View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF15365_high_29 (Length: 315)

Name: NF15365_high_29
Description: NF15365
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF15365_high_29
NF15365_high_29
[»] chr8 (40 HSPs)
chr8 (1-307)||(6311303-6311613)
chr8 (1-305)||(30655652-30655959)
chr8 (1-305)||(18870345-18870653)
chr8 (1-305)||(18852951-18853259)
chr8 (1-305)||(36979383-36979689)
chr8 (1-305)||(33037592-33037897)
chr8 (1-306)||(4759857-4760166)
chr8 (1-305)||(10688924-10689234)
chr8 (1-305)||(1261741-1262045)
chr8 (1-173)||(25328184-25328357)
chr8 (1-173)||(7289831-7290005)
chr8 (1-286)||(31071035-31071321)
chr8 (1-288)||(26287907-26288183)
chr8 (1-288)||(26301164-26301440)
chr8 (1-288)||(26313158-26313434)
chr8 (226-307)||(7289750-7289831)
chr8 (1-168)||(39784734-39784901)
chr8 (1-118)||(10684224-10684343)
chr8 (1-168)||(35745397-35745566)
chr8 (226-305)||(25327979-25328058)
chr8 (226-305)||(25328105-25328184)
chr8 (17-288)||(4456050-4456317)
chr8 (1-79)||(26403240-26403322)
chr8 (220-288)||(7412563-7412629)
chr8 (227-290)||(39784665-39784728)
chr8 (220-288)||(4696416-4696482)
chr8 (1-77)||(7412346-7412426)
chr8 (1-288)||(19175562-19175846)
chr8 (1-79)||(6127226-6127308)
chr8 (1-79)||(23799587-23799669)
chr8 (220-288)||(5702288-5702354)
chr8 (1-76)||(4696609-4696688)
chr8 (1-57)||(9765852-9765911)
chr8 (220-285)||(9054231-9054294)
chr8 (227-277)||(10684116-10684168)
chr8 (220-288)||(19752202-19752268)
chr8 (224-288)||(23799384-23799446)
chr8 (227-277)||(35745572-35745624)
chr8 (1-76)||(19752407-19752486)
chr8 (220-288)||(26403035-26403103)
[»] chr5 (56 HSPs)
chr5 (1-305)||(31180220-31180526)
chr5 (1-305)||(30631412-30631719)
chr5 (1-305)||(24135854-24136159)
chr5 (1-305)||(38219404-38219708)
chr5 (1-305)||(35387668-35387972)
chr5 (1-173)||(1457067-1457241)
chr5 (1-173)||(43592285-43592459)
chr5 (1-173)||(27449820-27449994)
chr5 (1-173)||(15044692-15044865)
chr5 (8-173)||(43598737-43598904)
chr5 (8-173)||(43604229-43604396)
chr5 (8-173)||(43609721-43609888)
chr5 (1-173)||(27444976-27445150)
chr5 (1-168)||(28807485-28807651)
chr5 (226-307)||(1456986-1457067)
chr5 (226-307)||(27445150-27445231)
chr5 (226-307)||(27449994-27450075)
chr5 (1-168)||(37556533-37556701)
chr5 (1-168)||(37561355-37561523)
chr5 (1-189)||(38192179-38192369)
chr5 (226-307)||(43592459-43592540)
chr5 (226-307)||(43598904-43598985)
chr5 (226-307)||(43604396-43604477)
chr5 (226-307)||(43609888-43609969)
chr5 (226-307)||(15044865-15044947)
chr5 (1-118)||(31396953-31397072)
chr5 (1-118)||(31401810-31401929)
chr5 (1-168)||(2785381-2785550)
chr5 (1-168)||(33791322-33791491)
chr5 (1-288)||(15464537-15464823)
chr5 (1-113)||(33768185-33768299)
chr5 (1-306)||(36932138-36932442)
chr5 (1-77)||(9353344-9353424)
chr5 (1-288)||(14520235-14520519)
chr5 (1-79)||(10281756-10281838)
chr5 (220-305)||(24553318-24553401)
chr5 (227-277)||(28807429-28807479)
chr5 (221-287)||(11181641-11181705)
chr5 (1-79)||(11916982-11917064)
chr5 (1-79)||(19588751-19588833)
chr5 (220-286)||(28832480-28832544)
chr5 (17-79)||(3880321-3880386)
chr5 (220-288)||(9353140-9353206)
chr5 (220-288)||(11916780-11916846)
chr5 (1-77)||(12084187-12084267)
chr5 (220-287)||(31300404-31300469)
chr5 (1-79)||(17003970-17004052)
chr5 (227-277)||(2785556-2785608)
chr5 (228-288)||(7160712-7160770)
chr5 (220-288)||(17003767-17003833)
chr5 (220-288)||(19588968-19589034)
chr5 (227-277)||(31396843-31396895)
chr5 (227-277)||(31401700-31401752)
chr5 (227-277)||(33768365-33768417)
chr5 (227-277)||(33791497-33791549)
chr5 (1-76)||(28832264-28832343)
[»] chr3 (65 HSPs)
chr3 (1-305)||(28503647-28503955)
chr3 (1-305)||(7167250-7167558)
chr3 (37-305)||(28501480-28501750)
chr3 (1-305)||(2671370-2671677)
chr3 (1-302)||(8477368-8477674)
chr3 (1-306)||(8738846-8739154)
chr3 (1-305)||(40372580-40372886)
chr3 (1-305)||(9091085-9091392)
chr3 (1-173)||(22173100-22173274)
chr3 (1-288)||(26928396-26928682)
chr3 (1-286)||(1305954-1306239)
chr3 (1-158)||(18656441-18656598)
chr3 (1-305)||(32143326-32143629)
chr3 (226-307)||(22173019-22173100)
chr3 (1-172)||(2676993-2677166)
chr3 (1-172)||(2672837-2673010)
chr3 (1-118)||(8512223-8512342)
chr3 (1-118)||(8517103-8517222)
chr3 (1-263)||(27452963-27453224)
chr3 (1-118)||(32475491-32475608)
chr3 (1-118)||(32480349-32480466)
chr3 (1-172)||(24968113-24968286)
chr3 (1-305)||(27986236-27986528)
chr3 (1-288)||(27974749-27975034)
chr3 (128-288)||(33386472-33386628)
chr3 (1-77)||(8370488-8370568)
chr3 (1-79)||(1736305-1736387)
chr3 (1-79)||(18552883-18552965)
chr3 (227-290)||(18656614-18656677)
chr3 (1-79)||(36029098-36029180)
chr3 (220-288)||(4386774-4386840)
chr3 (1-288)||(16264355-16264638)
chr3 (1-77)||(21711228-21711308)
chr3 (220-288)||(36029316-36029382)
chr3 (220-288)||(40592579-40592645)
chr3 (1-76)||(33386669-33386748)
chr3 (1-79)||(3716002-3716084)
chr3 (1-79)||(30709790-30709872)
chr3 (1-79)||(40592782-40592864)
chr3 (220-285)||(47923704-47923767)
chr3 (17-79)||(48438236-48438301)
chr3 (220-288)||(1736101-1736167)
chr3 (220-288)||(3323488-3323554)
chr3 (220-288)||(3328154-3328220)
chr3 (220-288)||(8370286-8370352)
chr3 (1-42)||(10207940-10207981)
chr3 (220-288)||(21711445-21711511)
chr3 (220-288)||(24694963-24695029)
chr3 (220-288)||(26299211-26299277)
chr3 (34-77)||(6794715-6794759)
chr3 (17-79)||(40844674-40844738)
chr3 (220-286)||(8126853-8126917)
chr3 (226-288)||(23392106-23392166)
chr3 (227-277)||(2672783-2672835)
chr3 (227-277)||(2676939-2676991)
chr3 (220-288)||(6794512-6794578)
chr3 (227-277)||(8512398-8512450)
chr3 (227-277)||(8517278-8517330)
chr3 (220-261)||(10274605-10274646)
chr3 (227-277)||(24968288-24968340)
chr3 (220-288)||(35925701-35925767)
chr3 (220-288)||(39032352-39032417)
chr3 (1-76)||(1417493-1417572)
chr3 (229-288)||(23410529-23410586)
chr3 (1-76)||(39039995-39040074)
[»] chr4 (48 HSPs)
chr4 (1-305)||(24741946-24742253)
chr4 (1-305)||(29760647-29760954)
chr4 (1-173)||(9224312-9224486)
chr4 (1-173)||(51520463-51520637)
chr4 (1-173)||(9229099-9229273)
chr4 (1-172)||(45357203-45357375)
chr4 (1-172)||(45347723-45347896)
chr4 (1-173)||(3814030-3814202)
chr4 (1-158)||(5732671-5732828)
chr4 (1-305)||(28468325-28468620)
chr4 (1-168)||(18855733-18855900)
chr4 (226-304)||(51520637-51520715)
chr4 (226-307)||(18712590-18712671)
chr4 (8-113)||(56146677-56146783)
chr4 (226-307)||(9224231-9224312)
chr4 (226-307)||(9229018-9229099)
chr4 (1-305)||(31985424-31985725)
chr4 (226-305)||(3814202-3814281)
chr4 (227-290)||(45347658-45347721)
chr4 (1-288)||(16623101-16623385)
chr4 (1-77)||(36315241-36315321)
chr4 (1-77)||(36329450-36329530)
chr4 (1-288)||(5396479-5396763)
chr4 (227-290)||(5732844-5732907)
chr4 (1-79)||(6743425-6743507)
chr4 (1-79)||(10047384-10047466)
chr4 (147-288)||(16628680-16628815)
chr4 (1-79)||(39245999-39246081)
chr4 (220-285)||(5112460-5112523)
chr4 (220-288)||(3777772-3777838)
chr4 (1-79)||(38152449-38152531)
chr4 (227-290)||(45357138-45357201)
chr4 (1-78)||(5143264-5143345)
chr4 (227-277)||(18855906-18855956)
chr4 (220-288)||(5269008-5269074)
chr4 (220-288)||(10047604-10047670)
chr4 (220-288)||(25861841-25861907)
chr4 (220-288)||(36315038-36315104)
chr4 (220-288)||(36329247-36329313)
chr4 (1-76)||(5269204-5269283)
chr4 (1-79)||(3796529-3796611)
chr4 (1-79)||(16630690-16630772)
chr4 (1-78)||(5147682-5147763)
chr4 (220-285)||(6743226-6743289)
chr4 (34-79)||(24333850-24333896)
chr4 (1-77)||(3777554-3777634)
chr4 (221-288)||(38152246-38152311)
chr4 (220-287)||(42599383-42599448)
[»] chr7 (52 HSPs)
chr7 (1-305)||(20357331-20357638)
chr7 (1-305)||(2057971-2058281)
chr7 (1-305)||(1533228-1533535)
chr7 (1-305)||(21639814-21640118)
chr7 (1-288)||(21646012-21646299)
chr7 (1-174)||(12406337-12406512)
chr7 (1-173)||(24024232-24024405)
chr7 (1-173)||(12396917-12397091)
chr7 (1-305)||(18413646-18413948)
chr7 (1-305)||(18408769-18409072)
chr7 (1-173)||(31109489-31109662)
chr7 (1-168)||(19992319-19992487)
chr7 (226-307)||(12397091-12397172)
chr7 (228-305)||(4873310-4873387)
chr7 (226-307)||(31109407-31109489)
chr7 (226-307)||(24024151-24024232)
chr7 (1-82)||(4866736-4866819)
chr7 (228-300)||(12406513-12406585)
chr7 (1-118)||(24261283-24261402)
chr7 (1-118)||(24266162-24266281)
chr7 (1-118)||(16880079-16880197)
chr7 (1-118)||(16884935-16885053)
chr7 (1-168)||(21812149-21812317)
chr7 (1-79)||(29159808-29159890)
chr7 (1-78)||(21983289-21983370)
chr7 (3-79)||(55955-56034)
chr7 (1-79)||(46516320-46516402)
chr7 (1-79)||(49091666-49091748)
chr7 (1-73)||(47263683-47263757)
chr7 (220-288)||(20284312-20284378)
chr7 (220-288)||(23402821-23402887)
chr7 (220-287)||(4796477-4796542)
chr7 (1-78)||(21988913-21988992)
chr7 (220-305)||(2479559-2479642)
chr7 (220-285)||(21989131-21989194)
chr7 (220-288)||(2580613-2580678)
chr7 (220-288)||(2647505-2647571)
chr7 (220-288)||(44847933-44847999)
chr7 (1-77)||(44848696-44848776)
chr7 (220-288)||(46516113-46516179)
chr7 (1-76)||(9190021-9190100)
chr7 (1-76)||(20284094-20284173)
chr7 (1-77)||(2479342-2479421)
chr7 (1-79)||(2647706-2647788)
chr7 (227-277)||(21812092-21812143)
chr7 (1-79)||(33332460-33332542)
chr7 (220-288)||(3047477-3047543)
chr7 (220-288)||(9184982-9185048)
chr7 (227-277)||(24266054-24266106)
chr7 (220-288)||(47263889-47263955)
chr7 (1-76)||(2580395-2580474)
chr7 (220-263)||(9189840-9189881)
[»] chr2 (47 HSPs)
chr2 (1-305)||(11098711-11099018)
chr2 (1-305)||(14291494-14291801)
chr2 (1-305)||(9296186-9296492)
chr2 (1-288)||(3491756-3492043)
chr2 (1-173)||(39811894-39812067)
chr2 (1-172)||(32246794-32246966)
chr2 (1-139)||(44312563-44312703)
chr2 (1-209)||(25398501-25398711)
chr2 (1-209)||(25403639-25403849)
chr2 (34-209)||(25407663-25407838)
chr2 (1-168)||(19344427-19344596)
chr2 (1-168)||(19349285-19349454)
chr2 (226-307)||(39811812-39811894)
chr2 (1-305)||(40738849-40739140)
chr2 (220-288)||(25409854-25409922)
chr2 (1-79)||(21629949-21630030)
chr2 (1-79)||(8040065-8040147)
chr2 (1-79)||(13569333-13569415)
chr2 (227-290)||(32246968-32247031)
chr2 (147-288)||(36757570-36757707)
chr2 (1-77)||(28259189-28259269)
chr2 (220-288)||(39483156-39483222)
chr2 (1-80)||(20522225-20522308)
chr2 (128-289)||(23078278-23078433)
chr2 (1-79)||(10445454-10445536)
chr2 (1-79)||(17865208-17865290)
chr2 (220-286)||(21630168-21630232)
chr2 (1-79)||(34388863-34388945)
chr2 (1-79)||(34682344-34682426)
chr2 (220-288)||(41586358-41586425)
chr2 (220-288)||(14698817-14698883)
chr2 (220-288)||(17865428-17865494)
chr2 (220-288)||(20522445-20522511)
chr2 (18-79)||(31056067-31056131)
chr2 (220-288)||(33118358-33118424)
chr2 (220-288)||(33528432-33528498)
chr2 (220-288)||(34389074-34389140)
chr2 (1-79)||(8390160-8390242)
chr2 (1-79)||(10707262-10707344)
chr2 (1-79)||(14699018-14699099)
chr2 (1-79)||(33528631-33528713)
chr2 (220-288)||(10445275-10445341)
chr2 (220-288)||(28258985-28259051)
chr2 (17-74)||(42039684-42039744)
chr2 (220-287)||(2869501-2869566)
chr2 (226-289)||(29867780-29867840)
chr2 (220-288)||(31056266-31056334)
[»] chr1 (49 HSPs)
chr1 (1-305)||(24787148-24787455)
chr1 (1-305)||(24202556-24202860)
chr1 (1-173)||(41390587-41390760)
chr1 (1-173)||(41398242-41398415)
chr1 (1-305)||(19358631-19358934)
chr1 (1-305)||(19361220-19361523)
chr1 (1-172)||(25444996-25445168)
chr1 (1-248)||(19379916-19380163)
chr1 (122-305)||(19366095-19366276)
chr1 (1-168)||(39445506-39445673)
chr1 (1-168)||(1054923-1055090)
chr1 (1-168)||(44023785-44023952)
chr1 (226-307)||(41398415-41398497)
chr1 (226-307)||(41390760-41390842)
chr1 (1-118)||(43988424-43988543)
chr1 (3-287)||(3281715-3281995)
chr1 (1-79)||(47703946-47704028)
chr1 (1-77)||(26644909-26644989)
chr1 (1-79)||(9476266-9476348)
chr1 (1-79)||(19072933-19073015)
chr1 (1-79)||(19120823-19120905)
chr1 (3-79)||(29651818-29651898)
chr1 (220-288)||(47098633-47098699)
chr1 (220-288)||(47102647-47102713)
chr1 (227-290)||(1054854-1054917)
chr1 (1-79)||(13598403-13598485)
chr1 (34-305)||(13604413-13604679)
chr1 (1-79)||(16124526-16124608)
chr1 (227-290)||(25439738-25439801)
chr1 (227-290)||(25444931-25444994)
chr1 (1-79)||(27104382-27104464)
chr1 (227-290)||(39445679-39445742)
chr1 (227-290)||(44023716-44023779)
chr1 (220-288)||(29652036-29652102)
chr1 (1-77)||(37069775-37069855)
chr1 (220-287)||(13598623-13598688)
chr1 (220-287)||(27104211-27104275)
chr1 (1-79)||(775677-775759)
chr1 (98-172)||(25439803-25439877)
chr1 (223-288)||(21536378-21536441)
chr1 (220-288)||(32889661-32889727)
chr1 (227-277)||(43988314-43988366)
chr1 (220-263)||(16124347-16124388)
chr1 (34-77)||(21536581-21536625)
chr1 (223-282)||(22819657-22819714)
chr1 (228-287)||(37069998-37070055)
chr1 (220-288)||(40816622-40816690)
chr1 (1-76)||(47098837-47098916)
chr1 (220-288)||(47703741-47703809)
[»] chr6 (44 HSPs)
chr6 (1-305)||(5674554-5674861)
chr6 (1-173)||(11856980-11857154)
chr6 (1-173)||(22010602-22010776)
chr6 (1-173)||(14737482-14737655)
chr6 (1-173)||(28184511-28184684)
chr6 (1-173)||(14742342-14742515)
chr6 (1-172)||(28155477-28155648)
chr6 (226-307)||(11857154-11857235)
chr6 (226-307)||(22010521-22010602)
chr6 (226-305)||(14737403-14737482)
chr6 (1-172)||(33330351-33330524)
chr6 (1-168)||(6438507-6438674)
chr6 (226-305)||(14742263-14742342)
chr6 (1-172)||(16838750-16838923)
chr6 (1-172)||(33335848-33336021)
chr6 (1-168)||(6005423-6005592)
chr6 (122-305)||(22709137-22709316)
chr6 (226-296)||(28184684-28184757)
chr6 (1-77)||(5757490-5757570)
chr6 (227-290)||(28155412-28155475)
chr6 (1-74)||(21356041-21356118)
chr6 (1-77)||(31086485-31086565)
chr6 (1-79)||(5572251-5572333)
chr6 (227-290)||(6438680-6438743)
chr6 (1-78)||(4629959-4630040)
chr6 (1-78)||(10077176-10077257)
chr6 (220-288)||(5017304-5017370)
chr6 (1-79)||(22963705-22963786)
chr6 (1-79)||(23824607-23824688)
chr6 (220-288)||(31936798-31936864)
chr6 (34-76)||(22709059-22709102)
chr6 (220-288)||(5572051-5572117)
chr6 (220-288)||(5757286-5757352)
chr6 (227-277)||(6005598-6005650)
chr6 (227-277)||(16838925-16838977)
chr6 (220-288)||(22963922-22963988)
chr6 (220-288)||(23824405-23824471)
chr6 (220-288)||(24435780-24435845)
chr6 (220-288)||(31979735-31979801)
chr6 (227-277)||(33330297-33330349)
chr6 (227-277)||(33335794-33335846)
chr6 (1-33)||(5343487-5343519)
chr6 (220-288)||(21801150-21801218)
chr6 (8-79)||(21801354-21801429)
[»] scaffold0188 (2 HSPs)
scaffold0188 (1-305)||(17739-18043)
scaffold0188 (1-305)||(23832-24136)
[»] scaffold0135 (2 HSPs)
scaffold0135 (1-173)||(34967-35141)
scaffold0135 (226-307)||(34886-34967)
[»] scaffold0355 (4 HSPs)
scaffold0355 (1-173)||(9549-9721)
scaffold0355 (226-307)||(3672-3754)
scaffold0355 (91-173)||(3754-3836)
scaffold0355 (226-261)||(9514-9549)
[»] scaffold0464 (2 HSPs)
scaffold0464 (1-168)||(369-536)
scaffold0464 (227-290)||(542-605)
[»] scaffold0197 (4 HSPs)
scaffold0197 (1-118)||(14269-14388)
scaffold0197 (1-141)||(19102-19244)
scaffold0197 (227-277)||(14161-14213)
scaffold0197 (228-277)||(19017-19068)
[»] scaffold0259 (2 HSPs)
scaffold0259 (1-118)||(2211-2330)
scaffold0259 (227-277)||(2103-2155)
[»] scaffold0028 (2 HSPs)
scaffold0028 (1-118)||(148916-149035)
scaffold0028 (227-277)||(148808-148860)
[»] scaffold0140 (1 HSPs)
scaffold0140 (1-305)||(8208-8511)
[»] scaffold0009 (2 HSPs)
scaffold0009 (1-62)||(181980-182043)
scaffold0009 (227-277)||(176829-176881)
[»] scaffold0087 (3 HSPs)
scaffold0087 (128-288)||(36640-36795)
scaffold0087 (220-288)||(43769-43835)
scaffold0087 (1-77)||(43973-44053)
[»] scaffold0036 (2 HSPs)
scaffold0036 (1-77)||(85688-85768)
scaffold0036 (220-288)||(85906-85972)
[»] scaffold0006 (4 HSPs)
scaffold0006 (1-79)||(5688-5770)
scaffold0006 (34-305)||(133070-133336)
scaffold0006 (220-287)||(5908-5973)
scaffold0006 (1-79)||(2497-2579)
[»] scaffold0148 (1 HSPs)
scaffold0148 (3-79)||(10736-10816)
[»] scaffold0098 (1 HSPs)
scaffold0098 (18-76)||(45276-45337)


Alignment Details
Target: chr8 (Bit Score: 253; Significance: 1e-141; HSPs: 40)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 253; E-Value: 1e-141
Query Start/End: Original strand, 1 - 307
Target Start/End: Original strand, 6311303 - 6311613
Alignment:
Q  1 tgttgacccagttcagccaatatggcctaatctggg--agagagcagctctccaatccaatatgagaaagtgttacaaaaggttgcaagaagctctagct 98  Q
    ||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||     
T  6311303 tgttgacccagttcagccaatatggcctaatctgggggagagagcagctctccaatccaatatgagaaagtgttacaaaaggttacaagaaactctagcc 6311402  T
Q  99 atcaagctttacacaagacagaccctagattctaccctttggtgtttccccactctcacaagatgaaccctaaaa--gagaagtcactagaggaagcttt 196  Q
     ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||    
T  6311403 ttcaagctttacacaagacaaaccctagattctaccctttggtgtttccccactctcacaagatgaaccctaaaaaagagaagtcactagaggaagcttt 6311502  T
Q  197 aaatccttccaaccaatgaactcctcactacccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacccattggttc 296  Q
      ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  6311503 tgatccttccaactaatgaactcctcactacccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaaccctttggttc 6311602  T
Q  297 cctcctttgct 307  Q
    |||||||||||    
T  6311603 cctcctttgct 6311613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 218; E-Value: 1e-120
Query Start/End: Original strand, 1 - 305
Target Start/End: Original strand, 30655652 - 30655959
Alignment:
Q  1 tgttgacccagttcagccaatatggcctaatctggg--agagagcagctctccaatccaatatga-gaaagtgttacaaaaggttgcaagaagctctagc 97  Q
    ||||||||||||||||||||||||||||||||||||  ||||||||||||||||||| ||||||| |||||||||||||| |||| |||||| |  ||||    
T  30655652 tgttgacccagttcagccaatatggcctaatctgggggagagagcagctctccaatctaatatgatgaaagtgttacaaagggttacaagaaacaatagc 30655751  T
Q  98 tatcaagctttacacaaga-cagaccctagattctaccctttggtgtttccccactctcacaagatgaaccctaaaagagaagtcactagaggaagcttt 196  Q
      |||||||| |||||||| || |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||    
T  30655752 cttcaagctt-acacaagaacaaaccctagattctaccctttggtgtttccccactctcacaatatgaaccctaaaagagaagacactagaggaagcttt 30655850  T
Q  197 aaatccttccaaccaatgaactcctcactacccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacccattggttc 296  Q
    | ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  30655851 agatccttccaactaatgaactcctcactacccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaaccctttggttc 30655950  T
Q  297 cctcctttg 305  Q
    |||||||||    
T  30655951 cctcctttg 30655959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 207; E-Value: 1e-113
Query Start/End: Original strand, 1 - 305
Target Start/End: Complemental strand, 18870653 - 18870345
Alignment:
Q  1 tgttgacccagttcagccaatatggcctaatctggg--agagagcagctctccaatccaatatga-gaaagtgttacaaaagg-ttgcaagaagctctag 96  Q
    ||||||||||||||| ||||||||||||||||||||  ||||||||||||||||||||||||| | ||||||||||||||||| || |||||| |  |||    
T  18870653 tgttgacccagttcatccaatatggcctaatctgggggagagagcagctctccaatccaatataatgaaagtgttacaaaagggttacaagaaacaatag 18870554  T
Q  97 ctatcaagctttacacaaga-cagaccctagattctaccctttggtgtttccccactctcacaagatgaaccctaaaagagaagtcactagaggaagctt 195  Q
    |  |||||||| |||||||| || |||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||| |||||||||||||||    
T  18870553 cattcaagctt-acacaagaacaaaccctagattctaccctttggtatttccccactctcacaatatgaaccctaaaagagaagacactagaggaagctt 18870455  T
Q  196 taaatccttccaaccaatgaactcctcactacccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacccattggtt 295  Q
    || ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  18870454 tagatccttccaactaatgaactcctcactacccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaaccctttggtt 18870355  T
Q  296 ccctcctttg 305  Q
    ||||||||||    
T  18870354 ccctcctttg 18870345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 203; E-Value: 1e-111
Query Start/End: Original strand, 1 - 305
Target Start/End: Complemental strand, 18853259 - 18852951
Alignment:
Q  1 tgttgacccagttcagccaatatggcctaatctggg--agagagcagctctccaatccaatatga-gaaagtgttacaaaagg-ttgcaagaagctctag 96  Q
    ||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||| | ||||||||||||||||| || |||||| |  |||    
T  18853259 tgttgacccagttcagccaatatggcctaatctgggggagagagcagctctccaatccaatataatgaaagtgttacaaaagggttacaagaaacaatag 18853160  T
Q  97 ctatcaagctttacacaaga-cagaccctagattctaccctttggtgtttccccactctcacaagatgaaccctaaaagagaagtcactagaggaagctt 195  Q
    |  |||||||| |||||||| || |||||||||| ||||||||||| ||||||||||||||||| ||||||||||||||||||| |||||||||||||||    
T  18853159 cattcaagctt-acacaagaacaaaccctagattttaccctttggtatttccccactctcacaatatgaaccctaaaagagaagacactagaggaagctt 18853061  T
Q  196 taaatccttccaaccaatgaactcctcactacccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacccattggtt 295  Q
    || ||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  18853060 tagatccttccaactaatgaactcctcactacccaaggtgattacaatatttttcccaacccaagagacactctcaacaaagacactcaaccctttggtt 18852961  T
Q  296 ccctcctttg 305  Q
    ||||||||||    
