ||| ||||||||  | |||| ||||| | |||||||||||||||||||||||||   ||||||||||| |||||||    
T  31808174 ggattaggtgtgtccaggtgtcgaacatgtgtcgtgttcaacactgacacatataattacactgaattatgtgattttgttaaattattagcggtgtcgg 31808075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 736 - 826
Target Start/End: Complemental strand, 5367289 - 5367199
Alignment:
Q  736 ggattaggtgtgtcccggtgacgtacacgtgtcgtgcccgacaccgacacttgtaattacactgaattatgtgatttttacaaattattag 826  Q
    |||||||| ||||||||| | || | | |||||||| ||||||||||||| | ||||||||||||||||||||||||   |||||||||||    
T  5367289 ggattaggcgtgtcccggagtcggatatgtgtcgtgtccgacaccgacacatataattacactgaattatgtgatttcctcaaattattag 5367199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 775 - 836
Target Start/End: Original strand, 14996224 - 14996286
Alignment:
Q  775 gacaccgacacttgtaattacactgaattatgtga-tttttacaaattattagctgtgtcggc 836  Q
    |||||||||||||||||||||||| |||||| ||| ||||| |||||||||||||||||||||    
T  14996224 gacaccgacacttgtaattacactaaattatatgatttttttcaaattattagctgtgtcggc 14996286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 713 - 839
Target Start/End: Original strand, 20242666 - 20242792
Alignment:
Q  713 cctatgaagcacggtcacttctcggattaggtgtgtcccggtgacgtacacgtgtcgtgcccgacaccgacacttgtaattacactgaattatgtgattt 812  Q
    |||||||||||| | ||||  |||||| ||| ||||||  ||| |  |||||||| ||| ||||||||||||| | ||||||||||||||||||||||||    
T  20242666 cctatgaagcacagacactcttcggataaggcgtgtcctcgtgtcagacacgtgttgtgtccgacaccgacacatataattacactgaattatgtgattt 20242765  T
Q  813 ttacaaattattagctgtgtcggcgtg 839  Q
    |   |||  ||||| ||||||||||||    
T  20242766 tctaaaaaaattagttgtgtcggcgtg 20242792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 717 - 835
Target Start/End: Complemental strand, 21091839 - 21091721
Alignment:
Q  717 tgaagcacggtcacttctcggattaggtgtgtcccggtgacgtacacgtgtcgtgcccgacaccgacacttgtaattacactgaattatgtgatttttac 816  Q
    |||||||||| ||||  ||||| |||||||||||||||| |  ||| ||| | || | ||||| ||||||||||||||||||||| ||||| |||||       
T  21091839 tgaagcacggacactcttcggaataggtgtgtcccggtgtccgacaggtggcttgtctgacactgacacttgtaattacactgaagtatgttattttctt 21091740  T
Q  817 aaattattagctgtgtcgg 835  Q
    ||||||||||| |||||||    
T  21091739 aaattattagcggtgtcgg 21091721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 714 - 839
Target Start/End: Complemental strand, 26769641 - 26769505
Alignment:
Q  714 ctatgaagcacggtcacttctcggattaggtgtgtcccggtgacgtacacgtgtcgtgccc-----------gacaccgacacttgtaattacactgaat 802  Q
    ||||||||||||| |||| ||||||||||| ||||||| ||| || |||||||||||| ||           |||||||||||||||||||||||   ||    
T  26769641 ctatgaagcacggacactcctcggattaggcgtgtcccagtgtcggacacgtgtcgtgtccgataccgacatgacaccgacacttgtaattacaccagat 26769542  T
Q  803 tatgtgatttttacaaattattagctgtgtcggcgtg 839  Q
     ||||||| ||| ||||||||||| ||||||||||||    
T  26769541 aatgtgatattttcaaattattagttgtgtcggcgtg 26769505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 782 - 839
Target Start/End: Complemental strand, 24894440 - 24894383
Alignment:
Q  782 acacttgtaattacactgaattatgtgatttttacaaattattagctgtgtcggcgtg 839  Q
    |||||| ||||| ||||||||||||||||||||  |||||||||||||||||||||||    
T  24894440 acacttttaattgcactgaattatgtgatttttttaaattattagctgtgtcggcgtg 24894383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 789 - 838
Target Start/End: Complemental strand, 28677953 - 28677904
Alignment:
Q  789 taattacactgaattatgtgatttttacaaattattagctgtgtcggcgt 838  Q
    |||||||||||||||||||||||||| |||||||||||| ||||||||||    
T  28677953 taattacactgaattatgtgattttttcaaattattagcggtgtcggcgt 28677904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 774 - 839
Target Start/End: Complemental strand, 33153483 - 33153418
Alignment:
Q  774 cgacaccgacacttgtaattacactgaattatgtgatttttacaaattattagctgtgtcggcgtg 839  Q
    |||||| ||||||||||||||||||||||||||||||||||  |||| ||||| ||| ||||||||    
T  33153483 cgacacggacacttgtaattacactgaattatgtgatttttttaaatcattagatgtttcggcgtg 33153418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 774 - 839
Target Start/End: Original strand, 36756344 - 36756409
Alignment:
Q  774 cgacaccgacacttgtaattacactgaattatgtgatttttacaaattattagctgtgtcggcgtg 839  Q
    |||||||||||||| ||||||||||||||||||| |||| | ||||||||||| ||||||| ||||    
T  36756344 cgacaccgacacttataattacactgaattatgttatttcttcaaattattagttgtgtcgacgtg 36756409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 768 - 836
Target Start/End: Complemental strand, 20473387 - 20473319
Alignment:
Q  768 cgtgcccgacaccgacacttgtaattacactgaattatgtgatttttacaaattattagctgtgtcggc 836  Q
    |||| |||||| |||||||||||||||||||||||||| ||| ||||  |||||||||| |||||||||    
T  20473387 cgtgtccgacatcgacacttgtaattacactgaattatatgagttttttaaattattagttgtgtcggc 20473319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 789 - 839
Target Start/End: Complemental strand, 21616806 - 21616756
Alignment:
Q  789 taattacactgaattatgtgatttttacaaattattagctgtgtcggcgtg 839  Q
    |||||||||||||||||||||||||  |||||||||||| |||||||||||    
T  21616806 taattacactgaattatgtgattttctcaaattattagcggtgtcggcgtg 21616756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 789 - 839
Target Start/End: Original strand, 21782833 - 21782883
Alignment:
Q  789 taattacactgaattatgtgatttttacaaattattagctgtgtcggcgtg 839  Q
    |||||||||||||||||||||||||  |||||||||||| |||||||||||    
T  21782833 taattacactgaattatgtgattttctcaaattattagcagtgtcggcgtg 21782883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 774 - 839
Target Start/End: Original strand, 23058442 - 23058508
Alignment:
Q  774 cgacaccgacacttgtaattacactgaattatgtga-tttttacaaattattagctgtgtcggcgtg 839  Q
    |||||||||||||||||||||||||| ||||||||| ||||| ||||||||||  ||||| ||||||    
T  23058442 cgacaccgacacttgtaattacactggattatgtgatttttttcaaattattaattgtgtgggcgtg 23058508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 780 - 833
Target Start/End: Original strand, 12940941 - 12940994
Alignment:
Q  780 cgacacttgtaattacactgaattatgtgatttttacaaattattagctgtgtc 833  Q
    ||||| |||||||||||||||||||| |||||||| ||||||||||| ||||||    
T  12940941 cgacatttgtaattacactgaattatatgattttttcaaattattagttgtgtc 12940994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 768 - 833
Target Start/End: Original strand, 18255974 - 18256039
Alignment:
Q  768 cgtgcccgacaccgacacttgtaattacactgaattatgtgatttttacaaattattagctgtgtc 833  Q
    |||| ||||||||||||||| |||||||| | |||||||||||||||  ||||||||| |||||||    
T  18255974 cgtgtccgacaccgacacttctaattacattaaattatgtgatttttttaaattattatctgtgtc 18256039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 781 - 834
Target Start/End: Complemental strand, 39323316 - 39323263
Alignment:
Q  781 gacacttgtaattacactgaattatgtgatttttacaaattattagctgtgtcg 834  Q
    ||||||||||||||||||||||||||| |||||  |||||||||||| ||||||    
T  39323316 gacacttgtaattacactgaattatgtaattttgtcaaattattagcggtgtcg 39323263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 775 - 835
Target Start/End: Original strand, 42832277 - 42832337
Alignment:
Q  775 gacaccgacacttgtaattacactgaattatgtgatttttacaaattattagctgtgtcgg 835  Q
    ||||||||||||| ||||||||||||| ||||| |||||  |||||||||||| |||||||    
T  42832277 gacaccgacacttataattacactgaaatatgtaattttctcaaattattagcggtgtcgg 42832337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 776 - 839
Target Start/End: Original strand, 18420436 - 18420499
Alignment:
Q  776 acaccgacacttgtaattacactgaattatgtgatttttacaaattattagctgtgtcggcgtg 839  Q
    |||||||||||| ||||| || ||||||||||||||||  |||||||||||| |||| ||||||    
T  18420436 acaccgacacttataattgcattgaattatgtgattttctcaaattattagcagtgttggcgtg 18420499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 768 - 827
Target Start/End: Original strand, 34691799 - 34691858
Alignment:
Q  768 cgtgcccgacaccgacacttgtaattacactgaattatgtgatttttacaaattattagc 827  Q
    |||| ||||||||||||| | ||||||||||||||||| |||||||  ||||||||||||    
T  34691799 cgtgtccgacaccgacacatataattacactgaattatatgattttatcaaattattagc 34691858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 768 - 827
Target Start/End: Original strand, 34714211 - 34714270
Alignment:
Q  768 cgtgcccgacaccgacacttgtaattacactgaattatgtgatttttacaaattattagc 827  Q
    |||| ||||||||||||| | ||||||||||||||||| |||||||  ||||||||||||    
T  34714211 cgtgtccgacaccgacacatataattacactgaattatatgattttatcaaattattagc 34714270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 715 - 833
Target Start/End: Complemental strand, 44860449 - 44860320
Alignment:
Q  715 tatgaagcacggtcacttctcggattaggtgtgtcccggtgacgtacacgtgtcgtg-----------cccgacaccgacacttgtaattacactgaatt 803  Q
    |||||||||||| |||| |||| ||||||||||||||| || || |||| |||||||           | |||||||||||| | |||||||||||||||    
T  44860449 tatgaagcacggacactcctcgaattaggtgtgtcccgatgtcggacacatgtcgtgtccaacaccaacacgacaccgacacatataattacactgaatt 44860350  T
Q  804 atgtgatttttacaaattattagctgtgtc 833  Q
    ||| ||||||  |||||||||||| |||||    
T  44860349 atgcgattttctcaaattattagcggtgtc 44860320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 777 - 835
Target Start/End: Complemental strand, 23718082 - 23718024
Alignment:
Q  777 caccgacacttgtaattacactgaattatgtgatttttacaaattattagctgtgtcgg 835  Q
    ||||||||| | ||||||||||||||||||||| |||  |||||||||||| |||||||    
T  23718082 caccgacacatataattacactgaattatgtgactttctcaaattattagcggtgtcgg 23718024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 777 - 835
Target Start/End: Complemental strand, 24105754 - 24105696
Alignment:
Q  777 caccgacacttgtaattacactgaattatgtgatttttacaaattattagctgtgtcgg 835  Q
    ||||||||| | ||||||||||||||||||||| |||  |||||||||||| |||||||    
T  24105754 caccgacacatataattacactgaattatgtgactttctcaaattattagcggtgtcgg 24105696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 773 - 811
Target Start/End: Complemental strand, 44635558 - 44635520
Alignment:
Q  773 ccgacaccgacacttgtaattacactgaattatgtgatt 811  Q
    |||||||||||||||||||||||||||||||| ||||||    
T  44635558 ccgacaccgacacttgtaattacactgaattacgtgatt 44635520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 774 - 827
Target Start/End: Original strand, 4882696 - 4882749
Alignment:
Q  774 cgacaccgacacttgtaattacactgaattatgtgatttttacaaattattagc 827  Q
    ||||| |||||||||||||||||||||||||| | |||||| ||||| ||||||    
T  4882696 cgacatcgacacttgtaattacactgaattatatcattttttcaaataattagc 4882749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 775 - 836
Target Start/End: Complemental strand, 18276579 - 18276518
Alignment:
Q  775 gacaccgacacttgtaattacactgaattatgtgatttttacaaattattagctgtgtcggc 836  Q
    |||||||||||   |||||||||||||||| ||||||||  |||||||||||| ||||||||    
T  18276579 gacaccgacacacataattacactgaattaagtgattttctcaaattattagcggtgtcggc 18276518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 714 - 839
Target Start/End: Complemental strand, 24009414 - 24009290
Alignment:
Q  714 ctatgaagcacggtcacttctcggattaggtgtgtcccggtgacgtacacgtgtcgtgcccgacaccgacacttgtaattacactgaattatgtgatttt 813  Q
    ||||||||||||| |||| || |||| ||| ||||||| ||| |  |||||||||||| ||||||||||||| |  | |||||||| ||| |||||||||    
T  24009414 ctatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacacat-aatttacactgcattttgtgatttt 24009316  T
Q  814 tacaaattattagctgtgtcggcgtg 839  Q
       |||  ||||||||||||| ||||    
T  24009315 ctaaaaaaattagctgtgtcgccgtg 24009290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 779 - 836
Target Start/End: Original strand, 34221502 - 34221559
Alignment:
Q  779 ccgacacttgtaattacactgaattatgtgatttttacaaattattagctgtgtcggc 836  Q
    ||||||||||||||| ||  |||||||||  ||||| |||||||||||||||||||||    
T  34221502 ccgacacttgtaattgcatagaattatgtatttttttcaaattattagctgtgtcggc 34221559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 760 - 813
Target Start/End: Original strand, 43585991 - 43586044
Alignment:
Q  760 acacgtgtcgtgcccgacaccgacacttgtaattacactgaattatgtgatttt 813  Q
    |||||| ||||| ||||||||||||||||| |||||| |||||||||| |||||    
T  43585991 acacgtatcgtgtccgacaccgacacttgtgattacattgaattatgtcatttt 43586044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 713 - 826
Target Start/End: Complemental strand, 18622722 - 18622613
Alignment:
Q  713 cctatgaagcacggtcacttctcggattaggtgtgtcccggtgacgtacacgtgtcgtgcccgacaccgacacttgtaattacactgaattatgtgattt 812  Q
    |||||||||||||| |||| ||||||||| |||||||||||||  | |||  ||     | ||||||| |||| | ||||||||||||||||||||||||    
T  18622722 cctatgaagcacggacactcctcggattaagtgtgtcccggtgtaggacatatg----acacgacaccaacacgtataattacactgaattatgtgattt 18622627  T
Q  813 ttacaaattattag 826  Q
    |   ||||||||||    
T  18622626 tattaaattattag 18622613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 764 - 839
Target Start/End: Complemental strand, 31284118 - 31284042
Alignment:
Q  764 gtgtcgtgcccgacaccgacacttg-taattacactgaattatgtgatttttacaaattattagctgtgtcggcgtg 839  Q
    |||||||| || |||||||||| |  |||||||| || |||||||||||||  |||||||||||| |||||||||||    
T  31284118 gtgtcgtgtccaacaccgacacataataattacaatggattatgtgattttctcaaattattagcagtgtcggcgtg 31284042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 775 - 839
Target Start/End: Original strand, 34337182 - 34337241
Alignment:
Q  775 gacaccgacacttgtaattacactgaattatgtgatttttacaaattattagctgtgtcggcgtg 839  Q
    ||||||||||||||||||||     ||||||||||||||| |||||||| | |||||||||||||    
T  34337182 gacaccgacacttgtaatta-----aattatgtgattttttcaaattatcaactgtgtcggcgtg 34337241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 709 - 785
Target Start/End: Complemental strand, 35057003 - 35056927
Alignment:
Q  709 ataacctatgaagcacggtcacttctcggattaggtgtgtcccggtgacgtacacgtgtcgtgcccgacaccgacac 785  Q
    |||| ||||||||||||| |||| ||| ||||||| ||||  | ||| || |||||||||||| |||||||||||||    
T  35057003 ataagctatgaagcacggacactcctcagattaggcgtgtttccgtgtcggacacgtgtcgtgtccgacaccgacac 35056927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 780 - 839
Target Start/End: Complemental strand, 28524479 - 28524420
Alignment:
Q  780 cgacacttgtaattacactgaattatgtgatttttacaaattattagctgtgtcggcgtg 839  Q
    |||||| | ||||||||||||||||||||||||  ||||| | |||||||| ||||||||    
T  28524479 cgacacatataattacactgaattatgtgatttgcacaaaattttagctgtatcggcgtg 28524420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 768 - 839
Target Start/End: Complemental strand, 31018655 - 31018584
Alignment:
Q  768 cgtgcccgacaccgacacttgtaattacactgaattatgtgatttttacaaattattagctgtgtcggcgtg 839  Q
    |||| ||||||||||||| | |||||||||| ||| ||||||||||   ||||||||||| |||| ||||||    
T  31018655 cgtgtccgacaccgacacctataattacactaaatcatgtgattttctgaaattattagcggtgttggcgtg 31018584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 774 - 813
Target Start/End: Complemental strand, 33884110 - 33884071
Alignment:
Q  774 cgacaccgacacttgtaattacactgaattatgtgatttt 813  Q
    ||||||||||||||||||||||||||||| |||| |||||    
T  33884110 cgacaccgacacttgtaattacactgaatcatgtcatttt 33884071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 789 - 836
Target Start/End: Original strand, 36409642 - 36409689
Alignment:
Q  789 taattacactgaattatgtgatttttacaaattattagctgtgtcggc 836  Q
    |||||||||| ||||||||||||||| |||||||| ||| ||||||||    
T  36409642 taattacactaaattatgtgattttttcaaattatcagcggtgtcggc 36409689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 767 - 825
Target Start/End: Complemental strand, 5473394 - 5473336
Alignment:
Q  767 tcgtgcccgacaccgacacttgtaattacactgaattatgtgatttttacaaattatta 825  Q
    ||||| ||||||||||||| |   ||||||| |||||||||||||||| ||||||||||    
T  5473394 tcgtgtccgacaccgacacataatattacaccgaattatgtgattttttcaaattatta 5473336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 780 - 838
Target Start/End: Original strand, 10535765 - 10535823
Alignment:
Q  780 cgacacttgtaattacactgaattatgtgatttttacaaattattagctgtgtcggcgt 838  Q
    |||||||| | ||||||||||||||||| |||||  |||||||||| | ||||||||||    
T  10535765 cgacacttatgattacactgaattatgtcattttctcaaattattatcggtgtcggcgt 10535823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 789 - 839
Target Start/End: Original strand, 16069269 - 16069319
Alignment:
Q  789 taattacactgaattatgtgatttttacaaattattagctgtgtcggcgtg 839  Q
    ||||||||||||||||| ||||||||  ||||||||| | |||||||||||    
T  16069269 taattacactgaattatatgatttttttaaattattaacggtgtcggcgtg 16069319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #66
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 790 - 839
Target Start/End: Complemental strand, 27460070 - 27460020
Alignment:
Q  790 aattacactgaattatgtgattttta-caaattattagctgtgtcggcgtg 839  Q
    ||||| |||||||||||| ||||||  ||||||||||||||||||||||||    
T  27460070 aattatactgaattatgtcatttttttcaaattattagctgtgtcggcgtg 27460020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #67
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 713 - 807
Target Start/End: Original strand, 34993921 - 34994015
Alignment:
Q  713 cctatgaagcacggtcacttctcggattaggtgtgtcccggtgacgtacacgtgtcgtgcccgacaccgacacttgtaattacactgaattatgt 807  Q
    |||||||||||||  |||| || | |||||| ||||||| ||| || |||| |||||||  |||||| ||||| | |||||||| ||||||||||    
T  34993921 cctatgaagcacgaacactccttgaattaggcgtgtcccagtgtcggacacatgtcgtgttcgacactgacacatataattacattgaattatgt 34994015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #68
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 774 - 831
Target Start/End: Complemental strand, 38442366 - 38442309
Alignment:
Q  774 cgacaccgacacttgtaattacactgaattatgtgatttttacaaattattagctgtg 831  Q
    |||||||||||||| |||||| | |||||||||||||||||  |||| ||||| ||||    
T  38442366 cgacaccgacacttataattatattgaattatgtgatttttttaaatcattagttgtg 38442309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #69
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 760 - 825
Target Start/End: Original strand, 40361740 - 40361805
Alignment:
Q  760 acacgtgtcgtgcccgacaccgacacttgtaattacactgaattatgtgatttttacaaattatta 825  Q
    |||||||||||| | |||||| |||  | |||||||||| |||||||| |||||| ||||||||||    
T  40361740 acacgtgtcgtgtctgacaccaacagatataattacactaaattatgtaattttttcaaattatta 40361805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #70
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 714 - 779
Target Start/End: Original strand, 42511322 - 42511387
Alignment:
Q  714 ctatgaagcacggtcacttctcggattaggtgtgtcccggtgacgtacacgtgtcgtgcccgacac 779  Q
    ||||||||||||| |||| ||||||||||  ||||||| ||| || |||||||| ||| |||||||    
T  42511322 ctatgaagcacggacactcctcggattagccgtgtccctgtgtcggacacgtgttgtgtccgacac 42511387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 78; Significance: 7e-36; HSPs: 103)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 78; E-Value: 7e-36
Query Start/End: Original strand, 714 - 839
Target Start/End: Original strand, 22515827 - 22515952
Alignment:
Q  714 ctatgaagcacggtcacttctcggattaggtgtgtcccggtgacgtacacgtgtcgtgcccgacaccgacacttgtaattacactgaattatgtgatttt 813  Q
    ||||||||||||| |||| ||||||||||| ||||| ||||| || | | |||||||| |||||||||||||||||||||||||| ||||||||||||||    
T  22515827 ctatgaagcacggacactcctcggattaggcgtgtctcggtgtcggatatgtgtcgtgtccgacaccgacacttgtaattacactaaattatgtgatttt 22515926  T
Q  814 tacaaattattagctgtgtcggcgtg 839  Q
    | |||||||||||||||||| |||||    
T  22515927 ttcaaattattagctgtgtctgcgtg 22515952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 78; E-Value: 7e-36
Query Start/End: Original strand, 714 - 839
Target Start/End: Original strand, 46348323 - 46348448
Alignment:
Q  714 ctatgaagcacggtcacttctcggattaggtgtgtcccggtgacgtacacgtgtcgtgcccgacaccgacacttgtaattacactgaattatgtgatttt 813  Q
    ||||||||||||| |||  ||||||| ||| ||||| ||||| || |||||||||||| |||||||||||||||||||||||||| |||||| |||||||    
T  46348323 ctatgaagcacggacacacctcggatcaggcgtgtctcggtgtcggacacgtgtcgtgtccgacaccgacacttgtaattacactaaattatatgatttt 46348422  T
Q  814 tacaaattattagctgtgtcggcgtg 839  Q
    | ||||||||||||||||||||||||    
T  46348423 ttcaaattattagctgtgtcggcgtg 46348448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 713 - 839
Target Start/End: Complemental strand, 37598951 - 37598826
Alignment:
Q  713 cctatgaagcacggtcacttctcggattaggtgtgtcccggtgacgtacacgtgtcgtgcccgacaccgacacttgtaattacactgaattatgtgattt 812  Q
    |||||||||||||| |||| ||||||||||| |||||||  || || |||||||||||| ||||||||||||||| ||||||||||||||| ||||||||    
T  37598951 cctatgaagcacggacactcctcggattaggcgtgtcccattgtcggacacgtgtcgtgtccgacaccgacacttataattacactgaatt-tgtgattt 37598853  T
Q  813 ttacaaattattagctgtgtcggcgtg 839  Q
    || ||||||||||| ||||||||||||    
T  37598852 tttcaaattattagttgtgtcggcgtg 37598826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 716 - 839
Target Start/End: Original strand, 42359391 - 42359514
Alignment:
Q  716 atgaagcacggtcacttctcggattaggtgtgtcccggtgacgtacacgtgtcgtgcccgacaccgacacttgtaattacactgaattatgtgattttta 815  Q
    ||||||||||| |||| ||||||||||| ||||||||||| || ||||  ||| || ||||||||||||||||||||||||||||||| ||||||||||     
T  42359391 atgaagcacggacactcctcggattaggcgtgtcccggtgtcggacacacgtcttgtccgacaccgacacttgtaattacactgaattttgtgatttttt 42359490  T
Q  816 caaattattagctgtgtcggcgtg 839  Q
    ||||||||||| |||||| |||||    
T  42359491 caaattattagatgtgtcagcgtg 42359514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 713 - 839
Target Start/End: Complemental strand, 1815377 - 1815251
Alignment:
Q  713 cctatgaagcacggtcacttctcggattaggtgtgtcccggtgacgtacacgtgtcgtgcccgacaccgacacttgtaattacactgaattatgtgattt 812  Q
    |||||||| |||||||||| ||| ||||||| ||||||||||| || ||| |||||||| | ||||||||||||||||||||||||||||||||||||||    
T  1815377 cctatgaatcacggtcactcctcagattaggcgtgtcccggtgtcggacatgtgtcgtgtcggacaccgacacttgtaattacactgaattatgtgattt 1815278  T
Q  813 ttacaaattattagctgtgtcggcgtg 839  Q
    ||  |||| ||||  ||||||||||||    
T  1815277 tttaaaataattatttgtgtcggcgtg 1815251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 714 - 839
Target Start/End: Original strand, 38078601 - 38078726
Alignment:
Q  714 ctatgaagcacggtcacttctcggattaggtgtgtcccggtgacgtacacgtgtcgtgcccgacaccgacacttgtaattacactgaattatgtgatttt 813  Q
    ||||||||||||   ||| ||||||||||| |||||| ||||  | ||| |||||||| |||||||||||||||||||||||| ||||||||||||||||    
T  38078601 ctatgaagcacgaatactcctcggattaggcgtgtcctggtgttgaacatgtgtcgtgtccgacaccgacacttgtaattacattgaattatgtgatttt 38078700  T
Q  814 tacaaattattagctgtgtcggcgtg 839  Q
    | ||||||||||||||||||| ||||    
T  38078701 ttcaaattattagctgtgtcgacgtg 38078726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 716 - 839
Target Start/End: Original strand, 1486646 - 1486774
Alignment:
Q  716 atgaagcacggtcacttctcggattaggtgtgtcccggtgacgtacacgtgtcgtg-----cccgacaccgacacttgtaattacactgaattatgtgat 810  Q
    ||||||||| | |||| ||||||||||| ||||||||||| || ||||||||||||     | |||||||||||||| ||||||||||||||||||||||    
T  1486646 atgaagcacagacactcctcggattaggcgtgtcccggtgtcggacacgtgtcgtgtccgacacgacaccgacacttataattacactgaattatgtgat 1486745  T
Q  811 ttttacaaattattagctgtgtcggcgtg 839  Q
    |||| |||||||||||||||||| |||||    
T  1486746 tttttcaaattattagctgtgtcagcgtg 1486774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 715 - 835
Target Start/End: Original strand, 40258874 - 40258994
Alignment:
Q  715 tatgaagcacggtcacttctcggattaggtgtgtcccggtgacgtacacgtgtcgtgcccgacaccgacacttgtaattacactgaattatgtgattttt 814  Q
    ||||||||| || |||| ||||||||||| |||||| |||| || ||| |||||||| | ||||||||||||||||||||||||||||||||||||||||    
T  40258874 tatgaagcatggacactcctcggattaggcgtgtcctggtgtcggacaggtgtcgtgtctgacaccgacacttgtaattacactgaattatgtgattttt 40258973  T
Q  815 acaaattattagctgtgtcgg 835  Q
     ||||||||||  ||||||||    
T  40258974 tcaaattattaattgtgtcgg 40258994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 709 - 836
Target Start/End: Complemental strand, 51410149 - 51410021
Alignment:
Q  709 ataacctatgaagcacggtcacttctcggattaggtgtgtcccggtgacgtacacgtgtcgtgcccgacaccgacacttgtaattacactgaattatgtg 808  Q
    |||||||||||||||||   ||| || |||||||| ||||| ||||| || | |||||||||| ||||||||||||||||||||||||||||||||||||    
T  51410149 ataacctatgaagcacgaatactccttggattaggcgtgtctcggtgtcggatacgtgtcgtgtccgacaccgacacttgtaattacactgaattatgtg 51410050  T
Q  809 at-ttttacaaattattagctgtgtcggc 836  Q
    || |||| ||||||||||| |||||||||    
T  51410049 atttttttcaaattattagatgtgtcggc 51410021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 714 - 824
Target Start/End: Complemental strand, 18337448 - 18337338
Alignment:
Q  714 ctatgaagcacggtcacttctcggattaggtgtgtcccggtgacgtacacgtgtcgtgcccgacaccgacacttgtaattacactgaattatgtgatttt 813  Q
    ||||||||||||| |||| ||||||| |||  |||||| ||| || |||||||| ||| |||||||||||||||||||||||||||||||||||||||||    
T  18337448 ctatgaagcacggacactcctcggatcaggcatgtcccagtgtcggacacgtgttgtgtccgacaccgacacttgtaattacactgaattatgtgatttt 18337349  T
Q  814 tacaaattatt 824  Q
    | |||||||||    
T  18337348 ttcaaattatt 18337338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 728 - 833
Target Start/End: Original strand, 18190062 - 18190167
Alignment:
Q  728 cacttctcggattaggtgtgtcccggtgacgtacacgtgtcgtgcccgacaccgacacttgtaattacactgaattatgtgatttttacaaattattagc 827  Q
    |||| ||||||||||||||||||||||| || |||||||| ||| | |||| |||||||||||||||||||||||||||| |||||| |||||||||||     
T  18190062 cactcctcggattaggtgtgtcccggtgtcggacacgtgttgtgtctgacatcgacacttgtaattacactgaattatgtaattttttcaaattattagg 18190161  T
Q  828 tgtgtc 833  Q
    ||||||    
T  18190162 tgtgtc 18190167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 712 - 838
Target Start/End: Original strand, 5898204 - 5898330
Alignment:
Q  712 acctatgaagcacggtcacttctcggattaggtgtgtcccggtgacgtacacgtgtcgtgcccgacaccgacacttgtaattacactgaattatgtgatt 811  Q
    |||||| |||||||| |||| ||||||||||  |||||||||||  | |||||||||||| | ||||||||| | | |||||||||||||||||||||||    
T  5898204 acctataaagcacggacactcctcggattagacgtgtcccggtgttggacacgtgtcgtgtctgacaccgacgcatataattacactgaattatgtgatt 5898303  T
Q  812 tttacaaattattagctgtgtcggcgt 838  Q
    ||| || ||||||||| ||||||||||    
T  5898304 ttttcagattattagcggtgtcggcgt 5898330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 764 - 839
Target Start/End: Original strand, 22881606 - 22881681
Alignment:
Q  764 gtgtcgtgcccgacaccgacacttgtaattacactgaattatgtgatttttacaaattattagctgtgtcggcgtg 839  Q
    |||||||| |||||||||||||||||||||||||| ||||||||||||||| ||||||||||| ||||||||||||    
T  22881606 gtgtcgtgtccgacaccgacacttgtaattacactaaattatgtgattttttcaaattattagttgtgtcggcgtg 22881681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 714 - 839
Target Start/End: Complemental strand, 113412 - 113293
Alignment:
Q  714 ctatgaagcacggtcacttctcggattaggtgtgtcccggtgacgtacacgtgtcgtgcccgacaccgacacttgtaattacactgaattatgtgatttt 813  Q
    |||||||||| || |||| ||||||||||| |||||||||||  | |||||       | ||||||| ||||||||||||||||||||||||||||||||    
T  113412 ctatgaagcatgggcactcctcggattaggcgtgtcccggtgttggacacga------cacgacacctacacttgtaattacactgaattatgtgatttt 113319  T
Q  814 tacaaattattagctgtgtcggcgtg 839  Q
    | ||||||||||||||||||||||||    
T  113318 ttcaaattattagctgtgtcggcgtg 113293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 712 - 839
Target Start/End: Original strand, 2896059 - 2896186
Alignment:
Q  712 acctatgaagcacggtcacttctcggattaggtgtgtcccggtgacgtacacgtgtcgtgcccgacaccgacacttgtaattacactgaattatgtgatt 811  Q
    ||||||||| || || ||||||| |||||||||||||||||||  || |||| ||||||| | ||||||||||  | ||  |||||||||||||||||||    
T  2896059 acctatgaaacatggacacttcttggattaggtgtgtcccggtctcggacacatgtcgtgtctgacaccgacatatatagctacactgaattatgtgatt 2896158  T
Q  812 tttacaaattattagctgtgtcggcgtg 839  Q
    ||  |||||||||||| |||||||||||    
T  2896159 ttctcaaattattagcggtgtcggcgtg 2896186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 774 - 839
Target Start/End: Original strand, 24577186 - 24577251
Alignment:
Q  774 cgacaccgacacttgtaattacactgaattatgtgatttttacaaattattagctgtgtcggcgtg 839  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||| |||||    
T  24577186 cgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagttgtgtcagcgtg 24577251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 728 - 833
Target Start/End: Complemental strand, 40181976 - 40181871
Alignment:
Q  728 cacttctcggattaggtgtgtcccggtgacgtacacgtgtcgtgcccgacaccgacacttgtaattacactgaattatgtgatttttacaaattattagc 827  Q
    |||| ||||||||||| |||||||||||  | |||||||| ||| |||||||||| || | |||||||||||||||||||||||||  ||||||||||||    
T  40181976 cactcctcggattaggcgtgtcccggtgtaggacacgtgttgtgtccgacaccgatacatataattacactgaattatgtgattttctcaaattattagc 40181877  T
Q  828 tgtgtc 833  Q
     |||||    
T  40181876 agtgtc 40181871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 768 - 839
Target Start/End: Original strand, 19058850 - 19058921
Alignment:
Q  768 cgtgcccgacaccgacacttgtaattacactgaattatgtgatttttacaaattattagctgtgtcggcgtg 839  Q
    |||| ||||||||||||||||||||||||||||||||||| || |||  |||||||||||||||||||||||    
T  19058850 cgtgtccgacaccgacacttgtaattacactgaattatgttatctttttaaattattagctgtgtcggcgtg 19058921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 768 - 835
Target Start/End: Original strand, 31672889 - 31672956
Alignment:
Q  768 cgtgcccgacaccgacacttgtaattacactgaattatgtgatttttacaaattattagctgtgtcgg 835  Q
    |||| |||||||||| ||||||||||||||||||||| ||||||||| ||||||||||||||||||||    
T  31672889 cgtgtccgacaccgagacttgtaattacactgaattaagtgattttttcaaattattagctgtgtcgg 31672956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 711 - 834
Target Start/End: Complemental strand, 18471417 - 18471297
Alignment:
Q  711 aacctatgaagcacggtcacttctcggattaggtgtgtcccggtgacgtacacgtgtcgtgcccgacaccgacacttgtaattacactgaattatgtgat 810  Q
    ||||||||||| |||| |||| |||| |||||||||||  ||||| || ||||||||||||      ||||||||||||||||| |||||||||||||||    
T  18471417 aacctatgaagtacggacactcctcgaattaggtgtgtttcggtgtcggacacgtgtcgtgt-----accgacacttgtaattatactgaattatgtgat 18471323  T
Q  811 --ttttacaaattattagctgtgtcg 834  Q
      |||| |||||||||||||||||||    
T  18471322 tttttttcaaattattagctgtgtcg 18471297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 714 - 839
Target Start/End: Complemental strand, 36878585 - 36878455
Alignment:
Q  714 ctatgaagcacggtcacttctcggattaggtgtgtcccggtgacgt-----acacgtgtcgtgcccgacaccgacacttgtaattacactgaattatgtg 808  Q
    ||||||||||||| |||| || |||||||| ||||||| ||| |||     ||| || ||||| | ||||||||||| | ||||||||||||||||||||    
T  36878585 ctatgaagcacggacactcctgggattaggcgtgtccccgtgtcgtgtcggacatgtttcgtgtcagacaccgacacctataattacactgaattatgtg 36878486  T
Q  809 atttttacaaattattagctgtgtcggcgtg 839  Q
    |||||  |||||||||||| |||||||||||    
T  36878485 attttctcaaattattagcggtgtcggcgtg 36878455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 774 - 835
Target Start/End: Original strand, 1704992 - 1705053
Alignment:
Q  774 cgacaccgacacttgtaattacactgaattatgtgatttttacaaattattagctgtgtcgg 835  Q
    |||||||||||||||||||||| |||||||||||||||||| ||||||||||| ||||||||    
T  1704992 cgacaccgacacttgtaattaccctgaattatgtgattttttcaaattattagatgtgtcgg 1705053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 774 - 839
Target Start/End: Original strand, 6612171 - 6612236
Alignment:
Q  774 cgacaccgacacttgtaattacactgaattatgtgatttttacaaattattagctgtgtcggcgtg 839  Q
    |||||||||||||||||||||||||||||||||| |||||| |||||||||| |||| ||||||||    
T  6612171 cgacaccgacacttgtaattacactgaattatgtaattttttcaaattattaactgtatcggcgtg 6612236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 712 - 839
Target Start/End: Complemental strand, 40917881 - 40917745
Alignment:
Q  712 acctatgaagcacggtcacttctcggattaggtgtgtcccggtgacgtacacgtgtcgtgcccgacaccgacac-----------ttgtaattacactga 800  Q
    ||||||||||||||| || | ||||||||||| ||||||||||| || |||||||||||| || ||||||||||           ||||||||||||| |    
T  40917881 acctatgaagcacggacagtcctcggattaggcgtgtcccggtgtcggacacgtgtcgtgtccaacaccgacacgacaccgagacttgtaattacactta 40917782  T
Q  801 attatgtgatttttacaaattattagctgtgtcggcgtg 839  Q
    |||  ||||||||| ||||||||||||||||||||||||    
T  40917781 att--gtgattttttcaaattattagctgtgtcggcgtg 40917745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 716 - 839
Target Start/End: Original strand, 16297223 - 16297348
Alignment:
Q  716 atgaagcacggtcacttctcggattaggtgtgtcccggtgacgtacacgtgtcgtgcccgacacc---gacacttgtaattacactgaattatgtgattt 812  Q
    ||||||||||| |||| ||||||||||| |||||| |||| || ||||  |||||| ||||||||   |||| |||||||||||||||||| ||||||||    
T  16297223 atgaagcacggacactcctcggattaggcgtgtcctggtgtcggacacacgtcgtgtccgacaccccggaca-ttgtaattacactgaattttgtgattt 16297321  T
Q  813 ttacaaattattagctgtgtcggcgtg 839  Q
    || || |||||| ||||||||| ||||    
T  16297322 tttcatattatttgctgtgtcgacgtg 16297348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 716 - 833
Target Start/End: Complemental strand, 17778670 - 17778549
Alignment:
Q  716 atgaagcacggtcacttctcggattaggtgtgtcccggtgacgtacacgtgtcgtgcc-------cgacaccgacacttgtaattacactgaattatgtg 808  Q
    ||||||||||  ||||||||||||||||  |||||||||| || |||||||||| | |       ||||||||||||||||||||||||||   ||||||    
T  17778670 atgaagcacgaacacttctcggattaggcatgtcccggtgtcggacacgtgtcgcgacaccgacacgacaccgacacttgtaattacactg---tatgtg 17778574  T
Q  809 atttttacaaattattagctgtgtc 833  Q
    |||||| ||||||||||||||||||    
T  17778573 attttttcaaattattagctgtgtc 17778549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 711 - 839
Target Start/End: Original strand, 29163318 - 29163446
Alignment:
Q  711 aacctatgaagcacggtcacttctcggattaggtgtgtcccggtgacgtacacgtgtcgtgcccgacaccgacacttgtaattacactgaattatgtgat 810  Q
    |||| ||||||||||  |||||||| ||||||  ||||||||||| |   ||||||||||| ||||||||||||| | |||||| | |||||||||||||    
T  29163318 aaccaatgaagcacgaacacttctctgattagccgtgtcccggtgtcaggcacgtgtcgtgtccgacaccgacacatataattaaattgaattatgtgat 29163417  T
Q  811 ttttacaaattattagctgtgtcggcgtg 839  Q
    |||   ||||| ||||| |||||||||||    
T  29163418 tttcctaaatttttagcggtgtcggcgtg 29163446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 714 - 839
Target Start/End: Original strand, 32461393 - 32461528
Alignment:
Q  714 ctatgaagcacggtcacttctcggattaggtgtgtcccggtgacgtacacgtgtcgtgcccgacaccg----------acacttgtaattacactgaatt 803  Q
    ||||||||||||| ||||||| |||||||| ||||||| ||| |  |||||||||||| |||||||||          ||||||||||||||| | ||||    
T  32461393 ctatgaagcacggacacttcttggattaggcgtgtcccagtgtcagacacgtgtcgtgtccgacaccgacacacaccaacacttgtaattacattaaatt 32461492  T
Q  804 atgtgatttttacaaattattagctgtgtcggcgtg 839  Q
    ||||||||||| ||||||||||| |||| |||||||    
T  32461493 atgtgattttttcaaattattagttgtgccggcgtg 32461528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 776 - 835
Target Start/End: Complemental strand, 21378635 - 21378576
Alignment:
Q  776 acaccgacacttgtaattacactgaattatgtgatttttacaaattattagctgtgtcgg 835  Q
    |||||||||||||||||||||||||||||||| |||||| ||| ||||||||||||||||    
T  21378635 acaccgacacttgtaattacactgaattatgtaattttttcaatttattagctgtgtcgg 21378576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 781 - 839
Target Start/End: Original strand, 14359529 - 14359586
Alignment:
Q  781 gacacttgtaattacactgaattatgtgatttttacaaattattagctgtgtcggcgtg 839  Q
    |||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||    
T  14359529 gacacttgtaattacactaaattatgtgattttt-caaattattagctgtgtcggcgtg 14359586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 779 - 837
Target Start/End: Complemental strand, 31015097 - 31015039
Alignment:
Q  779 ccgacacttgtaattacactgaattatgtgatttttacaaattattagctgtgtcggcg 837  Q
    |||||||||||||||||||||||||||||||||||  ||||||||||||||||| ||||    
T  31015097 ccgacacttgtaattacactgaattatgtgattttctcaaattattagctgtgtaggcg 31015039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 768 - 838
Target Start/End: Original strand, 41877464 - 41877534
Alignment:
Q  768 cgtgcccgacaccgacacttgtaattacactgaattatgtgatttttacaaattattagctgtgtcggcgt 838  Q
    |||| |||||||||||||||||||||||||| |||||||| |||||  |||||||||||| ||||||||||    
T  41877464 cgtgtccgacaccgacacttgtaattacactaaattatgtaattttctcaaattattagcggtgtcggcgt 41877534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 774 - 839
Target Start/End: Complemental strand, 47989556 - 47989492
Alignment:
Q  774 cgacaccgacacttgtaattacactgaattatgtgatttttacaaattattagctgtgtcggcgtg 839  Q
    |||||||||||||||||||||||||||||||||||||||||  |||||||||  ||||||||||||    
T  47989556 cgacaccgacacttgtaattacactgaattatgtgatttttttaaattatta-ttgtgtcggcgtg 47989492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 774 - 839
Target Start/End: Complemental strand, 5944342 - 5944275
Alignment:
Q  774 cgacaccgacacttgtaattacactgaattatgtgat--ttttacaaattattagctgtgtcggcgtg 839  Q
    |||||||||||||| ||||||||||||||||||||||  |||| |||||||||||||||| |||||||    
T  5944342 cgacaccgacacttataattacactgaattatgtgattttttttcaaattattagctgtggcggcgtg 5944275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 712 - 839
Target Start/End: Complemental strand, 9828176 - 9828038
Alignment:
Q  712 acctatgaagcacggtcacttctcggattaggtgtgtcccggtgacgtacacgtgtcgtgcc-----------cgacaccgacacttgtaattacactga 800  Q
    ||||||||||||||| |||| ||||||||||  ||||||||||| || |||||||||||| |           |||||||||||| |  |||||||||||    
T  9828176 acctatgaagcacggacactcctcggattagacgtgtcccggtgtcggacacgtgtcgtgtctgacacggacacgacaccgacacataaaattacactga 9828077  T
Q  801 attatgtgatttttacaaattattagctgtgtcggcgtg 839  Q
    |||||||||||||  |||||||||||  |||||||||||    
T  9828076 attatgtgattttatcaaattattagtggtgtcggcgtg 9828038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 779 - 839
Target Start/End: Original strand, 48450592 - 48450652
Alignment:
Q  779 ccgacacttgtaattacactgaattatgtgatttttacaaattattagctgtgtcggcgtg 839  Q
    |||||||||||||||||||| |||||||| |||||| ||||||||||||||||| ||||||    
T  48450592 ccgacacttgtaattacactaaattatgttattttttcaaattattagctgtgttggcgtg 48450652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 774 - 833
Target Start/End: Complemental strand, 6332729 - 6332671
Alignment:
Q  774 cgacaccgacacttgtaattacactgaattatgtgatttttacaaattattagctgtgtc 833  Q
    ||||||||| ||||||||||||||||||||||||||||||| ||||||||||| ||||||    
T  6332729 cgacaccgatacttgtaattacactgaattatgtgattttt-caaattattagttgtgtc 6332671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 789 - 839
Target Start/End: Original strand, 398780 - 398830
Alignment:
Q  789 taattacactgaattatgtgatttttacaaattattagctgtgtcggcgtg 839  Q
    |||||||||||||||||||||||||| |||||||||||| |||||||||||    
T  398780 taattacactgaattatgtgattttttcaaattattagcggtgtcggcgtg 398830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 773 - 839
Target Start/End: Complemental strand, 9103699 - 9103634
Alignment:
Q  773 ccgacaccgacacttgtaattacactgaattatgtgatttttacaaattattagctgtgtcggcgtg 839  Q
    |||||||||||||||||| ||| ||| ||||||||||||||| |||||||||| |||||||||||||    
T  9103699 ccgacaccgacacttgta-ttaaactaaattatgtgattttttcaaattattaactgtgtcggcgtg 9103634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 714 - 839
Target Start/End: Original strand, 18556385 - 18556521
Alignment:
Q  714 ctatgaagcacggtcacttctcggattaggtgtgtcccggtgacgtacacgtgtcgtgcccgacaccgacac-----------ttgtaattacactgaat 802  Q
    ||||||||||||| |||||||||||||||| ||||||| ||| || | |||||||| | | ||||||| |||           ||||||||||| | |||    
T  18556385 ctatgaagcacggacacttctcggattaggcgtgtcccagtgtcggatacgtgtcgggtctgacaccgtcacgacaccaatacttgtaattacattaaat 18556484  T
Q  803 tatgtgatttttacaaattattagctgtgtcggcgtg 839  Q
    |||||||| ||| ||||||||||||||||||||||||    
T  18556485 tatgtgatattttcaaattattagctgtgtcggcgtg 18556521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 775 - 833
Target Start/End: Original strand, 28273089 - 28273147
Alignment:
Q  775 gacaccgacacttgtaattacactgaattatgtgatttttacaaattattagctgtgtc 833  Q
    ||||||||||||||||||||||||||||||| |||||||| ||||| ||||| ||||||    
T  28273089 gacaccgacacttgtaattacactgaattatatgattttttcaaatgattagttgtgtc 28273147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 774 - 839
Target Start/End: Original strand, 5376500 - 5376565
Alignment:
Q  774 cgacaccgacacttgtaattacactgaattatgtgatttttacaaattattagctgtgtcggcgtg 839  Q
    |||||||||||||| ||||||||||||||||||| |||||   ||||||||||| |||||||||||    
T  5376500 cgacaccgacacttttaattacactgaattatgttattttcttaaattattagcggtgtcggcgtg 5376565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 790 - 839
Target Start/End: Original strand, 12443476 - 12443525
Alignment:
Q  790 aattacactgaattatgtgatttttacaaattattagctgtgtcggcgtg 839  Q
    ||||||||||||||||||||||||  ||||||||||||||||||||||||    
T  12443476 aattacactgaattatgtgattttctcaaattattagctgtgtcggcgtg 12443525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 767 - 836
Target Start/End: Original strand, 35702581 - 35702650
Alignment:
Q  767 tcgtgcccgacaccgacacttgtaattacactgaattatgtgatttttacaaattattagctgtgtcggc 836  Q
    ||||| ||||||| |||||||||||||||||| |||||| |||  ||| |||||||||||||||||||||    
T  35702581 tcgtgtccgacactgacacttgtaattacacttaattatttgaagttttcaaattattagctgtgtcggc 35702650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 776 - 835
Target Start/End: Original strand, 1864882 - 1864941
Alignment:
Q  776 acaccgacacttgtaattacactgaattatgtgatttttacaaattattagctgtgtcgg 835  Q
    |||||||||| | |||||||||||||||||||||||||  |||||||||| |||||||||    
T  1864882 acaccgacacatataattacactgaattatgtgattttctcaaattattaactgtgtcgg 1864941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 782 - 836
Target Start/End: Original strand, 13011223 - 13011278
Alignment:
Q  782 acacttgtaattacactgaattatgtga-tttttacaaattattagctgtgtcggc 836  Q
    ||||||||||||||||| |||||||||| ||||| |||||||||||||||||||||    
T  13011223 acacttgtaattacacttaattatgtgatttttttcaaattattagctgtgtcggc 13011278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 776 - 835
Target Start/End: Complemental strand, 23738735 - 23738676
Alignment:
Q  776 acaccgacacttgtaattacactgaattatgtgatttttacaaattattagctgtgtcgg 835  Q
    ||||| |||| | ||||| |||||||||||||||||||| ||||||||||||||||||||    
T  23738735 acaccaacacatttaattgcactgaattatgtgattttttcaaattattagctgtgtcgg 23738676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 774 - 834
Target Start/End: Original strand, 31694710 - 31694772
Alignment:
Q  774 cgacaccgacacttgtaattacactgaattatgtga--tttttacaaattattagctgtgtcg 834  Q
    ||||||||||||||||||||| ||||||||||||||  ||||| ||||||||||||| |||||    
T  31694710 cgacaccgacacttgtaattatactgaattatgtgattttttttcaaattattagctatgtcg 31694772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 776 - 835
Target Start/End: Original strand, 32434718 - 32434777
Alignment:
Q  776 acaccgacacttgtaattacactgaattatgtgatttttacaaattattagctgtgtcgg 835  Q
    |||| |||||||||||||||| |||||||||||| |||| ||||||||||| ||||||||    
T  32434718 acacagacacttgtaattacaatgaattatgtgactttttcaaattattagttgtgtcgg 32434777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 715 - 832
Target Start/End: Original strand, 5927281 - 5927398
Alignment:
Q  715 tatgaagcacggtcacttctcggattaggtgtgtcccggtgacgtacacgtgtcgtgcccgacaccgacacttgtaattacactgaattatgtgattttt 814  Q
    |||||||||||| |||| ||| |||||||  |||  || || || |||  |||| || ||||||| |||||||||||||||| | |||||| ||||||||    
T  5927281 tatgaagcacggacactcctcagattaggcatgtttcgatgtcggacatttgtcatgtccgacactgacacttgtaattacattaaattatatgattttt 5927380  T
Q  815 acaaattattagctgtgt 832  Q
     |||||||||||| ||||    
T  5927381 tcaaattattagcagtgt 5927398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 713 - 826
Target Start/End: Original strand, 7918153 - 7918263
Alignment:
Q  713 cctatgaagcacggtcacttctcggattaggtgtgtcccggtgacgtacacgtgtcgtgcc-cgacaccgacacttgtaattacactgaattatgtgatt 811  Q
    |||||||||||||| |||| |||||||||||||||||| |||| |  | ||||    || | |||||| ||||| | |||||||||||||||||||||||    
T  7918153 cctatgaagcacggacactcctcggattaggtgtgtcctggtgtcagaaacgt----tgacacgacactgacacatataattacactgaattatgtgatt 7918248  T
Q  812 tttacaaattattag 826  Q
    ||  |||||||||||    
T  7918249 ttctcaaattattag 7918263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 763 - 835
Target Start/End: Original strand, 24334694 - 24334767
Alignment:
Q  763 cgtgtcgtgcccgacaccgacacttgtaattacactgaattatg-tgatttttacaaattattagctgtgtcgg 835  Q
    |||| |||| ||||||||||||||||||||||||||||||||||    ||||| ||||| ||||||||||||||    
T  24334694 cgtgacgtgtccgacaccgacacttgtaattacactgaattatgcattttttttcaaatgattagctgtgtcgg 24334767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 781 - 838
Target Start/End: Original strand, 29144365 - 29144422
Alignment:
Q  781 gacacttgtaattacactgaattatgtgatttttacaaattattagctgtgtcggcgt 838  Q
    ||||||||||||||||||| ||||| |  ||||| |||||||||||||||||||||||    
