View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15364_low_6 (Length: 372)
Name: NF15364_low_6
Description: NF15364
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15364_low_6 |
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| [»] chr3 (1 HSPs) |
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Alignment Details
Target: chr3 (Bit Score: 346; Significance: 0; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 346; E-Value: 0
Query Start/End: Original strand, 19 - 372
Target Start/End: Original strand, 34335642 - 34335995
Alignment:
| Q |
19 |
atctaaggcctaggcaaagatgaaggtgatttagggtgcaacttctttctaacaatagcacaagatctaccatcaattagtttaataaaatcgttaactc |
118 |
Q |
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| T |
34335642 |
atctaaggcctaggcaaagatgaaggtgatttagggtgcaacttctttctaacaatagcacaagatctaccatcaattagtttaataaaatcgttaactc |
34335741 |
T |
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| Q |
119 |
tgaaggcacctttaatgtaatgctcaatcttttgatcattatcaccaaagacgttacaaagggcacctaagtaactccatggcaatttccctgttaccct |
218 |
Q |
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| T |
34335742 |
tgaaggcacctttaatgtaatgctcaatcttttgatcattatcaccaaagacgttacaaagggcacctaagtaactccatggcaatttccctgttaccct |
34335841 |
T |
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| Q |
219 |
cacagaatgtcccacggcacgaaaagcgtccttacaaacaacgcgattcaaatcaaatttcgttcgatgtccaagtgccgcacgcggtgctggtggaggt |
318 |
Q |
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| T |
34335842 |
cacagaatgtcccacggcacgaaaagcgtccttacaaacaacgcgattcaaatcaaatttcgttccatgtccaagtgccgcacgcggtgctggtggaggt |
34335941 |
T |
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| Q |
319 |
ggattcagtttcaaccttagacaatgttctatggtgctggctttggcagggaca |
372 |
Q |
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| T |
34335942 |
ggattcagtttcaaccttaaacaatgttctatggtgctggctttggcagggaca |
34335995 |
T |
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