T  18852960 ccctcctttg 18852951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 202; E-Value: 1e-110
Query Start/End: Original strand, 1 - 305
Target Start/End: Original strand, 36979383 - 36979689
Alignment:
Q  1 tgttgacccagttcagccaatatggcctaatctggg--agagagcagctctccaatccaatatga-gaaagtgttacaaaaggttgcaagaagctctagc 97  Q
    ||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||| |||||||||||||| |||| |||||| |  ||||    
T  36979383 tgttgacccagttcagccaatatggcctaatctgggggagagagcagctctccaatccaatatgatgaaagtgttacaaagggttacaagaaacaatagc 36979482  T
Q  98 tatcaagctttacacaaga-cagaccctagattctaccctttggtgtttccccactctcacaagatgaaccctaaaagagaagtcactagaggaagcttt 196  Q
      |||||||| |||||||| || |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||    
T  36979483 cttcaagctt-acacaagaacaaaccctagattctaccctttggtgtttccccactctcacaatatgaaccctaaaagagaagacactagaggaagcttt 36979581  T
Q  197 aaatccttccaaccaatgaactcctcactacccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacccattggttc 296  Q
    | ||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||| ||||||||||||||||| |||||||    
T  36979582 agatccttccaactaatgaactcctcactacccaaggtgattacaatg-ttttcccaacctaagagacactctctacaaagacactcaaccctttggttc 36979680  T
Q  297 cctcctttg 305  Q
    ||| |||||    
T  36979681 ccttctttg 36979689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 201; E-Value: 1e-109
Query Start/End: Original strand, 1 - 305
Target Start/End: Complemental strand, 33037897 - 33037592
Alignment:
Q  1 tgttgacccagttcagccaatatggcctaatctggg--agagagcagctctccaatccaatatgagaaagtgttacaaaaggttgcaagaagctctagct 98  Q
    ||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||| |||| |||||| |  ||||     
T  33037897 tgttgacccagttcagccaatatggcctaatctgggggagagagcagctctccaatccaatatgagaaagtgttacaaagggttacaagaaacaatagcc 33037798  T
Q  99 atcaagctttacacaaga-cagaccctagattctaccctttggtgtttccccactctcacaagatgaaccctaaaagagaagtcactagaggaagcttta 197  Q
     |||||||| |||||||| || |||||||||||||||| |  |||||||||||||||||||| |||||||||||| |||||| |||||||||||||||||    
T  33037797 ttcaagctt-acacaagaacaaaccctagattctacccatatgtgtttccccactctcacaatatgaaccctaaa-gagaagacactagaggaagcttta 33037700  T
Q  198 aatccttccaaccaatgaactcctcactacccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacccattggttcc 297  Q
     ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||| ||||||||    
T  33037699 gatccttccaactaatgaactcctcactacccaaggtgattacaatgtttttcccaacccaagagacactctctacgaagacactcaaccctttggttcc 33037600  T
Q  298 ctcctttg 305  Q
    ||||||||    
T  33037599 ctcctttg 33037592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 184; E-Value: 1e-99
Query Start/End: Original strand, 1 - 306
Target Start/End: Complemental strand, 4760166 - 4759857
Alignment:
Q  1 tgttgacccagttcagccaatatggcctaatctggg--agagagcagctctccaatccaatatga-gaaagtgttacaaaaggttgcaagaagctctagc 97  Q
    ||||||||||||||||||||||||||||||| ||||  ||||||||||||||||||||||||||| |||||||||||||| |||| |||||| |  ||||    
T  4760166 tgttgacccagttcagccaatatggcctaatatgggggagagagcagctctccaatccaatatgatgaaagtgttacaaagggttacaagaaacaatagc 4760067  T
Q  98 tatcaagctttacacaaga-cagaccctagattctaccctttggtgtttccccactctcacaagatgaaccctaaaagagaagtcactagaggaagcttt 196  Q
      |||||||| |||||||| ||  ||||||||||||||| |  |||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||    
T  4760066 cttcaagctt-acacaagaacaagccctagattctacccatatgtgtttccccactctcacaatatgaaccctaaaagagaagacactagaggaagcttt 4759968  T
Q  197 aaatccttccaaccaatgaactcctcactacccaaggtgattacaatgt-ttttcccaacccaagagacactctcaacaaagacactcaacccattggtt 295  Q
    | ||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||| ||||||||||||||||| ||||||    
T  4759967 agatccttccaactaatgaactcctcactacccaaggtgattacaatgttttttcccaacccaagagactctctctacaaagacactcaaccctttggtt 4759868  T
Q  296 ccctcctttgc 306  Q
     ||||||||||    
T  4759867 acctcctttgc 4759857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 182; E-Value: 2e-98
Query Start/End: Original strand, 1 - 305
Target Start/End: Complemental strand, 10689234 - 10688924
Alignment:
Q  1 tgttgacccagttcagccaatatggcctaatctggg--agagagcagctctccaatccaatatga-gaaagtgttacaaaaggttgcaagaagctctagc 97  Q
    ||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||| |||||||||||| | |||| |||||| |  ||||    
T  10689234 tgttgacccagttcagccaatatggcctaatctgggggagagagcagctctccaatccaatatgatgaaagtgttacagagggttacaagaaacaatagc 10689135  T
Q  98 tatcaagctttacacaaga-cagaccctagattctaccctt-tggtgtttccccactctcacaagatgaaccctaaaagagaagtcactagaggaagctt 195  Q
      |||||||| |||||||| ||  ||||||||||||||| | || ||||||||||||||||||| ||||||||||||||||||| |||||||||||||||    
T  10689134 cttcaagctt-acacaagaacaagccctagattctacccatatgttgtttccccactctcacaatatgaaccctaaaagagaagacactagaggaagctt 10689036  T
Q  196 taaatccttcc--aaccaatgaactcctcactacccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacccattgg 293  Q
    || ||||| ||  ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||    
T  10689035 tagatcctcccccaactaatgaactcctcactacccaaggtgattacaatgtttttcccaacccaagagacactctctacaaagacactcaaccctttgg 10688936  T
Q  294 ttccctcctttg 305  Q
    ||||||||||||    
T  10688935 ttccctcctttg 10688924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 138; E-Value: 4e-72
Query Start/End: Original strand, 1 - 305
Target Start/End: Complemental strand, 1262045 - 1261741
Alignment:
Q  1 tgttgacccagttcagccaatatggcctaatctggg--agagagcagctctccaatccaatatga-gaaagtgttacaaaaggttgcaagaagctctagc 97  Q
    ||||||||||||||| |||||||| |||||||||||  ||||||||||||||||||||| ||||| |||||||||||||| |||| ||||||    ||||    
T  1262045 tgttgacccagttcaaccaatatgacctaatctgggggagagagcagctctccaatccactatgatgaaagtgttacaaagggttacaagaaaaa-tagc 1261947  T
Q  98 tatcaagctttacacaag-acagaccctagattctaccctttggtgtttccccactctcacaagatgaaccctaaaagagaagtcactagaggaagcttt 196  Q
    |  ||||||| ||||||| |||   |||||||||||||| || |||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||    
T  1261946 ttgcaagctt-acacaagtacaagacctagattctacccatttgtgtttccccactctcacaatatgaaccctaaaagagaagacactagaggaagcttt 1261848  T
Q  197 aaatccttccaaccaatgaactcctcactacccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacccattggttc 296  Q
    | ||||||||||    |||| | ||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||    ||||    
T  1261847 agatccttccaa-tggtgaaat-ctcactacccaaggtgattacaatgtttttcccaacccaagagaccctctctacaaagacactcaaccctagagttc 1261750  T
Q  297 cctcctttg 305  Q
    |||||||||    
T  1261749 cctcctttg 1261741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 1 - 173
Target Start/End: Complemental strand, 25328357 - 25328184
Alignment:
Q  1 tgttgacccagttcagccaatatggcctaatctggg--agagagcagctctccaatccaatatgagaaagtgttacaaaaggttgcaagaagctctagct 98  Q
    ||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||| |||||  |||||||     
T  25328357 tgttgacccagttcagccaatatggcctaatctgggggagagagcagctctccaatccaatatgagaaagtgttacaaaaggttacaaga--ctctagcc 25328260  T
Q  99 atcaagctttacacaag-acagaccctagattctaccctttggtgtttccccactctcacaagatgaaccctaaaa 173  Q
     |||||||||||||| | ||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  25328259 ttcaagctttacacatgaacaaaccctagattctaccctttggtgtttccccactctcacaacatgaaccctaaaa 25328184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 121; E-Value: 5e-62
Query Start/End: Original strand, 1 - 173
Target Start/End: Complemental strand, 7290005 - 7289831
Alignment:
Q  1 tgttgacccagttcagccaatatggcctaatctggg--agagagcagctctccaatccaatatgagaaagtgttacaaaaggttgcaagaagctctagct 98  Q
    ||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||     
T  7290005 tgttgacccagttcagccaatatggcctaatctgggggagagagcagctctccaatccaatatgagaaagtgttacaaaaggttacaagaa-ctctagcc 7289907  T
Q  99 atcaagctttacacaag-acagaccctagattctaccctttggtgtttccccactctcacaagatgaaccctaaaa 173  Q
     |||||||||||||| | ||| |||||| ||||||||||||||||||||||||||||||||| |||||||||||||    
T  7289906 ttcaagctttacacatgaacaaaccctatattctaccctttggtgtttccccactctcacaatatgaaccctaaaa 7289831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 1 - 286
Target Start/End: Complemental strand, 31071321 - 31071035
Alignment:
Q  1 tgttgacccagttcag-ccaatatggcctaatctggg--agagagcagctctccaatccaatatga-gaaagtgttacaaaaggttgcaagaagctctag 96  Q
    |||||||| ||||| | |||||||| |||||||||||  ||||||||||||||||||||| ||||| |||||||||||||| |||| ||||||    |||    
T  31071321 tgttgaccgagttcggtccaatatgacctaatctgggggagagagcagctctccaatccactatgatgaaagtgttacaaagggttacaagaaaaa-tag 31071223  T
Q  97 ctatcaagctttacacaaga-cagaccctagattctaccctttggtgtttccccactctcacaagatgaaccctaaaagagaagtcactagaggaagctt 195  Q
    ||  ||||||| |||||||| ||   ||||| |||||||| || |||||||||||||||||||| ||||||||||||||||||| ||| |||||||||||    
T  31071222 cttgcaagctt-acacaagaacaagtcctagtttctacccatttgtgtttccccactctcacaatatgaaccctaaaagagaagacacaagaggaagctt 31071124  T
Q  196 taaatccttccaaccaatgaactcctcactacccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaac 286  Q
     | ||||||||||    |||| | |||||||||||||||| |||||||||||||||||||||||||||  ||| | |||||||||||||||    
T  31071123 aagatccttccaa-tggtgaaat-ctcactacccaaggtgtttacaatgtttttcccaacccaagagatcctcactacaaagacactcaac 31071035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 1 - 288
Target Start/End: Original strand, 26287907 - 26288183
Alignment:
Q  1 tgttgacccagttcagccaatatggcctaatct--gggagagagcagctctccaatccaatatga-gaaagtgttacaaaaggttgcaagaagctctagc 97  Q
    |||||||||||||||||||||||||||||||||  |||||||||||||||||||||||| ||||| |||||||||||||      | || |     ||||    
T  26287907 tgttgacccagttcagccaatatggcctaatctgggggagagagcagctctccaatccactatgatgaaagtgttacaa------gaaaaa-----tagc 26287995  T
Q  98 tatcaagctttacacaag-acagaccctagattctaccctttggtgtttccccactctcacaagatgaaccctaaaagagaagtcactagaggaagcttt 196  Q
    |  ||||| ||||||||| |||   ||||| |||||||| || ||| |||||||||||||||| ||||||||||||||||||| ||| ||||||||||||    
T  26287996 ttgcaagc-ttacacaagaacaagtcctagtttctacccatttgtg-ttccccactctcacaatatgaaccctaaaagagaagacacaagaggaagcttt 26288093  T
Q  197 aaatccttccaaccaatgaactcctcactacccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaaccc 288  Q
    | ||||||||||    |||| | |||||||||||||||| ||||||||||||||||||| |||||||  ||||| ||||||||| |||||||    
T  26288094 agatccttccaa-tggtgaaat-ctcactacccaaggtgtttacaatgtttttcccaactcaagagattctctctacaaagacattcaaccc 26288183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 1 - 288
Target Start/End: Original strand, 26301164 - 26301440
Alignment:
Q  1 tgttgacccagttcagccaatatggcctaatct--gggagagagcagctctccaatccaatatga-gaaagtgttacaaaaggttgcaagaagctctagc 97  Q
    |||||||||||||||||||||||||||||||||  |||||||||||||||||||||||| ||||| |||||||||||||      | || |     ||||    
T  26301164 tgttgacccagttcagccaatatggcctaatctgggggagagagcagctctccaatccactatgatgaaagtgttacaa------gaaaaa-----tagc 26301252  T
Q  98 tatcaagctttacacaag-acagaccctagattctaccctttggtgtttccccactctcacaagatgaaccctaaaagagaagtcactagaggaagcttt 196  Q
    |  ||||| ||||||||| |||   ||||| |||||||| || ||| |||||||||||||||| ||||||||||||||||||| ||| ||||||||||||    
T  26301253 ttgcaagc-ttacacaagaacaagtcctagtttctacccatttgtg-ttccccactctcacaatatgaaccctaaaagagaagacacaagaggaagcttt 26301350  T
Q  197 aaatccttccaaccaatgaactcctcactacccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaaccc 288  Q
    | ||||||||||    |||| | |||||||||||||||| ||||||||||||||||||| |||||||  ||||| ||||||||| |||||||    
T  26301351 agatccttccaa-tggtgaaat-ctcactacccaaggtgtttacaatgtttttcccaactcaagagattctctctacaaagacattcaaccc 26301440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 1 - 288
Target Start/End: Original strand, 26313158 - 26313434
Alignment:
Q  1 tgttgacccagttcagccaatatggcctaatct--gggagagagcagctctccaatccaatatga-gaaagtgttacaaaaggttgcaagaagctctagc 97  Q
    |||||||||||||||||||||||||||||||||  |||||||||||||||||||||||| ||||| |||||||||||||      | || |     ||||    
T  26313158 tgttgacccagttcagccaatatggcctaatctgggggagagagcagctctccaatccactatgatgaaagtgttacaa------gaaaaa-----tagc 26313246  T
Q  98 tatcaagctttacacaag-acagaccctagattctaccctttggtgtttccccactctcacaagatgaaccctaaaagagaagtcactagaggaagcttt 196  Q
    |  ||||| ||||||||| |||   ||||| |||||||| || ||| |||||||||||||||| ||||||||||||||||||| ||| ||||||||||||    
T  26313247 ttgcaagc-ttacacaagaacaagtcctagtttctacccatttgtg-ttccccactctcacaatatgaaccctaaaagagaagacacaagaggaagcttt 26313344  T
Q  197 aaatccttccaaccaatgaactcctcactacccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaaccc 288  Q
    | ||||||||||    |||| | |||||||||||||||| ||||||||||||||||||| |||||||  ||||| ||||||||| |||||||    
T  26313345 agatccttccaa-tggtgaaat-ctcactacccaaggtgtttacaatgtttttcccaactcaagagattctctctacaaagacattcaaccc 26313434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 226 - 307
Target Start/End: Complemental strand, 7289831 - 7289750
Alignment:
Q  226 acccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacccattggttccctcctttgct 307  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7289831 acccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacccattggttccctcctttgct 7289750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 1 - 168
Target Start/End: Complemental strand, 39784901 - 39784734
Alignment:
Q  1 tgttgacccagttcagccaatatggcctaatct--gggagagagcagctctccaatccaatatgagaaagtgttacaaaaggttgcaagaagctctagc- 97  Q
    |||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||| | ||||||||||||||||| |||||  |||||||     
T  39784901 tgttgacccagttcagccaatatggcctaatctgggggagagagcagctctccaatccaatatgtg-aagtgttacaaaaggttacaaga--ctctagct 39784805  T
Q  98 tatcaagctttacacaag-acagaccctagattctaccctttggtgtttccccactctcacaagatgaaccc 168  Q
    |||||||||||||||| | ||| ||||||||  |||||||||||| ||| ||||||||||||  ||||||||    
T  39784804 tatcaagctttacacatgaacaaaccctaga-actaccctttggtattttcccactctcacactatgaaccc 39784734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 10684343 - 10684224
Alignment:
Q  1 tgttgacccagttcagccaatatggcctaatctggg--agagagcagctctccaatccaatatgagaaagtgttacaaaag-gttgcaagaagctctagc 97  Q
    ||||||||||||||||||||| ||||||||||||||  |||||||||||||||||||||||||| ||| |||||||||||| ||| ||||||  ||||||    
T  10684343 tgttgacccagttcagccaatgtggcctaatctgggggagagagcagctctccaatccaatatgtgaatgtgttacaaaagagttacaagaa--tctagc 10684246  T
Q  98 -tatcaagctttacacaagaca 118  Q
     |||||||||||||||||||||    
T  10684245 ttatcaagctttacacaagaca 10684224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 1 - 168
Target Start/End: Original strand, 35745397 - 35745566
Alignment:
Q  1 tgttgacccagttcagccaatatggcctaatctggg--agagagcagctctccaatccaatatgagaaagtgttacaaaag-gttgcaagaagctctagc 97  Q
    ||||||||||||||||||||| ||||||||||||||  |||||||||||||||||||||||||| ||| |||||||||||| ||| ||||||  ||||||    
T  35745397 tgttgacccagttcagccaatgtggcctaatctgggggagagagcagctctccaatccaatatgtgaatgtgttacaaaagagttacaagaa--tctagc 35745494  T
Q  98 -tatcaagctttacacaag-acagaccctagattctaccctttggtgtttccccactctcacaagatgaaccc 168  Q
     | |||||||||||||| | ||| ||||||||  |||||||||||| ||| ||||| ||||||  ||||||||    
T  35745495 ttttcaagctttacacatgaacaaaccctaga-cctaccctttggtattttcccaccctcacactatgaaccc 35745566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 226 - 305
Target Start/End: Complemental strand, 25328058 - 25327979
Alignment:
Q  226 acccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacccattggttccctcctttg 305  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||| || |||||||||||    
T  25328058 acccaaggtgattacaatgtttttcccaacccaagagacactctcatcaaagacacacaacccataggatccctcctttg 25327979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 226 - 305
Target Start/End: Complemental strand, 25328184 - 25328105
Alignment:
Q  226 acccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacccattggttccctcctttg 305  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||| || |||||||||||    
T  25328184 acccaaggtgattacaatgtttttcccaacccaagagacactctcatcaaagacacacaacccataggatccctcctttg 25328105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 17 - 288
Target Start/End: Original strand, 4456050 - 4456317
Alignment:
Q  17 ccaatatggcctaatctggg--agagagcagctctccaatccaatatga-gaaagtgttacaaaaggttgcaagaagctctagctatcaagctttacaca 113  Q
    ||||||||||||||||||||  ||||||||||||||||||||| ||||| ||||||||||||||  ||| ||||||    |||||  ||||| |||||||    
T  4456050 ccaatatggcctaatctgggggagagagcagctctccaatccactatgatgaaagtgttacaaagagttacaagaa--aatagctggcaagc-ttacaca 4456146  T
Q  114 ag-acagaccctagattctaccctttggtgtttccccactctcacaa-gatgaaccctaaaagagaagtcactagaggaagctttaaatccttccaacca 211  Q
    || |||   | ||  |||||||| || ||| || ||||||||| ||| |||||||||| ||||||||| ||| | ||||||||||  ||||||| ||       
T  4456147 agaacaagacataatttctacccatttgtg-ttacccactctctcaatgatgaaccct-aaagagaagacacaaaaggaagcttttgatccttctaa-tg 4456243  T
Q  212 atgaactcctcactacccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaaccc 288  Q
     |||| | |||||||||||||||| ||||||||  |||||||||||||||||  ||| | ||| |||||||||||||    
T  4456244 gtgaaat-ctcactacccaaggtgtttacaatg--tttcccaacccaagagatcctcactacagagacactcaaccc 4456317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 26403322 - 26403240
Alignment:
Q  1 tgttgacccagttcag-ccaatatggcctaatctggg--agagagcagctctccaatccaatatga-gaaagtgttacaaaag 79  Q
    |||||||||||||| | |||||||| |||||||||||  ||||||||||||||||||||| ||||| ||||||||||||||||    
T  26403322 tgttgacccagttcggtccaatatgacctaatctgggggagagagcagctctccaatccactatgatgaaagtgttacaaaag 26403240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 220 - 288
Target Start/End: Original strand, 7412563 - 7412629
Alignment:
Q  220 ctcactacccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaaccc 288  Q
    |||||||||||||||| |||||||||||  ||||||||||||||  ||||| |||||||||||||||||    
T  7412563 ctcactacccaaggtgtttacaatgttt--cccaacccaagagatcctctctacaaagacactcaaccc 7412629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 227 - 290
Target Start/End: Complemental strand, 39784728 - 39784665
Alignment:
Q  227 cccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacccat 290  Q
    |||||||||||||||||||||||||||||| ||||||| |||||| ||||| ||| || |||||    
T  39784728 cccaaggtgattacaatgtttttcccaacctaagagactctctcatcaaaggcacacaccccat 39784665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 220 - 288
Target Start/End: Complemental strand, 4696482 - 4696416
Alignment:
Q  220 ctcactacccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaaccc 288  Q
    |||||||||||||||| |||||||||||  ||||||||||||||  ||| | |||||||||||||||||    
T  4696482 ctcactacccaaggtgtttacaatgttt--cccaacccaagagatcctcactacaaagacactcaaccc 4696416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 7412346 - 7412426
Alignment:
Q  1 tgttgacccagttcag-ccaatatggcctaatctggg--agagagcagctctccaatccaatatga-gaaagtgttacaaa 77  Q
    |||||||||||||| | |||||||| |||||| ||||  ||||||||||||||||||||| ||||| ||||||||||||||    
T  7412346 tgttgacccagttcggtccaatatgacctaatatgggggagagagcagctctccaatccactatgatgaaagtgttacaaa 7412426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 288
Target Start/End: Complemental strand, 19175846 - 19175562
Alignment:
Q  1 tgttgacccagttcag-ccaatatggcctaatctggg--agagagcagctctccaatccaatatga-gaaagtgttacaaaaggttgcaagaagctctag 96  Q
    |||||||| ||||| | |||||||| |||||||||||  |||||||| |||||||||||| ||||| ||||||||||||||  ||| ||||||    |||    
T  19175846 tgttgacctagttcggtccaatatgacctaatctgggggagagagcaactctccaatccactatgatgaaagtgttacaaagagttacaagaaaaa-tag 19175748  T
Q  97 ctatcaagctttacacaaga-cagaccctagattctaccctttggtgtttccccactctcacaa-gatgaaccctaaaagagaagtcactagaggaagct 194  Q
    |   ||||||| |||||||| ||   ||||  |||||| | || ||||||||| |||||| ||| ||||||||||||  |||||| ||| | ||||| ||    
T  19175747 cctgcaagctt-acacaagaacaagacctaacttctacacatttgtgtttccc-actctctcaatgatgaaccctaa--gagaagacacaaaaggaaact 19175652  T
Q  195 ttaaatccttccaaccaatgaactcctcactacccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaaccc 288  Q
    ||  ||||||||||  | |||| || ||||||||||||||| ||||||||  |||||||| ||||||||  ||| | |||||||||||||||||    
T  19175651 tttgatccttccaat-agtgaaatc-tcactacccaaggtgtttacaatg--tttcccaatccaagagatcctcactacaaagacactcaaccc 19175562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 6127226 - 6127308
Alignment:
Q  1 tgttgacccagttcag-ccaatatggcctaatctggg--agagagcagctctccaatccaatatga-gaaagtgttacaaaag 79  Q
    ||||||| |||||| | |||||||| |||||| ||||  ||||||||||||||||||||| ||||| ||||||||||||||||    
T  6127226 tgttgactcagttcggtccaatatgacctaatttggggaagagagcagctctccaatccactatgatgaaagtgttacaaaag 6127308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 23799669 - 23799587
Alignment:
Q  1 tgttgacccagttcag-ccaatatggcctaatctgg--gagagagcagctctccaatccaatatga-gaaagtgttacaaaag 79  Q
    |||||||||||||| | |||||||| |||||| |||  ||||||||||| |||||||||| ||||| ||||||||||||||||    
T  23799669 tgttgacccagttcggtccaatatgacctaatttggaggagagagcagccctccaatccactatgatgaaagtgttacaaaag 23799587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 220 - 288
Target Start/End: Complemental strand, 5702354 - 5702288