T  29144365 gacacttgtaattacactgcattatctatttttttcaaattattagctgtgtcggcgt 29144422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 774 - 834
Target Start/End: Original strand, 9629900 - 9629960
Alignment:
Q  774 cgacaccgacacttgtaattacactgaattatgtgatttttacaaattattagctgtgtcg 834  Q
    |||||||||||||| |||| |||||||||||| |||||||  |||||||||||| ||||||    
T  9629900 cgacaccgacacttataatcacactgaattatatgattttatcaaattattagcggtgtcg 9629960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 715 - 839
Target Start/End: Original strand, 10577676 - 10577800
Alignment:
Q  715 tatgaagcacggtcacttctcggattaggtgtgtcccggtgacgtacacgtgtcgtgcccgacaccgacacttgtaattacactgaattatgtgattttt 814  Q
    |||||||||||| |||| || |||| ||| ||||||| ||| |  ||||| |||||| ||| | ||||||| | ||||||||||| ||| |||||||||     
T  10577676 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgcgtcgtgtccgcccccgacacatataattacactgcattttgtgattttc 10577775  T
Q  815 acaaattattagctgtgtcggcgtg 839  Q
      |||  ||||||||||||||||||    
T  10577776 taaaaaaattagctgtgtcggcgtg 10577800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 714 - 839
Target Start/End: Original strand, 19562556 - 19562686
Alignment:
Q  714 ctatgaagcacggtcacttctcggattaggtgtgtcccggtgacgtacacgtgtcgtgcccgacaccgacacttg------taattacactgaattatgt 807  Q
    ||||||||||||  |||| ||||||||||||||||||| ||| || |||||||| ||  ||||||| ||||| |       ||||||||||||| ||||     
T  19562556 ctatgaagcacga-cactcctcggattaggtgtgtccctgtgtcggacacgtgttgtatccgacactgacacctacacatataattacactgaactatga 19562654  T
Q  808 gatttttacaaattattagctgtgtcggcgtg 839  Q
    ||||||  |||||||||||| |||||||||||    
T  19562655 gattttctcaaattattagcagtgtcggcgtg 19562686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 780 - 839
Target Start/End: Original strand, 3490396 - 3490455
Alignment:
Q  780 cgacacttgtaattacactgaattatgtgatttttacaaattattagctgtgtcggcgtg 839  Q
    ||||||||||||||||||||||| ||||  ||||  |||||||||||| |||||||||||    
T  3490396 cgacacttgtaattacactgaataatgtagttttctcaaattattagcagtgtcggcgtg 3490455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 776 - 839
Target Start/End: Original strand, 10572591 - 10572654
Alignment:
Q  776 acaccgacacttgtaattacactgaattatgtgatttttacaaattattagctgtgtcggcgtg 839  Q
    |||||||||| | ||||||||| |||||||||||||||  |||||||||||  |||||||||||    
T  10572591 acaccgacacatttaattacaccgaattatgtgattttctcaaattattagtggtgtcggcgtg 10572654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 768 - 839
Target Start/End: Complemental strand, 13436523 - 13436452
Alignment:
Q  768 cgtgcccgacaccgacacttgtaattacactgaattatgtgatttttacaaattattagctgtgtcggcgtg 839  Q
    |||| |||||||| |||| | ||||||||||||||||||||||||    ||||||||||| |||||||||||    
T  13436523 cgtgtccgacaccaacacatataattacactgaattatgtgatttccttaaattattagcagtgtcggcgtg 13436452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 776 - 839
Target Start/End: Complemental strand, 13997940 - 13997877
Alignment:
Q  776 acaccgacacttgtaattacactgaattatgtgatttttacaaattattagctgtgtcggcgtg 839  Q
    |||||||||| | ||||||||||||||||||||||||||  |||| |||| | |||||||||||    
T  13997940 acaccgacacatataattacactgaattatgtgatttttttaaataattaacggtgtcggcgtg 13997877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 764 - 839
Target Start/End: Complemental strand, 21530758 - 21530683
Alignment:
Q  764 gtgtcgtgcccgacaccgacacttgtaattacactgaattatgtgatttttacaaattattagctgtgtcggcgtg 839  Q
    |||||||| ||||||||||||||| |||||| ||  |||||| |||||||  |||||||||| | |||||||||||    
T  21530758 gtgtcgtgtccgacaccgacacttataattataccaaattatatgattttctcaaattattaacggtgtcggcgtg 21530683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 774 - 833
Target Start/End: Complemental strand, 25272541 - 25272482
Alignment:
Q  774 cgacaccgacacttgtaattacactgaattatgtgatttttacaaattattagctgtgtc 833  Q
    |||||||||||||| |||||||||| ||||||||||||||  |||||| ||| |||||||    
T  25272541 cgacaccgacacttataattacactaaattatgtgattttctcaaattgttaactgtgtc 25272482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 719 - 814
Target Start/End: Complemental strand, 26830701 - 26830607
Alignment:
Q  719 aagcacggtcacttctcggattaggtgtgtcccggtgacgtacacgtgtcgtgcccgacaccgacacttgtaattacactgaattatgtgattttt 814  Q
    |||||||| |||| ||| ||||||| ||||||||||  || |||||||| ||| | ||||| ||||||| |||||||| | |||||||||||||||    
T  26830701 aagcacggacactcctctgattaggcgtgtcccggtatcgaacacgtgtagtgtctgacac-gacacttataattacatttaattatgtgattttt 26830607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 789 - 839
Target Start/End: Complemental strand, 1262928 - 1262878
Alignment:
Q  789 taattacactgaattatgtgatttttacaaattattagctgtgtcggcgtg 839  Q
    |||||| | ||||||||||||||||  ||||||||||||||||||||||||    
T  1262928 taattatattgaattatgtgattttctcaaattattagctgtgtcggcgtg 1262878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 768 - 814
Target Start/End: Complemental strand, 21621020 - 21620974
Alignment:
Q  768 cgtgcccgacaccgacacttgtaattacactgaattatgtgattttt 814  Q
    |||| ||||||||||| ||||||| ||||||||||||||||||||||    
T  21621020 cgtgtccgacaccgacgcttgtaaatacactgaattatgtgattttt 21620974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 774 - 839
Target Start/End: Complemental strand, 6427409 - 6427344
Alignment:
Q  774 cgacaccgacacttgtaattacactgaattatgtgatttttacaaattattagctgtgtcggcgtg 839  Q
    ||||||| |||| | |||||||| ||||||||||||||||  |||||||||||| |||| ||||||    
T  6427409 cgacaccaacacatataattacattgaattatgtgattttctcaaattattagcggtgttggcgtg 6427344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 713 - 836
Target Start/End: Complemental strand, 6427595 - 6427458
Alignment:
Q  713 cctatgaagcacggtcacttctcggattaggtgtgtcccggtgacgtacacgtgtcgtg-----------cccgacaccgacacttgtaattacactgaa 801  Q
    |||||||||||||| ||||  || ||||||| ||||||||||| || ||||||||||||           | |||||| |||||||||| ||||| ||||    
T  6427595 cctatgaagcacggacactcatcagattaggcgtgtcccggtgtcggacacgtgtcgtgtccgacgcctacacgacactgacacttgtagttacattgaa 6427496  T
Q  802 ttatgtga---tttttacaaattattagctgtgtcggc 836  Q
    ||||||||   ||||| ||||||||||| |||||||||    
T  6427495 ttatgtgatttttttttcaaattattagttgtgtcggc 6427458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 760 - 813
Target Start/End: Complemental strand, 30749913 - 30749860
Alignment:
Q  760 acacgtgtcgtgcccgacaccgacacttgtaattacactgaattatgtgatttt 813  Q
    |||| ||| ||| ||||||||||||| | |||||||||||||||||||||||||    
T  30749913 acacatgtggtgtccgacaccgacacatataattacactgaattatgtgatttt 30749860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 760 - 813
Target Start/End: Complemental strand, 30771364 - 30771311
Alignment:
Q  760 acacgtgtcgtgcccgacaccgacacttgtaattacactgaattatgtgatttt 813  Q
    |||| ||| ||| ||||||||||||| | |||||||||||||||||||||||||    
T  30771364 acacatgtggtgtccgacaccgacacatataattacactgaattatgtgatttt 30771311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 773 - 838
Target Start/End: Original strand, 39953145 - 39953210
Alignment:
Q  773 ccgacaccgacacttgtaattacactgaattatgtgatttttacaaattattagctgtgtcggcgt 838  Q
    ||||||||||||| |  ||||||||| ||||||||||||||   ||||||||||| ||||||||||    
T  39953145 ccgacaccgacacatacaattacactaaattatgtgattttctaaaattattagcggtgtcggcgt 39953210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 734 - 839
Target Start/End: Original strand, 43492454 - 43492559
Alignment:
Q  734 tcggattaggtgtgtcccggtgacgtacacgtgtcgtgcccgacaccgacacttgtaattacactgaattatgtgatttttacaaattattagctgtgtc 833  Q
    |||||||||| |||| |||||| || ||| |||| ||| | |||||||||||   ||||||||| |||||| ||||||||  ||||||| |||  |||||    
T  43492454 tcggattaggcgtgtgccggtgtcggacatgtgttgtgtctgacaccgacacacataattacaccgaattacgtgattttctcaaattactagtggtgtc 43492553  T
Q  834 ggcgtg 839  Q
    ||||||    
T  43492554 ggcgtg 43492559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 774 - 823
Target Start/End: Complemental strand, 44482289 - 44482240
Alignment:
Q  774 cgacaccgacacttgtaattacactgaattatgtgatttttacaaattat 823  Q
    |||||||||||| | |||||||||||||||||||||||||  ||||||||    
T  44482289 cgacaccgacacatataattacactgaattatgtgattttctcaaattat 44482240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 768 - 832
Target Start/End: Complemental strand, 9709885 - 9709821
Alignment:
Q  768 cgtgcccgacaccgacacttgtaattacactgaattatgtgatttttacaaattattagctgtgt 832  Q
    |||| ||||||||||||| | ||||||||  |||||||||||||||  |||||||||||| ||||    
T  9709885 cgtgtccgacaccgacacatataattacaacgaattatgtgattttctcaaattattagcggtgt 9709821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 715 - 811
Target Start/End: Complemental strand, 12919063 - 12918967
Alignment:
Q  715 tatgaagcacggtcacttctcggattaggtgtgtcccggtgacgtacacgtgtcgtgcccgacaccgacacttgtaattacactgaattatgtgatt 811  Q
    |||||||||||  |||||||||||| ||  ||||||| ||| |  |||||||||||| |||| ||| |||| | |||| ||| ||||||||||||||    
T  12919063 tatgaagcacgaacacttctcggataagccgtgtccccgtgtcagacacgtgtcgtgtccgataccaacacatataatcacattgaattatgtgatt 12918967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 766 - 826
Target Start/End: Original strand, 14332634 - 14332694
Alignment:
Q  766 gtcgtgcccgacaccgacacttgtaattacactgaattatgtgatttttacaaattattag 826  Q
    |||||| |||||||||| || | |||||||||| ||||||||||||||  |||||||||||    
T  14332634 gtcgtgtccgacaccgagacatataattacactaaattatgtgattttctcaaattattag 14332694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 774 - 814
Target Start/End: Original strand, 15449232 - 15449272
Alignment:
Q  774 cgacaccgacacttgtaattacactgaattatgtgattttt 814  Q
    |||||| |||||||||||||||||| |||||||||||||||    
T  15449232 cgacacagacacttgtaattacactaaattatgtgattttt 15449272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #77
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 791 - 839
Target Start/End: Original strand, 17831548 - 17831596
Alignment:
Q  791 attacactgaattatgtgatttttacaaattattagctgtgtcggcgtg 839  Q
    |||||||||||| ||||||||||  |||||||||||| |||||||||||    
T  17831548 attacactgaataatgtgattttctcaaattattagcggtgtcggcgtg 17831596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #78
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 774 - 834
Target Start/End: Original strand, 20157350 - 20157410
Alignment:
Q  774 cgacaccgacacttgtaattacactgaattatgtgatttttacaaattattagctgtgtcg 834  Q
    |||||||||||| | | |||||||||||||||||||||||  || ||||||||| ||||||    
T  20157350 cgacaccgacacatatgattacactgaattatgtgattttctcacattattagcggtgtcg 20157410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #79
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 774 - 838
Target Start/End: Complemental strand, 25361945 - 25361881
Alignment:
Q  774 cgacaccgacacttgtaattacactgaattatgtgatttttacaaattattagctgtgtcggcgt 838  Q
    |||||| ||||| | |||||||||||||||||||||||||  |||||||| ||  ||||||||||    
T  25361945 cgacactgacacatataattacactgaattatgtgattttctcaaattatcagtggtgtcggcgt 25361881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #80
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 775 - 827
Target Start/End: Original strand, 27471567 - 27471619
Alignment:
Q  775 gacaccgacacttgtaattacactgaattatgtgatttttacaaattattagc 827  Q
    |||||| |||| |||||||||||||||||||||| ||||  ||||||||||||    
T  27471567 gacaccaacacatgtaattacactgaattatgtgcttttctcaaattattagc 27471619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #81
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 774 - 814
Target Start/End: Complemental strand, 28663667 - 28663627
Alignment:
Q  774 cgacaccgacacttgtaattacactgaattatgtgattttt 814  Q
    |||||||||||||||||||||||  ||||||||||||||||    
T  28663667 cgacaccgacacttgtaattacatagaattatgtgattttt 28663627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #82
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 774 - 814
Target Start/End: Original strand, 30173762 - 30173802
Alignment:
Q  774 cgacaccgacacttgtaattacactgaattatgtgattttt 814  Q
    ||||||||||||||||||||||||||| |||||| ||||||    
T  30173762 cgacaccgacacttgtaattacactgagttatgtaattttt 30173802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #83
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 774 - 814
Target Start/End: Original strand, 35919276 - 35919316
Alignment:
Q  774 cgacaccgacacttgtaattacactgaattatgtgattttt 814  Q
    |||||| ||||||| ||||||||||||||||||||||||||    
T  35919276 cgacacggacacttataattacactgaattatgtgattttt 35919316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #84
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 775 - 835
Target Start/End: Complemental strand, 38503378 - 38503318
Alignment:
Q  775 gacaccgacacttgtaattacactgaattatgtgatttttacaaattattagctgtgtcgg 835  Q
    ||||||||||| | ||||||||||||| ||| |||||||  |||||||||||| |||||||    
T  38503378 gacaccgacacatataattacactgaaatatatgattttctcaaattattagcggtgtcgg 38503318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #85
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 789 - 828
Target Start/End: Original strand, 16927200 - 16927239
Alignment:
Q  789 taattacactgaattatgtgatttttacaaattattagct 828  Q
    ||||||||||||||||| |||||||| |||||||||||||    
T  16927200 taattacactgaattatatgattttttcaaattattagct 16927239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #86
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 792 - 835
Target Start/End: Complemental strand, 17754352 - 17754309
Alignment:
Q  792 ttacactgaattatgtgatttttacaaattattagctgtgtcgg 835  Q
    |||||||||||||||| |||||| |||||||||||| |||||||    
T  17754352 ttacactgaattatgtaattttttcaaattattagcggtgtcgg 17754309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #87
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 792 - 835
Target Start/End: Complemental strand, 23653040 - 23652997
Alignment:
Q  792 ttacactgaattatgtgatttttacaaattattagctgtgtcgg 835  Q
    |||||||||| |||||||||||| ||||||||||||| ||||||    
T  23653040 ttacactgaagtatgtgattttttcaaattattagctttgtcgg 23652997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #88
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 789 - 836
Target Start/End: Original strand, 25098570 - 25098617
Alignment:
Q  789 taattacactgaattatgtgatttttacaaattattagctgtgtcggc 836  Q
    |||||||||||||||||||||||||  |||||||| ||| ||||||||    
T  25098570 taattacactgaattatgtgattttctcaaattatcagcggtgtcggc 25098617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #89
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 774 - 813
Target Start/End: Complemental strand, 34371772 - 34371733
Alignment:
Q  774 cgacaccgacacttgtaattacactgaattatgtgatttt 813  Q
    |||||||||||| | |||||||||||||||||||||||||    
T  34371772 cgacaccgacacatataattacactgaattatgtgatttt 34371733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #90
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 768 - 839
Target Start/End: Complemental strand, 52903314 - 52903243
Alignment:
Q  768 cgtgcccgacaccgacacttgtaattacactgaattatgtgatttttacaaattattagctgtgtcggcgtg 839  Q
    |||| ||||||||||||| | ||||||||||||||||| |||||||   ||||||||| | || ||||||||    
T  52903314 cgtgtccgacaccgacacatataattacactgaattatatgattttattaaattattaacggtatcggcgtg 52903243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #91
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 774 - 808
Target Start/End: Complemental strand, 2218298 - 2218264
Alignment:
Q  774 cgacaccgacacttgtaattacactgaattatgtg 808  Q
    ||||||||||||||||||||||||| |||||||||    
T  2218298 cgacaccgacacttgtaattacactaaattatgtg 2218264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #92
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 735 - 839
Target Start/End: Original strand, 9690234 - 9690337
Alignment:
Q  735 cggattaggtgtgtcccggtgacgtacacgtgtc-gtgcccgacaccgacacttgtaattacactgaattatgtgatttttacaaattattagctgtgtc 833  Q
    ||||||||| ||||||||||| || ||||||||| ||| ||||| ||||||| | | ||||||||||||  |||||||||  ||  |||||||| |||||    
T  9690234 cggattaggcgtgtcccggtgtcggacacgtgtcagtggccgacgccgacacatatgattacactgaat--tgtgattttctcagtttattagcggtgtc 9690331  T
Q  834 ggcgtg 839  Q
     |||||    
T  9690332 agcgtg 9690337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #93
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 793 - 839
Target Start/End: Original strand, 21366039 - 21366085
Alignment:
Q  793 tacactgaattatgtgatttttacaaattattagctgtgtcggcgtg 839  Q
    ||||||||||||||| ||||||  ||||||||||||||| |||||||    
T  21366039 tacactgaattatgttattttttaaaattattagctgtgccggcgtg 21366085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #94
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 789 - 835
Target Start/End: Complemental strand, 34298480 - 34298434
Alignment:
Q  789 taattacactgaattatgtgatttttacaaattattagctgtgtcgg 835  Q
    |||||||||||||||||||||||||  |||||||||||  |||||||    
T  34298480 taattacactgaattatgtgattttctcaaattattagtggtgtcgg 34298434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #95
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 773 - 839
Target Start/End: Original strand, 38075969 - 38076035
Alignment:
Q  773 ccgacaccgacacttgtaattacactgaattatgtgatttttacaaattattagctgtgtcggcgtg 839  Q
    ||||||||||||| | | |||||||||| |||||||||||   |||||||||||| |||||| ||||    
T  38075969 ccgacaccgacacatatgattacactgacttatgtgatttactcaaattattagcagtgtcgtcgtg 38076035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #96
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 778 - 839
Target Start/End: Original strand, 48040465 - 48040527
Alignment:
Q  778 accgacacttgtaattacactgaattatgtgat-ttttacaaattattagctgtgtcggcgtg 839  Q
    ||||||||||||| ||||||| || |||||||  |||| |||||||||| |||||||||||||    
T  48040465 accgacacttgtatttacactaaaatatgtgacctttttcaaattattatctgtgtcggcgtg 48040527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #97
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 774 - 823
Target Start/End: Complemental strand, 2283725 - 2283676
Alignment:
Q  774 cgacaccgacacttgtaattacactgaattatgtgatttttacaaattat 823  Q
    ||||||| |||||| |||||||| ||||| ||||||||||| ||||||||    
T  2283725 cgacaccaacacttataattacattgaatcatgtgattttttcaaattat 2283676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #98
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 794 - 839
Target Start/End: Original strand, 10474997 - 10475042
Alignment:
Q  794 acactgaattatgtgatttttacaaattattagctgtgtcggcgtg 839  Q
    ||||||||||||||||||||  ||| |||||||| |||||||||||    
T  10474997 acactgaattatgtgattttctcaagttattagcggtgtcggcgtg 10475042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #99
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 782 - 827
Target Start/End: Original strand, 11605943 - 11605988
Alignment:
Q  782 acacttgtaattacactgaattatgtgatttttacaaattattagc 827  Q
    |||| ||||||| ||||||||||| |||||||| ||||||||||||    
T  11605943 acacatgtaatttcactgaattatatgattttttcaaattattagc 11605988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #100
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 781 - 830
Target Start/End: Complemental strand, 15323215 - 15323166
Alignment:
Q  781 gacacttgtaattacactgaattatgtgatttttacaaattattagctgt 830  Q
    |||||||  ||||||||| ||||||||||||||| |||||||||| ||||    
T  15323215 gacacttacaattacactaaattatgtgattttttcaaattattaactgt 15323166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #101
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 789 - 834
Target Start/End: Complemental strand, 19324606 - 19324561
Alignment:
Q  789 taattacactgaattatgtgatttttacaaattattagctgtgtcg 834  Q
    |||||||||||||||||||||||||  |||||||| ||| ||||||    
T  19324606 taattacactgaattatgtgattttctcaaattatcagcagtgtcg 19324561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #102
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 712 - 785
Target Start/End: Complemental strand, 25934748 - 25934675
Alignment:
Q  712 acctatgaagcacggtcacttctcggattaggtgtgtcccggtgacgtacacgtgtcgtgcccgacaccgacac 785  Q
    ||||||||||||||| |||| || |||| ||| || |||| ||| |  |||||||||||| |||||||||||||    
T  25934748 acctatgaagcacggacactccttggataaggcgtatccccgtgtcagacacgtgtcgtgtccgacaccgacac 25934675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #103
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 714 - 827
Target Start/End: Original strand, 34712323 - 34712436
Alignment:
Q  714 ctatgaagcacggtcacttctcggattaggtgtgtcccggtgacgtacacgtgtcgtgcccgacaccgacacttgtaattacactgaattatgtgatttt 813  Q
    ||||||||||||| |||| || | |||||  ||||||| |||  | |||||||||   | |||||| ||||| | |||||||||| |||||||| |||||    
T  34712323 ctatgaagcacggacactccttgaattagacgtgtcccagtgtaggacacgtgtccgacacgacactgacacatataattacactaaattatgttatttt 34712422  T
Q  814 tacaaattattagc 827  Q
      ||||||||||||    
T  34712423 ctcaaattattagc 34712436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053 (Bit Score: 74; Significance: 2e-33; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 714 - 839
Target Start/End: Complemental strand, 8917 - 8792
Alignment:
Q  714 ctatgaagcacggtcacttctcggattaggtgtgtcccggtgacgtacacgtgtcgtgcccgacaccgacacttgtaattacactgaattatgtgatttt 813  Q
    |||||||||||||  ||| ||| ||||||| ||||| ||||| || |||||||||||| |||||||||||||||||||||||||| ||| || |||||||    
T  8917 ctatgaagcacggagactcctcagattaggcgtgtctcggtgtcggacacgtgtcgtgtccgacaccgacacttgtaattacactaaataatatgatttt 8818  T
Q  814 tacaaattattagctgtgtcggcgtg 839  Q
    | ||||||||||||||||||||||||    
T  8817 ttcaaattattagctgtgtcggcgtg 8792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 74; Significance: 2e-33; HSPs: 72)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 714 - 839
Target Start/End: Original strand, 36450694 - 36450819
Alignment:
Q  714 ctatgaagcacggtcacttctcggattaggtgtgtcccggtgacgtacacgtgtcgtgcccgacaccgacacttgtaattacactgaattatgtgatttt 813  Q
    ||||||||||| | |||| ||||||||||| |||||| |||| || ||||| |||||| |||||||| |||||||||||||||||||||| |||||||||    
T  36450694 ctatgaagcacagacactcctcggattaggcgtgtcctggtgtcggacacgcgtcgtgtccgacacctacacttgtaattacactgaattctgtgatttt 36450793  T
Q  814 tacaaattattagctgtgtcggcgtg 839  Q
    | ||||||||||| ||||||||||||    
T  36450794 ttcaaattattagttgtgtcggcgtg 36450819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 73; E-Value: 7e-33
Query Start/End: Original strand, 711 - 839
Target Start/End: Complemental strand, 5813714 - 5813586
Alignment:
Q  711 aacctatgaagcacggtcacttctcggattaggtgtgtcccggtgacgtacacgtgtcgtgcccgacaccgacacttgtaattacactgaattatgtgat 810  Q
    |||||| ||||||||| |||| |||  |||||| ||||||||||| || |||||||||||| |||||||||||||||||| ||||||| || |||||||     
T  5813714 aacctacgaagcacggacactcctccaattaggcgtgtcccggtgtcggacacgtgtcgtgtccgacaccgacacttgtatttacactaaaatatgtgac 5813615  T
Q  811 ttttacaaattattagctgtgtcggcgtg 839  Q
    |||| ||||||||||||||||||||||||    
T  5813614 tttttcaaattattagctgtgtcggcgtg 5813586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 709 - 839
Target Start/End: Original strand, 29510228 - 29510369
Alignment:
Q  709 ataacctatgaagcacggtcacttctcggattaggtgtgtcccggtgacgtacacgtgtcgtgcccg-----------acaccgacacttgtaattacac 797  Q
    |||||||||||||||||| |||| ||||||||||||||||||||||| || ||||| |||||| |||           ||||||||||||||||||| ||    
T  29510228 ataacctatgaagcacggacactcctcggattaggtgtgtcccggtgtcggacacgcgtcgtgtccgacaccgacactacaccgacacttgtaattatac 29510327  T
Q  798 tgaattatgtgatttttacaaattattagctgtgtcggcgtg 839  Q
    |||||| |||||||||| ||||||||||||||||||||||||    
T  29510328 tgaattttgtgattttttcaaattattagctgtgtcggcgtg 29510369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 712 - 833
Target Start/End: Complemental strand, 40332312 - 40332191
Alignment:
Q  712 acctatgaagcacggtcacttctcggattaggtgtgtcccggtgacgtacacgtgtcgtgcccgacaccgacacttgtaattacactgaattatgtgatt 811  Q
    |||| |||| ||||| |||| ||||||||||| | |||||||||  | |||||||||||| || ||||||||||||||||||||||||||||||||||||    
T  40332312 acctgtgaaacacggacactcctcggattaggcgcgtcccggtgtgggacacgtgtcgtgtcccacaccgacacttgtaattacactgaattatgtgatt 40332213  T
Q  812 tttacaaattattagctgtgtc 833  Q
    ||  ||||||||| || |||||    
T  40332212 ttctcaaattatttgcagtgtc 40332191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 712 - 836
Target Start/End: Complemental strand, 18407840 - 18407716
Alignment:
Q  712 acctatgaagcacggtcacttctcggattaggtgtgtcccggtgacgtacacgtgtcgtgcccgacaccgacacttgtaattacactgaattatgtgatt 811  Q
    ||||||||||||||| |||| |||  |||||| ||||||  ||| || ||| |||||||| ||| || ||||||||||||||||||||||||||||||||    
T  18407840 acctatgaagcacggacactcctccaattaggcgtgtcctagtgtcggacatgtgtcgtgtccggcagcgacacttgtaattacactgaattatgtgatt 18407741  T
Q  812 tttacaaattattagctgtgtcggc 836  Q
    |||   |||||||||||||||||||    
T  18407740 tttttgaattattagctgtgtcggc 18407716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 736 - 839
Target Start/End: Complemental strand, 31557093 - 31556991
Alignment:
Q  736 ggattaggtgtgtcccggtgacgtacacgtgtcgtgcccgacaccgacacttgtaattacactgaattatgtgatttttacaaattattagctgtgtcgg 835  Q
    |||||||| |||||| |||| || ||| |||||||| | |||||||| ||||||||||||||||||||||||||||||| |||||||||| |||||||||    
T  31557093 ggattaggcgtgtcctggtgtcggacatgtgtcgtgtctgacaccgaaacttgtaattacactgaattatgtgattttt-caaattattaactgtgtcgg 31556995  T
Q  836 cgtg 839  Q
    ||||    
T  31556994 cgtg 31556991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 760 - 839
Target Start/End: Complemental strand, 20873142 - 20873063
Alignment:
Q  760 acacgtgtcgtgcccgacaccgacacttgtaattacactgaattatgtgatttttacaaattattagctgtgtcggcgtg 839  Q
    |||||| ||||| |||||||||||||||||||||||||| ||||||||||||||| |||||||||| || ||||||||||    
T  20873142 acacgtatcgtgtccgacaccgacacttgtaattacactaaattatgtgattttttcaaattattatctatgtcggcgtg 20873063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 760 - 839
Target Start/End: Complemental strand, 22596067 - 22595988
Alignment:
Q  760 acacgtgtcgtgcccgacaccgacacttgtaattacactgaattatgtgatttttacaaattattagctgtgtcggcgtg 839  Q
    |||||||||| | |||||||| |||||||||||||||||||||||||| ||||||  |||||||||||||||||||||||    
T  22596067 acacgtgtcgcgtccgacaccaacacttgtaattacactgaattatgttatttttttaaattattagctgtgtcggcgtg 22595988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 715 - 835
Target Start/End: Complemental strand, 24613640 - 24613519
Alignment:
Q  715 tatgaagcacggtcacttctcggattaggtgtgtcccggtgacgtacacgtgtcg--tgcccgacaccgacacttgtaattacactgaattatgtgattt 812  Q
    |||||||||||| ||||||||  |||||| |||||||| || |||    ||||||  || |||||||||||||||||||||||||| |||||||||||||    
T  24613640 tatgaagcacggacacttctccaattaggcgtgtcccgatgtcgtgtcggtgtcgcgtgtccgacaccgacacttgtaattacacttaattatgtgattt 24613541  T
Q  813 ttacaaattattagctgtgtcgg 835  Q
    || ||||||||||||||||||||    
T  24613540 tt-caaattattagctgtgtcgg 24613519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 774 - 833
Target Start/End: Complemental strand, 25566900 - 25566841
Alignment:
Q  774 cgacaccgacacttgtaattacactgaattatgtgatttttacaaattattagctgtgtc 833  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  25566900 cgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctgtgtc 25566841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 713 - 835
Target Start/End: Complemental strand, 8343087 - 8342970
Alignment:
Q  713 cctatgaagcacggtcacttctcggattaggtgtgtcccggtgacgtacacgtgtcgtgcccgacaccgacacttgtaattacactgaattatgtgattt 812  Q
    |||||||||||| | ||||  |||||||||| ||||||||||| || |||| |||      ||||||||||||||||||||||||| |||||||||||||    
T  8343087 cctatgaagcacagacactcttcggattaggcgtgtcccggtgtcggacacatgta-----cgacaccgacacttgtaattacactaaattatgtgattt 8342993  T
Q  813 ttacaaattattagctgtgtcgg 835  Q
    || ||||||||||||| ||||||    
T  8342992 tttcaaattattagctatgtcgg 8342970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 714 - 839
Target Start/End: Original strand, 15816058 - 15816194
Alignment:
Q  714 ctatgaagcacggtcacttctcggattaggtgtgtcccggtgacgtacacgtgtcgtgcccgac-----------accgacacttgtaattacactgaat 802  Q
    ||||||||||||| |||||||||||||||| ||||||||||| || |  ||||||||| |||||           |||||||||| |||||||||| |||    
T  15816058 ctatgaagcacggacacttctcggattaggcgtgtcccggtgtcggattcgtgtcgtgtccgacaccaacacgacaccgacacttataattacactaaat 15816157  T
Q  803 tatgtgatttttacaaattattagctgtgtcggcgtg 839  Q
    |||||||||||| ||||||||||| ||||||||||||    
T  15816158 tatgtgattttttcaaattattagttgtgtcggcgtg 15816194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 714 - 839
Target Start/End: Complemental strand, 22652106 - 22651970
Alignment:
Q  714 ctatgaagcacggtcacttctcggattaggtgtgtcccggtgacgtacacgtgtcgtgcccgacaccgacac-----------ttgtaattacactgaat 802  Q
    ||||||||||||| |||| ||||||||||  ||||||||||| || |||| ||||||| |||||||||||||           ||||||||| | |||||    
T  22652106 ctatgaagcacggacactcctcggattagacgtgtcccggtgtcggacacatgtcgtgtccgacaccgacacgacaccgacacttgtaattatattgaat 22652007  T
Q  803 tatgtgatttttacaaattattagctgtgtcggcgtg 839  Q
    |||||||||||| ||||||||||||||||||||||||    
T  22652006 tatgtgattttttcaaattattagctgtgtcggcgtg 22651970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 709 - 826
Target Start/End: Complemental strand, 14134823 - 14134706
Alignment:
Q  709 ataacctatgaagcacggtcacttctcggattaggtgtgtcccggtgacgtacacgtgtcgtgcccgacaccgacacttgtaattacactgaattatgtg 808  Q
    |||| ||||||| ||||| |||| |||| |||||| |||||| ||||||| ||||||||||||   ||||||||||  | ||||||||||||||||||||    
T  14134823 ataagctatgaaacacggacactcctcgaattaggcgtgtcctggtgacggacacgtgtcgtgtttgacaccgacatatataattacactgaattatgtg 14134724  T
Q  809 atttttacaaattattag 826  Q
    |||||  |||||||||||    
T  14134723 attttctcaaattattag 14134706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 716 - 827
Target Start/End: Complemental strand, 3025668 - 3025557
Alignment:
Q  716 atgaagcacggtcacttctcggattaggtgtgtcccggtgacgtacacgtgtcgtgcccgacaccgacacttgtaattacactgaattatgtgattttta 815  Q
    ||||||||||| |||| ||||||||||  ||||| | ||| |  |||||||||||| ||||||| ||||| | |||||||||||||||||||||||||      
T  3025668 atgaagcacggacactcctcggattagccgtgtcacagtgtcagacacgtgtcgtgtccgacactgacacctataattacactgaattatgtgattttct 3025569  T
Q  816 caaattattagc 827  Q
    ||||||||||||    
T  3025568 caaattattagc 3025557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 713 - 839
Target Start/End: Original strand, 4298829 - 4298951
Alignment:
Q  713 cctatgaagcacggtcacttctcggattaggtgtgtcccggtgacgtacacgtgtcgtgcccgacaccgacacttgtaattacactgaattatgtgattt 812  Q
    |||||||||||||  |||| ||| ||||||| |||||||| || || ||||||||| |  | |||||||||||||||||||||| | |||||||||||||    
T  4298829 cctatgaagcacga-cactcctcagattaggcgtgtcccg-tgtcgaacacgtgtcat--ctgacaccgacacttgtaattacattaaattatgtgattt 4298924  T
Q  813 ttacaaattattagctgtgtcggcgtg 839  Q
    || |||||||||| |||||||||||||    
T  4298925 tttcaaattattaactgtgtcggcgtg 4298951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 767 - 826
Target Start/End: Complemental strand, 4948718 - 4948659
Alignment:
Q  767 tcgtgcccgacaccgacacttgtaattacactgaattatgtgatttttacaaattattag 826  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  4948718 tcgtgtccgacaccgacacttgtaattacactgaattatgtgattttttcaaattattag 4948659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 774 - 839
Target Start/End: Original strand, 2572056 - 2572121
Alignment:
Q  774 cgacaccgacacttgtaattacactgaattatgtgatttttacaaattattagctgtgtcggcgtg 839  Q
    ||||||||||||||||||||||||| ||||||||||||||| ||||||||||| ||||||| ||||    
T  2572056 cgacaccgacacttgtaattacactaaattatgtgattttttcaaattattaggtgtgtcgacgtg 2572121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 774 - 839
Target Start/End: Original strand, 13436964 - 13437029
Alignment:
Q  774 cgacaccgacacttgtaattacactgaattatgtgatttttacaaattattagctgtgtcggcgtg 839  Q
    |||||||||||||||| |||||  ||||||||||||||||| ||||||||||||||||||||||||    
T  13436964 cgacaccgacacttgttattaccatgaattatgtgattttttcaaattattagctgtgtcggcgtg 13437029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 716 - 839
Target Start/End: Original strand, 926730 - 926853
Alignment:
Q  716 atgaagcacggtcacttctcggattaggtgtgtcccggtgacgtacacgtgtcgtgcccgacaccgacacttgtaattacactgaattatgtgattttta 815  Q
    ||||||||||| |||| ||||||| | |  |||||||||| || |||||||||| | ||||||||||||||| |||||||||||||  ||| ||||||      
T  926730 atgaagcacggacactcctcggataaagcatgtcccggtgtcggacacgtgtcgcgtccgacaccgacacttataattacactgaacaatgagattttct 926829  T
Q  816 caaattattagctgtgtcggcgtg 839  Q
    |||||||||||  |||| ||||||    
T  926830 caaattattaggagtgttggcgtg 926853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 713 - 835
Target Start/End: Complemental strand, 8343447 - 8343314
Alignment:
Q  713 cctatgaagcacggtcacttctcggattaggtgtgtcccggtgacgtacacgtgtcgtgcc-----------cgacaccgacacttgtaattacactgaa 801  Q
    |||||||||||| | ||||  |||||||||| ||||||||||| || |||||||||||| |           |||||| |||||||||||||||||| ||    
T  8343447 cctatgaagcacagacactcttcggattaggcgtgtcccggtgtcggacacgtgtcgtgtcggacacgtgtacgacactgacacttgtaattacactaaa 8343348  T
Q  802 ttatgtgatttttacaaattattagctgtgtcgg 835  Q
    ||||||||||||| ||||||||||||| ||||||    
T  8343347 ttatgtgattttttcaaattattagctatgtcgg 8343314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 716 - 826
Target Start/End: Original strand, 20679337 - 20679447
Alignment:
Q  716 atgaagcacggtcacttctcggattaggtgtgtcccggtgacgtacacgtgtcgtgcccgacaccgacacttgtaattacactgaattatgtgattttta 815  Q
    |||||||| || |||| ||||| | ||| ||||||||||| || |||||||| | | | ||||||||||||| ||||||||||||| |||||||||||      
T  20679337 atgaagcatggacactcctcggttaaggcgtgtcccggtgtcggacacgtgttgcgtctgacaccgacacttataattacactgaactatgtgattttct 20679436  T
Q  816 caaattattag 826  Q
    |||||||||||    
T  20679437 caaattattag 20679447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 773 - 839
Target Start/End: Original strand, 30077386 - 30077452
Alignment:
Q  773 ccgacaccgacacttgtaattacactgaattatgtgatttttacaaattattagctgtgtcggcgtg 839  Q
    ||||||| |||||||||||||||||||||||||||||| ||| |||||||||||||| || ||||||    
T  30077386 ccgacacggacacttgtaattacactgaattatgtgatgttttcaaattattagctgcgttggcgtg 30077452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 774 - 839
Target Start/End: Original strand, 30271291 - 30271356
Alignment:
Q  774 cgacaccgacacttgtaattacactgaattatgtgatttttacaaattattagctgtgtcggcgtg 839  Q
    |||||| | ||||||||||||||||| |||||||||||||| ||||| ||||||||||||||||||    
T  30271291 cgacactggcacttgtaattacactgcattatgtgattttttcaaatgattagctgtgtcggcgtg 30271356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 775 - 839
Target Start/End: Original strand, 22197743 - 22197807
Alignment:
Q  775 gacaccgacacttgtaattacactgaattatgtgatttttacaaattattagctgtgtcggcgtg 839  Q
    ||||| |||||||||||||||||| |||||||||| |||| ||||||||||||||||| ||||||    
T  22197743 gacactgacacttgtaattacactaaattatgtgaatttttcaaattattagctgtgttggcgtg 22197807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 780 - 836
Target Start/End: Original strand, 41831946 - 41832002
Alignment:
Q  780 cgacacttgtaattacactgaattatgtgatttttacaaattattagctgtgtcggc 836  Q
    ||||||||||| ||||||||||||||||||||||| |||||||||| ||||||||||    
T  41831946 cgacacttgtagttacactgaattatgtgattttttcaaattattaactgtgtcggc 41832002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 773 - 839
Target Start/End: Original strand, 13844595 - 13844661
Alignment:
Q  773 ccgacaccgacacttgtaattacactgaattatgtgatttttacaaattattagctgtgtcggcgtg 839  Q
    ||||||||||||| | |||||||||| ||||||||||||||  |||||||||||| |||||||||||    
T  13844595 ccgacaccgacacatataattacactcaattatgtgattttctcaaattattagcagtgtcggcgtg 13844661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 777 - 839
Target Start/End: Original strand, 25192350 - 25192412
Alignment:
Q  777 caccgacacttgtaattacactgaattatgtgatttttacaaattattagctgtgtcggcgtg 839  Q
    ||||||||||| |||||| |||||||||||| | |||| ||||||||||||||||||||||||    
T  25192350 caccgacacttataattatactgaattatgtcactttttcaaattattagctgtgtcggcgtg 25192412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 714 - 807
Target Start/End: Original strand, 24413499 - 24413592
Alignment:
Q  714 ctatgaagcacggtcacttctcggattaggtgtgtcccggtgacgtacacgtgtcgtgcccgacaccgacacttgtaattacactgaattatgt 807  Q
    ||||||||||||| |||||||||||||||  |||||||| ||  | |||||  ||||| ||||||| ||||||| ||||||| |||||||||||    
T  24413499 ctatgaagcacggacacttctcggattagacgtgtcccgctgttggacacgcatcgtgtccgacactgacacttataattaccctgaattatgt 24413592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 775 - 839
Target Start/End: Original strand, 4673426 - 4673490
Alignment:
Q  775 gacaccgacacttgtaattacactgaattatgtgatttttacaaattattagctgtgtcggcgtg 839  Q
    ||||| || |||||||||||||||||||| | |||||||| |||||||||| |||||||||||||    
T  4673426 gacactgatacttgtaattacactgaattttatgattttttcaaattattatctgtgtcggcgtg 4673490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 774 - 838
Target Start/End: Original strand, 11927086 - 11927150
Alignment:
Q  774 cgacaccgacacttgtaattacactgaattatgtgatttttacaaattattagctgtgtcggcgt 838  Q
    |||||||||||| | |||||||||||||||||||||||||  |||||||||| | ||||||||||    
T  11927086 cgacaccgacacatataattacactgaattatgtgattttatcaaattattaacagtgtcggcgt 11927150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 774 - 834
Target Start/End: Original strand, 17468508 - 17468568
Alignment:
Q  774 cgacaccgacacttgtaattacactgaattatgtgatttttacaaattattagctgtgtcg 834  Q
    ||||||| |||||||||||||||| | |||||||||||||||||||||||| | |||||||    
T  17468508 cgacaccaacacttgtaattacaccgcattatgtgatttttacaaattatttgttgtgtcg 17468568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 775 - 839
Target Start/End: Original strand, 29447111 - 29447175
Alignment:
Q  775 gacaccgacacttgtaattacactgaattatgtgatttttacaaattattagctgtgtcggcgtg 839  Q
    |||||||||||||||| ||||| ||||||||||||||||  ||||||||||| ||||||| ||||    
T  29447111 gacaccgacacttgtagttacattgaattatgtgattttctcaaattattagttgtgtcgacgtg 29447175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 767 - 839
Target Start/End: Original strand, 31236570 - 31236642
Alignment:
Q  767 tcgtgcccgacaccgacacttgtaattacactgaattatgtgatttttacaaattattagctgtgtcggcgtg 839  Q
    ||||| ||| ||||||||| | |||||||| ||||||||||||||||  |||||||||||| |||||||||||    
T  31236570 tcgtgtccgtcaccgacacatataattacattgaattatgtgattttctcaaattattagcagtgtcggcgtg 31236642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 714 - 827
Target Start/End: Original strand, 37283755 - 37283863
Alignment:
Q  714 ctatgaagcacggtcacttctcggattaggtgtgtcccggtgacgtacacgtgtcgtgcccgacaccgacacttgtaattacactgaattatgtgatttt 813  Q
    ||||||||||||| |||| ||||||||||  ||||||||||     |||||||||||| || |||||||||| |  ||||||||||||||||||||||||    
T  37283755 ctatgaagcacgggcactcctcggattagacgtgtcccggtag---acacgtgtcgtgtcccacaccgacacat--aattacactgaattatgtgatttt 37283849  T
Q  814 tacaaattattagc 827  Q
      || |||||||||    
T  37283850 ctcagattattagc 37283863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 774 - 833
Target Start/End: Complemental strand, 21465471 - 21465412
Alignment:
Q  774 cgacaccgacacttgtaattacactgaattatgtgatttttacaaattattagctgtgtc 833  Q
    ||||||| |||||||||||||||  ||||||| |||||||| ||||||||||||||||||    
T  21465471 cgacaccaacacttgtaattacatcgaattatatgattttttcaaattattagctgtgtc 21465412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 773 - 839
Target Start/End: Original strand, 18170481 - 18170547
Alignment:
Q  773 ccgacaccgacacttgtaattacactgaattatgtgatttttacaaattattagctgtgtcggcgtg 839  Q
    |||||||||||| ||||||||||| |||||||||| |||||| |||||| |||  ||||||||||||    
T  18170481 ccgacaccgacatttgtaattacattgaattatgtaattttttcaaatttttaattgtgtcggcgtg 18170547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 773 - 839
Target Start/End: Original strand, 18634049 - 18634115
Alignment:
Q  773 ccgacaccgacacttgtaattacactgaattatgtgatttttacaaattattagctgtgtcggcgtg 839  Q
    |||||||||||| ||||||||||| |||||||||| |||||| |||||| |||  ||||||||||||    
T  18634049 ccgacaccgacatttgtaattacattgaattatgtaattttttcaaatttttaattgtgtcggcgtg 18634115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 773 - 839
Target Start/End: Complemental strand, 34897145 - 34897079
Alignment:
Q  773 ccgacaccgacacttgtaattacactgaattatgtgatttttacaaattattagctgtgtcggcgtg 839  Q
    |||||| |||||| | |||||||||||||||||||||||||  |||||||||||| |||||| ||||    
T  34897145 ccgacatcgacacatataattacactgaattatgtgattttctcaaattattagcggtgtcgacgtg 34897079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 774 - 839
Target Start/End: Complemental strand, 11944724 - 11944659
Alignment:
Q  774 cgacaccgacacttgtaattacactgaattatgtgatttttacaaattattagctgtgtcggcgtg 839  Q
    |||||||||||| | |||||||||||| ||||||||||||  |||||||||| | |||||||||||    
T  11944724 cgacaccgacacatataattacactgagttatgtgattttatcaaattattaacagtgtcggcgtg 11944659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 774 - 839
Target Start/End: Complemental strand, 24669492 - 24669427
Alignment:
Q  774 cgacaccgacacttgtaattacactgaattatgtgatttttacaaattattagctgtgtcggcgtg 839  Q
    |||||||||||||||||||||||||||||||||| ||||   |||||||||| | ||||| |||||    
T  24669492 cgacaccgacacttgtaattacactgaattatgtaatttcctcaaattattaacggtgtcagcgtg 24669427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 782 - 839
Target Start/End: Original strand, 41838131 - 41838188
Alignment:
Q  782 acacttgtaattacactgaattatgtgatttttacaaattattagctgtgtcggcgtg 839  Q
    ||||||||| || ||||||||||||||||||||  |||||||||||||||||| ||||    
T  41838131 acacttgtagttgcactgaattatgtgatttttttaaattattagctgtgtcgacgtg 41838188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 733 - 813
Target Start/End: Original strand, 31580086 - 31580166
Alignment:
Q  733 ctcggattaggtgtgtcccggtgacgtacacgtgtcgtgcccgacaccgacacttgtaattacactgaattatgtgatttt 813  Q
    ||||||||||||||||  ||||| || ||| |||||| | |||||| |||||| | |||||||||| ||||||||||||||    
T  31580086 ctcggattaggtgtgtttcggtgtcgaacatgtgtcgcgtccgacatcgacacctataattacactcaattatgtgatttt 31580166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 760 - 839
Target Start/End: Original strand, 4786324 - 4786403
Alignment:
Q  760 acacgtgtcgtgcccgacaccgacacttgtaattacactgaattatgtgatttttacaaattattagctgtgtcggcgtg 839  Q
    |||| ||||||  ||||||||||||| | |||||||||||||||||||||||||   |||||||||   |||||||||||    
T  4786324 acacatgtcgtatccgacaccgacacatataattacactgaattatgtgattttcttaaattattaatggtgtcggcgtg 4786403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 714 - 839
Target Start/End: Complemental strand, 24858135 - 24858003
Alignment:
Q  714 ctatgaagcacggtcacttctcggattaggtgtgtcccggtgacgtacacgtgtcgtgcccgacac-----cgacacttgtaattacactgaattatgtg 808  Q
    |||||||||||   |||| ||| ||||||| ||||||||| |  | |||| ||||||| |||||||     ||||||||||| |||||||||||||||||    
T  24858135 ctatgaagcacaaacactcctctgattaggcgtgtcccggcgtgggacacatgtcgtgtccgacacgacaacgacacttgta-ttacactgaattatgtg 24858037  T
Q  809 at---ttttacaaattattagctgtgtcggcgtg 839  Q
    ||   |||| |||||||||| |||||||||||||    
T  24858036 atttttttttcaaattattaactgtgtcggcgtg 24858003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 764 - 839
Target Start/End: Complemental strand, 27101583 - 27101509
Alignment:
Q  764 gtgtcgtgcccgacaccgacacttgtaattacactgaattatgtgatttttacaaattattagctgtgtcggcgtg 839  Q
    ||||| || ||||||| ||||| | ||||| |||| ||||||||||||||| |||||||||||| |||||||||||    
T  27101583 gtgtcatgtccgacactgacacctataatt-cactaaattatgtgattttttcaaattattagcggtgtcggcgtg 27101509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 763 - 833
Target Start/End: Complemental strand, 31514943 - 31514872
Alignment:
Q  763 cgtgtcgtgcccgacaccgacacttgtaattacactgaattatgtgat-ttttacaaattattagctgtgtc 833  Q
    ||||||||| || ||||| ||||||||| |||| |||||||||||||| |||| ||||||||||| ||||||    
T  31514943 cgtgtcgtgtccaacaccaacacttgtagttacgctgaattatgtgatttttttcaaattattagttgtgtc 31514872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 714 - 825
Target Start/End: Original strand, 33405324 - 33405435
Alignment:
Q  714 ctatgaagcacggtcacttctcggattaggtgtgtcccggtgacgtacacgtgtcgtgcccgacaccgacacttgtaattacactgaattatgtgatttt 813  Q
    ||||| ||||||| ||||  | |||||||  |||||| |||| |  ||| |||||||| ||||||||||||| | |||||||||| ||||||||| ||||    
T  33405324 ctatggagcacggacactcattggattagccgtgtccaggtgtcagacatgtgtcgtgtccgacaccgacacatataattacactaaattatgtgttttt 33405423  T
Q  814 tacaaattatta 825  Q
      ||||||||||    
T  33405424 ctcaaattatta 33405435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 789 - 839
Target Start/End: Original strand, 24362217 - 24362267
Alignment:
Q  789 taattacactgaattatgtgatttttacaaattattagctgtgtcggcgtg 839  Q
    ||||||||||||||||||||||| |  |||||||||||| |||||||||||    
