View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15365_high_15 (Length: 348)
Name: NF15365_high_15
Description: NF15365
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15365_high_15 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 325; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 325; E-Value: 0
Query Start/End: Original strand, 20 - 348
Target Start/End: Original strand, 48763650 - 48763978
Alignment:
| Q |
20 |
catcatcatcaggtggttcactaccgctctcatcatcaatatcctcctcaagaagttgagcagccagagcatacttcttcttccaaaaccaaacctcatt |
119 |
Q |
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| T |
48763650 |
catcatcatcaggtggttcactaccgctctcatcatcaatatcctcctcaagaagttgagcagccagagcatacttcttcttccaaaaccaaacctcatt |
48763749 |
T |
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| Q |
120 |
ccgatgaacaacctcatcacaaaattttgaaacaggtcaaccaacttgcctaatttcatcttcattccatgttccaattgttcattcatattattatatt |
219 |
Q |
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| T |
48763750 |
ccgatgaacaacctcatcacaaaattttgaaacaggtcaaccaacttgcctaatttcatcttcattccatgttccaattgttcattcatattattatatt |
48763849 |
T |
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| Q |
220 |
gttatgtatctattcgtgttgatcatatctctctaaattgcatctctacaacttgactagggttttggttgggattttttaggtggagtattatttcagt |
319 |
Q |
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| T |
48763850 |
gttatgtatctattcgtgttgatcatatctctctaaattgcatctctacaacttgactagggttttggttgggattttttaggtggagtattatttcagc |
48763949 |
T |
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| Q |
320 |
gatttaaacttggctaccaccgatcattt |
348 |
Q |
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| T |
48763950 |
gatttaaacttggctaccaccgatcattt |
48763978 |
T |
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