Alignment:
Q  220 ctcactacccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaaccc 288  Q
    |||||||||||||||| ||||||| |||  ||||||||||||||  ||| | |||||||||||||||||    
T  5702354 ctcactacccaaggtgtttacaatattt--cccaacccaagagatcctcactacaaagacactcaaccc 5702288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 4696688 - 4696609
Alignment:
Q  1 tgttgacccagttc-agccaatatggcctaatctggg--agagagcagctctccaatccaatatga-gaaagtgttacaa 76  Q
    |||||||||||||| | |||||||| |||||||||||  |||||||||| |||||||||| ||||| ||||| |||||||    
T  4696688 tgttgacccagttcgatccaatatgacctaatctgggggagagagcagccctccaatccactatgatgaaagagttacaa 4696609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 9765911 - 9765852
Alignment:
Q  1 tgttgacccagttcag-ccaatatggcctaatctggg--agagagcagctctccaatcca 57  Q
    |||||||||||||| | |||||||| |||||||||||  |||||||||||||||||||||    
T  9765911 tgttgacccagttcggtccaatatgacctaatctgggggagagagcagctctccaatcca 9765852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 220 - 285
Target Start/End: Complemental strand, 9054294 - 9054231
Alignment:
Q  220 ctcactacccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaa 285  Q
    |||||||||||||||||||| ||||||||  |||||||||||||  ||| | ||||| ||||||||    
T  9054294 ctcactacccaaggtgattataatgtttt--ccaacccaagagaatctcactacaaaaacactcaa 9054231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 227 - 277
Target Start/End: Complemental strand, 10684168 - 10684116
Alignment:
Q  227 cccaaggtgattacaatgtt--tttcccaacccaagagacactctcaacaaag 277  Q
    ||||||||||||||||||||  |||||||||| |||| ||||||||| |||||    
T  10684168 cccaaggtgattacaatgttgttttcccaacctaagatacactctcatcaaag 10684116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 220 - 288
Target Start/End: Complemental strand, 19752268 - 19752202
Alignment:
Q  220 ctcactacccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaaccc 288  Q
    |||||||||||||||| ||||||| |||  | ||||||||||||  ||| | |||||||||||||||||    
T  19752268 ctcactacccaaggtgtttacaatattt--cacaacccaagagaacctcactacaaagacactcaaccc 19752202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 224 - 288
Target Start/End: Complemental strand, 23799446 - 23799384
Alignment:
Q  224 ctacccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaaccc 288  Q
    |||| ||||||| ||||||||||   ||||||||||||||  ||||| |||||||||||||||||    
T  23799446 ctactcaaggtgtttacaatgttc--cccaacccaagagatcctctctacaaagacactcaaccc 23799384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 227 - 277
Target Start/End: Original strand, 35745572 - 35745624
Alignment:
Q  227 cccaaggtgattacaatgt--ttttcccaacccaagagacactctcaacaaag 277  Q
    |||||||||||||||||||  ||||||||||| |||| ||||||||| |||||    
T  35745572 cccaaggtgattacaatgttgttttcccaacctaagaaacactctcatcaaag 35745624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 19752486 - 19752407
Alignment:
Q  1 tgttgacccagttcag-ccaatatggcctaatct--gggagagagcagctctccaatccaatatga-gaaagtgttacaa 76  Q
    |||||||| ||||| | |||||||| |||| |||  |||||||||||||||||||||||| || || |||||||||||||    
T  19752486 tgttgacctagttcggtccaatatgacctagtctaggggagagagcagctctccaatccactaagatgaaagtgttacaa 19752407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 220 - 288
Target Start/End: Complemental strand, 26403103 - 26403035
Alignment:
Q  220 ctcactacccaaggtgattacaatgtttttcccaacc--caagagacactctcaacaaagacactcaaccc 288  Q
    |||||||||||||||| ||||||||  ||||||||||  |||||||  ||| | |||||||||||||||||    
T  26403103 ctcactacccaaggtgtttacaatg--tttcccaaccctcaagagaacctcactacaaagacactcaaccc 26403035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 248; Significance: 1e-138; HSPs: 56)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 248; E-Value: 1e-138
Query Start/End: Original strand, 1 - 305
Target Start/End: Original strand, 31180220 - 31180526
Alignment:
Q  1 tgttgacccagttcagccaatatggcctaatctggg--agagagcagctctccaatccaatatgagaaagtgttacaaaaggttgcaagaagctctagct 98  Q
    ||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||| |||| |||||| |||||||     
T  31180220 tgttgacccagttcagccaatatggcctaatctgggggagagagcagctctccaatccaatatgagaaagtgttacaaagggttacaagaaactctagcc 31180319  T
Q  99 atcaagctttacacaagacagaccctagattctaccctttggtgtttccccactctcacaagatgaaccctaaaagagaagtcactagaggaagctttaa 198  Q
     ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||| |||||||||||||||||     
T  31180320 ttcaagctttacacaagacaaaccctagattctaccctttggtgtttccccactctcacaatatgaaccataaaagagaagacactagaggaagctttag 31180419  T
Q  199 atccttccaaccaatgaactcctcactacccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacccattggttccc 298  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  31180420 atccttccaactaatgaactcctcactacccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaaccctttggttccc 31180519  T
Q  299 tcctttg 305  Q
    |||||||    
T  31180520 tcctttg 31180526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 222; E-Value: 1e-122
Query Start/End: Original strand, 1 - 305
Target Start/End: Original strand, 30631412 - 30631719
Alignment:
Q  1 tgttgacccagttcagccaatatggcctaatctggg--agagagcagctctccaatccaatatgagaaagtgttacaaaaggttgcaagaagctctagct 98  Q
    ||||||| ||||||||||||| ||||||||||||||  ||||||||||||||||||||||||||||||||||||||||| |||| |||||| |||||||     
T  30631412 tgttgactcagttcagccaatgtggcctaatctgggggagagagcagctctccaatccaatatgagaaagtgttacaaagggttacaagaaactctagcc 30631511  T
Q  99 atcaagctttacacaaga-cagaccctagattctaccctttggtgtttccccactctcacaagatgaaccctaaaagagaagtcactagaggaagcttta 197  Q
     |||||||||||||| || || ||| |||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||    
T  30631512 ttcaagctttacacatgaacaaaccatagattctaccctttggtgtttccccactctcacaatatgaaccctaaa-gagaagtcactagaggaagcttta 30631610  T
Q  198 aatccttccaaccaatgaactcctc-actacccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacccattggttc 296  Q
     ||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30631611 gatccttccaactaatgaactcctccactacccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacccattggttc 30631710  T
Q  297 cctcctttg 305  Q
    |||||||||    
T  30631711 cctcctttg 30631719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 162; E-Value: 2e-86
Query Start/End: Original strand, 1 - 305
Target Start/End: Original strand, 24135854 - 24136159
Alignment:
Q  1 tgttgacccagttcagccaatatggcctaatctggg--agagagcagctctccaatccaatatga-gaaagtgttacaaaaggttgcaagaagctctagc 97  Q
    ||||||||||||||||||||||||||||||||||||  ||||||||||| |||||| || || || |||||||||||||| |||| ||||||    ||||    
T  24135854 tgttgacccagttcagccaatatggcctaatctgggggagagagcagctatccaatgcactaagatgaaagtgttacaaagggttacaagaaaaa-tagc 24135952  T
Q  98 tatcaagctttacacaaga-cagaccctagattctaccctttggtgtttccccactctcacaagatgaaccctaaaagagaagtcactagaggaagcttt 196  Q
    |  ||||||| |||||||| ||   ||||||||||||||||||||||||||||||||||||||  |||||||||||||||||| ||||||||||||||||    
T  24135953 ttgcaagctt-acacaagaacaagtcctagattctaccctttggtgtttccccactctcacaatgtgaaccctaaaagagaagacactagaggaagcttt 24136051  T
Q  197 aaatccttccaaccaatgaactcctcactacccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacccattggttc 296  Q
    | ||||||||||    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||| |||||||    
T  24136052 agatccttccaatgg-tgaactcctcactacccaaggtgattacaatgtttttcccaacccaagagacactttctacaaagacactcaaccctttggttc 24136150  T
Q  297 cctcctttg 305  Q
    |||||||||    
T  24136151 cctcctttg 24136159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 126; E-Value: 6e-65
Query Start/End: Original strand, 1 - 305
Target Start/End: Original strand, 38219404 - 38219708
Alignment:
Q  1 tgttgacccagttcagccaatatggcctaatct--gggagagagcagctctccaatccaatatga-gaaagtgttacaaaaggttgcaagaagctctagc 97  Q
    |||||||||||||||||||||||||||||||||  |||||||||||||||||||||||| ||||| |||||||||||||| |||| ||||||    ||||    
T  38219404 tgttgacccagttcagccaatatggcctaatctgggggagagagcagctctccaatccactatgatgaaagtgttacaaagggttacaagaa-aaatagc 38219502  T
Q  98 tatcaagctttacacaag-acagaccctagattctaccctttggtgtttccccactctcacaagatgaaccctaaaagagaagtcactagaggaagcttt 196  Q
    |  ||||| ||||||||| |||   ||||| |||||||| || |||||||||||||||||||| ||||||||||||||||||| ||| ||||||||||||    
T  38219503 ttgcaagc-ttacacaagaacaagtcctagtttctacccatttgtgtttccccactctcacaatatgaaccctaaaagagaagacacaagaggaagcttt 38219601  T
Q  197 aaatccttccaaccaatgaactcctcactacccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacccattggttc 296  Q
    | ||||||||||    |||| | |||||||||||||||| |||||||||||||||||||||||||||  ||| | |||||||||||||||||    ||||    
T  38219602 agatccttccaa-tggtgaaat-ctcactacccaaggtgtttacaatgtttttcccaacccaagagatcctcactacaaagacactcaaccctagagttc 38219699  T
Q  297 cctcctttg 305  Q
    |||||||||    
T  38219700 cctcctttg 38219708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 1 - 305
Target Start/End: Original strand, 35387668 - 35387972
Alignment:
Q  1 tgttgacccagttcagccaatatggcctaatctggg--agagagcagctctccaatccaatatga-gaaagtgttacaaaaggttgcaagaagctctagc 97  Q
    |||||||||| |||||||||||||||||||||||||  ||||||||||||||||||| | ||||| |||||||||||||| |||| ||||||    ||||    
T  35387668 tgttgacccaattcagccaatatggcctaatctgggggagagagcagctctccaatctactatgatgaaagtgttacaaagggttacaagaaaaa-tagc 35387766  T
Q  98 tatcaagctttacacaagacagac-cctagattctaccctttggtgtttccccactctcacaagatgaaccctaaaagagaagtcactagaggaagcttt 196  Q
    |  ||||||| ||||||||   |  ||||| |||||||| || |||||||||||||||||||| ||||||||||||||||||| |||||||||||| |||    
T  35387767 ttgcaagctt-acacaagaataagtcctagtttctacccatttgtgtttccccactctcacaatatgaaccctaaaagagaagacactagaggaagtttt 35387865  T
Q  197 aaatccttccaaccaatgaactcctcactacccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacccattggttc 296  Q
    | ||||||||||    |||| | |||||||||||||||||||||||||||||| |||||||||||||| ||||| |||||||||||||||||    ||||    
T  35387866 agatccttccaa-tggtgaaat-ctcactacccaaggtgattacaatgttttttccaacccaagagaccctctctacaaagacactcaaccctagagttc 35387963  T
Q  297 cctcctttg 305  Q
    |||||||||    
T  35387964 cctcctttg 35387972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 121; E-Value: 5e-62
Query Start/End: Original strand, 1 - 173
Target Start/End: Complemental strand, 1457241 - 1457067
Alignment:
Q  1 tgttgacccagttcagccaatatggcctaatctggg--agagagcagctctccaatccaatatgagaaagtgttacaaaaggttgcaagaagctctagct 98  Q
    ||||||||||||||||||||| ||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||     
T  1457241 tgttgacccagttcagccaatgtggcctaatctgggggagagagcagctctccaatccaatatgagaaagtgttacaaaaggttacaagaa-ctctagcc 1457143  T
Q  99 atcaagctttacacaag-acagaccctagattctaccctttggtgtttccccactctcacaagatgaaccctaaaa 173  Q
     |||||||||||||| | ||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  1457142 ttcaagctttacacatgaacaaaccctagattctaccctttggtgtttccccactctcacaatatgaaccctaaaa 1457067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 1 - 173
Target Start/End: Original strand, 43592285 - 43592459
Alignment:
Q  1 tgttgacccagttcagccaatatggcctaatctggg--agagagcagctctccaatccaatatgagaaagtgttacaaaaggttgcaagaagctctagct 98  Q
    ||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||     
T  43592285 tgttgacccagttcagccaatatggcctaatctgggggagagagcagctctccaatccaatatgagaaagtgttacaaaaggttacaagaa-ctctagcc 43592383  T
Q  99 atcaagctttacacaag-acagaccctagattctaccctttggtgtttccccactctcacaagatgaaccctaaaa 173  Q
     |||||||||||||| | ||| ||||||||||||||||||||||||||||||||||||  || |||||||||||||    
T  43592384 ttcaagctttacacatgaacaaaccctagattctaccctttggtgtttccccactctcttaatatgaaccctaaaa 43592459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 1 - 173
Target Start/End: Original strand, 27449820 - 27449994
Alignment:
Q  1 tgttgacccagttcagccaatatggcctaatctggg--agagagcagctctccaatccaatatgagaaagtgttacaaaaggttgcaagaagctctagct 98  Q
    ||||||||||||||||||||||| ||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||     
T  27449820 tgttgacccagttcagccaatatagcctaatctgggggagagagcagctctccaatccaatatgagaaagtgttacaaaaggttacaagaa-ctctagcc 27449918  T
Q  99 atcaagctttacacaag-acagaccctagattctaccctttggtgtttccccactctcacaagatgaaccctaaaa 173  Q
     |||||||||||||| | ||| ||||||||||||||||||||||||||||||||||||  || |||||||||||||    
T  27449919 ttcaagctttacacatgaacaaaccctagattctaccctttggtgtttccccactctcttaatatgaaccctaaaa 27449994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 1 - 173
Target Start/End: Original strand, 15044692 - 15044865
Alignment:
Q  1 tgttgacccagttcagccaatatggcctaatctggg--agagagcagctctccaatccaatatgagaaagtgttacaaaaggttgcaagaagctctagct 98  Q
    ||||||||||||||||||||||||||||||| ||||  |||||||||||||||||||||||||||||||||||||||||||||| |||||  ||||||||    
T  15044692 tgttgacccagttcagccaatatggcctaatatgggggagagagcagctctccaatccaatatgagaaagtgttacaaaaggttacaaga--ctctagct 15044789  T
Q  99 atcaagctttacacaag-acagaccctagattctaccctttggtgtttccccactctcacaagatgaaccctaaaa 173  Q
     |||||||||||||| | ||| |||||||||||||||||||||| ||| ||||||||||||  |||||||||||||    
T  15044790 ttcaagctttacacatgaacaaaccctagattctaccctttggtattttcccactctcacactatgaaccctaaaa 15044865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 8 - 173
Target Start/End: Original strand, 43598737 - 43598904
Alignment:
Q  8 ccagttcagccaatatggcctaatctggg--agagagcagctctccaatccaatatgagaaagtgttacaaaaggttgcaagaagctctagctatcaagc 105  Q
    |||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||  ||||||    
T  43598737 ccagttcagccaatatggcctaatctgggggagagagcagctctccaatccaatatgagaaagtgttacaaaaggttacaagaa-ctctagccttcaagc 43598835  T
Q  106 tttacacaag-acagaccctagattctaccctttggtgtttccccactctcacaagatgaaccctaaaa 173  Q
    |||||||| | ||| ||||||||||||||||||||||||||||||||||||  || |||||||||||||    
T  43598836 tttacacatgaacaaaccctagattctaccctttggtgtttccccactctcttaatatgaaccctaaaa 43598904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 8 - 173
Target Start/End: Original strand, 43604229 - 43604396
Alignment:
Q  8 ccagttcagccaatatggcctaatctggg--agagagcagctctccaatccaatatgagaaagtgttacaaaaggttgcaagaagctctagctatcaagc 105  Q
    |||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||  ||||||    
T  43604229 ccagttcagccaatatggcctaatctgggggagagagcagctctccaatccaatatgagaaagtgttacaaaaggttacaagaa-ctctagccttcaagc 43604327  T
Q  106 tttacacaag-acagaccctagattctaccctttggtgtttccccactctcacaagatgaaccctaaaa 173  Q
    |||||||| | ||| ||||||||||||||||||||||||||||||||||||  || |||||||||||||    
T  43604328 tttacacatgaacaaaccctagattctaccctttggtgtttccccactctcttaatatgaaccctaaaa 43604396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 8 - 173
Target Start/End: Original strand, 43609721 - 43609888
Alignment:
Q  8 ccagttcagccaatatggcctaatctggg--agagagcagctctccaatccaatatgagaaagtgttacaaaaggttgcaagaagctctagctatcaagc 105  Q
    |||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||  ||||||    
T  43609721 ccagttcagccaatatggcctaatctgggggagagagcagctctccaatccaatatgagaaagtgttacaaaaggttacaagaa-ctctagccttcaagc 43609819  T
Q  106 tttacacaag-acagaccctagattctaccctttggtgtttccccactctcacaagatgaaccctaaaa 173  Q
    |||||||| | ||| ||||||||||||||||||||||||||||||||||||  || |||||||||||||    
T  43609820 tttacacatgaacaaaccctagattctaccctttggtgtttccccactctcttaatatgaaccctaaaa 43609888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 109; E-Value: 8e-55
Query Start/End: Original strand, 1 - 173
Target Start/End: Original strand, 27444976 - 27445150
Alignment:
Q  1 tgttgacccagttcagccaatatggcctaatctggg--agagagcagctctccaatccaatatgagaaagtgttacaaaaggttgcaagaagctctagct 98  Q
    |||||||||||||||| |||||| ||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||     
T  27444976 tgttgacccagttcaggcaatatagcctaatctgggggagagagcagctctccaatccaatatgagaaagtgttacaaaaggttacaagaa-ctctagcc 27445074  T
Q  99 atcaagctttacacaag-acagaccctagattctaccctttggtgtttccccactctcacaagatgaaccctaaaa 173  Q
     |||||||||||||| | ||| ||||||||||||||||||||||||||||||||||||  || |||||||||||||    
T  27445075 ttcaagctttacacatgaacaaaccctagattctaccctttggtgtttccccactctcttaatatgaaccctaaaa 27445150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 1 - 168
Target Start/End: Complemental strand, 28807651 - 28807485
Alignment:
Q  1 tgttgacccagttcagccaatatggcctaatct--gggagagagcagctctccaatccaatatgagaaagtgttacaaaaggttgcaagaagctctagct 98  Q
    ||||||||||||||||||||| |||||||||||  ||||||||||||||||||||||||||||| | ||||||||||||||||| ||||||  |||||||    
T  28807651 tgttgacccagttcagccaatgtggcctaatctgggggagagagcagctctccaatccaatatgtg-aagtgttacaaaaggttacaagaa--tctagct 28807555  T
Q  99 atcaagctttacacaag-acagaccctagattctaccctttggtgtttccccactctcacaagatgaaccc 168  Q
     |||||||||||||| | ||| |||||||| ||||||||||||| ||| ||||||||||||  ||||||||    
T  28807554 ttcaagctttacacatgaacaaaccctaga-tctaccctttggtattttcccactctcacactatgaaccc 28807485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 226 - 307
Target Start/End: Complemental strand, 1457067 - 1456986
Alignment:
Q  226 acccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacccattggttccctcctttgct 307  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1457067 acccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacccattggttccctcctttgct 1456986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 226 - 307
Target Start/End: Original strand, 27445150 - 27445231
Alignment:
Q  226 acccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacccattggttccctcctttgct 307  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27445150 acccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacccattggttccctcctttgct 27445231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 226 - 307
Target Start/End: Original strand, 27449994 - 27450075
Alignment:
Q  226 acccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacccattggttccctcctttgct 307  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27449994 acccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacccattggttccctcctttgct 27450075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 1 - 168
Target Start/End: Complemental strand, 37556701 - 37556533
Alignment:
Q  1 tgttgacccagttcagccaatatggcctaatctggg--agagagcagctctccaatccaatatgagaaagtgttacaaaaggttgcaagaagctctagc- 97  Q
    ||||||||||||||||||||| ||||||||||||||  |||||||||||||||||||||||||| ||||||||||||||||||| |||| |  ||||||     
T  37556701 tgttgacccagttcagccaatgtggcctaatctgggggagagagcagctctccaatccaatatgtgaaagtgttacaaaaggttacaagta--tctagct 37556604  T
Q  98 tatcaagctttacacaag-acagaccctagattctaccctttggtgtttccccactctcacaagatgaaccc 168  Q
    |||||||||||||||| | ||| ||||||||  |||||||||||| ||| ||||||||||||  ||||||||    
T  37556603 tatcaagctttacacatgaacaaaccctaga-actaccctttggtattttcccactctcacactatgaaccc 37556533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 1 - 168
Target Start/End: Complemental strand, 37561523 - 37561355
Alignment:
Q  1 tgttgacccagttcagccaatatggcctaatctggg--agagagcagctctccaatccaatatgagaaagtgttacaaaaggttgcaagaagctctagc- 97  Q
    ||||||||||||||||||||| ||||||||||||||  |||||||||||||||||||||||||| ||||||||||||||||||| |||| |  ||||||     
T  37561523 tgttgacccagttcagccaatgtggcctaatctgggggagagagcagctctccaatccaatatgtgaaagtgttacaaaaggttacaagta--tctagct 37561426  T
Q  98 tatcaagctttacacaag-acagaccctagattctaccctttggtgtttccccactctcacaagatgaaccc 168  Q
    |||||||||||||||| | ||| ||||||||  |||||||||||| ||| ||||||||||||  ||||||||    
T  37561425 tatcaagctttacacatgaacaaaccctaga-actaccctttggtattttcccactctcacactatgaaccc 37561355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 1 - 189
Target Start/End: Original strand, 38192179 - 38192369
Alignment:
Q  1 tgttgacccagttcagccaatatggcctaatct--gggagagagcagctctccaatccaatatga-gaaagtgttacaaaaggttgcaagaagctctagc 97  Q
    |||||||||||||||||||||||||||||||||  |||||||||||||||||||||||| ||||| |||||||||||||| |||| ||||||    ||||    
T  38192179 tgttgacccagttcagccaatatggcctaatctgggggagagagcagctctccaatccactatgatgaaagtgttacaaagggttacaagaa-aaatagc 38192277  T
Q  98 tatcaagctttacacaag-acagaccctagattctaccctttggtgtttccccactctcacaagatgaaccctaaaagagaagtcactagagg 189  Q
    |  ||||| ||||||||| |||   ||||| |||||||| || |||||||||||||||||||| ||||||||||||||||||| ||| |||||    
T  38192278 ttgcaagc-ttacacaagaacaagtcctagtttctacccatttgtgtttccccactctcacaatatgaaccctaaaagagaagacacaagagg 38192369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 226 - 307
Target Start/End: Original strand, 43592459 - 43592540
Alignment:
Q  226 acccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacccattggttccctcctttgct 307  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43592459 acccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacccattggttccctcctttgct 43592540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 226 - 307
Target Start/End: Original strand, 43598904 - 43598985
Alignment:
Q  226 acccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacccattggttccctcctttgct 307  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43598904 acccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacccattggttccctcctttgct 43598985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 226 - 307