T  24362217 taattacactgaattatgtgattctctcaaattattagcggtgtcggcgtg 24362267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 789 - 839
Target Start/End: Original strand, 39954294 - 39954344
Alignment:
Q  789 taattacactgaattatgtgatttttacaaattattagctgtgtcggcgtg 839  Q
    |||||||||| ||||||||||||||  |||||||||||| |||||||||||    
T  39954294 taattacactaaattatgtgattttctcaaattattagcggtgtcggcgtg 39954344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 715 - 813
Target Start/End: Original strand, 43737752 - 43737850
Alignment:
Q  715 tatgaagcacggtcacttctcggattaggtgtgtcccggtgacgtacacgtgtcgtgcccgacaccgacacttgtaattacactgaattatgtgatttt 813  Q
    |||||||||||| |||| || |||| ||| || |||| ||| |  |||| ||||||| ||||||||||||| | ||||||||||| ||| |||||||||    
T  43737752 tatgaagcacggacactccttggataaggcgtatccccgtgtcagacacctgtcgtgtccgacaccgacacatataattacactgtattttgtgatttt 43737850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 760 - 805
Target Start/End: Original strand, 15023243 - 15023288
Alignment:
Q  760 acacgtgtcgtgcccgacaccgacacttgtaattacactgaattat 805  Q
    |||||||||||  |||||| ||||||||||||||||||||||||||    
T  15023243 acacgtgtcgtatccgacatcgacacttgtaattacactgaattat 15023288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 714 - 814
Target Start/End: Original strand, 3951476 - 3951576
Alignment:
Q  714 ctatgaagcacggtcacttctcggattaggtgtgtcccggtgacgtacacgtgtcgtgcccgacaccgacacttgtaattacactgaattatgtgatttt 813  Q
    |||||||||||||  ||| || |||||||| |||| || ||| |  |||||||||||| | ||||||||||| | ||| ||||||| ||| |||||||||    
T  3951476 ctatgaagcacggaaactccttggattaggcgtgttcccgtgtcagacacgtgtcgtgtctgacaccgacacatataagtacactgcattttgtgatttt 3951575  T
Q  814 t 814  Q
    |    
T  3951576 t 3951576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 776 - 832
Target Start/End: Complemental strand, 7442902 - 7442846
Alignment:
Q  776 acaccgacacttgtaattacactgaattatgtgatttttacaaattattagctgtgt 832  Q
    ||||| |||||||||||||||||||||||||| |||||   ||||||||||| ||||    
T  7442902 acaccaacacttgtaattacactgaattatgtaattttatgaaattattagcggtgt 7442846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 779 - 839
Target Start/End: Complemental strand, 27213601 - 27213541
Alignment:
Q  779 ccgacacttgtaattacactgaattatgtgatttttacaaattattagctgtgtcggcgtg 839  Q
    ||||||| | |||||||| ||||||||||||||||   ||||||||||| |||||||||||    
T  27213601 ccgacacatataattacagtgaattatgtgattttctgaaattattagcagtgtcggcgtg 27213541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 774 - 834
Target Start/End: Complemental strand, 28745557 - 28745497
Alignment:
Q  774 cgacaccgacacttgtaattacactgaattatgtgatttttacaaattattagctgtgtcg 834  Q
    ||||| ||||| ||||| ||||| |||||||||||| |||| |||||||||||| ||||||    
T  28745557 cgacatcgacatttgtagttacattgaattatgtgaatttttcaaattattagcagtgtcg 28745497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 719 - 839
Target Start/End: Original strand, 31109463 - 31109583
Alignment:
Q  719 aagcacggtcacttctcggattaggtgtgtcccggtgacgtacacgtgtcgtgcccgacaccgacacttgtaattacactgaattatgtgatttttacaa 818  Q
    |||||||| |||| ||||||||||| ||||||| ||| | ||||||   | || ||||||| ||||| | || ||| |||||||| | |||||||  |||    
T  31109463 aagcacggacactcctcggattaggcgtgtcccagtgtcatacacgacacatgtccgacactgacacatatagttagactgaattgtttgattttctcaa 31109562  T
Q  819 attattagctgtgtcggcgtg 839  Q
    ||||||| | |||||||||||    
T  31109563 attattaacggtgtcggcgtg 31109583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 714 - 825
Target Start/End: Complemental strand, 39820547 - 39820437
Alignment:
Q  714 ctatgaagcacggtcacttctcggattaggtgtgtcccggtgacgtacacgtgtc-gtgcccgacaccgacacttgtaattacactgaattatgtgattt 812  Q
    ||||||||||||| |||||||||||||||| ||||||| ||| || ||||| ||| ||| |||||| |||||| | | |||||||| |||||| | ||||    
T  39820547 ctatgaagcacggacacttctcggattaggcgtgtccc-gtgtcggacacgcgtcggtgtccgaca-cgacacctatgattacactaaattatatcattt 39820450  T
Q  813 ttacaaattatta 825  Q
    |  ||||||||||    
T  39820449 tctcaaattatta 39820437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 773 - 833
Target Start/End: Complemental strand, 44694851 - 44694791
Alignment:
Q  773 ccgacaccgacacttgtaattacactgaattatgtgatttttacaaattattagctgtgtc 833  Q
    ||||| || |||||||||||||| || |||||||||||||||  |||||||| ||||||||    
T  44694851 ccgacgccaacacttgtaattacgcttaattatgtgattttttaaaattatttgctgtgtc 44694791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 711 - 834
Target Start/End: Original strand, 949202 - 949324
Alignment:
Q  711 aacctatgaagcacggtcacttctcggattaggtgtgtcccggtgacgtacacgtgtcgtgcccgacaccgacacttgtaattacactgaattatgtgat 810  Q
    |||||||||||||||  || | ||| ||||||| ||||| ||||| || | | |||||||  ||| ||||||||| | ||| | |||| |||||| ||||    
T  949202 aacctatgaagcacgaacattcctcagattaggagtgtctcggtgtcggatatgtgtcgtatccggcaccgacacat-taactgcacttaattatttgat 949300  T
Q  811 ttttacaaattattagctgtgtcg 834  Q
    |||| |||||||||| ||||||||    
T  949301 tttttcaaattattaactgtgtcg 949324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 760 - 811
Target Start/End: Original strand, 9414861 - 9414912
Alignment:
Q  760 acacgtgtcgtgcccgacaccgacacttgtaattacactgaattatgtgatt 811  Q
    |||||||||||| | |||||| |||||| ||||| |||||||||||||||||    
T  9414861 acacgtgtcgtgtctgacaccaacacttataattgcactgaattatgtgatt 9414912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 775 - 834
Target Start/End: Original strand, 12606830 - 12606889
Alignment:
Q  775 gacaccgacacttgtaattacactgaattatgtgatttttacaaattattagctgtgtcg 834  Q
    ||||||||||| | |||||||| |||||||| |||||||  |||||||||||| ||||||    
T  12606830 gacaccgacacatataattacattgaattatatgattttctcaaattattagcagtgtcg 12606889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 774 - 813
Target Start/End: Original strand, 26902175 - 26902214
Alignment:
Q  774 cgacaccgacacttgtaattacactgaattatgtgatttt 813  Q
    |||||||||||| | |||||||||||||||||||||||||    
T  26902175 cgacaccgacacatataattacactgaattatgtgatttt 26902214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 712 - 755
Target Start/End: Complemental strand, 27213646 - 27213603
Alignment:
Q  712 acctatgaagcacggtcacttctcggattaggtgtgtcccggtg 755  Q
    ||||||||||||||| |||||||||||||||  |||||||||||    
T  27213646 acctatgaagcacggacacttctcggattagccgtgtcccggtg 27213603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 714 - 785
Target Start/End: Original strand, 34450961 - 34451032
Alignment:
Q  714 ctatgaagcacggtcacttctcggattaggtgtgtcccggtgacgtacacgtgtcgtgcccgacaccgacac 785  Q
    ||||||||||||| |||| || |||| ||| ||||||| ||| |  |||||||||||| |||||||||||||    
T  34450961 ctatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacac 34451032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #66
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 780 - 839
Target Start/End: Complemental strand, 44067569 - 44067510
Alignment:
Q  780 cgacacttgtaattacactgaattatgtgatttttacaaattattagctgtgtcggcgtg 839  Q
    |||||||| ||||||||||| ||||||| |||||  |||||||||| | |||||||||||    
T  44067569 cgacacttataattacactgtattatgtcattttctcaaattattatccgtgtcggcgtg 44067510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #67
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 789 - 835
Target Start/End: Complemental strand, 4611578 - 4611532
Alignment:
Q  789 taattacactgaattatgtgatttttacaaattattagctgtgtcgg 835  Q
    ||||||||||||||||||| |||||  |||||||||||| |||||||    
T  4611578 taattacactgaattatgttattttctcaaattattagcggtgtcgg 4611532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #68
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 776 - 838
Target Start/End: Complemental strand, 7658520 - 7658458
Alignment:
Q  776 acaccgacacttgtaattacactgaattatgtgatttttacaaattattagctgtgtcggcgt 838  Q
    |||||||||  | ||||||||||||||||||| |||||  |||||||||||  ||||||||||    
T  7658520 acaccgacaaatataattacactgaattatgtaattttctcaaattattagtggtgtcggcgt 7658458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #69
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 774 - 812
Target Start/End: Complemental strand, 8847315 - 8847277
Alignment:
Q  774 cgacaccgacacttgtaattacactgaattatgtgattt 812  Q
    |||||||||||| | ||||||||||||||||||||||||    
T  8847315 cgacaccgacacatataattacactgaattatgtgattt 8847277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #70
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 768 - 806
Target Start/End: Original strand, 30271249 - 30271287
Alignment:
Q  768 cgtgcccgacaccgacacttgtaattacactgaattatg 806  Q
    |||| ||||||||||||||||||||||||||| ||||||    
T  30271249 cgtgtccgacaccgacacttgtaattacactgcattatg 30271287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #71
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 789 - 839
Target Start/End: Complemental strand, 36934714 - 36934664
Alignment:
Q  789 taattacactgaattatgtgatttttacaaattattagctgtgtcggcgtg 839  Q
    |||||||| ||||||||||||||||| | |||||||||| |||||| ||||    
T  36934714 taattacaatgaattatgtgattttttcgaattattagcggtgtcgacgtg 36934664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #72
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 714 - 755
Target Start/End: Original strand, 16641909 - 16641950
Alignment:
Q  714 ctatgaagcacggtcacttctcggattaggtgtgtcccggtg 755  Q
    ||||||||||| | |||| |||||||||||||||||||||||    
T  16641909 ctatgaagcacagacactcctcggattaggtgtgtcccggtg 16641950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 74; Significance: 2e-33; HSPs: 79)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 711 - 839
Target Start/End: Original strand, 5409768 - 5409901
Alignment:
Q  711 aacctatgaagcacggtcacttctcggattaggtgtgtcccggtgacgtacacgtgtcgtg-----cccgacaccgacacttgtaattacactgaattat 805  Q
    |||||||||||||||| |||| ||||||||||| ||||||||||| || ||||||||||||     | |||||||||||||||||||| |||||||||||    
T  5409768 aacctatgaagcacggacactcctcggattaggcgtgtcccggtgtcggacacgtgtcgtgtccgacacgacaccgacacttgtaattgcactgaattat 5409867  T
Q  806 gtgatttttacaaattattagctgtgtcggcgtg 839  Q
    ||||||||| ||||||||||||||| || |||||    
T  5409868 gtgattttttcaaattattagctgtatcagcgtg 5409901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 714 - 827
Target Start/End: Complemental strand, 21880271 - 21880158
Alignment:
Q  714 ctatgaagcacggtcacttctcggattaggtgtgtcccggtgacgtacacgtgtcgtgcccgacaccgacacttgtaattacactgaattatgtgatttt 813  Q
    ||||||||||||| |||||||||||||||| |||||| |||| || ||| |||||||| ||||||||||||||||||||||||||||||||||| |||||    
T  21880271 ctatgaagcacggacacttctcggattaggcgtgtcctggtgtcggacatgtgtcgtgtccgacaccgacacttgtaattacactgaattatgtaatttt 21880172  T
Q  814 tacaaattattagc 827  Q
      ||||||||||||    
T  21880171 ctcaaattattagc 21880158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 707 - 833
Target Start/End: Complemental strand, 9778631 - 9778500
Alignment:
Q  707 tcataacctatgaagcacggtcacttctcggattaggtgtgtcccggtgacgtacacgtgtcgtg-----cccgacaccgacacttgtaattacactgaa 801  Q
    |||||||||||||||||||| |||| || |||||||| ||||||||||| || |||||||| |||     | ||||||||||||||||||||| ||||||    
T  9778631 tcataacctatgaagcacggacactccttggattaggcgtgtcccggtgtcggacacgtgttgtgtccgacacgacaccgacacttgtaattatactgaa 9778532  T
Q  802 ttatgtgatttttacaaattattagctgtgtc 833  Q
    ||||||||||||| |||||||| |||||||||    
T  9778531 ttatgtgattttttcaaattatcagctgtgtc 9778500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 713 - 839
Target Start/End: Complemental strand, 15680929 - 15680803
Alignment:
Q  713 cctatgaagcacggtcacttctcggattaggtgtgtcccggtgacgtacacgtgtcgtgcccgacaccgacacttgtaattacactgaattatgtgattt 812  Q
    |||||||||||||| |||| |||| |||||  ||||| ||||| || |||||||||||| ||||||||||||||| |||||||||| |||||||||||||    
T  15680929 cctatgaagcacggacactcctcgaattagacgtgtctcggtgtcggacacgtgtcgtgtccgacaccgacacttataattacactaaattatgtgattt 15680830  T
Q  813 ttacaaattattagctgtgtcggcgtg 839  Q
    ||   ||||||||||| ||||||||||    
T  15680829 tttttaattattagctatgtcggcgtg 15680803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 714 - 839
Target Start/End: Complemental strand, 24339772 - 24339636
Alignment:
Q  714 ctatgaagcacggtcacttctcggattaggtgtgtcccggtgacgtacacgtgtcgtgcccgacaccgacac-----------ttgtaattacactgaat 802  Q
    ||||||||||||| |||| ||||||||||| ||||||||||| || | |||||||||| |||||||||||||           |||||||||||||||||    
T  24339772 ctatgaagcacgggcactcctcggattaggcgtgtcccggtgtcggatacgtgtcgtgtccgacaccgacacgacaccgacacttgtaattacactgaat 24339673  T
Q  803 tatgtgatttttacaaattattagctgtgtcggcgtg 839  Q
    |||||||||||| ||||||||||||||||||||||||    
T  24339672 tatgtgattttttcaaattattagctgtgtcggcgtg 24339636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 714 - 839
Target Start/End: Complemental strand, 24105797 - 24105672
Alignment:
Q  714 ctatgaagcacggtcacttctcggattaggtgtgtcccggtgacgtacacgtgtcgtgcccgacaccgacacttgtaattacactgaattatgtgatttt 813  Q
    |||||||||||   |||| ||||| ||||| ||||||||||| || |||| ||| ||||||||| |||||||||||||||||||||||| |||  |||||    
T  24105797 ctatgaagcacaaacactcctcgggttaggcgtgtcccggtgtcggacacatgttgtgcccgactccgacacttgtaattacactgaatcatgcaatttt 24105698  T
Q  814 tacaaattattagctgtgtcggcgtg 839  Q
    | ||||||||||||||||||||||||    
T  24105697 ttcaaattattagctgtgtcggcgtg 24105672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 714 - 839
Target Start/End: Original strand, 43027404 - 43027534
Alignment:
Q  714 ctatgaagcacggtcacttctcggattaggtgtgtcccggtgacgtacacgtgtcgtg-----cccgacaccgacacttgtaattacactgaattatgtg 808  Q
    ||||||||||||| ||||  |||||||||| ||||||||||| || ||||||||||||     | ||||||||||||||||| |||||||| ||||||||    
T  43027404 ctatgaagcacggacactcatcggattaggcgtgtcccggtgtcggacacgtgtcgtgtctgacacgacaccgacacttgtatttacactgcattatgtg 43027503  T
Q  809 atttttacaaattattagctgtgtcggcgtg 839  Q
    |||||| |||||||||||||| |||| ||||    
T  43027504 attttttcaaattattagctgggtcgccgtg 43027534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 710 - 839
Target Start/End: Original strand, 7197233 - 7197362
Alignment:
Q  710 taacctatgaagcacggtcacttctcggattaggtgtgtcccggtgacgtacacgtgtcgtgcccgacaccgacacttgtaattacactgaattatgtga 809  Q
    |||| |||||||||||| || |||||||| || | || |||||||| || ||| |||| ||| |||||||||||||||||||||||| |||||||  |||    
T  7197233 taacatatgaagcacggacatttctcggaataagagtatcccggtgtcggacatgtgttgtgtccgacaccgacacttgtaattacattgaattaaatga 7197332  T
Q  810 tttttacaaattattagctgtgtcggcgtg 839  Q
    |||||  |||||||||||||||||||||||    
T  7197333 tttttttaaattattagctgtgtcggcgtg 7197362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 714 - 834
Target Start/End: Complemental strand, 598327 - 598207
Alignment:
Q  714 ctatgaagcacggtcacttctcggattaggtgtgtcccggtgacgtacacgtgtcgtgcccgacaccgacacttgtaattacactgaattatgtgatttt 813  Q
    ||||||||||||| |||||||||||||||| ||||||||||| || |||||||||||| | |||||||||||||  ||||||| | ||||| ||||||||    
T  598327 ctatgaagcacggacacttctcggattaggcgtgtcccggtgtcggacacgtgtcgtgtctgacaccgacacttacaattacatttaattacgtgatttt 598228  T
Q  814 tacaaattattagctgtgtcg 834  Q
       ||||||||||| ||||||    
T  598227 cttaaattattagcggtgtcg 598207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 767 - 839
Target Start/End: Complemental strand, 25481968 - 25481896
Alignment:
Q  767 tcgtgcccgacaccgacacttgtaattacactgaattatgtgatttttacaaattattagctgtgtcggcgtg 839  Q
    ||||| |||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  25481968 tcgtgtccgacaccaacacttgtaattacactgaattatgtgattttttcaaattattagctgtgtcggcgtg 25481896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 715 - 834
Target Start/End: Original strand, 32287404 - 32287523
Alignment:
Q  715 tatgaagcacggtcacttctcggattaggtgtgtcccggtgacgtacacgtgtcgtgcccgacaccgacacttgtaattacactgaattatgtgattttt 814  Q
    |||||||||||| |||| ||||||||||||||||||||||| || |||| |||| || ||||||||||||| | || || |||||||||||||||||||     
T  32287404 tatgaagcacggacactcctcggattaggtgtgtcccggtgtcggacacttgtcatgtccgacaccgacacatatacttgcactgaattatgtgattttc 32287503  T
Q  815 acaaattattagctgtgtcg 834  Q
     || ||||||||| ||||||    
T  32287504 tcagattattagcggtgtcg 32287523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 714 - 833
Target Start/End: Complemental strand, 21864927 - 21864806
Alignment:
Q  714 ctatgaagcacggtcacttctcggattaggtgtgtcccggtgacgtacacgtgtcgtgcccgacaccgacacttgtaattacactgaattatgtga--tt 811  Q
    ||||||||||| | |||| |||| |||||  ||||||||||| || |||||||||||| |||||| ||||||||||||||||||| |||||| |||  ||    
T  21864927 ctatgaagcacagacactcctcgaattagacgtgtcccggtgtcggacacgtgtcgtgtccgacagcgacacttgtaattacactaaattatatgatttt 21864828  T
Q  812 tttacaaattattagctgtgtc 833  Q
    ||| ||||||||||||||||||    
T  21864827 ttttcaaattattagctgtgtc 21864806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 719 - 838
Target Start/End: Complemental strand, 13770810 - 13770686
Alignment:
Q  719 aagcacggtcacttctcggattaggtgtgtcccggtgacgtacacgtgtcgtgcccgacac-----cgacacttgtaattacactgaattatgtgatttt 813  Q
    |||||||| ||||  |||||||||| |||| |||||| || |||||||| ||| |||||||     |||||||||||||||||||||||||||| |||||    
T  13770810 aagcacggacactcttcggattaggcgtgttccggtgtcggacacgtgttgtgtccgacacgacaacgacacttgtaattacactgaattatgtaatttt 13770711  T
Q  814 tacaaattattagctgtgtcggcgt 838  Q
    |  ||||||||||||||||||||||    
T  13770710 tttaaattattagctgtgtcggcgt 13770686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 736 - 835
Target Start/End: Complemental strand, 8234243 - 8234144
Alignment:
Q  736 ggattaggtgtgtcccggtgacgtacacgtgtcgtgcccgacaccgacacttgtaattacactgaattatgtgatttttacaaattattagctgtgtcgg 835  Q
    |||||||| ||||| ||||| || ||| |||||||| ||||||||| ||||||||| ||||||||||||||| |||||| ||||||||||| ||||||||    
T  8234243 ggattaggcgtgtctcggtgtcggacatgtgtcgtgtccgacaccggcacttgtaactacactgaattatgttattttttcaaattattagttgtgtcgg 8234144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 715 - 835
Target Start/End: Complemental strand, 20549909 - 20549789
Alignment:
Q  715 tatgaagcacggtcacttctcggattaggtgtgtcccggtgacgtacacgtgtcgtgcccgacaccgacacttgtaattacactgaattatgtgattttt 814  Q
    |||||||||||| |||| ||||||||||| ||||| |  || || ||| |||| ||| ||||||||||||| | |||||||||||||||| ||||||||     
T  20549909 tatgaagcacgggcactcctcggattaggcgtgtctcattgtcggacatgtgttgtgtccgacaccgacacatataattacactgaattacgtgattttc 20549810  T
Q  815 acaaattattagctgtgtcgg 835  Q
     |||||||||||| |||||||    
T  20549809 tcaaattattagcggtgtcgg 20549789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 774 - 835
Target Start/End: Complemental strand, 3991383 - 3991322
Alignment:
Q  774 cgacaccgacacttgtaattacactgaattatgtgatttttacaaattattagctgtgtcgg 835  Q
    ||||||||||||||||||||| ||||||||||||||||||| ||||||||||| ||||||||    
T  3991383 cgacaccgacacttgtaattatactgaattatgtgattttttcaaattattagttgtgtcgg 3991322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 775 - 836
Target Start/End: Complemental strand, 7438764 - 7438703
Alignment:
Q  775 gacaccgacacttgtaattacactgaattatgtgatttttacaaattattagctgtgtcggc 836  Q
    |||||||||||||||||||||| ||||||||||||||||| |||||||||| ||||||||||    
T  7438764 gacaccgacacttgtaattacattgaattatgtgattttttcaaattattaactgtgtcggc 7438703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 774 - 839
Target Start/End: Original strand, 18215186 - 18215251
Alignment:
Q  774 cgacaccgacacttgtaattacactgaattatgtgatttttacaaattattagctgtgtcggcgtg 839  Q
    |||||||||||||||||| ||||||| |||||||||||||| |||||||||||||| |||||||||    
T  18215186 cgacaccgacacttgtaactacactgcattatgtgattttttcaaattattagctgcgtcggcgtg 18215251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 714 - 832
Target Start/End: Original strand, 32093954 - 32094079
Alignment:
Q  714 ctatgaagcacggtcacttctcggattaggtgtgt-cccggtgacgtacacgtgtcgtg-----cccgacaccgacacttgtaattacactgaattatgt 807  Q
    ||||||||||||  |||| ||||||||||| |||| ||||||| || ||||||||||||     | ||||||||||| ||||||||||||||||||||||    
T  32093954 ctatgaagcacgaacactcctcggattaggcgtgtccccggtgtcggacacgtgtcgtgtccgacacgacaccgacatttgtaattacactgaattatgt 32094053  T
Q  808 ga-tttttacaaattattagctgtgt 832  Q
    || ||||| ||||||||||| |||||    
T  32094054 gatttttttcaaattattagttgtgt 32094079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 775 - 835
Target Start/End: Original strand, 11061077 - 11061137
Alignment:
Q  775 gacaccgacacttgtaattacactgaattatgtgatttttacaaattattagctgtgtcgg 835  Q
    |||||||||||||||||||| ||| ||||||||||||||| ||||||||||||||||||||    
T  11061077 gacaccgacacttgtaattatactaaattatgtgattttttcaaattattagctgtgtcgg 11061137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 713 - 827
Target Start/End: Complemental strand, 1401143 - 1401031
Alignment:
Q  713 cctatgaagcacggtcacttctcggattaggtgtgtcccggtgacgtacacgtgtcgtgcccgacaccgacacttgtaattacactgaattatgtgattt 812  Q
    ||||||||||| || |||| ||| |||||||||||||||| || || |||  ||||||| | |||||||| |||| ||||||||||||||||||||| ||    
T  1401143 cctatgaagcatggacactcctcagattaggtgtgtcccgatgtcggaca--tgtcgtgtcggacaccgatacttataattacactgaattatgtgagtt 1401046  T
Q  813 ttacaaattattagc 827  Q
    |  ||||||||||||    
T  1401045 tctcaaattattagc 1401031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 778 - 829
Target Start/End: Original strand, 26033465 - 26033516
Alignment:
Q  778 accgacacttgtaattacactgaattatgtgatttttacaaattattagctg 829  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  26033465 accgacacttgtaattacactgaattatgtgattttttcaaattattagctg 26033516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 712 - 839
Target Start/End: Complemental strand, 33994333 - 33994206
Alignment:
Q  712 acctatgaagcacggtcacttctcggattaggtgtgtcccggtgacgtacacgtgtcgtgcccgacaccgacacttgtaattacactgaattatgtgatt 811  Q
    ||||||||| ||||  |||| || |||||||| ||||| |||||  | ||| |||||||| | ||||||||||||||||||| |||||||||||||||      
T  33994333 acctatgaaacacgaacactccttggattaggcgtgtctcggtgttggacatgtgtcgtgtctgacaccgacacttgtaattgcactgaattatgtgacc 33994234  T
Q  812 tttacaaattattagctgtgtcggcgtg 839  Q
    ||| ||||||| ||| || |||||||||    
T  33994233 ttttcaaattagtagttgcgtcggcgtg 33994206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 773 - 839
Target Start/End: Complemental strand, 28155630 - 28155564
Alignment:
Q  773 ccgacaccgacacttgtaattacactgaattatgtgatttttacaaattattagctgtgtcggcgtg 839  Q
    ||||||||||||||||||||||||| ||||||||| |||||  |||||||||||| |||||||||||    
T  28155630 ccgacaccgacacttgtaattacaccgaattatgtaattttctcaaattattagcggtgtcggcgtg 28155564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 774 - 835
Target Start/End: Original strand, 9408334 - 9408395
Alignment:
Q  774 cgacaccgacacttgtaattacactgaattatgtgatttttacaaattattagctgtgtcgg 835  Q
    ||||||||||||||||||||||||| ||||||||||||||| ||||||||||  ||||||||    
T  9408334 cgacaccgacacttgtaattacactaaattatgtgattttttcaaattattaattgtgtcgg 9408395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 774 - 839
Target Start/End: Complemental strand, 27945100 - 27945035
Alignment:
Q  774 cgacaccgacacttgtaattacactgaattatgtgatttttacaaattattagctgtgtcggcgtg 839  Q
    |||||||||||||||||||||||||||||||||| |||||  |||||||||||  |||||||||||    
T  27945100 cgacaccgacacttgtaattacactgaattatgtaattttctcaaattattagtggtgtcggcgtg 27945035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 718 - 839
Target Start/End: Original strand, 40287306 - 40287421
Alignment:
Q  718 gaagcacggtcacttctcggattaggtgtgtcccggtgacgtacacgtgtcgtgcccgacaccgacacttgtaattacactgaattatgtgatttttaca 817  Q
    ||||||||| |||| |||||||||||  |||||||||| || ||| |||||     ||| |||||||||||||||||||||||| ||| |||||||| ||    
T  40287306 gaagcacggacactcctcggattaggcatgtcccggtgtcggacatgtgtc-----cgataccgacacttgtaattacactgaa-tatatgattttttca 40287399  T
Q  818 aattattagctgtgtcggcgtg 839  Q
    ||||||| | ||||||||||||    
T  40287400 aattattcgttgtgtcggcgtg 40287421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 774 - 838
Target Start/End: Original strand, 11272586 - 11272652
Alignment:
Q  774 cgacaccgacacttgtaattacactgaat--tatgtgatttttacaaattattagctgtgtcggcgt 838  Q
    |||||||||||||||||||||||||||||  |||||||||||| |||||||| || |||||||||||    
T  11272586 cgacaccgacacttgtaattacactgaattatatgtgattttttcaaattatcagttgtgtcggcgt 11272652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 766 - 833
Target Start/End: Complemental strand, 19213870 - 19213803
Alignment:
Q  766 gtcgtgcccgacaccgacacttgtaattacactgaattatgtgatttttacaaattattagctgtgtc 833  Q
    |||||| |||||||||||||||||| |||||||| ||||||||||||||  ||||||||||| |||||    
T  19213870 gtcgtgtccgacaccgacacttgtatttacactgcattatgtgattttttaaaattattagcagtgtc 19213803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 774 - 833
Target Start/End: Complemental strand, 19992060 - 19992001
Alignment:
Q  774 cgacaccgacacttgtaattacactgaattatgtgatttttacaaattattagctgtgtc 833  Q
    |||||||||||||| ||||||||||||| |||||||||||  ||||||||||||||||||    
T  19992060 cgacaccgacacttataattacactgaaatatgtgattttctcaaattattagctgtgtc 19992001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 774 - 839
Target Start/End: Complemental strand, 21560562 - 21560492
Alignment:
Q  774 cgacaccgacacttgtaattacactgaattatgtgatttt-----tacaaattattagctgtgtcggcgtg 839  Q
    ||||||||||||||||||||||||||||||||||||||||     | ||||||||||||||| ||||||||    
T  21560562 cgacaccgacacttgtaattacactgaattatgtgattttttttcttcaaattattagctgtatcggcgtg 21560492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 733 - 839
Target Start/End: Complemental strand, 26733404 - 26733298
Alignment:
Q  733 ctcggattaggtgtgtcccggtgacgtacacgtgtcgtgcccgacaccgacacttgtaattacactgaattatgtgatttttacaaattattagctgtgt 832  Q
    ||||||||||| |||| || ||  || ||| | |||||| ||||||||||||| | |||||| ||||||||||||||||||  |||||||||||| ||||    
T  26733404 ctcggattaggcgtgttcccgtatcggacatgcgtcgtgtccgacaccgacacatttaattagactgaattatgtgattttgtcaaattattagcggtgt 26733305  T
Q  833 cggcgtg 839  Q
    || ||||    
T  26733304 cgacgtg 26733298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 774 - 839
Target Start/End: Complemental strand, 25822714 - 25822649
Alignment:
Q  774 cgacaccgacacttgtaattacactgaattatgtgatttttacaaattattagctgtgtcggcgtg 839  Q
    |||||||||||||||||||||||||||||| ||   ||||| ||||||||||| ||||||||||||    
T  25822714 cgacaccgacacttgtaattacactgaattgtgattttttttcaaattattagttgtgtcggcgtg 25822649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 774 - 839
Target Start/End: Complemental strand, 35862023 - 35861958
Alignment:
Q  774 cgacaccgacacttgtaattacactgaattatgtgatttttacaaattattagctgtgtcggcgtg 839  Q
    |||||| |||||||  ||||||| ||||||||||||||||| ||||||||||| ||||||||||||    
T  35862023 cgacacagacacttacaattacattgaattatgtgattttttcaaattattagttgtgtcggcgtg 35861958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 775 - 839
Target Start/End: Original strand, 11665441 - 11665505
Alignment:
Q  775 gacaccgacacttgtaattacactgaattatgtgatttttacaaattattagctgtgtcggcgtg 839  Q
    |||| |||||||| |||||| ||||||||||||||||||| ||||||||||| |||||| |||||    
T  11665441 gacatcgacacttataattagactgaattatgtgattttttcaaattattagttgtgtcagcgtg 11665505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 774 - 814
Target Start/End: Complemental strand, 18039058 - 18039018
Alignment:
Q  774 cgacaccgacacttgtaattacactgaattatgtgattttt 814  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  18039058 cgacaccgacacttgtaattacactgaattatgtgattttt 18039018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 728 - 838
Target Start/End: Complemental strand, 5835352 - 5835242
Alignment:
Q  728 cacttctcggattaggtgtgtcccggtgacgtacacgtgtcgtgcccgacaccgacacttgtaattacactgaattatgtgatttttacaaattattagc 827  Q
    |||||||||||||| | ||||||||||  |  |||| |||| || | ||||||||||| | ||||||||||||||||||| |||||  |||| ||||||     
T  5835352 cacttctcggattaagcgtgtcccggtatcagacacatgtcatgtctgacaccgacacatataattacactgaattatgttattttctcaaactattagt 5835253  T
Q  828 tgtgtcggcgt 838  Q
     ||||||||||    
T  5835252 ggtgtcggcgt 5835242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 789 - 839
Target Start/End: Original strand, 29787384 - 29787434
Alignment:
Q  789 taattacactgaattatgtgatttttacaaattattagctgtgtcggcgtg 839  Q
    |||||||||||||||||||||||||  |||||||||||| |||||||||||    
T  29787384 taattacactgaattatgtgattttctcaaattattagcggtgtcggcgtg 29787434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 714 - 838
Target Start/End: Original strand, 18212973 - 18213098
Alignment:
Q  714 ctatgaagcacggtcacttctcggattaggtgtgtcccggtgacgtacacgtgtcgtgcccgacaccgacacttgtaattacactgaattatgtgatttt 813  Q
    ||||||||||| | |||| ||||||| ||| ||||||| ||| |  | | | |||||| ||||||||||||| | |||||||||| ||||||||||||||    
T  18212973 ctatgaagcacagacactcctcggataaggcgtgtccccgtgtcagaaaggggtcgtgtccgacaccgacacatataattacactaaattatgtgatttt 18213072  T
Q  814 -tacaaattattagctgtgtcggcgt 838  Q
     || |||  ||||| |||||||||||    
T  18213073 ctaaaaaaaattagttgtgtcggcgt 18213098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 734 - 835
Target Start/End: Original strand, 27093373 - 27093474
Alignment:
Q  734 tcggattaggtgtgtcccggtgacgtacacgtgtcgtgcccgacaccgacacttgtaattacactgaattatgtgatttttacaaattattagctgtgtc 833  Q
    |||||||||||||||||  ||| || |||| ||||||| |  |||||||| | | |||||||||| ||||||||||||||   ||||||||||| |||||    
T  27093373 tcggattaggtgtgtcctagtgtcggacacatgtcgtgtctaacaccgacgcatataattacactaaattatgtgattttcttaaattattagcggtgtc 27093472  T
Q  834 gg 835  Q
    ||    
T  27093473 gg 27093474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 734 - 835
Target Start/End: Complemental strand, 27184928 - 27184827
Alignment:
Q  734 tcggattaggtgtgtcccggtgacgtacacgtgtcgtgcccgacaccgacacttgtaattacactgaattatgtgatttttacaaattattagctgtgtc 833  Q
    |||||||||||||||||  ||| || |||| ||||||| |  |||||||| | | |||||||||| ||||||||||||||   ||||||||||| |||||    
T  27184928 tcggattaggtgtgtcctagtgtcggacacatgtcgtgtctaacaccgacgcatataattacactaaattatgtgattttcttaaattattagcggtgtc 27184829  T
Q  834 gg 835  Q
    ||    
T  27184828 gg 27184827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 790 - 839
Target Start/End: Complemental strand, 32308163 - 32308114
Alignment:
Q  790 aattacactgaattatgtgatttttacaaattattagctgtgtcggcgtg 839  Q
    ||||||||||||||||||||||||  |||||||||||| |||||||||||    
T  32308163 aattacactgaattatgtgattttctcaaattattagcggtgtcggcgtg 32308114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 774 - 814
Target Start/End: Complemental strand, 2334309 - 2334269
Alignment:
Q  774 cgacaccgacacttgtaattacactgaattatgtgattttt 814  Q
    ||||||||||||||||||||||||| |||||||||||||||    
T  2334309 cgacaccgacacttgtaattacactaaattatgtgattttt 2334269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 774 - 826
Target Start/End: Complemental strand, 7058485 - 7058433
Alignment:
Q  774 cgacaccgacacttgtaattacactgaattatgtgatttttacaaattattag 826  Q
    ||||||| |||||||||||||||||||||||  |||||||| |||||||||||    
T  7058485 cgacaccaacacttgtaattacactgaattacatgattttttcaaattattag 7058433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 775 - 839
Target Start/End: Complemental strand, 19206108 - 19206044
Alignment:
Q  775 gacaccgacacttgtaattacactgaattatgtgatttttacaaattattagctgtgtcggcgtg 839  Q
    ||||||||||| | |||||| | ||||||||||||||||  |||||||||||| |||||||||||    
T  19206108 gacaccgacacatataattataatgaattatgtgattttctcaaattattagcggtgtcggcgtg 19206044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 715 - 839
Target Start/End: Complemental strand, 22484143 - 22484019
Alignment:
Q  715 tatgaagcacggtcacttctcggattaggtgtgtcccggtgacgtacacgtgtcgtgcccgacaccgacacttgtaattacactgaattatgtgattttt 814  Q
    |||||||||||| |||||||||||| ||   |||| || || || ||| ||||| || | ||||||||||| | |||||| |||||||||||  |||||     
T  22484143 tatgaagcacggacacttctcggatcagacatgtctcgatgtcggacatgtgtcatgtctgacaccgacacatataattatactgaattatgcaattttc 22484044  T
Q  815 acaaattattagctgtgtcggcgtg 839  Q
      ||||||||||| |||||||||||    
T  22484043 taaaattattagcggtgtcggcgtg 22484019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 775 - 826
Target Start/End: Complemental strand, 13300468 - 13300417
Alignment:
Q  775 gacaccgacacttgtaattacactgaattatgtgatttttacaaattattag 826  Q
    |||||||| ||| |||||||||||||||||| |||||||| |||||||||||    
T  13300468 gacaccgagactggtaattacactgaattatatgattttttcaaattattag 13300417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 787 - 838
Target Start/End: Complemental strand, 23191942 - 23191891
Alignment:
Q  787 tgtaattacactgaattatgtgatttttacaaattattagctgtgtcggcgt 838  Q
    ||||||||||||||| |||||||||||  |||||||||||| ||||||||||    
T  23191942 tgtaattacactgaaatatgtgattttctcaaattattagcggtgtcggcgt 23191891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 714 - 833
Target Start/End: Original strand, 42720830 - 42720949
Alignment:
Q  714 ctatgaagcacggtcacttctcggattaggtgtgtcccggtgacgtacacgtgtcgtgcccgacaccgacacttgtaattacactgaattatgtgatttt 813  Q
    |||||||||||   ||||| ||| |||||  |||| ||||||  |||||| ||| ||| | ||||| ||||| | |||||||| | ||||||||||||||    
T  42720830 ctatgaagcacaaacacttatcgaattagacgtgttccggtgttgtacacatgttgtgtcagacactgacacatataattacatttaattatgtgatttt 42720929  T
Q  814 tacaaattattagctgtgtc 833  Q
    | |||||||||||| |||||    
T  42720930 ttcaaattattagcggtgtc 42720949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 714 - 839
Target Start/End: Complemental strand, 1433578 - 1433448
Alignment:
Q  714 ctatgaagcacggtcacttctcggattaggtgtgtcccggtgacgtacacgtgtcgtg-----cccgacaccgacacttgtaattacactgaattatgtg 808  Q
    ||||||||||||| |||| ||||||||||  |||||| |||| || |||| |||| ||     | |||||||||||| | |||||||||  ||| |||||    
T  1433578 ctatgaagcacggacactcctcggattagacgtgtcctggtgtcggacacatgtcttgtccgacacgacaccgacacatataattacaccaaatgatgtg 1433479  T
Q  809 atttttacaaattattagctgtgtcggcgtg 839  Q
    |||||  |||||||||| | |||||||||||    
T  1433478 attttctcaaattattaacggtgtcggcgtg 1433448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 784 - 834
Target Start/End: Complemental strand, 11831481 - 11831431
Alignment:
Q  784 acttgtaattacactgaattatgtgatttttacaaattattagctgtgtcg 834  Q
    ||||||||||||||| |||||| |||||||| ||||||||||| |||||||    
T  11831481 acttgtaattacactaaattatatgattttttcaaattattagttgtgtcg 11831431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 774 - 839
Target Start/End: Original strand, 22602710 - 22602775
Alignment:
Q  774 cgacaccgacacttgtaattacactgaattatgtgatttttacaaattattagctgtgtcggcgtg 839  Q
    |||||||||||| | |||||||||||||||||||||||||  ||||| |||  | |||||||||||    
T  22602710 cgacaccgacacatataattacactgaattatgtgattttctcaaataatttacggtgtcggcgtg 22602775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 790 - 839
Target Start/End: Complemental strand, 30731080 - 30731031
Alignment:
Q  790 aattacactgaattatgtgatttttacaaattattagctgtgtcggcgtg 839  Q
    ||||||||||||||||||||||||  ||||||||| || |||||||||||    
T  30731080 aattacactgaattatgtgattttctcaaattattcgcggtgtcggcgtg 30731031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 775 - 819
Target Start/End: Complemental strand, 48438604 - 48438560
Alignment:
Q  775 gacaccgacacttgtaattacactgaattatgtgatttttacaaa 819  Q
    ||||||||||| |||||||||| ||||||||||||||||| ||||    
T  48438604 gacaccgacacgtgtaattacattgaattatgtgattttttcaaa 48438560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 768 - 827
Target Start/End: Complemental strand, 3721158 - 3721099
Alignment:
Q  768 cgtgcccgacaccgacacttgtaattacactgaattatgtgatttttacaaattattagc 827  Q
    |||| ||||||||||||| | |||||| ||| ||||||||||||||  ||||||||||||    
T  3721158 cgtgtccgacaccgacacatataattatactaaattatgtgattttctcaaattattagc 3721099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 764 - 823
Target Start/End: Complemental strand, 9483003 - 9482944
Alignment:
Q  764 gtgtcgtgcccgacaccgacacttgtaattacactgaattatgtgatttttacaaattat 823  Q
    |||||| | ||||||||||||| | ||||||||||||||| |||||||||  ||||||||    
T  9483003 gtgtcgcgtccgacaccgacacatataattacactgaattgtgtgattttctcaaattat 9482944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 774 - 825
Target Start/End: Original strand, 11890919 - 11890970
Alignment:
Q  774 cgacaccgacacttgtaattacactgaattatgtgatttttacaaattatta 825  Q
    ||||||| |||||  ||||||||||||||||| |||||||| ||||||||||    
T  11890919 cgacacctacactcataattacactgaattatatgattttttcaaattatta 11890970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 783 - 814
Target Start/End: Original strand, 13557750 - 13557781
Alignment:
Q  783 cacttgtaattacactgaattatgtgattttt 814  Q
    ||||||||||||||||||||||||||||||||    
T  13557750 cacttgtaattacactgaattatgtgattttt 13557781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 714 - 777
Target Start/End: Complemental strand, 17852119 - 17852056
Alignment:
Q  714 ctatgaagcacggtcacttctcggattaggtgtgtcccggtgacgtacacgtgtcgtgcccgac 777  Q
    ||||||||||||| |||| |||| |||||||||||| ||||| || ||||||||| || |||||    
T  17852119 ctatgaagcacggacactcctcgaattaggtgtgtctcggtgtcggacacgtgtcatgtccgac 17852056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 768 - 839
Target Start/End: Complemental strand, 21826338 - 21826267
Alignment:
Q  768 cgtgcccgacaccgacacttgtaattacactgaattatgtgatttttacaaattattagctgtgtcggcgtg 839  Q
    |||| ||||||||||||| | | |||| ||||| |||||||||||||  ||||||||||  |||||||||||    
T  21826338 cgtgtccgacaccgacacatattattagactgagttatgtgatttttttaaattattagtcgtgtcggcgtg 21826267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 767 - 818
Target Start/End: Complemental strand, 25956511 - 25956460
Alignment:
Q  767 tcgtgcccgacaccgacacttgtaattacactgaattatgtgatttttacaa 818  Q
    ||||| ||||||||||||||||| |||||| |||||||||| ||||| ||||    
T  25956511 tcgtgtccgacaccgacacttgtgattacattgaattatgtcattttcacaa 25956460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 776 - 839
Target Start/End: Complemental strand, 41020553 - 41020490
Alignment:
Q  776 acaccgacacttgtaattacactgaattatgtgatttttacaaattattagctgtgtcggcgtg 839  Q
    |||||||| | | |||||||||| |||||||||||||||  |||||||||| ||||||| ||||    
T  41020553 acaccgacgcatataattacactaaattatgtgatttttgtaaattattagttgtgtcgacgtg 41020490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 780 - 839
Target Start/End: Complemental strand, 43250046 - 43249987
Alignment:
Q  780 cgacacttgtaattacactgaattatgtgatttttacaaattattagctgtgtcggcgtg 839  Q
    |||||||| ||||||||||| ||||||| |||||  |||||||||| | |||||||||||    
T  43250046 cgacacttataattacactgtattatgtcattttctcaaattattatccgtgtcggcgtg 43249987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 789 - 827
Target Start/End: Complemental strand, 2424658 - 2424620
Alignment:
Q  789 taattacactgaattatgtgatttttacaaattattagc 827  Q
    |||||||||||||||||||||||||  ||||||||||||    
T  2424658 taattacactgaattatgtgattttctcaaattattagc 2424620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 774 - 836
Target Start/End: Complemental strand, 5548735 - 5548673
Alignment:
Q  774 cgacaccgacacttgtaattacactgaattatgtgatttttacaaattattagctgtgtcggc 836  Q
    |||||| ||||| | ||||||||||||||||| |||||||  |||||||| ||| ||||||||    
T  5548735 cgacactgacacatataattacactgaattatttgattttctcaaattatcagcggtgtcggc 5548673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 789 - 839
Target Start/End: Complemental strand, 22868086 - 22868036
Alignment:
Q  789 taattacactgaattatgtgatttttacaaattattagctgtgtcggcgtg 839  Q
    |||||||||||||||||||||||||  || ||||||||  |||||||||||    
T  22868086 taattacactgaattatgtgattttctcatattattagtggtgtcggcgtg 22868036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 774 - 824
Target Start/End: Original strand, 27229311 - 27229360
Alignment:
Q  774 cgacaccgacacttgtaattacactgaattatgtgatttttacaaattatt 824  Q
    ||||||||| |||| |||||||||| |||||||||| ||||||||||||||    
T  27229311 cgacaccgatacttataattacactaaattatgtga-ttttacaaattatt 27229360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 714 - 752
Target Start/End: Original strand, 29812598 - 29812636
Alignment:
Q  714 ctatgaagcacggtcacttctcggattaggtgtgtcccg 752  Q
    ||||||||||||| |||||||||||||||| ||||||||    
T  29812598 ctatgaagcacggacacttctcggattaggcgtgtcccg 29812636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 767 - 813
Target Start/End: Complemental strand, 39138510 - 39138464
Alignment:
Q  767 tcgtgcccgacaccgacacttgtaattacactgaattatgtgatttt 813  Q
    ||||| ||||||||||||  | |||||||||||||||||||||||||    
T  39138510 tcgtgtccgacaccgacatatataattacactgaattatgtgatttt 39138464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 707 - 824
Target Start/End: Original strand, 41229230 - 41229348
Alignment:
Q  707 tcataacctatgaagcacggtcacttctcggattaggtgtgtcccggtgacgtacacgtg-tcgtgcccgacaccgacacttgtaattacactgaattat 805  Q
    ||||| |||||||||||||| ||||||||  |||||| ||||| | |||||| ||||| | | ||| ||||||||||| | | | |||| || |||||||    
T  41229230 tcatagcctatgaagcacggacacttctcatattaggcgtgtcgcagtgacggacacgcgttggtgtccgacaccgacgcctatgattatacagaattat 41229329  T
Q  806 gtgatttttacaaattatt 824  Q
    || |||||  |||||||||    
T  41229330 gtcattttctcaaattatt 41229348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 775 - 812
Target Start/End: Complemental strand, 640171 - 640134
Alignment:
Q  775 gacaccgacacttgtaattacactgaattatgtgattt 812  Q
    ||||||||||| | ||||||||||||||||||||||||    
T  640171 gacaccgacacatataattacactgaattatgtgattt 640134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #72
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 774 - 819
Target Start/End: Complemental strand, 1885632 - 1885587
Alignment:
Q  774 cgacaccgacacttgtaattacactgaattatgtgatttttacaaa 819  Q
    |||||||||||||||| |||||| |||||||||| |||||| ||||    
T  1885632 cgacaccgacacttgtgattacattgaattatgtcattttttcaaa 1885587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #73
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 774 - 839
Target Start/End: Original strand, 6630912 - 6630977
Alignment:
Q  774 cgacaccgacacttgtaattacactgaattatgtgatttttacaaattattagctgtgtcggcgtg 839  Q
    ||||| |||||| | |||||||||||||||| |||| |||  |||||||||||  |||||||||||    
T  6630912 cgacatcgacacatataattacactgaattaagtgactttctcaaattattagtggtgtcggcgtg 6630977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #74
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 774 - 827
Target Start/End: Original strand, 7328691 - 7328744
Alignment:
Q  774 cgacaccgacacttgtaattacactgaattatgtgatttttacaaattattagc 827  Q
    |||||||||||| | |||||||||| |||||||| |||||  ||||||||||||    
T  7328691 cgacaccgacacatataattacactaaattatgttattttctcaaattattagc 7328744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #75
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 774 - 839
Target Start/End: Complemental strand, 10042996 - 10042931
Alignment:
Q  774 cgacaccgacacttgtaattacactgaattatgtgatttttacaaattattagctgtgtcggcgtg 839  Q
    |||||| ||||||| ||||||| || |||||||||| |||  |||||||||||  |||||||||||    
T  10042996 cgacactgacacttataattacgctaaattatgtgaatttatcaaattattagtggtgtcggcgtg 10042931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #76
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 776 - 825
Target Start/End: Complemental strand, 15902879 - 15902830
Alignment:
Q  776 acaccgacacttgtaattacactgaattatgtgatttttacaaattatta 825  Q
    |||||||||| | |||||||||| ||||||||||||||  ||||||||||    
T  15902879 acaccgacacatataattacactaaattatgtgattttatcaaattatta 15902830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #77
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 774 - 839
Target Start/End: Complemental strand, 21930687 - 21930623
Alignment:
Q  774 cgacaccgacacttgtaattacactgaattatgtgatttttacaaattattagctgtgtcggcgtg 839  Q
    ||||| ||||||||||||||| | |||||||| | ||||||  ||||||||||||| |||||||||    
T  21930687 cgacatcgacacttgtaattaaaatgaattatctaattttt-taaattattagctgagtcggcgtg 21930623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #78
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 714 - 771
Target Start/End: Original strand, 29763129 - 29763186
Alignment:
Q  714 ctatgaagcacggtcacttctcggattaggtgtgtcccggtgacgtacacgtgtcgtg 771  Q
    ||||||||||||| |||| ||||||||||| |||||| | || || ||||||||||||    
T  29763129 ctatgaagcacggacactcctcggattaggcgtgtcctgatgtcggacacgtgtcgtg 29763186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #79
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 782 - 827
Target Start/End: Complemental strand, 30813863 - 30813818
Alignment:
Q  782 acacttgtaattacactgaattatgtgatttttacaaattattagc 827  Q
    |||| ||||||||||||||||||||| |||||  ||||||||||||    
T  30813863 acacctgtaattacactgaattatgtaattttctcaaattattagc 30813818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0361 (Bit Score: 64; Significance: 2e-27; HSPs: 1)
Name: scaffold0361
Description:

Target: scaffold0361; HSP #1
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 714 - 839
Target Start/End: Complemental strand, 14646 - 14524
Alignment:
Q  714 ctatgaagcacggtcacttctcggattaggtgtgtcccggtgacgtacacgtgtcgtgcccgacaccgacacttgtaattacactgaattatgtgatttt 813  Q
    ||||||||||||  |||| ||  ||||||| ||||| ||||| || |||||||||||| ||||||||   ||||||||||||||||||||||||||||||    
T  14646 ctatgaagcacgtacactccttcgattaggcgtgtctcggtgtcggacacgtgtcgtgtccgacacc---acttgtaattacactgaattatgtgatttt 14550  T
Q  814 tacaaattattagctgtgtcggcgtg 839  Q
    | ||||||||||| ||||||||||||    
T  14549 ttcaaattattagttgtgtcggcgtg 14524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 63; Significance: 6e-27; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 714 - 839
Target Start/End: Complemental strand, 241724 - 241588
Alignment:
Q  714 ctatgaagcacggtcacttctcggattaggtgtgtcccggtgacgtacacgtgtcgtgcccgacacc-----------gacacttgtaattacactgaat 802  Q
    ||||||||||||| |||||||||||||||| ||||||||||| || |||||||||||| ||||||||           ||||||  |||||||||| |||    
T  241724 ctatgaagcacggacacttctcggattaggcgtgtcccggtgtcggacacgtgtcgtgtccgacaccaacacgacaccgacactcataattacactaaat 241625  T
Q  803 tatgtgatttttacaaattattagctgtgtcggcgtg 839  Q
    |||||||||||| ||||||||||||||||||||||||    
T  241624 tatgtgatttttccaaattattagctgtgtcggcgtg 241588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0050 (Bit Score: 62; Significance: 2e-26; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 717 - 834
Target Start/End: Complemental strand, 70394 - 70277
Alignment:
Q  717 tgaagcacggtcacttctcggattaggtgtgtcccggtgacgtacacgtgtcgtgcccgacaccgacacttgtaattacactgaattatgtgatttttac 816  Q
    |||||||||  ||||  ||||||||||  ||||| |||| || |||||||||||| ||||||||||||||| ||||||||||||||||||| |||||| |    
T  70394 tgaagcacgaacactcatcggattaggcatgtcctggtgtcggacacgtgtcgtgtccgacaccgacacttataattacactgaattatgttattttttc 70295  T
Q  817 aaattattagctgtgtcg 834  Q
    ||||||||| ||||||||    
T  70294 aaattattaactgtgtcg 70277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0793 (Bit Score: 59; Significance: 1e-24; HSPs: 1)
Name: scaffold0793
Description:

