View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15365_high_19 (Length: 338)
Name: NF15365_high_19
Description: NF15365
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15365_high_19 |
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Alignment Details
Target: chr6 (Bit Score: 303; Significance: 1e-170; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 303; E-Value: 1e-170
Query Start/End: Original strand, 1 - 327
Target Start/End: Complemental strand, 16975038 - 16974712
Alignment:
| Q |
1 |
tctgcagtttctacagaggaaaggaatggcaattcaggctgagggataccggccttaatgcttaattcagaaagttgtgaaagaaactctactccttcgg |
100 |
Q |
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| T |
16975038 |
tctgcagtttctacagaggaaaggaatggcaattcaggctgagggataccggccttaatgcttaattcagaaagttgtgaaagaaactctactccttcgg |
16974939 |
T |
|
| Q |
101 |
ttctcatttgagatagataaagagtggttaaactaccaagtcgaggaagttgacgacagtttctgcacttggtagaaatatttatcatccagtttgaaat |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
16974938 |
ttctcatttgagatagataaagagtggttaaactaccaagtcgaggaagttgacgacagtttctgcacttggtagaaatatttatcatccagtttgaaat |
16974839 |
T |
|
| Q |
201 |
atttacttctccataaccgctcatctcaaaaccctcgagatctctgtgaggctcgagaatttgatgtggagcggaatcagcatcgcaaccacaagacaag |
300 |
Q |
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||||||||||||||||| |||||||| ||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
16974838 |
atttacttctccataactgctcatcttaaaaccctcgagacctctctgaggctcgagaatttgatgtggagcggaatcagcatcgcaaccacaagacaag |
16974739 |
T |
|
| Q |
301 |
ttgtaggatgcattctgaaggcctttg |
327 |
Q |
| |
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|||||||| | |||||||||||||||| |
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| T |
16974738 |
ttgtaggaggtattctgaaggcctttg |
16974712 |
T |
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