Target Start/End: Original strand, 43604396 - 43604477
Alignment:
Q  226 acccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacccattggttccctcctttgct 307  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43604396 acccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacccattggttccctcctttgct 43604477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 226 - 307
Target Start/End: Original strand, 43609888 - 43609969
Alignment:
Q  226 acccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacccattggttccctcctttgct 307  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43609888 acccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacccattggttccctcctttgct 43609969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 226 - 307
Target Start/End: Original strand, 15044865 - 15044947
Alignment:
Q  226 acccaaggtgattacaatgtttttcccaa-cccaagagacactctcaacaaagacactcaacccattggttccctcctttgct 307  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15044865 acccaaggtgattacaatgtttttcccaaacccaagagacactctcaacaaagacactcaacccattggttccctcctttgct 15044947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 31397072 - 31396953
Alignment:
Q  1 tgttgacccagttcagccaatatggcctaatctggg--agagagcagctctccaatccaatatgagaaagtgttacaaaag-gttgcaagaagctctagc 97  Q
    ||||||||||||||||||||| ||||||||||||||  |||||||||||||||||||||||||| ||| |||||||||||| ||| ||||||  ||||||    
T  31397072 tgttgacccagttcagccaatgtggcctaatctgggggagagagcagctctccaatccaatatgtgaatgtgttacaaaagagttacaagaa--tctagc 31396975  T
Q  98 -tatcaagctttacacaagaca 118  Q
     |||||||||||||||||||||    
T  31396974 ttatcaagctttacacaagaca 31396953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 31401929 - 31401810
Alignment:
Q  1 tgttgacccagttcagccaatatggcctaatctggg--agagagcagctctccaatccaatatgagaaagtgttacaaaag-gttgcaagaagctctagc 97  Q
    ||||||||||||||||||||| ||||||||| ||||  |||||||||||||||||||||||||| ||| |||||||||||| ||| ||||||  ||||||    
T  31401929 tgttgacccagttcagccaatgtggcctaatatgggggagagagcagctctccaatccaatatgtgaatgtgttacaaaagagttacaagaa--tctagc 31401832  T
Q  98 -tatcaagctttacacaagaca 118  Q
     |||||||||||||||||||||    
T  31401831 ttatcaagctttacacaagaca 31401810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 168
Target Start/End: Original strand, 2785381 - 2785550
Alignment:
Q  1 tgttgacccagttcagccaatatggcctaatctggg--agagagcagctctccaatccaatatgagaaagtgttacaaaag-gttgcaagaagctctagc 97  Q
    ||||||||||||||||||||| ||||||||||||||  |||||||||||||||||||||||||| ||| |||||||||||| ||| ||||||  ||||||    
T  2785381 tgttgacccagttcagccaatgtggcctaatctgggggagagagcagctctccaatccaatatgtgaatgtgttacaaaagagttacaagaa--tctagc 2785478  T
Q  98 -tatcaagctttacacaag-acagaccctagattctaccctttggtgtttccccactctcacaagatgaaccc 168  Q
     | ||||||||||| || | ||| ||||||||  |||||||||||| ||| ||||| ||||||  ||||||||    
T  2785479 ttttcaagctttactcatgaacaaaccctaga-cctaccctttggtattttcccaccctcacactatgaaccc 2785550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 168
Target Start/End: Original strand, 33791322 - 33791491
Alignment:
Q  1 tgttgacccagttcagccaatatggcctaatctgggaga--gagcagctctccaatccaatatgagaaagtgttacaaaag-gttgcaagaagctctagc 97  Q
    ||||||||||||||||||||| |||||||||||||| ||  ||||||||||||||||||||||| ||| |||||||||||| ||| ||||||  ||||||    
T  33791322 tgttgacccagttcagccaatgtggcctaatctgggggaaagagcagctctccaatccaatatgtgaatgtgttacaaaagagttacaagaa--tctagc 33791419  T
Q  98 -tatcaagctttacacaag-acagaccctagattctaccctttggtgtttccccactctcacaagatgaaccc 168  Q
     | |||||||||||||| | ||| ||||||||  |||||||||||| ||| ||||| ||||||  ||||||||    
T  33791420 ttttcaagctttacacatgaacaaaccctaga-cctaccctttggtattttcccaccctcacactatgaaccc 33791491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 288
Target Start/End: Original strand, 15464537 - 15464823
Alignment:
Q  1 tgttgacccagttcag-ccaatatggcctaatctggg--agagagcagctctccaatccaatatga-gaaagtgttacaaaaggttgcaagaagctctag 96  Q
    |||||||||||||| | ||||||||  ||||||||||  ||||||||||||||||||||| ||||| ||||||||||||||  ||| ||||||    |||    
T  15464537 tgttgacccagttcggtccaatatgatctaatctgggggagagagcagctctccaatccactatgatgaaagtgttacaaagagttacaagaa-aaatag 15464635  T
Q  97 ctatcaagctttacacaag-acagaccctagattctaccctttggtgtttccccactctcacaa-gatgaaccctaaaagagaagtcactagaggaagct 194  Q
    ||  ||||| ||||||||| |||   ||||  |||||||| || |||||| |||||||||||||  ||||||||||||||||||| ||| | ||||||||    
T  15464636 cttgcaagc-ttacacaagaacaagacctaatttctacccatttgtgttt-cccactctcacaataatgaaccctaaaagagaagacacaaaaggaagct 15464733  T
Q  195 ttaaatccttccaaccaatgaactcctcactacccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaaccc 288  Q
    ||  ||||||||||    |||| | |||||||||||||||| |||| |||  |||||||||||||||||  ||| | |||||||||||||||||    
T  15464734 tttgatccttccaa-tggtgaaat-ctcactacccaaggtgtttacgatg--tttcccaacccaagagatcctcactacaaagacactcaaccc 15464823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 113
Target Start/End: Original strand, 33768185 - 33768299
Alignment:
Q  1 tgttgacccagttcagccaatatggcctaatctgggag--agagcagctctccaatccaatatgagaaagtgttacaaaag-gttgcaagaagctctagc 97  Q
    ||||||||||||||||||||| |||||||||||||| |  |||||||||||||||||||||||| ||| |||||||||||| ||| ||||||  ||||||    
T  33768185 tgttgacccagttcagccaatgtggcctaatctgggggggagagcagctctccaatccaatatgtgaatgtgttacaaaagagttacaagaa--tctagc 33768282  T
Q  98 -tatcaagctttacaca 113  Q
     | ||||||||||||||    
T  33768283 ttttcaagctttacaca 33768299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 306
Target Start/End: Complemental strand, 36932442 - 36932138
Alignment:
Q  1 tgttgacccagttcag-ccaatatggcctaatctggg--agagagcagctctccaatccaatatga-gaaagtgttacaaaaggttgcaagaagctctag 96  Q
    |||||||||||||| | |||||||| |||||||||||  ||||||||||||||||||||| ||||| ||||||||||||||  ||| ||||||    |||    
T  36932442 tgttgacccagttcggtccaatatgacctaatctgggggagagagcagctctccaatccactatgatgaaagtgttacaaagagttacaagaa-aaatag 36932344  T
Q  97 ctatcaagctttacacaag-acagaccctagattctaccctttggtgtttccccactctcacaa-gatgaaccctaaaagagaagtcactagaggaagct 194  Q
    ||  |||| |||||| ||| |||   | ||  |||||||| || |||||| ||||||||| |||  ||||||||||||| ||||| ||| ||||||||||    
T  36932343 cttgcaag-tttacataagaacaagacttaatttctacccatttgtgttt-cccactctctcaataatgaaccctaaaacagaagacacaagaggaagct 36932246  T
Q  195 ttaaatccttccaaccaatgaactcctcactacccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacccattggt 294  Q
    ||  ||||||||||    |||| | |||||||||||||||| ||||||||  |||||||||||||||||   || | | |||||||||||||||    ||    
T  36932245 tttgatccttccaa-tggtgaaat-ctcactacccaaggtgtttacaatg--tttcccaacccaagagatcatcactataaagacactcaaccctaaagt 36932150  T
Q  295 tccctcctttgc 306  Q
    ||||||||||||    
T  36932149 tccctcctttgc 36932138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 9353424 - 9353344
Alignment:
Q  1 tgttgacccagttcag-ccaatatggcctaatctggg--agagagcagctctccaatccaatatga-gaaagtgttacaaa 77  Q
    |||||||||||||| | |||||||| |||||||||||  ||||||||||||||||||||| ||||| ||||||||||||||    
T  9353424 tgttgacccagttcggtccaatatgacctaatctgggggagagagcagctctccaatccactatgatgaaagtgttacaaa 9353344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 288
Target Start/End: Original strand, 14520235 - 14520519
Alignment:
Q  1 tgttgacccagttcag-ccaatatggcctaatct--gggagagagcagctctccaatccaatatga-gaaagtgttacaaaaggttgcaagaagctctag 96  Q
    |||||||||||||| | |||||||| ||||||||  ||| |||||||||||| ||||||| ||||| ||||||||||||||  ||| ||||||    |||    
T  14520235 tgttgacccagttcggtccaatatgacctaatctaggggggagagcagctcttcaatccactatgatgaaagtgttacaaagagttacaagaa--aatag 14520332  T
Q  97 ctatcaagctttacacaag-acagaccctagattctaccctttggtgtttccccactctcacaa-gatgaaccctaaaagagaagtcactagaggaagct 194  Q
    ||  ||||| ||||||||| |||   ||||  |||||||| || ||| || ||||||||| |||  ||||||||| ||||||||| ||| | ||||||||    
T  14520333 cttgcaagc-ttacacaagaacaagacctaatttctacccatttgtg-ttacccactctctcaattatgaaccct-aaagagaagacacaaaaggaagct 14520429  T
Q  195 ttaaatccttccaaccaatgaactcctcactacccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaaccc 288  Q
    ||  ||||||||||    |||| | ||||||| |||||||| ||||||||  |||||||||||||||||  ||| | |||||||||||||||||    
T  14520430 tttgatccttccaa-tggtgaaat-ctcactatccaaggtgtttacaatg--tttcccaacccaagagatcctcactacaaagacactcaaccc 14520519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 10281756 - 10281838
Alignment:
Q  1 tgttgacccagttcag-ccaatatggcctaatctggg--agagagcagctctccaatccaatatga-gaaagtgttacaaaag 79  Q
    |||||||||||||| | |||||||| ||| |||||||  ||||||||||||||||||||| ||||| ||||||||||||||||    
T  10281756 tgttgacccagttcggtccaatatgacctgatctgggggagagagcagctctccaatccactatgatgaaagtgttacaaaag 10281838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 220 - 305
Target Start/End: Complemental strand, 24553401 - 24553318
Alignment:
Q  220 ctcactacccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacccattggttccctcctttg 305  Q
    |||||||||||||||| |||||||||||  ||||||||||||||  ||| | ||||||||||||||||| |  ||| |||||||||    
T  24553401 ctcactacccaaggtgtttacaatgttt--cccaacccaagagaacctcactacaaagacactcaacccttaagttacctcctttg 24553318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 227 - 277
Target Start/End: Complemental strand, 28807479 - 28807429
Alignment:
Q  227 cccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaag 277  Q
    |||||||||||||||||||||||||||||| |||| ||||||||| |||||    
T  28807479 cccaaggtgattacaatgtttttcccaacctaagaaacactctcatcaaag 28807429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 221 - 287
Target Start/End: Complemental strand, 11181705 - 11181641
Alignment:
Q  221 tcactacccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacc 287  Q
    ||||||||||||||| |||||||||||  ||||||||||||||  ||| | ||||||||||||||||    
T  11181705 tcactacccaaggtgtttacaatgttt--cccaacccaagagaacctcactacaaagacactcaacc 11181641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 11917064 - 11916982
Alignment:
Q  1 tgttgacccagttcag-ccaatatggcctaatctggg--agagagcagctctccaatccaatatga-gaaagtgttacaaaag 79  Q
    |||||||||||||| | |||||||| |||||| ||||  ||||||||||||||||||||| ||| | ||||||||||||||||    
T  11917064 tgttgacccagttcggtccaatatgacctaatatgggggagagagcagctctccaatccactataatgaaagtgttacaaaag 11916982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 19588751 - 19588833
Alignment:
Q  1 tgttgacccagttcag-ccaatatggcctaatct--gggagagagcagctctccaatccaatatga-gaaagtgttacaaaag 79  Q
    |||||||||||||| | ||||||||  |||||||  ||||||||||||| |||||||||| ||||| ||||||||||||||||    
T  19588751 tgttgacccagttcggtccaatatgaactaatcttagggagagagcagccctccaatccactatgatgaaagtgttacaaaag 19588833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 220 - 286
Target Start/End: Original strand, 28832480 - 28832544
Alignment:
Q  220 ctcactacccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaac 286  Q
    |||||||||||||||| ||||||||  |||||||||||||||||  ||| | |||||||||||||||    
T  28832480 ctcactacccaaggtgtttacaatg--tttcccaacccaagagaacctcactacaaagacactcaac 28832544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 17 - 79
Target Start/End: Original strand, 3880321 - 3880386
Alignment:
Q  17 ccaatatggcctaatctggg--agagagcagctctccaatccaatatga-gaaagtgttacaaaag 79  Q
    |||||||| ||||||||| |  ||||||||||||||||||||| ||||| ||||||||||||||||    
T  3880321 ccaatatgacctaatctgaggcagagagcagctctccaatccactatgatgaaagtgttacaaaag 3880386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 220 - 288
Target Start/End: Complemental strand, 9353206 - 9353140
Alignment:
Q  220 ctcactacccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaaccc 288  Q
    |||||||||||||||| ||||||||  |||||||||||||||||  ||| | ||||||||||| |||||    
T  9353206 ctcactacccaaggtgtttacaatg--tttcccaacccaagagatcctcactacaaagacacttaaccc 9353140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 220 - 288
Target Start/End: Complemental strand, 11916846 - 11916780
Alignment:
Q  220 ctcactacccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaaccc 288  Q
    |||||||||||||||| ||||||||  |||||||||||||||||  ||| | ||||||| |||||||||    
T  11916846 ctcactacccaaggtgtttacaatg--tttcccaacccaagagatcctcactacaaagaaactcaaccc 11916780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 12084267 - 12084187
Alignment:
Q  1 tgttgacccagttcag-ccaatatggcctaatctggg--agagagcagctctccaatccaatatga-gaaagtgttacaaa 77  Q
    |||||||||||||| | ||| |||| |||||| ||||  ||||||||||||||||||||| ||||| ||||||||||||||    
T  12084267 tgttgacccagttcggtccactatgacctaatatggggcagagagcagctctccaatccactatgatgaaagtgttacaaa 12084187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 220 - 287
Target Start/End: Complemental strand, 31300469 - 31300404
Alignment:
Q  220 ctcactacccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacc 287  Q
    |||||||||||||||| ||||||||  |||| ||||||||||||  ||| | ||||||||||||||||    
T  31300469 ctcactacccaaggtgtttacaatg--tttctcaacccaagagaacctcactacaaagacactcaacc 31300404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 17004052 - 17003970
Alignment:
Q  1 tgttgacccagttcag-ccaatatggcctaatctggg--agagagcagctctccaatccaatatga-gaaagtgttacaaaag 79  Q
    |||||||||||||| | |||||||| |||||||||||  ||||||||||||| ||||||| ||||| |||||| || ||||||    
T  17004052 tgttgacccagttcggtccaatatgacctaatctgggggagagagcagctcttcaatccactatgatgaaagtatttcaaaag 17003970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 227 - 277
Target Start/End: Original strand, 2785556 - 2785608
Alignment:
Q  227 cccaaggtgattacaatgt--ttttcccaacccaagagacactctcaacaaag 277  Q
    |||||||||||||||||||  ||||||||||| |||| ||||||||| |||||    
T  2785556 cccaaggtgattacaatgttgttttcccaacctaagaaacactctcatcaaag 2785608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 228 - 288
Target Start/End: Complemental strand, 7160770 - 7160712
Alignment:
Q  228 ccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaaccc 288  Q
    ||||||||||||||||||||  ||||| ||||||||  ||| | |||||||||||||||||    
T  7160770 ccaaggtgattacaatgttt--cccaatccaagagaacctcactacaaagacactcaaccc 7160712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 220 - 288
Target Start/End: Complemental strand, 17003833 - 17003767
Alignment:
Q  220 ctcactacccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaaccc 288  Q
    |||||||||||||||| ||||||||  ||||| |||||||||||  ||| | ||||||||| |||||||    
T  17003833 ctcactacccaaggtgtttacaatg--tttccaaacccaagagaacctcactacaaagacattcaaccc 17003767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 220 - 288
Target Start/End: Original strand, 19588968 - 19589034
Alignment:
Q  220 ctcactacccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaaccc 288  Q
    |||||| |||||| || |||||||||||  ||||||||||||||  ||| | |||||||||||||||||    
T  19588968 ctcactgcccaagatgtttacaatgttt--cccaacccaagagatcctcactacaaagacactcaaccc 19589034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 227 - 277
Target Start/End: Complemental strand, 31396895 - 31396843
Alignment:
Q  227 cccaaggtgattacaatgtt--tttcccaacccaagagacactctcaacaaag 277  Q
    ||||||||||||||||||||  |||||||||| |||| ||||||||| |||||    
T  31396895 cccaaggtgattacaatgttgttttcccaacctaagatacactctcatcaaag 31396843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 227 - 277
Target Start/End: Complemental strand, 31401752 - 31401700
Alignment:
Q  227 cccaaggtgattacaatgtt--tttcccaacccaagagacactctcaacaaag 277  Q
    ||||||||||||||||||||  |||||||||| |||| ||||||||| |||||    
T  31401752 cccaaggtgattacaatgttgttttcccaacctaagatacactctcatcaaag 31401700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 227 - 277
Target Start/End: Original strand, 33768365 - 33768417
Alignment:
Q  227 cccaaggtgattacaatgt--ttttcccaacccaagagacactctcaacaaag 277  Q
    |||||||||||||||||||  ||||||||||| |||| ||||||||| |||||    
T  33768365 cccaaggtgattacaatgttgttttcccaacctaagaaacactctcatcaaag 33768417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 227 - 277
Target Start/End: Original strand, 33791497 - 33791549
Alignment:
Q  227 cccaaggtgattacaatgt--ttttcccaacccaagagacactctcaacaaag 277  Q
    |||||||||||||||||||  ||||||||||| |||| ||||||||| |||||    
T  33791497 cccaaggtgattacaatgttgttttcccaacctaagaaacactctcatcaaag 33791549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 28832264 - 28832343
Alignment:
Q  1 tgttgacccagttcag-ccaatatggcctaatctggg--agagagcagctctccaatccaatatga-gaaagtgttacaa 76  Q
    ||||||||| |||| | |||||||| |||||||||||  |||||||||| |||||||||| || || |||||||||||||    
T  28832264 tgttgacccggttcggtccaatatgacctaatctgggggagagagcagccctccaatccactaagatgaaagtgttacaa 28832343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 238; Significance: 1e-132; HSPs: 65)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 238; E-Value: 1e-132
Query Start/End: Original strand, 1 - 305
Target Start/End: Complemental strand, 28503955 - 28503647
Alignment:
Q  1 tgttgacccagttcagccaatatggcctaatctggg--agagagcagctctccaatccaatatgagaaagtgttacaaaaggttgcaagaagctctagct 98  Q
    ||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||     
T  28503955 tgttgacccagttcagccaatatggcctaatctggggaagagagcagctctccaatccaatatgagaaagtgttacaaaaggttacaagaaactctagcc 28503856  T
Q  99 atcaagctttacacaagac-agaccctagattctaccctttggtgtttccccactctcacaagatgaaccctaaaagagaagtcactagaggaagcttta 197  Q
     |||||||||||||||||  | |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  28503855 ttcaagctttacacaagaataaaccctagattctaccctttggtgtttccccactctcacaatatgaaccctaaaagagaagtcactagaggaagcttta 28503756  T
Q  198 aatccttccaaccaatgaactcctcactacccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaaccc-attggttc 296  Q
     ||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||  |||||||    
T  28503755 gatccttccaactaatgaactcctcactacccaaggtgattacaatatttttcccaacccaagagacactctcaacaaagacactcaacccttttggttc 28503656  T
Q  297 cctcctttg 305  Q
    |||||||||    
T  28503655 cctcctttg 28503647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 211; E-Value: 1e-115
Query Start/End: Original strand, 1 - 305
Target Start/End: Original strand, 7167250 - 7167558
Alignment:
Q  1 tgttgacccagttcagccaatatggcctaatctggg--agagagcagctctccaatccaatatga-gaaagtgttacaaaaggttgcaagaagctctagc 97  Q
    ||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||| |||||||||||||| |||| |||||| |  ||||    
T  7167250 tgttgacccagttcagccaatatggcctaatctgggggagagagcagctctccaatccaatatgatgaaagtgttacaaagggttacaagaaacaatagc 7167349  T
Q  98 tatcaagctttacacaaga-cagaccctagattctaccctttggtgtttccccactctcacaagatgaaccctaaaagagaagtcactagaggaagcttt 196  Q
      |||||||| |||||||| || |||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||| ||||||||||||||||    
T  7167350 cttcaagctt-acacaagaacaaaccctagattctaccctttggtatttccccactctcacaatatgaaccctaaaagagaagacactagaggaagcttt 7167448  T
Q  197 aaatccttccaaccaatgaactcctcactacccaaggtgattacaatg-tttttcccaacccaagagacactctcaacaaagacactcaacccattggtt 295  Q
    | ||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  7167449 agatccttccaactaatgaactcctcactacccaaggtgattacaatgttttttcccaacccaagagacactctcaacaaagacactcaaccctttggtt 7167548  T
Q  296 ccctcctttg 305  Q
    ||||||||||    
T  7167549 ccctcctttg 7167558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 211; E-Value: 1e-115
Query Start/End: Original strand, 37 - 305
Target Start/End: Complemental strand, 28501750 - 28501480
Alignment:
Q  37 agagagcagctctccaatccaatatgagaaagtgttacaaaaggttgcaagaagctctagctatcaagctttacacaagac-agaccctagattctaccc 135  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||  |||||||||||||||||  | ||||||||||||||||    
T  28501750 agagagcagctctccaatccaatatgagaaagtgttacaaaaggttacaagaaactctagccttcaagctttacacaagaataaaccctagattctaccc 28501651  T
Q  136 tttggtgtttccccactctcacaagatgaaccctaaaagagaagtcactagaggaagctttaaatccttccaaccaatgaactcctcactacccaaggtg 235  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||    
T  28501650 tttggtgtttccccactctcacaatatgaaccctaaaagagaagtcactagaggaagctttagatccttccaactaatgaactcctcactacccaaggtg 28501551  T
Q  236 attacaatgtttttcccaacccaagagacactctcaacaaagacactcaaccc-attggttccctcctttg 305  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||  ||||||||||||||||    
T  28501550 attacaatgtttttcccaacccaagagacactctcaacaaagacactcatcccttttggttccctcctttg 28501480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 198; E-Value: 1e-108
Query Start/End: Original strand, 1 - 305
Target Start/End: Complemental strand, 2671677 - 2671370
Alignment:
Q  1 tgttgacccagttcagccaatatggcctaatctggg--agagagcagctctccaatccaatatga-gaaagtgttacaaaaggttgcaagaagctctagc 97  Q
    ||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||| |||||||||||||| |||| |||||| |  |||     
T  2671677 tgttgacccagttcagccaatatggcctaatctgggggagagagcagctctccaatccaatatgatgaaagtgttacaaagggttacaagaaacaataga 2671578  T
Q  98 tatcaagctttacacaagacaga-ccctagattctaccctttggtgtttccccactctcacaagatgaaccctaaaagagaagtcactagaggaagcttt 196  Q
    |  ||||||| |||||||||  | ||||||||||||||| |  |||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||    