Target: scaffold0793; HSP #1
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 709 - 835
Target Start/End: Original strand, 4816 - 4945
Alignment:
Q  709 ataacctatgaagcacggtcacttctcggattaggtgtgtcccggtgacgtacacgtgtcgtgccc--gacaccgacacttgtaattacactgaattatg 806  Q
    |||| ||||||||||||| |||| ||||||||||| ||||||| ||| || ||| ||||||||  |  |||||| |||||||||||||||||||||||||    
T  4816 ataatctatgaagcacggacactcctcggattaggcgtgtccctgtgtcggacatgtgtcgtgtacaagacaccaacacttgtaattacactgaattatg 4915  T
Q  807 tga-tttttacaaattattagctgtgtcgg 835  Q
    ||| |||||  |||||||||||||||||||    
T  4916 tgattttttttaaattattagctgtgtcgg 4945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0223 (Bit Score: 58; Significance: 6e-24; HSPs: 1)
Name: scaffold0223
Description:

Target: scaffold0223; HSP #1
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 774 - 839
Target Start/End: Complemental strand, 20231 - 20166
Alignment:
Q  774 cgacaccgacacttgtaattacactgaattatgtgatttttacaaattattagctgtgtcggcgtg 839  Q
    |||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  20231 cgacactgacacttgtaattacactgaattatgtgattttttcaaattattagctgtgtcggcgtg 20166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0103 (Bit Score: 54; Significance: 1e-21; HSPs: 1)
Name: scaffold0103
Description:

Target: scaffold0103; HSP #1
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 782 - 839
Target Start/End: Complemental strand, 51862 - 51805
Alignment:
Q  782 acacttgtaattacactgaattatgtgatttttacaaattattagctgtgtcggcgtg 839  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  51862 acacttgtaattacactgaattatgtgattttttcaaattattagctgtgtcggcgtg 51805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 54; Significance: 1e-21; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 774 - 839
Target Start/End: Complemental strand, 46741 - 46676
Alignment:
Q  774 cgacaccgacacttgtaattacactgaattatgtgatttttacaaattattagctgtgtcggcgtg 839  Q
    ||||||||||| ||||||||||||||||||||||||||||| |||||||||| |||||||||||||    
T  46741 cgacaccgacatttgtaattacactgaattatgtgattttttcaaattattaactgtgtcggcgtg 46676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0306 (Bit Score: 51; Significance: 9e-20; HSPs: 1)
Name: scaffold0306
Description:

Target: scaffold0306; HSP #1
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 716 - 839
Target Start/End: Complemental strand, 13523 - 13394
Alignment:
Q  716 atgaagcacggtcacttctcggattaggtgtgtcccggtgacgtacacgtgtcgtgcccgacaccgacac------ttgtaattacactgaattatgtga 809  Q
    ||||||||||| |||| || |||||||||||||||  ||| |  || ||||||||| |||||||||||||      |||||||| |||||||||||||||    
T  13523 atgaagcacggacactccttggattaggtgtgtcctagtgtcagacgcgtgtcgtgtccgacaccgacaccgacccttgtaattgcactgaattatgtga 13424  T
Q  810 tttttacaaattattagctgtgtcggcgtg 839  Q
    ||||  ||||||||||| ||||||||||||    
T  13423 ttttctcaaattattagttgtgtcggcgtg 13394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0152 (Bit Score: 51; Significance: 9e-20; HSPs: 1)
Name: scaffold0152
Description:

Target: scaffold0152; HSP #1
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 716 - 839
Target Start/End: Original strand, 21804 - 21933
Alignment:
Q  716 atgaagcacggtcacttctcggattaggtgtgtcccggtgacgtacacgtgtcgtgcccgacaccgaca------cttgtaattacactgaattatgtga 809  Q
    ||||||||||| |||| || |||||||||||||||  ||| |  || ||||||||| ||||||||||||      ||||||||| |||||||||||||||    
T  21804 atgaagcacggacactccttggattaggtgtgtcctagtgtcagacgcgtgtcgtgtccgacaccgacaccgacccttgtaattgcactgaattatgtga 21903  T
Q  810 tttttacaaattattagctgtgtcggcgtg 839  Q
    ||||  ||||||||||| ||||||||||||    
T  21904 ttttctcaaattattagttgtgtcggcgtg 21933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 49; Significance: 1e-18; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 775 - 839
Target Start/End: Original strand, 17750 - 17814
Alignment:
Q  775 gacaccgacacttgtaattacactgaattatgtgatttttacaaattattagctgtgtcggcgtg 839  Q
    |||||||||||||||||||||||| ||||||||||||||| ||||||||||| |||||| |||||    
T  17750 gacaccgacacttgtaattacactaaattatgtgattttttcaaattattagttgtgtcagcgtg 17814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0246 (Bit Score: 48; Significance: 5e-18; HSPs: 1)
Name: scaffold0246
Description:

Target: scaffold0246; HSP #1
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 733 - 839
Target Start/End: Complemental strand, 19680 - 19570
Alignment:
Q  733 ctcggattaggtgtgtcccggtgacgtacacgtgtcgtgcccgacaccgaca-----cttgtaattacactgaattatgtgatttttacaaattattagc 827  Q
    ||||||||| ||||||  ||||| || |||||||||||| || |||||||||     |||||||||||||||||||||||||||||| |||||||||||     
T  19680 ctcggattaagtgtgtttcggtgtcggacacgtgtcgtgtccaacaccgacataacacttgtaattacactgaattatgtgattttt-caaattattagt 19582  T
Q  828 tgtgtcggcgtg 839  Q
    ||| ||||||||    
T  19581 tgtatcggcgtg 19570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 48; Significance: 5e-18; HSPs: 1)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 777 - 836
Target Start/End: Complemental strand, 130538 - 130479
Alignment:
Q  777 caccgacacttgtaattacactgaattatgtgatttttacaaattattagctgtgtcggc 836  Q
    |||||||||||||||||||||||||||||||||||||| |||| ||||| ||||||||||    
T  130538 caccgacacttgtaattacactgaattatgtgattttttcaaactattaactgtgtcggc 130479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122 (Bit Score: 47; Significance: 2e-17; HSPs: 2)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 765 - 839
Target Start/End: Complemental strand, 8077 - 8004
Alignment:
Q  765 tgtcgtgcccgacaccgacacttgtaattacactgaattatgtgatttttacaaattattagctgtgtcggcgtg 839  Q
    ||||||| ||||||||||||||| ||||||||||| ||||| |||||||| ||||||||||| ||||||||||||    
T  8077 tgtcgtgtccgacaccgacactt-taattacactgtattatatgattttttcaaattattagttgtgtcggcgtg 8004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122; HSP #2
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 774 - 839
Target Start/End: Complemental strand, 8725 - 8660
Alignment:
Q  774 cgacaccgacacttgtaattacactgaattatgtgatttttacaaattattagctgtgtcggcgtg 839  Q
    |||||||||||||| |||||| |||||| |||||||||||   ||||||||||  |||||| ||||    
T  8725 cgacaccgacacttataattatactgaactatgtgattttcctaaattattagaagtgtcgacgtg 8660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0066 (Bit Score: 46; Significance: 8e-17; HSPs: 1)
Name: scaffold0066
Description:

Target: scaffold0066; HSP #1
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 786 - 839
Target Start/End: Original strand, 33375 - 33428
Alignment:
Q  786 ttgtaattacactgaattatgtgatttttacaaattattagctgtgtcggcgtg 839  Q
    |||||||||||||||||||||| |||||| ||||||||||||||||||||||||    
T  33375 ttgtaattacactgaattatgttattttttcaaattattagctgtgtcggcgtg 33428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 46; Significance: 8e-17; HSPs: 2)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 775 - 839
Target Start/End: Original strand, 178819 - 178884
Alignment:
Q  775 gacaccgacacttgtaattacactgaattatg-tgatttttacaaattattagctgtgtcggcgtg 839  Q
    ||||| |||||||||||||||||||||||||| |||||||| ||||||||||| ||||||||||||    
T  178819 gacactgacacttgtaattacactgaattatgatgattttttcaaattattagttgtgtcggcgtg 178884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018; HSP #2
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 781 - 839
Target Start/End: Original strand, 192256 - 192314
Alignment:
Q  781 gacacttgtaattacactgaattatgtgatttttacaaattattagctgtgtcggcgtg 839  Q
    ||||||||||||||||| ||||||||| |||||  |||||||||| | |||||||||||    
T  192256 gacacttgtaattacaccgaattatgtaattttctcaaattattaacggtgtcggcgtg 192314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0722 (Bit Score: 45; Significance: 3e-16; HSPs: 1)
Name: scaffold0722
Description:

Target: scaffold0722; HSP #1
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 762 - 834
Target Start/End: Original strand, 7020 - 7092
Alignment:
Q  762 acgtgtcgtgcccgacaccgacacttgtaattacactgaattatgtgatttttacaaattattagctgtgtcg 834  Q
    |||||| ||| |||||||| ||||||||||||| ||| |||||||| |||||| |||||||||||||||||||    
T  7020 acgtgttgtgtccgacacctacacttgtaattatactaaattatgtaattttttcaaattattagctgtgtcg 7092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 45; Significance: 3e-16; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 711 - 839
Target Start/End: Complemental strand, 71858 - 71717
Alignment:
Q  711 aacctatgaagcacggtcacttctcggattaggtgtgtcccggtgacgtacacgtgtcgtgcccgacaccgacac-----------ttgtaattacactg 799  Q
    |||||||||||||| | |||| ||||||||||  ||||||||||| || |||||||| ||| |||||||||||||           | ||||||||||||    
T  71858 aacctatgaagcaccgacactcctcggattagtcgtgtcccggtgtcggacacgtgttgtgtccgacaccgacacgacactgacactagtaattacactg 71759  T
Q  800 aattatgtga--tttttacaaattattagctgtgtcggcgtg 839  Q
    |||| |||||  ||||| ||||||||||||||||||||||||    
T  71758 aattgtgtgattttttttcaaattattagctgtgtcggcgtg 71717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0083 (Bit Score: 44; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0083
Description:

Target: scaffold0083; HSP #1
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 760 - 807
Target Start/End: Original strand, 45516 - 45563
Alignment:
Q  760 acacgtgtcgtgcccgacaccgacacttgtaattacactgaattatgt 807  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||    
T  45516 acacgtgtcgtgtccgacaccgacacttgtaattacactgaattatgt 45563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0475 (Bit Score: 43; Significance: 0.000000000000005; HSPs: 1)
Name: scaffold0475
Description:

Target: scaffold0475; HSP #1
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 713 - 803
Target Start/End: Complemental strand, 3428 - 3338
Alignment:
Q  713 cctatgaagcacggtcacttctcggattaggtgtgtcccggtgacgtacacgtgtcgtgcccgacaccgacacttgtaattacactgaatt 803  Q
    |||||||||||||| |||| ||||||||||| ||||||| ||| |   |||||||| || ||||||| |||||||||||||||||| ||||    
T  3428 cctatgaagcacggacactcctcggattaggcgtgtcccagtgtccaccacgtgtcttgtccgacactgacacttgtaattacacttaatt 3338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0136 (Bit Score: 43; Significance: 0.000000000000005; HSPs: 1)
Name: scaffold0136
Description:

Target: scaffold0136; HSP #1
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 774 - 836
Target Start/End: Original strand, 3849 - 3911
Alignment:
Q  774 cgacaccgacacttgtaattacactgaattatgtgatttttacaaattattagctgtgtcggc 836  Q
    |||||| ||||||||||||||||||||||||||||||||||  ||||||||| | ||||||||    
T  3849 cgacactgacacttgtaattacactgaattatgtgatttttttaaattattaaccgtgtcggc 3911  T

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Target: scaffold0025 (Bit Score: 43; Significance: 0.000000000000005; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 774 - 831
Target Start/End: Complemental strand, 23829 - 23771
Alignment:
Q  774 cgacaccgacacttgtaattacactgaattatgtgat-ttttacaaattattagctgtg 831  Q
    ||||||||||||||||||||||||||||||||||||| |||| |||||||||| |||||    
T  23829 cgacaccgacacttgtaattacactgaattatgtgatttttttcaaattattaactgtg 23771  T

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Target: scaffold0004 (Bit Score: 43; Significance: 0.000000000000005; HSPs: 4)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 781 - 839
Target Start/End: Complemental strand, 92859 - 92801
Alignment:
Q  781 gacacttgtaattacactgaattatgtgatttttacaaattattagctgtgtcggcgtg 839  Q
    ||||||||||||||||||||||||||| |||||  |||||||||||| |||||||||||    
T  92859 gacacttgtaattacactgaattatgtaattttctcaaattattagcggtgtcggcgtg 92801  T

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Target: scaffold0004; HSP #2
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 775 - 839
Target Start/End: Complemental strand, 123686 - 123619
Alignment:
Q  775 gacaccgacacttgtaattacactgaattatgtga---tttttacaaattattagctgtgtcggcgtg 839  Q
    |||||||||||||||||||||||||||||||||||   |||||  |||||||||||||||| ||||||    
T  123686 gacaccgacacttgtaattacactgaattatgtgattctttttttaaattattagctgtgttggcgtg 123619  T

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Target: scaffold0004; HSP #3
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 774 - 814
Target Start/End: Complemental strand, 83219 - 83179
Alignment:
Q  774 cgacaccgacacttgtaattacactgaattatgtgattttt 814  Q
    ||||||||||| |||||||||||||||||||||| ||||||    
T  83219 cgacaccgacatttgtaattacactgaattatgtcattttt 83179  T

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Target: scaffold0004; HSP #4
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 715 - 780
Target Start/End: Complemental strand, 92940 - 92875
Alignment:
Q  715 tatgaagcacggtcacttctcggattaggtgtgtcccggtgacgtacacgtgtcgtgcccgacacc 780  Q
    |||||||||||| |||| ||||||||||| |||||| |||| |  ||| |||||||| ||||||||    
T  92940 tatgaagcacggacactcctcggattaggcgtgtccaggtgtccgacatgtgtcgtgtccgacacc 92875  T

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Target: scaffold0227 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0227
Description:

Target: scaffold0227; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 782 - 839
Target Start/End: Original strand, 7319 - 7376
Alignment:
Q  782 acacttgtaattacactgaattatgtgatttttacaaattattagctgtgtcggcgtg 839  Q
    |||||| |||||||||| ||||||||||||||| ||||||||||| ||||||||||||    
T  7319 acacttataattacactaaattatgtgatttttccaaattattagttgtgtcggcgtg 7376  T

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Target: scaffold0171 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 2)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 774 - 839
Target Start/End: Complemental strand, 23479 - 23414
Alignment:
Q  774 cgacaccgacacttgtaattacactgaattatgtgatttttacaaattattagctgtgtcggcgtg 839  Q
    |||||||||||||| ||||||||||||||||||||||||||   | |||||| |||||||||||||    
T  23479 cgacaccgacacttataattacactgaattatgtgatttttttgagttattatctgtgtcggcgtg 23414  T

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Target: scaffold0171; HSP #2
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 774 - 814
Target Start/End: Complemental strand, 23570 - 23530
Alignment:
Q  774 cgacaccgacacttgtaattacactgaattatgtgattttt 814  Q
    |||||| ||||||| ||||||||||||||||||||||||||    
T  23570 cgacactgacacttataattacactgaattatgtgattttt 23530  T

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Target: scaffold0154 (Bit Score: 40; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0154
Description:

Target: scaffold0154; HSP #1
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 714 - 785
Target Start/End: Complemental strand, 13543 - 13472
Alignment:
Q  714 ctatgaagcacggtcacttctcggattaggtgtgtcccggtgacgtacacgtgtcgtgcccgacaccgacac 785  Q
    |||||||| |||| |||| |||||||||||||| ||||| || |||| |||||||||| |||||||||||||    
T  13543 ctatgaagtacggacactcctcggattaggtgtatcccgatgtcgtatacgtgtcgtgtccgacaccgacac 13472  T

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Target: scaffold0512 (Bit Score: 39; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0512
Description:

Target: scaffold0512; HSP #1
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 714 - 796
Target Start/End: Original strand, 4976 - 5058
Alignment:
Q  714 ctatgaagcacggtcacttctcggattaggtgtgtcccggtgacgtacacgtgtcgtgcccgacaccgacacttgtaattaca 796  Q
    ||||||||||| | |||| |||||||||||  |||| |  || || |||||||||||| ||||||||||||||||||||||||    
T  4976 ctatgaagcacagacactcctcggattaggcatgtctcaatgtcggacacgtgtcgtgtccgacaccgacacttgtaattaca 5058  T

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Target: scaffold0450 (Bit Score: 39; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0450
Description:

Target: scaffold0450; HSP #1
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 774 - 836
Target Start/End: Original strand, 8635 - 8697
Alignment:
Q  774 cgacaccgacacttgtaattacactgaattatgtgatttttacaaattattagctgtgtcggc 836  Q
    ||||||||||| ||||||||| || |||||||||||| ||| ||||||||||| |||||||||    
T  8635 cgacaccgacatttgtaattataccgaattatgtgatattttcaaattattagttgtgtcggc 8697  T

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Target: scaffold0044 (Bit Score: 39; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 777 - 839
Target Start/End: Complemental strand, 53236 - 53174
Alignment:
Q  777 caccgacacttgtaattacactgaattatgtgatttttacaaattattagctgtgtcggcgtg 839  Q
    ||||||||||| |||||||||||||||||||||||||  ||||||||| || || ||||||||    
T  53236 caccgacacttataattacactgaattatgtgattttctcaaattattggcggtatcggcgtg 53174  T

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Target: scaffold0049 (Bit Score: 38; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 775 - 832
Target Start/End: Complemental strand, 63831 - 63774
Alignment:
Q  775 gacaccgacacttgtaattacactgaattatgtgatttttacaaattattagctgtgt 832  Q
    ||||||||||||||||||| ||||||||||||| |||||  |||||||||||| ||||    
T  63831 gacaccgacacttgtaattgcactgaattatgtaattttctcaaattattagcggtgt 63774  T

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Target: scaffold0020 (Bit Score: 38; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 774 - 835
Target Start/End: Original strand, 135312 - 135373
Alignment:
Q  774 cgacaccgacacttgtaattacactgaattatgtgatttttacaaattattagctgtgtcgg 835  Q
    |||||||||||| | ||||||||| |||||||||||||||  |||||||||||| |||||||    
T  135312 cgacaccgacacatataattacacagaattatgtgattttctcaaattattagcagtgtcgg 135373  T

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Target: scaffold0697 (Bit Score: 36; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0697
Description:

Target: scaffold0697; HSP #1
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 764 - 839
Target Start/End: Complemental strand, 1713 - 1638
Alignment:
Q  764 gtgtcgtgcccgacaccgacacttgtaattacactgaattatgtgatttttacaaattattagctgtgtcggcgtg 839  Q
    |||||||| ||||||||||||||| |||||| ||  |||||| |||||||  |||||||||| | |||||||||||    
T  1713 gtgtcgtgtccgacaccgacacttataattataccaaattatatgattttctcaaattattaacggtgtcggcgtg 1638  T

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Target: scaffold0008 (Bit Score: 35; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 774 - 832
Target Start/End: Original strand, 263372 - 263430
Alignment:
Q  774 cgacaccgacacttgtaattacactgaattatgtgatttttacaaattattagctgtgt 832  Q
    |||||| ||||||| |||||||||||||||||||| ||||  |||||||||||| ||||    
T  263372 cgacactgacacttataattacactgaattatgtggttttctcaaattattagcagtgt 263430  T

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Target: scaffold0057 (Bit Score: 33; Significance: 0.000000005; HSPs: 1)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 787 - 835
Target Start/End: Complemental strand, 24071 - 24023
Alignment:
Q  787 tgtaattacactgaattatgtgatttttacaaattattagctgtgtcgg 835  Q
    |||||||||||| ||||||| |||||||  |||||||||||||||||||    
T  24071 tgtaattacactaaattatgagatttttgaaaattattagctgtgtcgg 24023  T

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Target: scaffold0036 (Bit Score: 33; Significance: 0.000000005; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 774 - 826
Target Start/End: Original strand, 9747 - 9799
Alignment:
Q  774 cgacaccgacacttgtaattacactgaattatgtgatttttacaaattattag 826  Q
    |||||||||||| | |||||||||||||||| ||||||||  |||||||||||    
T  9747 cgacaccgacacatataattacactgaattaagtgattttctcaaattattag 9799  T

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Target: scaffold1528 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold1528
Description:

Target: scaffold1528; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 792 - 835
Target Start/End: Complemental strand, 1076 - 1033
Alignment:
Q  792 ttacactgaattatgtgatttttacaaattattagctgtgtcgg 835  Q
    |||||||||||||||| |||||| |||||||||||| |||||||    
T  1076 ttacactgaattatgtaattttttcaaattattagcggtgtcgg 1033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0236 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0236
Description:

Target: scaffold0236; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 774 - 813
Target Start/End: Original strand, 25768 - 25807
Alignment:
Q  774 cgacaccgacacttgtaattacactgaattatgtgatttt 813  Q
    |||||||||||||| |||||||||| ||||||||||||||    
T  25768 cgacaccgacacttataattacactaaattatgtgatttt 25807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0123 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0123
Description:

Target: scaffold0123; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 778 - 833
Target Start/End: Original strand, 44529 - 44584
Alignment:
Q  778 accgacacttgtaattacactgaattatgtgatttttacaaattattagctgtgtc 833  Q
    |||||||| | |||||||||||||||||||||||||  |||||| ||||| |||||    
T  44529 accgacacatataattacactgaattatgtgattttctcaaatttttagcggtgtc 44584  T

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Target: scaffold0086 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0086
Description:

Target: scaffold0086; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 714 - 785
Target Start/End: Complemental strand, 3058 - 2987
Alignment:
Q  714 ctatgaagcacggtcacttctcggattaggtgtgtcccggtgacgtacacgtgtcgtgcccgacaccgacac 785  Q
    ||||| ||||||| |||| ||||||||||| |||| |||||| || |||||||||||| | || ||||||||    
T  3058 ctatggagcacggacactcctcggattaggcgtgttccggtgtcgaacacgtgtcgtgtctgataccgacac 2987  T

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Target: scaffold0007 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 780 - 839
Target Start/End: Original strand, 225274 - 225333
Alignment:
Q  780 cgacacttgtaattacactgaattatgtgatttttacaaattattagctgtgtcggcgtg 839  Q
    |||||||| |||||||| || ||||||| |||||  |||||||||| |||||||||||||    
T  225274 cgacacttataattacattgtattatgtcattttctcaaattattatctgtgtcggcgtg 225333  T

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Target: scaffold0009 (Bit Score: 31; Significance: 0.00000008; HSPs: 2)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 736 - 814
Target Start/End: Original strand, 174515 - 174593
Alignment:
Q  736 ggattaggtgtgtcccggtgacgtacacgtgtcgtgcccgacaccgacacttgtaattacactgaattatgtgattttt 814  Q
    |||||||| |||| ||| || || |||| || |||| || ||||||||| |||||||||| ||||||||||| ||||||    
T  174515 ggattaggcgtgttccgatgtcggacacatgacgtgtccaacaccgacatttgtaattacgctgaattatgtcattttt 174593  T

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Target: scaffold0009; HSP #2
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 736 - 814
Target Start/End: Original strand, 180028 - 180106
Alignment:
Q  736 ggattaggtgtgtcccggtgacgtacacgtgtcgtgcccgacaccgacacttgtaattacactgaattatgtgattttt 814  Q
    |||||||| |||| ||| || || |||| || |||| || ||||||||| |||||||||| ||||||||||| ||||||    
T  180028 ggattaggcgtgttccgatgtcggacacatgacgtgtccaacaccgacatttgtaattacgctgaattatgtcattttt 180106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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