T  2671577 ttgcaagctt-acacaagaccaagccctagattctacccatatgtgtttccccactctcacaatatgaaccctaaaagagaagacactagaggaagcttt 2671479  T
Q  197 aaatccttccaaccaatgaactcctcactacccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacccattggttc 296  Q
    | ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||    
T  2671478 agatccttccaactaatgaactcctcactacccaaggtgattacaatgtttttcccaacccaagagacactctctacaaagacactcaaccctttggttc 2671379  T
Q  297 cctcctttg 305  Q
    |||||||||    
T  2671378 cctcctttg 2671370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 1 - 302
Target Start/End: Original strand, 8477368 - 8477674
Alignment:
Q  1 tgttgacccagttcagccaatatggcctaatctggg--agagagcagctctccaatccaatatga-gaaagtgttacaaaaggttgcaagaagctctagc 97  Q
    ||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||| |||||||||||||| |||| |||||| |  ||||    
T  8477368 tgttgacccagttcagccaatatggcctaatctgggggagagagcagctctccaatccaatatgatgaaagtgttacaaagggttacaagaaacaatagc 8477467  T
Q  98 tatcaagctttacacaagacagac--cctagattctaccctttggtgtttcccc-actctcacaagatgaaccctaaaagagaagtcactagaggaagct 194  Q
    |  ||||||| |||||| | | |   |||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||| ||||||||||||||    
T  8477468 ttgcaagctt-acacaataaacaagacctagattctaccctttggtgtttcccccactctcacaatatgaaccctaaaagagaagacactagaggaagct 8477566  T
Q  195 ttaaatccttccaaccaatgaactcctcactacccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacccattggt 294  Q
    ||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||    
T  8477567 ttagatccttccaactaatgaactcctcactacccaaggtgattacaatgtttttcccaacccaagagacactctctacaaagacactcaaccctttggt 8477666  T
Q  295 tccctcct 302  Q
    ||||||||    
T  8477667 tccctcct 8477674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 191; E-Value: 1e-104
Query Start/End: Original strand, 1 - 306
Target Start/End: Complemental strand, 8739154 - 8738846
Alignment:
Q  1 tgttgacccagttcagccaatatggcctaatctggg--agagagcagctctccaatccaatatga-gaaagtgttacaaaaggttgcaagaagctctagc 97  Q
    ||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||| |||||||||||||| |||| |||||| |  ||||    
T  8739154 tgttgacccagttcagccaatatggcctaatctgggggagagagcagctctccaatccaatatgatgaaagtgttacaaagggttacaagaaacaatagc 8739055  T
Q  98 tatcaagctttacacaaga-cagaccctagattctaccctttggtgtttccccactctcacaagatgaaccctaaaagagaagtcactagaggaagcttt 196  Q
      |||||||| |||||||| ||  ||||||||||||||| |  || ||||||||||||||||| |||||||||| |||||||| ||||||||||||||||    
T  8739054 cttcaagctt-acacaagaacaatccctagattctacccatatgtatttccccactctcacaatatgaaccctagaagagaagacactagaggaagcttt 8738956  T
Q  197 aaatccttccaaccaatgaactcctcactacccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacccattggttc 296  Q
    | |||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||    
T  8738955 agatcctttcaactaatgaactcctcactacccaaggtgattacaatgtttttcccaacccaagagatactctctacaaagacactcaacccattggttc 8738856  T
Q  297 cctcctttgc 306  Q
    ||||||||||    
T  8738855 cctcctttgc 8738846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 1 - 305
Target Start/End: Complemental strand, 40372886 - 40372580
Alignment:
Q  1 tgttgacccagttcagccaatatggcctaatctggg--agagagcagctctccaatccaatatga-gaaagtgttacaaaaggttgcaagaagctctagc 97  Q
    ||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||| |||||||||||||| |||| ||||||    ||||    
T  40372886 tgttgacccagttcagccaatatggcctaatctgggggagagagcagctctccaatccaatatgatgaaagtgttacaaagggttacaagaaaaa-tagc 40372788  T
Q  98 tatcaagctttacacaaga-cagaccctagattctaccctttggtgtttccccactctcacaagatgaaccctaaaagagaagtcactagaggaagcttt 196  Q
    |  ||||||| |||||||| ||  ||||||||||||||| |  ||||||||||||||||| || ||||||||||||||||||| ||||||||||||||||    
T  40372787 ttgcaagctt-acacaagaacaagccctagattctacccatatgtgtttccccactctcataatatgaaccctaaaagagaagacactagaggaagcttt 40372689  T
Q  197 aaatccttccaaccaatgaactcctcactacccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacccattggttc 296  Q
    | ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||    
T  40372688 agatccttccaactaatgaactcctcactacccaaggtgattacaatgtttttcccaacccaagagacactctctacaaagacactcaaccctttggttc 40372589  T
Q  297 cctcctttg 305  Q
    |||||||||    
T  40372588 cctcctttg 40372580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 186; E-Value: 1e-101
Query Start/End: Original strand, 1 - 305
Target Start/End: Complemental strand, 9091392 - 9091085
Alignment:
Q  1 tgttgacccagttcagccaatatggcctaatctggg--agagagcagctctccaatccaatatga-gaaagtgttacaaaaggttgcaagaagctctagc 97  Q
    ||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||| |||||||||||||| |||| |||||| |  ||||    
T  9091392 tgttgacccagttcagccaatatggcctaatctgggggagagagcagctctccaatccaatatgatgaaagtgttacaaagggttacaagaaacaatagc 9091293  T
Q  98 tatcaagctttacacaaga-cagaccctagattctaccctttggtgtttccccactctcacaagatgaaccctaaaagagaagtcactagaggaagcttt 196  Q
      |||||||| |||||||| ||  ||||||||||||||| |  || ||||||||||||||||| |||||||||| |||||||| ||||||||||||||||    
T  9091292 cttcaagctt-acacaagaacaatccctagattctacccatatgtatttccccactctcacaatatgaaccctagaagagaagacactagaggaagcttt 9091194  T
Q  197 aaatccttccaaccaatgaactcctcactacccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacccattggttc 296  Q
    | |||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||| |||||||    
T  9091193 agatcctttcaactaatgaactcctcactacccaaggtgattacaatgtttttcccaacccaagagatactctctacaaagacactcaaccctttggttc 9091094  T
Q  297 cctcctttg 305  Q
    |||||||||    
T  9091093 cctcctttg 9091085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 1 - 173
Target Start/End: Complemental strand, 22173274 - 22173100
Alignment:
Q  1 tgttgacccagttcagccaatatggcctaatctggg--agagagcagctctccaatccaatatgagaaagtgttacaaaaggttgcaagaagctctagct 98  Q
    ||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||     
T  22173274 tgttgacccagttcagccaatatggcctaatctgggggagagagcagctctccaatccaatatgagaaagtgttacaaaaggttacaagaa-ctctagcc 22173176  T
Q  99 atcaagctttacacaag-acagaccctagattctaccctttggtgtttccccactctcacaagatgaaccctaaaa 173  Q
     |||||||||||||| | ||| ||||||||||||||||||||||||||||||||||||  || |||||||||||||    
T  22173175 ttcaagctttacacatgaacaaaccctagattctaccctttggtgtttccccactctcctaatatgaaccctaaaa 22173100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 1 - 288
Target Start/End: Complemental strand, 26928682 - 26928396
Alignment:
Q  1 tgttgacccagttcagccaatatggcctaatctggg--agagagcagctctccaatccaatatga-gaaagtgttacaaaaggttgcaagaagctctagc 97  Q
    |||||||||||||||||||||||| |||||||||||  |||||||| |||||||||||| ||||| |||||||||||||| |||| ||||||    ||||    
T  26928682 tgttgacccagttcagccaatatgacctaatctgggggagagagcaactctccaatccactatgatgaaagtgttacaaagggttacaagaaaaaatagc 26928583  T
Q  98 tatcaagctttacacaaga-cagaccctagattctaccctttggtgtttccccactctcacaagatgaaccctaaaagagaagtcactagaggaagcttt 196  Q
    |  ||||||| |||||||| ||   |||||||||||||| || |||||||||||||||||||| ||||||||||||||||||| ||| ||||||||||||    
T  26928582 ttgcaagctt-acacaagaacaagacctagattctacccatttgtgtttccccactctcacaatatgaaccctaaaagagaagacacaagaggaagcttt 26928484  T
Q  197 aaatccttccaaccaatgaactcctcactacccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaaccc 288  Q
      ||||||||||    |||| | |||| ||||||||||| ||||||||  |||||||||||||||||  ||| | |||||||||||||||||    
T  26928483 tgatccttccaa-tggtgaaat-ctcattacccaaggtgtttacaatg--tttcccaacccaagagatcctcactacaaagacactcaaccc 26928396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 1 - 286
Target Start/End: Original strand, 1305954 - 1306239
Alignment:
Q  1 tgttgacccagttcagccaatatggcctaatct--gggagagagcagctctccaatccaatatga-gaaagtgttacaaaaggttgcaagaagctctagc 97  Q
    |||||||||||||||||||||||||||||||||  |||||| ||||||||||||||||| || || |||||||||||||| |||| ||||||    |||     
T  1305954 tgttgacccagttcagccaatatggcctaatctaggggagatagcagctctccaatccactacgatgaaagtgttacaaagggttacaagaa-aaatagt 1306052  T
Q  98 tatcaagctttacacaag-acagaccctagattctaccctttggtgtttccccactctcacaagatgaaccctaaaagagaagtcactagaggaagcttt 196  Q
    |  ||||| ||||||||| |||   | ||| |||||||| || |||||||||||||||| ||| ||||||||||||||||||| ||| |||||||||||     
T  1306053 ttgcaagc-ttacacaagaacaagtcatagtttctacccatttgtgtttccccactctctcaatatgaaccctaaaagagaagacacaagaggaagctta 1306151  T
Q  197 aaatccttccaaccaatgaactcctcactacccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaac 286  Q
    | ||||||||||    |||| | |||||||||||||||| |||||||||||||||||||||||||||  ||| | |||||||||||||||    
T  1306152 agatccttccaa-tggtgaaat-ctcactacccaaggtgtttacaatgtttttcccaacccaagagatcctcactacaaagacactcaac 1306239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 1 - 158
Target Start/End: Original strand, 18656441 - 18656598
Alignment:
Q  1 tgttgacccagttcagccaatatggcctaatctggg--agagagcagctctccaatccaatatgagaaagtgttacaaaaggttgcaagaagctctagct 98  Q
    ||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||| |||||  |||||||     
T  18656441 tgttgacccagttcagccaatatggcctaatctgggggagagagcagctctccaatccaatatgagaaagtgttacaaaaggttacaaga--ctctagca 18656538  T
Q  99 atcaagctttacacaag-acagaccctagattctaccctttggtgtttccccactctcaca 158  Q
     |||||||||||||| | ||| |||||||| ||||||||||||| ||| ||||||||||||    
T  18656539 ttcaagctttacacatgaacaaaccctaga-tctaccctttggtattttcccactctcaca 18656598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 1 - 305
Target Start/End: Original strand, 32143326 - 32143629
Alignment:
Q  1 tgttgacccagttcag-ccaatatggcctaatctggg--agagagcagctctccaatccaatatga-gaaagtgttacaaaaggttgcaagaagctctag 96  Q
    |||||||| ||||| | |||||||| |||||||||||  ||||||||||||||||||||| ||||| |||||||||||||| |||| ||||||    |||    
T  32143326 tgttgacctagttcggtccaatatgacctaatctgggggagagagcagctctccaatccactatgatgaaagtgttacaaagggttacaagaaaaa-tag 32143424  T
Q  97 ctatcaagctttacacaaga-cagaccctagattctaccctttggtgtttccccactctcacaagatgaaccctaaaagagaagtcactagaggaagctt 195  Q
    ||  ||||||| |||||||| ||   |||||||||||||| || |||||||||||||||| ||| ||||||||||||||||||| ||| |||||||||||    
T  32143425 cttgcaagctt-acacaagaacaagacctagattctacccatttgtgtttccccactctctcaatatgaaccctaaaagagaagacacaagaggaagctt 32143523  T
Q  196 taaatccttccaaccaatgaactcctcactacccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacccattggtt 295  Q
    |  ||||||||||    |||| | |||||||||||||||| ||||||||||||  |||||||||||||   || | |||||||||||||||||    |||    
T  32143524 ttgatccttccaa-tggtgaaat-ctcactacccaaggtgtttacaatgtttt--ccaacccaagagatcatcactacaaagacactcaaccctagagtt 32143619  T
Q  296 ccctcctttg 305  Q
    ||||||||||    
T  32143620 ccctcctttg 32143629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 226 - 307
Target Start/End: Complemental strand, 22173100 - 22173019
Alignment:
Q  226 acccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacccattggttccctcctttgct 307  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  22173100 acccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacccattggttccctactttgct 22173019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 1 - 172
Target Start/End: Complemental strand, 2677166 - 2676993
Alignment:
Q  1 tgttgacccagttcagccaatatggcctaatctggg--agagagcagctctccaatccaatatgagaaagtgttacaaaag-gttgcaagaagctctagc 97  Q
    ||||||||||||||||||||| ||||||||||||||  |||||||||||||||||||||||||| ||| |||||||||||| ||| ||||||  ||||||    
T  2677166 tgttgacccagttcagccaatgtggcctaatctgggggagagagcagctctccaatccaatatgtgaatgtgttacaaaagagttacaagaa--tctagc 2677069  T
Q  98 -tatcaagctttacacaagac-agaccctagattctaccctttggtgtttccccactctcacaagatgaaccctaaa 172  Q
     |||||||||||||||| ||| | |||||||| ||||||||||||| ||| ||||  ||||||  ||||||||||||    
T  2677068 ttatcaagctttacacatgacaaaaccctaga-tctaccctttggtattttcccatcctcacactatgaaccctaaa 2676993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 1 - 172
Target Start/End: Complemental strand, 2673010 - 2672837
Alignment:
Q  1 tgttgacccagttcagccaatatggcctaatctggg--agagagcagctctccaatccaatatgagaaagtgttacaaaag-gttgcaagaagctctagc 97  Q
    ||||||||||||||||||||| ||||||||||||||  |||||||||||||||||||||||||| ||| |||||||||||| ||| ||||||  ||||||    
T  2673010 tgttgacccagttcagccaatgtggcctaatctgggggagagagcagctctccaatccaatatgtgaatgtgttacaaaagagttacaagaa--tctagc 2672913  T
Q  98 -tatcaagctttacacaagac-agaccctagattctaccctttggtgtttccccactctcacaagatgaaccctaaa 172  Q
     |||||||||||||||| ||| | |||||||| ||||||||||||| ||| ||||  ||||||  ||||||| ||||    
T  2672912 ttatcaagctttacacatgacaaaaccctaga-tctaccctttggtattttcccatcctcacactatgaaccttaaa 2672837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 8512223 - 8512342
Alignment:
Q  1 tgttgacccagttcagccaatatggcctaatctggg--agagagcagctctccaatccaatatgagaaagtgttacaaaag-gttgcaagaagctctagc 97  Q
    ||||||||||||||||||||| ||||||||||||||  |||||||||||||||||||||||||| ||| |||||||||||| ||| ||||||  ||||||    
T  8512223 tgttgacccagttcagccaatgtggcctaatctgggggagagagcagctctccaatccaatatgtgaatgtgttacaaaagagttacaagaa--tctagc 8512320  T
Q  98 -tatcaagctttacacaagaca 118  Q
     |||||||||||||||||||||    
T  8512321 ttatcaagctttacacaagaca 8512342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 8517103 - 8517222
Alignment:
Q  1 tgttgacccagttcagccaatatggcctaatctggg--agagagcagctctccaatccaatatgagaaagtgttacaaaag-gttgcaagaagctctagc 97  Q
    ||||||||||||||||||||| ||||||||||||||  |||||||||||||||||||||||||| ||| |||||||||||| ||| ||||||  ||||||    
T  8517103 tgttgacccagttcagccaatgtggcctaatctgggggagagagcagctctccaatccaatatgtgaatgtgttacaaaagagttacaagaa--tctagc 8517200  T
Q  98 -tatcaagctttacacaagaca 118  Q
     |||||||||||||||||||||    
T  8517201 ttatcaagctttacacaagaca 8517222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 1 - 263
Target Start/End: Original strand, 27452963 - 27453224
Alignment:
Q  1 tgttgacccagttcag-ccaatatggcctaatctggg--agagagcagctctccaatccaatatga-gaaagtgttacaaaaggttgcaagaagctctag 96  Q
    |||||| ||||||| | |||||||| ||||||| |||  ||||||||||||||||||||| ||||| |||||||||||||| |||| ||||||    |||    
T  27452963 tgttgatccagttcggtccaatatgacctaatccgggggagagagcagctctccaatccactatgatgaaagtgttacaaagggttacaagaaaaa-tag 27453061  T
Q  97 ctatcaagctttacacaaga-cagaccctagattctaccctttggtgtttccccactctcacaagatgaaccctaaaagagaagtcactagaggaagctt 195  Q
    ||  ||||||| |||||||| ||   ||||  |||||||| || |||||||||||||||| ||| ||||||||||||||||||| ||| | |||||||||    
T  27453062 cttgcaagctt-acacaagaacaattcctattttctacccatttgtgtttccccactctctcaatatgaaccctaaaagagaagacacaaaaggaagctt 27453160  T
Q  196 taaatccttccaaccaatgaactcctcactacccaaggtgattacaatgtttttcccaacccaagaga 263  Q
    |  ||||||||||    |||| | |||||||||||||||| ||||||||  ||| |||||||||||||    
T  27453161 ttgatccttccaa-tggtgaaat-ctcactacccaaggtgtttacaatg--tttgccaacccaagaga 27453224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 32475491 - 32475608
Alignment:
Q  1 tgttgacccagttcagccaatatggcctaatct--gggagagagcagctctccaatccaatatgagaaagtgttacaaaaggttgcaagaagctctagc- 97  Q
    ||||||||||||||||||||| |||||||||||  ||||||||||||||||||||||||||||| ||| || |||||||  ||| ||||||  ||||||     
T  32475491 tgttgacccagttcagccaatgtggcctaatctgggggagagagcagctctccaatccaatatgtgaatgt-ttacaaagagttacaagaa--tctagct 32475587  T
Q  98 tatcaagctttacacaagaca 118  Q
    |||||||||||||||||||||    
T  32475588 tatcaagctttacacaagaca 32475608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 32480349 - 32480466
Alignment:
Q  1 tgttgacccagttcagccaatatggcctaatct--gggagagagcagctctccaatccaatatgagaaagtgttacaaaaggttgcaagaagctctagc- 97  Q
    ||||||||||||||||||||| |||||||||||  ||||||||||||||||||||||||||||| ||| || |||||||  ||| ||||||  ||||||     
T  32480349 tgttgacccagttcagccaatgtggcctaatctgggggagagagcagctctccaatccaatatgtgaatgt-ttacaaagagttacaagaa--tctagct 32480445  T
Q  98 tatcaagctttacacaagaca 118  Q
    |||||||||||||||||||||    
T  32480446 tatcaagctttacacaagaca 32480466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 172
Target Start/End: Original strand, 24968113 - 24968286
Alignment:
Q  1 tgttgacccagttcagccaatatggcctaatct--gggagagagcagctctccaatccaatatgagaaagtgttacaaaag-gttgcaagaagctctagc 97  Q
    ||||||||||||||||||||| |||| |||| |  ||||||||| ||||||||||||||||||| ||| |||||||||||| ||| ||||||  ||||||    
T  24968113 tgttgacccagttcagccaatgtggcttaattttggggagagagtagctctccaatccaatatgtgaatgtgttacaaaagagttacaagaa--tctagc 24968210  T
Q  98 ta-tcaagctttacacaag-acagaccctagattctaccctttggtgtttccccactctcacaagatgaaccctaaa 172  Q
    || |||||||||||||| | ||| |||| ||| |||||||||||||  || ||||  ||||||  ||||||||||||    
T  24968211 tattcaagctttacacatgaacaaacccgaga-tctaccctttggtactttcccatcctcacactatgaaccctaaa 24968286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 305
Target Start/End: Complemental strand, 27986528 - 27986236
Alignment:
Q  1 tgttgacccagttcag-ccaatatggcctaatctggg--agagagcagctctccaatccaatatga-gaaagtgttacaaaaggttgcaagaagctctag 96  Q
    |||||||||||||| | |||||||| |||||||||||  ||||||||||||||||||||| ||||| |||||||||||||      | || ||     ||    
T  27986528 tgttgacccagttcggtccaatatgacctaatctgggggagagagcagctctccaatccactatgatgaaagtgttacaa------gaaaaaa-----ag 27986440  T
Q  97 ctatcaagctttacacaag-acagaccctagattctaccctttggtgtttccccactctcacaagatgaaccctaaaagagaagtcactagaggaagctt 195  Q
    ||  ||||| ||||||||| |||   ||||  |||||||| || |||||| ||||||||| ||| || |||||||||||||||| ||| | |||||||||    
T  27986439 cttgcaagc-ttacacaagaacaagacctaatttctacccatttgtgttt-cccactctctcaatatcaaccctaaaagagaagacacaaaaggaagctt 27986342  T
Q  196 taaatccttccaaccaatgaactcctcactacccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacccattggtt 295  Q
    |  ||||||||||    |||| | |||||||||||||||| ||||||||  |||||||||||||||||  ||| | |||||||||||||||||    |||    
T  27986341 ttgatccttccaa-tggtgaaat-ctcactacccaaggtgtttacaatg--tttcccaacccaagagatcctcactacaaagacactcaaccctaaagtt 27986246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 288
Target Start/End: Complemental strand, 27975034 - 27974749
Alignment:
Q  1 tgttgacccagttcag-ccaatatggcctaatctggg--agagagcagctctccaatccaatatga-gaaagtgttacaaaaggttgcaagaagctctag 96  Q
    |||||||||||||| | |||||||| |||||||||||  ||||||||||||||||||||| ||||| ||||||||||||||  ||| ||||||    |||    
T  27975034 tgttgacccagttcggtccaatatgacctaatctgggggagagagcagctctccaatccactatgatgaaagtgttacaaagagttacaagaa-aaatag 27974936  T
Q  97 ctatcaagctttacacaag-acagaccctagattctaccctttggtgtttccccactctcacaa-gatgaaccctaaaagagaagtcactagaggaagct 194  Q
    ||  ||||| ||||||||| |||   ||||  |||||||| || |||||| |||| |||| |||  ||||||||| ||||||||| ||| | ||||||||    
T  27974935 cttgcaagc-ttacacaagaacaagacctaatttctacccatttgtgttt-cccattctctcaataatgaaccct-aaagagaagacacaaaaggaagct 27974839  T
Q  195 ttaaatccttccaaccaatgaactcctcactacccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaaccc 288  Q
    ||  ||||||||||    |||| | |||||||||||||||| ||||||||  |||||| ||||||||||  ||| | |||||||||||||||||    
T  27974838 tttgatccttccaa-tggtgaaat-ctcactacccaaggtgtttacaatg--tttcccgacccaagagatcctcactacaaagacactcaaccc 27974749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 128 - 288
Target Start/End: Complemental strand, 33386628 - 33386472
Alignment:
Q  128 ttctaccctttggtgtttccccactctcacaaga-tgaaccctaaaagagaagtcactagaggaagctttaaatccttccaaccaatgaactcctcacta 226  Q
    |||||||| || ||||||||| |||||| ||| | |||||||||||||||||| ||| | ||||||||||  ||||||||||    |||| || ||||||    
T  33386628 ttctacccatttgtgtttccc-actctctcaataatgaaccctaaaagagaagacacaaaaggaagcttttgatccttccaatgg-tgaaatc-tcacta 33386532  T
Q  227 cccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaaccc 288  Q
    ||||||||| ||||||||  |||| ||||||||||||  ||| | |||||||||||||||||    
T  33386531 cccaaggtgtttacaatg--tttctcaacccaagagatcctcactacaaagacactcaaccc 33386472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 8370568 - 8370488
Alignment:
Q  1 tgttgacccagttcag-ccaatatggcctaatctggg--agagagcagctctccaatccaatatga-gaaagtgttacaaa 77  Q
    |||||||||||||| | |||||||| |||||||||||  ||||||||||||||||||||| ||||| ||||||||||||||    
T  8370568 tgttgacccagttcggtccaatatgacctaatctgggggagagagcagctctccaatccactatgatgaaagtgttacaaa 8370488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 1736387 - 1736305
Alignment:
Q  1 tgttgacccagttcag-ccaatatggcctaatctggg--agagagcagctctccaatccaatatga-gaaagtgttacaaaag 79  Q
    |||||||||||||| | |||||||| |||||||||||  |||||||||| |||||||||| ||||| ||||||||||||||||    
T  1736387 tgttgacccagttcggtccaatatgacctaatctgggggagagagcagccctccaatccactatgatgaaagtgttacaaaag 1736305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 18552965 - 18552883
Alignment:
Q  1 tgttgacccagttcag-ccaatatggcctaatctggg--agagagcagctctccaatccaatatga-gaaagtgttacaaaag 79  Q
    |||||||||||||| | |||||||| |||||||||||  |||||||||| |||||||||| ||||| ||||||||||||||||    
T  18552965 tgttgacccagttcggtccaatatgacctaatctgggggagagagcagccctccaatccactatgatgaaagtgttacaaaag 18552883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 227 - 290
Target Start/End: Original strand, 18656614 - 18656677
Alignment:
Q  227 cccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacccat 290  Q
    |||||||||||||||||||||||||||||| |||| ||||||||| ||||| ||| || |||||    
T  18656614 cccaaggtgattacaatgtttttcccaacctaagaaacactctcatcaaaggcacacaccccat 18656677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 36029098 - 36029180
Alignment:
Q  1 tgttgacccagttcag-ccaatatggcctaatctgggagaga--gcagctctccaatccaatatga-gaaagtgttacaaaag 79  Q
    |||||||||||||| | |||||||| ||||||||||| ||||  |||||||||||||||| ||||| ||||||||||||||||    
T  36029098 tgttgacccagttctgtccaatatgacctaatctgggggagaaagcagctctccaatccactatgatgaaagtgttacaaaag 36029180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 220 - 288
Target Start/End: Complemental strand, 4386840 - 4386774
Alignment:
Q  220 ctcactacccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaaccc 288  Q
    |||||||| |||||||||||||||||||  ||||||||||||||  ||| | |||||||||||||||||    
T  4386840 ctcactactcaaggtgattacaatgttt--cccaacccaagagaacctcactacaaagacactcaaccc 4386774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 288
Target Start/End: Original strand, 16264355 - 16264638
Alignment:
Q  1 tgttgacccagttcag-ccaatatggcctaatctggg--agagagcagctctccaatccaatatga-gaaagtgttacaaaaggttgcaagaagctctag 96  Q
    |||||||| ||||| | |||||||| |||||||||||  ||||||||||||||||||||| ||||| ||||||||||||||  ||| ||||||  |  ||    
T  16264355 tgttgacctagttcggtccaatatgacctaatctgggggagagagcagctctccaatccactatgatgaaagtgttacaaagagttacaagaaaat--ag 16264452  T
Q  97 ctatcaagctttacacaaga-cagaccctagattctaccctttggtgtttccccactctcacaa-gatgaaccctaaaagagaagtcactagaggaagct 194  Q
    ||  |||||||  ||||||| ||   ||||  |||||| | || ||||| ||| |||||| ||| ||||||||||||  |||||| ||| | ||||||||    
T  16264453 cttgcaagcttc-cacaagaacaagacctaatttctacacatttgtgttaccc-actctctcaatgatgaaccctaa--gagaagacacaaaaggaagct 16264548  T
Q  195 ttaaatccttccaaccaatgaactcctcactacccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaaccc 288  Q
    ||  ||||||||||    |||| || ||||||||||||||| ||||||||  |||||||||||||||||  |||   |||||||||||||||||    
T  16264549 tttgatccttccaatgg-tgaaatc-tcactacccaaggtgtttacaatg--tttcccaacccaagagatcctcattacaaagacactcaaccc 16264638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 21711228 - 21711308
Alignment:
Q  1 tgttgacccagttcag-ccaatatggcctaatctggg--agagagcagctctccaatccaatatga-gaaagtgttacaaa 77  Q
    |||||||||||||| | |||||||| |||||||||||  |||||||||||||| |||||| ||||| ||||||||||||||    
T  21711228 tgttgacccagttcggtccaatatgacctaatctgggggagagagcagctctcaaatccactatgatgaaagtgttacaaa 21711308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 220 - 288
Target Start/End: Original strand, 36029316 - 36029382
Alignment:
Q  220 ctcactacccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaaccc 288  Q
    |||||||||||||||| |||||||||||  ||||||||||||||  ||| | |||||||||||||||||    
T  36029316 ctcactacccaaggtgtttacaatgttt--cccaacccaagagatcctcactacaaagacactcaaccc 36029382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 220 - 288
Target Start/End: Complemental strand, 40592645 - 40592579
Alignment:
Q  220 ctcactacccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaaccc 288  Q
    |||||||||||||||| |||||||||||  ||||||||||||||  ||| | |||||||||||||||||    
T  40592645 ctcactacccaaggtgtttacaatgttt--cccaacccaagagatcctcactacaaagacactcaaccc 40592579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 33386748 - 33386669
Alignment:
Q  1 tgttgacccagttcag-ccaatatggcctaatctggg--agagagcagctctccaatccaatatga-gaaagtgttacaa 76  Q
    |||||| ||||||| | |||||||| |||||||||||  ||||||||||||||||||||| ||||| |||||||||||||    
T  33386748 tgttgatccagttcggtccaatatgacctaatctgggggagagagcagctctccaatccactatgatgaaagtgttacaa 33386669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 3716084 - 3716002
Alignment:
Q  1 tgttgacccagttcag-ccaatatggcctaatctgggagagag--cagctctccaatccaatatga-gaaagtgttacaaaag 79  Q
    |||||||||||||| | |||||||| |||||||| ||||||||  ||||||||||||| | ||||| ||||||||||||||||    
T  3716084 tgttgacccagttcggtccaatatgacctaatctaggagagagagcagctctccaatctactatgatgaaagtgttacaaaag 3716002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 30709872 - 30709790
Alignment:
Q  1 tgttgacccagttcag-ccaatatggcctaatctggg--agagagcagctctccaatccaatatga-gaaagtgttacaaaag 79  Q
    |||||||||||||| | |||||||| |||||||||||  |||||||||| |||||||||| ||||| |||| |||||||||||    
T  30709872 tgttgacccagttcggtccaatatgacctaatctgggggagagagcagccctccaatccactatgatgaaattgttacaaaag 30709790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 40592864 - 40592782
Alignment:
Q  1 tgttgacccagttcag-ccaatatggcctaatctg--ggagagagcagctctccaatccaatatga-gaaagtgttacaaaag 79  Q
    |||||||||||||| | |||||||| |||||||||  |||||||| |||||||||||| | ||||| ||||||||||||||||    
T  40592864 tgttgacccagttcggtccaatatgacctaatctgtgggagagagaagctctccaatcgactatgatgaaagtgttacaaaag 40592782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 220 - 285
Target Start/End: Complemental strand, 47923767 - 47923704
Alignment:
Q  220 ctcactacccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaa 285  Q
    |||||||||||||||| ||||||||  |||||||||||||||||  ||| | ||||||||||||||    
T  47923767 ctcactacccaaggtgtttacaatg--tttcccaacccaagagattctcactacaaagacactcaa 47923704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 17 - 79
Target Start/End: Original strand, 48438236 - 48438301
Alignment:
Q  17 ccaatatggcctaatctggg--agagagcagctctccaatccaatatga-gaaagtgttacaaaag 79  Q
    |||||||| |||||||||||  |||||||||| |||||||||| ||||| ||||||||||||||||    
T  48438236 ccaatatgacctaatctgggggagagagcagccctccaatccactatgatgaaagtgttacaaaag 48438301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 220 - 288
Target Start/End: Complemental strand, 1736167 - 1736101
Alignment:
Q  220 ctcactacccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaaccc 288  Q
    |||||||||||||||| ||||||||  ||||||||||||| |||  ||| | |||||||||||||||||    
T  1736167 ctcactacccaaggtgtttacaatg--tttcccaacccaatagatcctcactacaaagacactcaaccc 1736101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 220 - 288
Target Start/End: Complemental strand, 3323554 - 3323488
Alignment:
Q  220 ctcactacccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaaccc 288  Q
    |||||||||||||||| ||||||||  |||||||||||||||||  ||| | | |||||||||||||||    
T  3323554 ctcactacccaaggtgtttacaatg--tttcccaacccaagagaacctcactataaagacactcaaccc 3323488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 220 - 288
Target Start/End: Complemental strand, 3328220 - 3328154
Alignment:
Q  220 ctcactacccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaaccc 288  Q
    |||||||||||||||| ||||||||||||  |||||||||||||  ||| | ||||||||| |||||||    
T  3328220 ctcactacccaaggtgtttacaatgtttt--ccaacccaagagaagctcactacaaagacattcaaccc 3328154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 220 - 288
Target Start/End: Complemental strand, 8370352 - 8370286
Alignment:
Q  220 ctcactacccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaaccc 288  Q
    ||||||||||||| || |||||||||||  ||||||||||||||  ||| | |||||||||||||||||    
T  8370352 ctcactacccaagatgtttacaatgttt--cccaacccaagagatcctcactacaaagacactcaaccc 8370286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 10207940 - 10207981
Alignment:
Q  1 tgttgacccagttcagccaatatggcctaatctgggagagag 42  Q
    ||||||||||||||||||||| |||||||||||||| |||||    
T  10207940 tgttgacccagttcagccaatgtggcctaatctgggggagag 10207981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 220 - 288
Target Start/End: Original strand, 21711445 - 21711511
Alignment:
Q  220 ctcactacccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaaccc 288  Q
    |||||||| ||||||| |||||||||||  ||||||||||||||  ||| | |||||||||||||||||    
T  21711445 ctcactactcaaggtgtttacaatgttt--cccaacccaagagatcctcactacaaagacactcaaccc 21711511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 220 - 288
Target Start/End: Complemental strand, 24695029 - 24694963
Alignment:
Q  220 ctcactacccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaaccc 288  Q
    ||||| |||||||||| |||||||||||  ||||||||||||||  ||| | |||||||||||||||||    
T  24695029 ctcaccacccaaggtgtttacaatgttt--cccaacccaagagatcctcactacaaagacactcaaccc 24694963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 220 - 288
Target Start/End: Original strand, 26299211 - 26299277
Alignment:
Q  220 ctcactacccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaaccc 288  Q
    |||||||||||||||| ||||||||  |||||||||||||||||  ||| | ||||||||| |||||||    
T  26299211 ctcactacccaaggtgtttacaatg--tttcccaacccaagagatcctcactacaaagacattcaaccc 26299277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 34 - 77
Target Start/End: Complemental strand, 6794759 - 6794715
Alignment:
Q  34 gggagagagcagctctccaatccaatatga-gaaagtgttacaaa 77  Q
    |||||||||||||||||||||||| ||||| ||||||||||||||    
T  6794759 gggagagagcagctctccaatccactatgatgaaagtgttacaaa 6794715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 17 - 79
Target Start/End: Original strand, 40844674 - 40844738
Alignment:
Q  17 ccaatatggcctaatctggg-agagagcagctctccaatccaatatga-gaaagtgttacaaaag 79  Q
    |||||||| ||||||||||| |||||||||| ||| |||||| ||||| ||||||||||||||||    
T  40844674 ccaatatgacctaatctggggagagagcagccctcaaatccactatgatgaaagtgttacaaaag 40844738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 220 - 286
Target Start/End: Original strand, 8126853 - 8126917
Alignment:
Q  220 ctcactacccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaac 286  Q
    |||||||||||||||| ||||||||  ||||||||||||||| |  ||| | |||||||||||||||    
T  8126853 ctcactacccaaggtgtttacaatg--tttcccaacccaagaaaacctcactacaaagacactcaac 8126917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 226 - 288
Target Start/End: Original strand, 23392106 - 23392166
Alignment:
Q  226 acccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaaccc 288  Q
    |||||||||| |||||||||||  ||||||||||||||  ||| | |||||||||||||||||    
T  23392106 acccaaggtgtttacaatgttt--cccaacccaagagaacctcactacaaagacactcaaccc 23392166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 227 - 277
Target Start/End: Complemental strand, 2672835 - 2672783
Alignment:
Q  227 cccaaggtgattacaatgtt--tttcccaacccaagagacactctcaacaaag 277  Q
    ||||||||||||||||||||  |||||||||| |||| ||||||||| |||||    
T  2672835 cccaaggtgattacaatgttgttttcccaacctaagaaacactctcatcaaag 2672783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 227 - 277
Target Start/End: Complemental strand, 2676991 - 2676939
Alignment:
Q  227 cccaaggtgattacaatgtt--tttcccaacccaagagacactctcaacaaag 277  Q
    ||||||||||||||||||||  |||||||||| |||| ||||||||| |||||    
T  2676991 cccaaggtgattacaatgttgttttcccaacctaagaaacactctcatcaaag 2676939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 220 - 288
Target Start/End: Complemental strand, 6794578 - 6794512
Alignment:
Q  220 ctcactacccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaaccc 288  Q
    |||||||||||||||| ||||||||  ||||||||| |||||||  ||| | |||| ||||||||||||    
T  6794578 ctcactacccaaggtgtttacaatg--tttcccaactcaagagaacctcactacaatgacactcaaccc 6794512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 227 - 277
Target Start/End: Original strand, 8512398 - 8512450
Alignment:
Q  227 cccaaggtgattacaatgt--ttttcccaacccaagagacactctcaacaaag 277  Q
    |||||||||||||||||||  ||||||||||| |||| ||||||||| |||||    
T  8512398 cccaaggtgattacaatgttgttttcccaacctaagatacactctcatcaaag 8512450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 227 - 277
Target Start/End: Original strand, 8517278 - 8517330
Alignment:
Q  227 cccaaggtgattacaatgt--ttttcccaacccaagagacactctcaacaaag 277  Q
    |||||||||||||||||||  ||||||||||| |||| ||||||||| |||||    
T  8517278 cccaaggtgattacaatgttgttttcccaacctaagatacactctcatcaaag 8517330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 220 - 261
Target Start/End: Original strand, 10274605 - 10274646
Alignment:
Q  220 ctcactacccaaggtgattacaatgtttttcccaacccaaga 261  Q
    ||||||||||||||||| || ||||| |||||||||||||||    
T  10274605 ctcactacccaaggtgaatataatgtgtttcccaacccaaga 10274646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 227 - 277
Target Start/End: Original strand, 24968288 - 24968340
Alignment:
Q  227 cccaaggtgattacaatgt--ttttcccaacccaagagacactctcaacaaag 277  Q
    |||||||||||||||||||  ||||||||||| |||| ||||||||| |||||    
T  24968288 cccaaggtgattacaatgttgttttcccaacctaagatacactctcatcaaag 24968340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 220 - 288
Target Start/End: Original strand, 35925701 - 35925767
Alignment:
Q  220 ctcactacccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaaccc 288  Q
    |||||||||||||||| ||||||||  ||||||||||||| |||  ||| | ||||||||| |||||||    
T  35925701 ctcactacccaaggtgtttacaatg--tttcccaacccaaaagatcctcactacaaagacattcaaccc 35925767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 220 - 288
Target Start/End: Complemental strand, 39032417 - 39032352
Alignment:
Q  220 ctcactacccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaaccc 288  Q
    |||||||||||||||| ||||||||  ||| |||||||||||||  ||| | |||||||||||||||||    
T  39032417 ctcactacccaaggtgtttacaatg--tttaccaacccaagaga-tctcactacaaagacactcaaccc 39032352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 1417572 - 1417493
Alignment:
Q  1 tgttgacccagttcag-ccaatatggcctaatct--gggagagagcagctctccaatccaatatg-agaaagtgttacaa 76  Q
    |||||||||||||| | |||||||| ||||||||  ||||||||||| | |||||||||| || | ||||||||||||||    
T  1417572 tgttgacccagttcggtccaatatgacctaatctgggggagagagcatccctccaatccactaagaagaaagtgttacaa 1417493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 229 - 288
Target Start/End: Original strand, 23410529 - 23410586
Alignment:
Q  229 caaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaaccc 288  Q
    ||||||| ||||||||||||  |||||||||||||  ||| | |||||||||||||||||    
T  23410529 caaggtgtttacaatgtttt--ccaacccaagagaacctcactacaaagacactcaaccc 23410586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 39040074 - 39039995
Alignment:
Q  1 tgttgacccagttcag-ccaatatggcctaatctggg--agagagcagctctccaatccaatatga-gaaagtgttacaa 76  Q
    |||||||| ||||| | |||||||| |||||||||||  ||||| || |||||||||||| ||||| |||||||||||||    
T  39040074 tgttgacctagttcggtccaatatgacctaatctggggaagagaacaactctccaatccactatgatgaaagtgttacaa 39039995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 218; Significance: 1e-120; HSPs: 48)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 218; E-Value: 1e-120
Query Start/End: Original strand, 1 - 305
Target Start/End: Original strand, 24741946 - 24742253
Alignment:
Q  1 tgttgacccagttcagccaatatggcctaatctggg--agagagcagctctccaatccaatatga-gaaagtgttacaaaaggttgcaagaagctctagc 97  Q
    ||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||| |||||||||||||| |||| |||||| |  ||||    
T  24741946 tgttgacccagttcagccaatatggcctaatctgggggagagagcagctctccaatccaatatgatgaaagtgttacaaagggttacaagaaacaatagc 24742045  T
Q  98 tatcaagctttacacaaga-cagaccctagattctaccctttggtgtttccccactctcacaagatgaaccctaaaagagaagtcactagaggaagcttt 196  Q
      |||||||| |||||||| || |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||    
T  24742046 cttcaagctt-acacaagaacaaaccctagattctaccctttggtgtttccccactctcacaatatgaaccctaaaagagaagacactagaggaagcttt 24742144  T
Q  197 aaatccttccaaccaatgaactcctcactacccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacccattggttc 296  Q
    | ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||    
T  24742145 agatccttccaactaatgaactcctcactacccaaggtgattacaatgtttttcccaacccaagagacactctctacaaagacactcaaccctttggttc 24742244  T
Q  297 cctcctttg 305  Q
    |||||||||    
T  24742245 cctcctttg 24742253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 182; E-Value: 2e-98
Query Start/End: Original strand, 1 - 305
Target Start/End: Original strand, 29760647 - 29760954
Alignment:
Q  1 tgttgacccagttcagccaatatggcctaatctggg--agagagcagctctccaatccaatatga-gaaagtgttacaaaaggttgcaagaagctctagc 97  Q
    ||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||| |||||||||||||| |||| |||||| |  ||||    
T  29760647 tgttgacccagttcagccaatatggcctaatctgggggagagagcagctctccaatccaatatgatgaaagtgttacaaagggttacaagaaacaatagc 29760746  T
Q  98 tatcaagctttacacaagacagac--cctagattctaccctttggtgtttccccactctcacaagatgaaccctaaaagagaagtcactagaggaagctt 195  Q
       ||||||| |||||||| | |   |||||||||||||||||||||||||||||||||||||  |||||||||||  |||||| |||||||||||||||    
T  29760747 ctgcaagctt-acacaagaaacaagacctagattctaccctttggtgtttccccactctcacactatgaaccctaa--gagaagacactagaggaagctt 29760843  T
Q  196 taaatccttccaaccaatgaactcctcactacccaaggtgattacaatg-tttttcccaacccaagagacactctcaacaaagacactcaacccattggt 294  Q
    || ||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||| |||||    
T  29760844 tagatccttccaactaatgaactcctcactacccaaggtgattacaatgttttttcccaacccaagagacactctctacaaagacactcaaccctttggt 29760943  T
Q  295 tccctcctttg 305  Q
    |||||||||||    
T  29760944 tccctcctttg 29760954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 1 - 173
Target Start/End: Complemental strand, 9224486 - 9224312
Alignment:
Q  1 tgttgacccagttcagccaatatggcctaatctggg--agagagcagctctccaatccaatatgagaaagtgttacaaaaggttgcaagaagctctagct 98  Q
    ||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||  ||||| |||||||     
T  9224486 tgttgacccagttcagccaatatggcctaatctgggggagagagcagctctccaatccaatatgagaaagtgttacaaaaggttagaagaa-ctctagcc 9224388  T
Q  99 atcaagctttacacaag-acagaccctagattctaccctttggtgtttccccactctcacaagatgaaccctaaaa 173  Q
     |||||||||||||| | ||| |||||||| ||||||||||||||||||||||||||||||  |||||||||||||    
T  9224387 ttcaagctttacacatgaacaaaccctagactctaccctttggtgtttccccactctcacactatgaaccctaaaa 9224312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 1 - 173
Target Start/End: Original strand, 51520463 - 51520637
Alignment:
Q  1 tgttgacccagttcagccaatatggcctaatctggg--agagagcagctctccaatccaatatgagaaagtgttacaaaaggttgcaagaagctctagct 98  Q
    |||||||||||||| |||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||     
T  51520463 tgttgacccagttctgccaatatggcctaatctgggggagagagcagctctccaatccaatatgagaaagtgttacaaaaggttacaagaa-ctctagcc 51520561  T
Q  99 atcaagctttacacaag-acagaccctagattctaccctttggtgtttccccactctcacaagatgaaccctaaaa 173  Q
     |||||||||||||| | ||| ||||||||||||||||||||||||||||||||||||  || |||||||||||||    
T  51520562 ttcaagctttacacatgaacaaaccctagattctaccctttggtgtttccccactctcttaatatgaaccctaaaa 51520637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 109; E-Value: 8e-55
Query Start/End: Original strand, 1 - 173
Target Start/End: Complemental strand, 9229273 - 9229099
Alignment:
Q  1 tgttgacccagttcagccaatatggcctaatctggg--agagagcagctctccaatccaatatgagaaagtgttacaaaaggttgcaagaagctctagct 98  Q
    |||| |||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||  ||||| |||||||     
T  9229273 tgttaacccagttcagccaatatggcctaatctgggggagagagcagctctccaatccaatatgagaaagtgttacaaaaggttagaagaa-ctctagcc 9229175  T
Q  99 atcaagctttacacaag-acagaccctagattctaccctttggtgtttccccactctcacaagatgaaccctaaaa 173  Q
     |||||||||||||| | ||| |||||||| ||||||||||||||||||||||||||||||  |||||||||||||    
T  9229174 ttcaagctttacacatgaacaaaccctagactctaccctttggtgtttccccactctcacactatgaaccctaaaa 9229099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 109; E-Value: 8e-55
Query Start/End: Original strand, 1 - 172
Target Start/End: Complemental strand, 45357375 - 45357203
Alignment:
Q  1 tgttgacccagttcagccaatatggcctaatctggg--agagagcagctctccaatccaatatgagaaagtgttacaaaaggttgcaagaagctctagct 98  Q
    |||||||||||||||||||||||||| |||||||||  |||||||||||||||||||||||||||||||||||||||||||||| |||||  ||||||||    
T  45357375 tgttgacccagttcagccaatatggcataatctgggggagagagcagctctccaatccaatatgagaaagtgttacaaaaggttacaaga--ctctagct 45357278  T
Q  99 atcaagctttacacaag-acagaccctagattctaccctttggtgtttccccactctcacaagatgaaccctaaa 172  Q
     |||||||||||||| | ||| |||||||||||||||||||||| ||| ||||||||||||  ||||||||||||    
T  45357277 ttcaagctttacacatgaacaaaccctagattctaccctttggtattttcccactctcacactatgaaccctaaa 45357203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 104; E-Value: 8e-52
Query Start/End: Original strand, 1 - 172
Target Start/End: Complemental strand, 45347896 - 45347723
Alignment:
Q  1 tgttgacccagttcagccaatatggcctaatctggg--agagagcagctctccaatccaatatgagaaagtgttacaaaaggttgcaagaagctctagct 98  Q
    |||||||||||||||||||||||||| |||||||||  |||||||||||||||||||||||||||||||||||||||||||||| |||| | |||||||     
T  45347896 tgttgacccagttcagccaatatggcttaatctgggggagagagcagctctccaatccaatatgagaaagtgttacaaaaggttacaag-acctctagcc 45347798  T
Q  99 atcaagctttacacaag-acagaccctagattctaccctttggtgtttccccactctcacaagatgaaccctaaa 172  Q
     |||||||||||||| | ||| |||||||||||||||||||||| ||| ||||||||||||  ||||||||||||    
T  45347797 ttcaagctttacacatgaacaaaccctagattctaccctttggtattttcccactctcacactatgaaccctaaa 45347723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 1 - 173
Target Start/End: Original strand, 3814030 - 3814202
Alignment:
Q  1 tgttgacccagttcagccaatatggcctaatctggg--agagagcagctctccaatccaatatgagaaagtgttacaaaaggttgcaagaagctctagct 98  Q
    ||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||| ||||||||||||||||||| |||||  ||||||||    
T  3814030 tgttgacccagttcagccaatatggcctaatctgggggagagagcagctctccaatccaatatgtgaaagtgttacaaaaggttacaaga--ctctagct 3814127  T
Q  99 atcaagctttacacaag-acagaccctagattctaccctttggtgtttccccactctcacaagatgaaccctaaaa 173  Q
     |||||||||||||| | ||| |||||||| ||||||||||||| ||| ||||||||||||  |||||||||||||    
T  3814128 ttcaagctttacacatgaacaaaccctaga-tctaccctttggtattttcccactctcacactatgaaccctaaaa 3814202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 1 - 158
Target Start/End: Original strand, 5732671 - 5732828
Alignment:
Q  1 tgttgacccagttcagccaatatggcctaatctggg--agagagcagctctccaatccaatatgagaaagtgttacaaaaggttgcaagaagctctagct 98  Q
    ||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||| |||||  ||||||||    
T  5732671 tgttgacccagttcagccaatatggcctaatctgggggagagagcagctctccaatccaatatgagaaagtgttacaaaaggttacaaga--ctctagct 5732768  T
Q  99 atcaagctttacacaag-acagaccctagattctaccctttggtgtttccccactctcaca 158  Q
     |||||||||||||| | ||| |||||||| ||||||||||||| ||| ||||||||||||    
T  5732769 ttcaagctttacacatgaacaaaccctaga-tctaccctttggtattttcccactctcaca 5732828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 1 - 305
Target Start/End: Complemental strand, 28468620 - 28468325
Alignment:
Q  1 tgttgacccagttcagccaatatggcctaatctgg--gagagagcagctctccaatccaatatga-gaaagtgttacaaaaggttgcaagaagctctagc 97  Q
    |||||||||||||||||||||||| ||||||||||  |||||||||||||||||||||| ||||| ||||||||||||| |      || ||    |||     
T  28468620 tgttgacccagttcagccaatatgacctaatctggaggagagagcagctctccaatccactatgatgaaagtgttacaaga------aaaaa----tagt 28468531  T
Q  98 tatcaagctttacacaaga-cagaccctagattctaccctttggtgtttccccactctcacaagatgaaccctaaaagagaagtcactagaggaagcttt 196  Q
    |  ||||||| |||||| | ||   |||||||||||||| || |||||||||||||||| ||| ||||||||||||||||||| ||| ||||||||||||    
T  28468530 ttgcaagctt-acacaataacaagacctagattctacccatttgtgtttccccactctctcaatatgaaccctaaaagagaagacacaagaggaagcttt 28468432  T
Q  197 aaatccttccaaccaatgaactcctcactacccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacccattggttc 296  Q
    | ||||||||||    |||| | |||||||||||||||| ||||||| |||||||||||||||||||  ||| | ||||||||||| |||||    ||||    
T  28468431 agatccttccaa-tggtgaaat-ctcactacccaaggtgtttacaatatttttcccaacccaagagatcctcactacaaagacacttaaccctagagttc 28468334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 1 - 168
Target Start/End: Original strand, 18855733 - 18855900
Alignment:
Q  1 tgttgacccagttcagccaatatggcctaatct--gggagagagcagctctccaatccaatatgagaaagtgttacaaaaggttgcaagaagctctagc- 97  Q
    |||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||| | ||||||||||||||||| |||||  |||||||     
T  18855733 tgttgacccagttcagccaatatggcctaatctgggggagagagcagctctccaatccaatatgtg-aagtgttacaaaaggttacaaga--ctctagct 18855829  T
Q  98 tatcaagctttacacaag-acagaccctagattctaccctttggtgtttccccactctcacaagatgaaccc 168  Q
    |||||||||||||||| | ||| ||||||||  |||||||||||| ||| ||||||||||||  ||||||||    
T  18855830 tatcaagctttacacatgaacaaaccctaga-actaccctttggtattttcccactctcacactatgaaccc 18855900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 226 - 304
Target Start/End: Original strand, 51520637 - 51520715
Alignment:
Q  226 acccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacccattggttccctccttt 304  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  51520637 acccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacccattggttccctccttt 51520715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 226 - 307
Target Start/End: Complemental strand, 18712671 - 18712590
Alignment:
Q  226 acccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacccattggttccctcctttgct 307  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18712671 acccaaggtgataacaatgtttttcccaacccaagagacactctcaacaaagacactcaacccattggttccctcctttgct 18712590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 8 - 113
Target Start/End: Complemental strand, 56146783 - 56146677
Alignment:
Q  8 ccagttcagccaatatggcctaatctggg--agagagcagctctccaatccaatatgagaaagtgttacaaaaggttgcaagaagctctagctatcaagc 105  Q
    |||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||  ||||||    
T  56146783 ccagttcagccaatatggcctaatctgggggagagagcagctctccaatccaatatgagaaagtgttacaaaaggttacaagaa-ctctagccttcaagc 56146685  T
Q  106 tttacaca 113  Q
    ||||||||    
T  56146684 tttacaca 56146677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 226 - 307
Target Start/End: Complemental strand, 9224312 - 9224231
Alignment:
Q  226 acccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacccattggttccctcctttgct 307  Q
    ||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9224312 acccaaggtgattacaatgttttcccaaacccaagagacactctcaacaaagacactcaacccattggttccctcctttgct 9224231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 226 - 307
Target Start/End: Complemental strand, 9229099 - 9229018
Alignment:
Q  226 acccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacccattggttccctcctttgct 307  Q
    ||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9229099 acccaaggtgattacaatgttttcccaaacccaagagacactctcaacaaagacactcaacccattggttccctcctttgct 9229018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 1 - 305
Target Start/End: Complemental strand, 31985725 - 31985424
Alignment:
Q  1 tgttgacccagttcag-ccaatatggcctaatctggg-agagagcagctctccaatccaatatga-gaaagtgttacaaaaggttgcaagaagctctagc 97  Q
    |||||||||||||| | |||||||| ||||||||||| ||||||||||||||||||||| ||||| |||||||||||||| |||| ||||||    ||||    
T  31985725 tgttgacccagttcggtccaatatgacctaatctggggagagagcagctctccaatccactatgatgaaagtgttacaaagggttacaagaa-aaatagc 31985627  T
Q  98 tatcaagctttacacaag-acagaccctagattctaccctttggtgtttccccactctcacaagatgaaccctaaaagagaagtcactagaggaagcttt 196  Q
    |  ||||| ||||||||| |||   ||||  |||||||| || |||||| |||||||||||||  |||||||||||||||||| ||| | ||||||||||    
T  31985626 ttgcaagc-ttacacaagaacaagtcctaatttctacccatttgtgttt-cccactctcacaatgtgaaccctaaaagagaagacacaaaaggaagcttt 31985529  T
Q  197 aaatccttccaaccaatgaactcctcactacccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacccattggttc 296  Q
      |||||||| |    |||| |  ||||||||||||||| ||||||||  |||||||||||||||||  |||   ||||| |||||||||||    ||||    
T  31985528 tgatccttccca-tggtgaaat-ttcactacccaaggtgtttacaatg--tttcccaacccaagagatcctcaatacaaaaacactcaaccctaaagttc 31985433  T
Q  297 cctcctttg 305  Q
    |||||||||    
T  31985432 cctcctttg 31985424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 226 - 305
Target Start/End: Original strand, 3814202 - 3814281
Alignment:
Q  226 acccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacccattggttccctcctttg 305  Q
    ||||||||||||||||||||||||||||||| |||| ||||||||| ||||||||| || ||||| || |||||||||||    
T  3814202 acccaaggtgattacaatgtttttcccaacctaagaaacactctcatcaaagacacacaccccataggatccctcctttg 3814281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 227 - 290
Target Start/End: Complemental strand, 45347721 - 45347658
Alignment:
Q  227 cccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacccat 290  Q
    |||||||||||||||||||||||||||||| |||||||||||||| ||||| ||| || |||||    
T  45347721 cccaaggtgattacaatgtttttcccaacctaagagacactctcatcaaaggcacacaccccat 45347658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 288
Target Start/End: Complemental strand, 16623385 - 16623101
Alignment:
Q  1 tgttgacccagttcagc-caatatggcctaatctgg--gagagagcagctctccaatccaatatga-gaaagtgttacaaaag-gttgcaagaagctcta 95  Q
    |||||||||||||| |  ||||||| ||||||||||  |||||||||||||||||||||| ||||| |||||||||||||||| ||| ||||||    ||    
T  16623385 tgttgacccagttcggttcaatatgacctaatctggaggagagagcagctctccaatccactatgatgaaagtgttacaaaagagttacaagaa--atta 16623288  T
Q  96 gctatcaagctttacacaag-acagaccctagattctaccc-tttggtgtttccccactctcacaagatgaaccctaaaagagaagtcactagaggaagc 193  Q
    ||||  |||| ||||| ||| |||   ||||  |||||||| ||| ||| |  ||||||||||||| ||||| ||||||||| ||  ||| | |||||||    
T  16623287 gctaataagc-ttacagaagaacaagacctaatttctacccattttgtg-tcacccactctcacaatatgaatcctaaaagaaaa--cacaaaaggaagc 16623192  T
Q  194 tttaaatccttccaaccaatgaactcctcactacccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaaccc 288  Q
    |||  ||||||||||    |||| | |||||||||||||||| ||||||||  |||||||||||||||||  ||| | |||||||||||||||||    
T  16623191 ttttgatccttccaa-tggtgaaat-ctcactacccaaggtgtttacaatg--tttcccaacccaagagatcctcactacaaagacactcaaccc 16623101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 36315321 - 36315241
Alignment:
Q  1 tgttgacccagttcag-ccaatatggcctaatctggg--agagagcagctctccaatccaatatga-gaaagtgttacaaa 77  Q
    |||||||||||||| | |||||||| |||||||||||  ||||||||||||||||||||| ||||| ||||||||||||||    
T  36315321 tgttgacccagttcggtccaatatgacctaatctgggggagagagcagctctccaatccactatgatgaaagtgttacaaa 36315241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 36329530 - 36329450
Alignment:
Q  1 tgttgacccagttcag-ccaatatggcctaatctggg--agagagcagctctccaatccaatatga-gaaagtgttacaaa 77  Q
    |||||||||||||| | |||||||| |||||||||||  ||||||||||||||||||||| ||||| ||||||||||||||    
T  36329530 tgttgacccagttcggtccaatatgacctaatctgggggagagagcagctctccaatccactatgatgaaagtgttacaaa 36329450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 288
Target Start/End: Complemental strand, 5396763 - 5396479
Alignment:
Q  1 tgttgacccagttcag-ccaatatggcctaatctgg--gagagagcagctctccaatccaatatga-gaaagtgttacaaaaggttgcaagaagctctag 96  Q
    |||||||||||||| | |||||||| ||||||||||  |||||||||||||||||||||| ||||| ||||||||| ||||  ||| ||||||  |  ||    
T  5396763 tgttgacccagttcggtccaatatgacctaatctggaggagagagcagctctccaatccactatgatgaaagtgttgcaaagagttacaagaaaat--ag 5396666  T
Q  97 ctatcaagctttacacaaga-cagaccctagattctaccctttggtgtttccccactctcacaa-gatgaaccctaaaagagaagtcactagaggaagct 194  Q
    ||  ||||||| |||||||| ||   ||||  |||||||| || ||||| | | |||||| ||| ||||||||||||| |||||| ||| | || |||||    
T  5396665 cttgcaagctt-acacaagaacaagacctaatttctacccatttgtgttactc-actctctcaatgatgaaccctaaa-gagaagacacaaaagaaagct 5396569  T
Q  195 ttaaatccttccaaccaatgaactcctcactacccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaaccc 288  Q
    ||  || |||||||    |||| || ||||||||||||||| |||||||||||  ||||||||||||||  ||| | |||||||||||||||||    
T  5396568 tttgattcttccaatgg-tgaaatc-tcactacccaaggtgtttacaatgttt--cccaacccaagagatcctcactacaaagacactcaaccc 5396479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 227 - 290
Target Start/End: Original strand, 5732844 - 5732907
Alignment:
Q  227 cccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacccat 290  Q
    |||||||||||||||||||||||||||||| |||| ||||||||| ||||| ||| || |||||    
T  5732844 cccaaggtgattacaatgtttttcccaacctaagaaacactctcatcaaaggcacacaccccat 5732907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 6743507 - 6743425
Alignment:
Q  1 tgttgacccagttcag-ccaatatggcctaatct--gggagagagcagctctccaatccaatatga-gaaagtgttacaaaag 79  Q
    |||||||||||||| | |||||||| ||||||||  ||||||||||||| |||||||||| ||||| ||||||||||||||||    
T  6743507 tgttgacccagttcggtccaatatgacctaatctacgggagagagcagccctccaatccactatgatgaaagtgttacaaaag 6743425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 10047384 - 10047466
Alignment:
Q  1 tgttgacccagttcag-ccaatatggcctaatctggg--agagagcagctctccaatccaatatga-gaaagtgttacaaaag 79  Q
    |||||||||||||| | |||||||| |||||||||||  |||||||||| |||||||||| ||||| ||||||||||||||||    
T  10047384 tgttgacccagttcggtccaatatgacctaatctgggggagagagcagccctccaatccactatgatgaaagtgttacaaaag 10047466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 147 - 288
Target Start/End: Complemental strand, 16628815 - 16628680
Alignment:
Q  147 cccactctcacaagatgaaccctaaaagagaagtcactagaggaagctttaaatccttccaaccaatgaactcctcactacccaaggtgattacaatgtt 246  Q
    ||||||||||||| ||||| ||||||||| ||  ||| | ||||||||||  ||||||||||    |||| || ||||||||||||||| ||||||||||    
T  16628815 cccactctcacaatatgaatcctaaaagaaaa--cacaaaaggaagcttttgatccttccaatgg-tgaaatc-tcactacccaaggtgtttacaatgtt 16628720  T
Q  247 tttcccaacccaagagacactctcaacaaagacactcaaccc 288  Q
    |  ||||||||||||||  ||| | |||||||||||||||||    
T  16628719 t--cccaacccaagagatcctcactacaaagacactcaaccc 16628680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 39245999 - 39246081
Alignment:
Q  1 tgttgacccagttcag-ccaatatggcctaatctggg--agagagcagctctccaatccaatatga-gaaagtgttacaaaag 79  Q
    |||||||||||||| | |||||||| |||||||||||  |||||||||| |||||||||| ||||| ||||||||||||||||    
T  39245999 tgttgacccagttcggtccaatatgacctaatctgggggagagagcagccctccaatccactatgatgaaagtgttacaaaag 39246081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 220 - 285
Target Start/End: Original strand, 5112460 - 5112523
Alignment:
Q  220 ctcactacccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaa 285  Q
    |||||||||||||||| |||||||||||  ||||||||||||||  ||| ||||||||||||||||    
T  5112460 ctcactacccaaggtgtttacaatgttt--cccaacccaagagaacctcacaacaaagacactcaa 5112523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 220 - 288
Target Start/End: Original strand, 3777772 - 3777838
Alignment:
Q  220 ctcactacccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaaccc 288  Q
    |||||||||||||||| |||||||||||  ||||||||||||||  ||| | |||||||||||||||||    
T  3777772 ctcactacccaaggtgtttacaatgttt--cccaacccaagagatcctcactacaaagacactcaaccc 3777838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 38152531 - 38152449
Alignment:
Q  1 tgttgacccagttcag-ccaatatggcctaatctggg--agagagcagctctccaatccaatat-gagaaagtgttacaaaag 79  Q
    |||||||||||||| | |||||||| | |||||||||  ||||||||||||||||||||| ||| | ||||||||||||||||    
T  38152531 tgttgacccagttcggtccaatatgacataatctgggggagagagcagctctccaatccactatggtgaaagtgttacaaaag 38152449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 227 - 290
Target Start/End: Complemental strand, 45357201 - 45357138
Alignment:
Q  227 cccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacccat 290  Q
    |||||||||||||||||||||||||||||| |||| || |||||| ||||| ||| || |||||    
T  45357201 cccaaggtgattacaatgtttttcccaacctaagaaactctctcatcaaaggcacacaccccat 45357138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 5143264 - 5143345
Alignment:
Q  1 tgttgacccagttcag-ccaatatggcctaatctggg--agagagcagctctccaatccaatatga-gaaagtgttacaaaa 78  Q
    |||||||| ||||| | |||||||| |||||||||||  ||||||||||||||||| ||| ||||| |||||||||||||||    
T  5143264 tgttgacctagttcggtccaatatgacctaatctgggggagagagcagctctccaacccactatgatgaaagtgttacaaaa 5143345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 227 - 277
Target Start/End: Original strand, 18855906 - 18855956
Alignment:
Q  227 cccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaag 277  Q
    |||||||||||||||||||||||||||||| |||| || |||||| |||||    
T  18855906 cccaaggtgattacaatgtttttcccaacctaagaaactctctcatcaaag 18855956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 220 - 288
Target Start/End: Complemental strand, 5269074 - 5269008
Alignment:
Q  220 ctcactacccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaaccc 288  Q
    ||||||| |||||||| |||||||||||  ||||||||||||||  ||| | |||||||||||||||||    
T  5269074 ctcactatccaaggtgtttacaatgttt--cccaacccaagagatcctcactacaaagacactcaaccc 5269008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 220 - 288
Target Start/End: Original strand, 10047604 - 10047670
Alignment:
Q  220 ctcactacccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaaccc 288  Q
    |||||||||||||||| ||||||||  |||||||||||||||||  |||   |||||||||||||||||    
T  10047604 ctcactacccaaggtgtttacaatg--tttcccaacccaagagatcctcattacaaagacactcaaccc 10047670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 220 - 288
Target Start/End: Complemental strand, 25861907 - 25861841
Alignment:
Q  220 ctcactacccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaaccc 288  Q
    |||||||| ||||||| |||||||||||  ||||||||||||||  ||| | |||||||||||||||||    
T  25861907 ctcactactcaaggtgtttacaatgttt--cccaacccaagagatcctcactacaaagacactcaaccc 25861841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 220 - 288
Target Start/End: Complemental strand, 36315104 - 36315038
Alignment:
Q  220 ctcactacccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaaccc 288  Q
    |||||||||||| ||| |||||||||||  ||||||||||||||  ||||| ||||||||||| |||||    
T  36315104 ctcactacccaatgtgtttacaatgttt--cccaacccaagagatcctctctacaaagacactaaaccc 36315038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 220 - 288
Target Start/End: Complemental strand, 36329313 - 36329247
Alignment:
Q  220 ctcactacccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaaccc 288  Q
    |||||||||||| ||| |||||||||||  ||||||||||||||  ||||| ||||||||||| |||||    
T  36329313 ctcactacccaatgtgtttacaatgttt--cccaacccaagagatcctctctacaaagacactaaaccc 36329247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 5269283 - 5269204
Alignment:
Q  1 tgttgacccagttcag-ccaatatggcctaatctggg--agagagcagctctccaatccaatatga-gaaagtgttacaa 76  Q
    |||||||| ||||| | |||||||| |||||||||||  |||||||||| |||||||||| ||||| |||||||||||||    
T  5269283 tgttgacctagttcggtccaatatgacctaatctgggggagagagcagccctccaatccactatgatgaaagtgttacaa 5269204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 3796611 - 3796529
Alignment:
Q  1 tgttgacccagttcag-ccaatatggcctaatctggg--agagagcagctctccaatccaatatga-gaaagtgttacaaaag 79  Q
    |||||||||||||| | |||||||| |||||| ||||  |||||||| ||||| |||||| ||||| ||||||||||||||||    
T  3796611 tgttgacccagttccgtccaatatgacctaatatgggggagagagcaactctctaatccactatgatgaaagtgttacaaaag 3796529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 16630772 - 16630690
Alignment:
Q  1 tgttgacccagttcag-ccaatatggcctaatctgg--gagagagcagctctccaatccaatatga-gaaagtgttacaaaag 79  Q
    |||||||| ||||| | |||||||| | ||||||||  |||||| ||||||||||||||| ||||| ||||||||||||||||    
T  16630772 tgttgacctagttcggtccaatatgacataatctggaggagagaacagctctccaatccactatgatgaaagtgttacaaaag 16630690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 5147682 - 5147763
Alignment:
Q  1 tgttgacccagttcag-ccaatatggcctaatctgggagag--agcagctctccaatccaatatga-gaaagtgttacaaaa 78  Q
    |||||||||||||| | |||||||| |||||| |||| |||  |||||||||||| |||| ||||| |||||||||||||||    
T  5147682 tgttgacccagttcggtccaatatgacctaatttgggggagggagcagctctccagtccattatgatgaaagtgttacaaaa 5147763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 220 - 285
Target Start/End: Complemental strand, 6743289 - 6743226
Alignment:
Q  220 ctcactacccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaa 285  Q
    |||| ||||||||||| |||||||||||  ||||||||||||||  ||| | ||||||||||||||    
T  6743289 ctcattacccaaggtgtttacaatgttt--cccaacccaagagatcctcgctacaaagacactcaa 6743226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 34 - 79
Target Start/End: Original strand, 24333850 - 24333896
Alignment:
Q  34 gggagagagcagctctccaatccaatatga-gaaagtgttacaaaag 79  Q
    |||||||||||||||||||||||| ||||| ||| ||||||||||||    
T  24333850 gggagagagcagctctccaatccactatgatgaacgtgttacaaaag 24333896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 3777554 - 3777634
Alignment:
Q  1 tgttgacccagttcag-ccaatatggcctaatctgg--gagagagcagctctccaatccaatatga-gaaagtgttacaaa 77  Q
    |||||||||||||| | |||||||  |||||||| |  ||||||| |||||||||||||| ||||| ||||||||||||||    
T  3777554 tgttgacccagttcggtccaatataacctaatctagaggagagagtagctctccaatccactatgatgaaagtgttacaaa 3777634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 221 - 288
Target Start/End: Complemental strand, 38152311 - 38152246
Alignment:
Q  221 tcactacccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaaccc 288  Q
    ||||||||||||||| ||||||| |||  |||| |||||||||  ||| | |||||||||||||||||    
T  38152311 tcactacccaaggtgtttacaatattt--cccatcccaagagatcctcactacaaagacactcaaccc 38152246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 220 - 287
Target Start/End: Complemental strand, 42599448 - 42599383
Alignment:
Q  220 ctcactacccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacc 287  Q
    |||||||||||||||| ||| |||||||  ||||||| ||||||  ||| | ||||||||||||||||    
T  42599448 ctcactacccaaggtgtttagaatgttt--cccaaccgaagagaacctcactacaaagacactcaacc 42599383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 217; Significance: 1e-119; HSPs: 52)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 1 - 305
Target Start/End: Complemental strand, 20357638 - 20357331
Alignment:
Q  1 tgttgacccagttcagccaatatggcctaatctggg--agagagcagctctccaatccaatatgagaaagtgttacaaaaggttgcaagaagctctagct 98  Q
    ||||||||||||||||||||||||||||||| ||||  ||||||||||||||||||||||||||||||||||||||||| |||| |||||| |  ||||     
T  20357638 tgttgacccagttcagccaatatggcctaatttgggggagagagcagctctccaatccaatatgagaaagtgttacaaagggttacaagaaacaatagcc 20357539  T
Q  99 atcaagctttacacaaga-cagaccctagattctaccctttggtgtttccccactctcacaagatgaaccctaaaagagaagtcactagaggaagcttta 197  Q
     ||||||||||||||||| ||  ||||||||||||||| |  |||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||    
T  20357538 ttcaagctttacacaagaacatgccctagattctacccatatgtgtttccccactctcacaatatgaaccctaaaagagaagacactagaggaagcttta 20357439  T
Q  198 aatccttccaaccaatgaactcctcactacccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacccattggttcc 297  Q
     ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  20357438 gatccttccaactaatgaactcctcactacccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaaccctttggttcc 20357339  T
Q  298 ctcctttg 305  Q
    ||||||||    
T  20357338 ctcctttg 20357331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 186; E-Value: 1e-101
Query Start/End: Original strand, 1 - 305
Target Start/End: Original strand, 2057971 - 2058281
Alignment:
Q  1 tgttgacccagttcagccaatatggcctaatctggg--agagagcagctctccaatccaatatga-gaaagtgttacaaaaggttgcaagaagctctagc 97  Q
    ||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||| |||||||||||||| |||| |||||| |  ||||    
T  2057971 tgttgacccagttcagccaatatggcctaatctgggggagagagcagctctccaatccaatatgatgaaagtgttacaaagggttacaagaaacaatagc 2058070  T
Q  98 tatcaagctttacacaaga-cagaccctagattctaccctt-tggtgtttccccactctcacaagatgaaccctaaaagagaagtcactagaggaagctt 195  Q
      |||||||| |||||||| ||  ||||||||||||||| | || ||||||||||||||||||| ||||||||||||||||||| |||||||||||||||    
T  2058071 attcaagctt-acacaagaacaagccctagattctacccatatgttgtttccccactctcacaatatgaaccctaaaagagaagacactagaggaagctt 2058169  T
Q  196 taaatccttcc--aaccaatgaactcctcactacccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacccattgg 293  Q
    || ||||| ||  ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||    
T  2058170 tagatcctcccccaactaatgaactcctcactacccaaggtgattacaatgtttttcccaacccaagagacactctctacaaagacactcaaccctttgg 2058269  T
Q  294 ttccctcctttg 305  Q
    ||||||||||||    
T  2058270 ttccctcctttg 2058281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 184; E-Value: 1e-99
Query Start/End: Original strand, 1 - 305
Target Start/End: Complemental strand, 1533535 - 1533228
Alignment:
Q  1 tgttgacccagttcagccaatatggcctaatctggg--agagagcagctctccaatccaatatga-gaaagtgttacaaaaggttgcaagaagctctagc 97  Q
    ||||||||||||||||||||||||||||||||||||  |||||||| |||||||||||||||||| |||||||||||||| |||| |||||| |  ||||    
T  1533535 tgttgacccagttcagccaatatggcctaatctgggggagagagcatctctccaatccaatatgatgaaagtgttacaaagggttacaagaaacaatagc 1533436  T
Q  98 tatcaagctttacacaagacagac--cctagattctaccctttggtgtttccccactctcacaagatgaaccctaaaagagaagtcactagaggaagctt 195  Q
    |  ||||||| |||||||| | |   |||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||| |||||||||||||||    
T  1533435 ttgcaagctt-acacaagaaacaagacctagattctaccctttggtgttttcccactctcacaatatgaaccctaaaagagaagacactagaggaagctt 1533337  T
Q  196 taaatccttccaaccaatgaactcctcactacccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacccattggtt 295  Q
    || ||||||||||    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||    
T  1533336 tagatccttccaatgg-tgaactcctcactacccaaggtgattacaatgtttttcccaacccaagagacactctctacaaagacactcaaccctttggtt 1533238  T
Q  296 ccctcctttg 305  Q
    ||||||||||    
T  1533237 ccctcctttg 1533228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 134; E-Value: 9e-70
Query Start/End: Original strand, 1 - 305
Target Start/End: Original strand, 21639814 - 21640118
Alignment:
Q  1 tgttgacccagttcagccaatatggcctaatctggg--agagagcagctctccaatccaatatga-gaaagtgttacaaaaggttgcaagaagctctagc 97  Q
    ||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||| ||| | |||||||||||||| |||| ||||||    ||||    
T  21639814 tgttgacccagttcagccaatatggcctaatctgggggagagagcagctctccaatccactataatgaaagtgttacaaagggttacaagaaaaa-tagc 21639912  T
Q  98 tatcaagctttacacaaga-cagaccctagattctaccctttggtgtttccccactctcacaagatgaaccctaaaagagaagtcactagaggaagcttt 196  Q
    |  ||||||| |||||||| ||   |||||||||||||| || |||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||    
T  21639913 ttgcaagctt-acacaagaacaagacctagattctacccatttgtgtttccccactctcacaatatgaaccctaaaagagaagacactagaggaagcttt 21640011  T
Q  197 aaatccttccaaccaatgaactcctcactacccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacccattggttc 296  Q
    | ||||||||||    |||| | |||||||||||||||| |||||||||||||||||||||||||||  ||||| |||||||||||||||||    ||||    
T  21640012 agatccttccaa-tggtgaaat-ctcactacccaaggtgtttacaatgtttttcccaacccaagagatcctctctacaaagacactcaaccctagagttc 21640109  T
Q  297 cctcctttg 305  Q
    |||||||||    
T  21640110 cctcctttg 21640118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 1 - 288
Target Start/End: Original strand, 21646012 - 21646299
Alignment:
Q  1 tgttgacccagttcagccaatatggcctaatctggg--agagagcagctctccaatccaatatga-gaaagtgttacaaaaggttgcaagaagctctagc 97  Q
    ||||||||||||||||||||||||||||||||| ||  ||||||||||||||||||||| ||||| |||||||||| ||| |||| ||||||    ||||    
T  21646012 tgttgacccagttcagccaatatggcctaatctagggaagagagcagctctccaatccactatgatgaaagtgttaaaaagggttacaagaaaaa-tagc 21646110  T
Q  98 tatcaagctttacacaaga-cagaccctagattctaccctttggtgtttccccactctcacaagatgaaccctaaaagagaagtcactagaggaagcttt 196  Q
    |  ||||||| |||||||| ||   |||||||||||||| || |||||||||||||||||||| ||||||||||||||||||| |||||||||||| |||    
T  21646111 ttgcaagctt-acacaagaacaagacctagattctacccatttgtgtttccccactctcacaatatgaaccctaaaagagaagacactagaggaagattt 21646209  T
Q  197 aaatccttccaaccaatgaactcctcactacccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaaccc 288  Q
    | ||||||||||    |||| | |||||||||||||||| |||||||||||||||||||||||||||  ||||| |||||||||||||||||    
T  21646210 agatccttccaa-tggtgaaat-ctcactacccaaggtgtttacaatgtttttcccaacccaagagatcctctctacaaagacactcaaccc 21646299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 1 - 174
Target Start/End: Original strand, 12406337 - 12406512
Alignment:
Q  1 tgttgacccagttcagccaatatggcctaatctgggagagagca--gctctccaatccaatatgagaaagtgttacaaaaggttgcaagaagctctagct 98  Q
    |||||||||||||||||||||||||||||||||||| ||||| |  |||||||||||||||||||||||||||||||||||||| |||||| |||||||     
T  12406337 tgttgacccagttcagccaatatggcctaatctgggggagagaatagctctccaatccaatatgagaaagtgttacaaaaggttacaagaa-ctctagcc 12406435  T
Q  99 atcaagctttacacaaga-cagaccctagattctaccctttggtgtttccccactctcacaagatgaaccctaaaag 174  Q
     |||||||||||||| || || |||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  12406436 ttcaagctttacacatgaacaaaccctagattctaccctttggtgtttccccactctcacaatatgaaccctaaaag 12406512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 1 - 173
Target Start/End: Complemental strand, 24024405 - 24024232
Alignment:
Q  1 tgttgacccagttcagccaatatggcctaatctggg--agagagcagctctccaatccaatatgagaaagtgttacaaaaggttgcaagaagctctagct 98  Q
    ||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||| ||| |||||  |||||||     
T  24024405 tgttgacccagttcagccaatatggcctaatctgggggagagagcagctctccaatccaatatgagaaagtgttacaaaatgttacaaga--ctctagcc 24024308  T
Q  99 atcaagctttacacaag-acagaccctagattctaccctttggtgtttccccactctcacaagatgaaccctaaaa 173  Q
     |||||||||||||| | ||| |||||||||||||||||||||| ||| |||||||||||| ||||||||||||||    
T  24024307 ttcaagctttacacatgaacaaaccctagattctaccctttggtattttcccactctcacacgatgaaccctaaaa 24024232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 109; E-Value: 8e-55
Query Start/End: Original strand, 1 - 173
Target Start/End: Original strand, 12396917 - 12397091
Alignment:
Q  1 tgttgacccagttcagccaatatggcctaatctgggagagag--cagctctccaatccaatatgagaaagtgttacaaaaggttgcaagaagctctagct 98  Q
    |||||||||||||||||||||||||||||||||||| |||||  |||||||||||||||||||||||||||||||||||||||| |||||| |||||||     
T  12396917 tgttgacccagttcagccaatatggcctaatctgggggagagaacagctctccaatccaatatgagaaagtgttacaaaaggttacaagaa-ctctagcc 12397015  T
Q  99 atcaagctttacacaag-acagaccctagattctaccctttggtgtttccccactctcacaagatgaaccctaaaa 173  Q
     | || ||||||||| | ||| ||||||||||||||||||||||||||||||||| |||||| |||||||||||||    
T  12397016 tttaatctttacacatgaacaaaccctagattctaccctttggtgtttccccactatcacaatatgaaccctaaaa 12397091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 1 - 305
Target Start/End: Original strand, 18413646 - 18413948
Alignment:
Q  1 tgttgacccagttcagccaatatggcctaatct-gggagagagcagctctccaatccaatatga-gaaagtgttacaaaaggttgcaagaagctctagct 98  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||| |||||||||||||| |||| ||||||    ||| |    
T  18413646 tgttgacccagttcagccaatatggcctaatctggggagagagcagctctccaatccactatgatgaaagtgttacaaagggttacaagaa-aaatagat 18413744  T
Q  99 atcaagctttacacaag-acagaccctagattctaccctttggtgtttccccactctcacaagatgaaccctaaaagagaagtcactagaggaagcttta 197  Q
      ||||| ||||||||| |||   ||||| |||||||| || |||||||||||||||||||| |||||||||||||| |||| ||| ||||||||||| |    
T  18413745 tgcaagc-ttacacaagaacaagtcctagtttctacccatttgtgtttccccactctcacaatatgaaccctaaaag-gaagacacaagaggaagcttaa 18413842  T
Q  198 aatccttccaaccaatgaactcctcactacccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacccattggttcc 297  Q
     ||||||||||    |||| | |||||||||||||||| ||||| |||||||||||||||||||||  ||| | |||||||||||||||||    |||||    
T  18413843 gatccttccaa-tggtgaaat-ctcactacccaaggtgtttacattgtttttcccaacccaagagatcctcactacaaagacactcaaccctagagttcc 18413940  T
Q  298 ctcctttg 305  Q
    ||||||||    
T  18413941 ctcctttg 18413948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 1 - 305
Target Start/End: Original strand, 18408769 - 18409072
Alignment:
Q  1 tgttgacccagttcagccaatatggcctaatct--gggagagagcagctctccaatccaatatga-gaaagtgttacaaaaggttgcaagaagctctagc 97  Q
    |||||||||||||||||||||||||||||||||  |||||||||||||||||||||||| ||||| |||||||||||||| |||| ||||||    || |    
T  18408769 tgttgacccagttcagccaatatggcctaatctgggggagagagcagctctccaatccagtatgatgaaagtgttacaaagggttacaagaa-aaataac 18408867  T
Q  98 tatcaagctttacacaag-acagaccctagattctaccctttggtgtttccccactctcacaagatgaaccctaaaagagaagtcactagaggaagcttt 196  Q
    |  ||||| ||||||||| |||   ||||| |||||||| || |||||||||||||||||||| |||||||||||||| |||| ||| |||||||||||     
T  18408868 ttgcaagc-ttacacaagaacaagtcctagtttctacccatttgtgtttccccactctcacaatatgaaccctaaaag-gaagacacaagaggaagctta 18408965  T
Q  197 aaatccttccaaccaatgaactcctcactacccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacccattggttc 296  Q
    | ||||||  ||    |||| | |||||||||||||||| |||||||||||||||||||||||||||  ||| | |||||||||||||||||    ||||    
T  18408966 agatccttttaa-tggtgaaat-ctcactacccaaggtgtttacaatgtttttcccaacccaagagatcctcactacaaagacactcaaccctagagttc 18409063  T
Q  297 cctcctttg 305  Q
    |||||||||    
T  18409064 cctcctttg 18409072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 1 - 173
Target Start/End: Complemental strand, 31109662 - 31109489
Alignment:
Q  1 tgttgacccagttcagccaatatggcctaatct--gggagagagcagctctccaatccaatatgagaaagtgttacaaaaggttgcaagaagctctagct 98  Q
    |||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||| |||||  |||||||     
T  31109662 tgttgacccagttcagccaatatggcctaatctaggggagagagcagctctccaatccaatatgagaaagtgttacaaaaggttacaaga--ctctagcc 31109565  T
Q  99 atcaagctttacacaag-acagaccctagattctaccctttggtgtttccccactctcacaagatgaaccctaaaa 173  Q
     ||||||||| |||| | ||| |||||||||||||||||||| | ||| ||||||||||||  |||||||||||||    
T  31109564 ttcaagctttgcacatgaacaaaccctagattctaccctttgatattttcccactctcacactatgaaccctaaaa 31109489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 1 - 168
Target Start/End: Original strand, 19992319 - 19992487
Alignment:
Q  1 tgttgacccagttcagccaatatggcctaatctggg--agagagcagctctccaatccaatatgagaaagtgttacaaaaggttgcaagaagctctagc- 97  Q
    ||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||| ||||||||||||||||||| |||||  |||||||     
T  19992319 tgttgacccagttcagccaatatggcctaatctgggggagagagcagctctccaatccaatatgtgaaagtgttacaaaaggttacaaga--ctctagct 19992416  T
Q  98 tatcaagctttacacaag-acagaccctagattctaccctttggtgtttccccactctcacaagatgaaccc 168  Q
    |||||||||||||||| | ||| ||||||||  |||||||||||| ||| ||||||||||||  ||||||||    
T  19992417 tatcaagctttacacatgaacaaaccctaga-actaccctttggtattttcccactctcacactatgaaccc 19992487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 226 - 307
Target Start/End: Original strand, 12397091 - 12397172
Alignment:
Q  226 acccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacccattggttccctcctttgct 307  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12397091 acccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacccattggttccctcctttgct 12397172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 228 - 305
Target Start/End: Original strand, 4873310 - 4873387
Alignment:
Q  228 ccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacccattggttccctcctttg 305  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4873310 ccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacccattggttccctcctttg 4873387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 226 - 307
Target Start/End: Complemental strand, 31109489 - 31109407
Alignment:
Q  226 acccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacccat-tggttccctcctttgct 307  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  31109489 acccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacccatatggttccctcctttgct 31109407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 226 - 307
Target Start/End: Complemental strand, 24024232 - 24024151
Alignment:
Q  226 acccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacccattggttccctcctttgct 307  Q
    ||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24024232 acccacggtgattacaatgtttttccaaacccaagagacactctcaacaaagacactcaacccattggttccctcctttgct 24024151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 4866736 - 4866819
Alignment:
Q  1 tgttgacccagttcagccaatatggcctaatctggg--agagagcagctctccaatccaatatgagaaagtgttacaaaaggtt 82  Q
    ||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||    
T  4866736 tgttgacccagttcagccaatatggcctaatctgggggagagagcagctctccaatccaatatgagaaagtgttacaaaaggtt 4866819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 228 - 300
Target Start/End: Original strand, 12406513 - 12406585
Alignment:
Q  228 ccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacccattggttccctc 300  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12406513 ccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacccattggttccctc 12406585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 24261402 - 24261283
Alignment:
Q  1 tgttgacccagttcagccaatatggcctaatctggg--agagagcagctctccaatccaatatgagaaagtgttacaaaag-gttgcaagaagctctagc 97  Q
    ||||||||||||||||||||| ||||||||||||||  |||||||||||||||||||||||||| ||| |||||||||||| ||| ||||||  ||||||    
T  24261402 tgttgacccagttcagccaatgtggcctaatctgggggagagagcagctctccaatccaatatgtgaatgtgttacaaaagagttacaagaa--tctagc 24261305  T
Q  98 -tatcaagctttacacaagaca 118  Q
     |||||||||||||||||||||    
T  24261304 ttatcaagctttacacaagaca 24261283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 24266281 - 24266162
Alignment:
Q  1 tgttgacccagttcagccaatatggcctaatctggg--agagagcagctctccaatccaatatgagaaagtgttacaaaag-gttgcaagaagctctagc 97  Q
    ||||||||||||||||||||| ||||||||||||||  |||||||||||||||||||||||||| ||| |||||||||||| ||| ||||||  ||||||    
T  24266281 tgttgacccagttcagccaatgtggcctaatctgggggagagagcagctctccaatccaatatgtgaatgtgttacaaaagagttacaagaa--tctagc 24266184  T
Q  98 -tatcaagctttacacaagaca 118  Q
     |||||||||||||||||||||    
T  24266183 ttatcaagctttacacaagaca 24266162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 16880079 - 16880197
Alignment:
Q  1 tgttgacccagttcagccaatatggcctaatct--gggagagagcagctctccaatccaatatgagaaagtgttacaaaaggttgcaagaagctctagc- 97  Q
    ||||||||||||||||||||| |||||||||||  ||||||||||||||||||||||||||||| ||| || |||||||  ||| ||||||  ||||||     
T  16880079 tgttgacccagttcagccaatgtggcctaatctgggggagagagcagctctccaatccaatatgtgaatgttttacaaagagttacaagaa--tctagct 16880176  T
Q  98 tatcaagctttacacaagaca 118  Q
    |||||||||||||||||||||    
T  16880177 tatcaagctttacacaagaca 16880197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 16884935 - 16885053
Alignment:
Q  1 tgttgacccagttcagccaatatggcctaatct--gggagagagcagctctccaatccaatatgagaaagtgttacaaaaggttgcaagaagctctagc- 97  Q
    ||||||||||||||||||||| |||||||||||  ||||||||||||||||||||||||||||| ||| || |||||||  ||| ||||||  ||||||     
T  16884935 tgttgacccagttcagccaatgtggcctaatctgggggagagagcagctctccaatccaatatgtgaatgttttacaaagagttacaagaa--tctagct 16885032  T
Q  98 tatcaagctttacacaagaca 118  Q
    |||||||||||||||||||||    
T  16885033 tatcaagctttacacaagaca 16885053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 168
Target Start/End: Complemental strand, 21812317 - 21812149
Alignment:
Q  1 tgttgacccagttcagccaatatggcctaatct--gggagagagcagctctccaatccaatatgagaaagtgttacaaaaggttgcaagaagctctagc- 97  Q
    ||||||||||||||||||||| |||||||||||  |||||||||||||| |||||||||||||| | |||| |||||||||||| |||||  |||||||     
T  21812317 tgttgacccagttcagccaatgtggcctaatctgggggagagagcagctttccaatccaatatgtg-aagtcttacaaaaggttccaaga--ctctagct 21812221  T
Q  98 tatc-aagctttacacaag-acagaccctagattctaccctttggtgtttccccactctcacaagatgaaccc 168  Q
    | || |||||||||||| | ||| |||||||| ||||||||||||| ||| ||||||||||||  ||||||||    
T  21812220 tgtcaaagctttacacatgaacaaaccctaga-tctaccctttggtattttcccactctcacactatgaaccc 21812149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 29159808 - 29159890
Alignment:
Q  1 tgttgacccagttcag-ccaatatggcctaatct--gggagagagcagctctccaatccaatatga-gaaagtgttacaaaag 79  Q
    |||||||||||||| | |||||||| ||||||||  |||||||||||||||||||||||| ||||| ||||||||||||||||    
T  29159808 tgttgacccagttcggtccaatatgacctaatctaggggagagagcagctctccaatccactatgatgaaagtgttacaaaag 29159890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 21983289 - 21983370
Alignment:
Q  1 tgttgacccagttcag-ccaatatggcctaatctggg--agagagcagctctccaatccaatatga-gaaagtgttacaaaa 78  Q
    |||||||||||||| | |||||||| |||||||||||  ||||||||||||||||||||| ||||| |||||||||||||||    
T  21983289 tgttgacccagttcggtccaatatgacctaatctgggggagagagcagctctccaatccactatgatgaaagtgttacaaaa 21983370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 3 - 79
Target Start/End: Original strand, 55955 - 56034
Alignment:
Q  3 ttgacccagttcag-ccaatatggcctaatctggg-agagagcagctctccaatccaatatga-gaaagtgttacaaaag 79  Q
    |||||||||||| | |||||||| ||||||||||| |||||||||| |||||||||| ||||| ||||||||||||||||    
T  55955 ttgacccagttcggtccaatatgacctaatctggggagagagcagccctccaatccactatgatgaaagtgttacaaaag 56034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 46516402 - 46516320
Alignment:
Q  1 tgttgacccagttcag-ccaatatggcctaatct--gggagagagcagctctccaatccaatatga-gaaagtgttacaaaag 79  Q
    |||||||||||||| | |||||||| ||||||||  ||||||||||||| |||||||||| ||||| ||||||||||||||||    
T  46516402 tgttgacccagttcggtccaatatgacctaatctaggggagagagcagccctccaatccactatgatgaaagtgttacaaaag 46516320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 49091666 - 49091748
Alignment:
Q  1 tgttgacccagttcag-ccaatatggcctaatctggg--agagagcagctctccaatccaatatga-gaaagtgttacaaaag 79  Q
    ||||||||||||| || |||||||| |||||||||||  |||||||| |||||||||||| ||||| ||||||||||||||||    
T  49091666 tgttgacccagtttagtccaatatgacctaatctggggaagagagcaactctccaatccactatgatgaaagtgttacaaaag 49091748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 47263683 - 47263757
Alignment:
Q  1 tgttgacccagttcag-ccaatatggcctaatctgggagagagcagctctccaatccaatatga-gaaagtgtta 73  Q
    |||||||||||||| | |||||||| |||||| |||| |||||||||||||||||||| ||||| ||||||||||    
T  47263683 tgttgacccagttcggtccaatatgacctaatatgggggagagcagctctccaatccactatgatgaaagtgtta 47263757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 220 - 288
Target Start/End: Original strand, 20284312 - 20284378
Alignment:
Q  220 ctcactacccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaaccc 288  Q
    |||||||||||||||| |||||||||||  ||||||||||||||  ||| | |||||||||||||||||    
T  20284312 ctcactacccaaggtgtttacaatgttt--cccaacccaagagaacctcactacaaagacactcaaccc 20284378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 220 - 288
Target Start/End: Complemental strand, 23402887 - 23402821
Alignment:
Q  220 ctcactacccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaaccc 288  Q
    |||||||||||||||| |||||||||||  ||||||||||||||  ||| | |||||||||||||||||    
T  23402887 ctcactacccaaggtgtttacaatgttt--cccaacccaagagaacctcactacaaagacactcaaccc 23402821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 220 - 287
Target Start/End: Complemental strand, 4796542 - 4796477
Alignment:
Q  220 ctcactacccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacc 287  Q
    |||||||||||||||| ||||||||||||  |||||||||||||  ||| | ||||||||||||||||    
T  4796542 ctcactacccaaggtgtttacaatgtttt--ccaacccaagagatcctcactacaaagacactcaacc 4796477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 21988913 - 21988992
Alignment:
Q  1 tgttgacccagttcag-ccaatatggcctaatctgggagagagcagctctccaatccaatatga-gaaagtgttacaaaa 78  Q
    |||||||||||||| | |||||||| ||||||||||  ||||||| |||||||||||| | ||| |||||||||||||||    
T  21988913 tgttgacccagttcggtccaatatgacctaatctggaggagagcaactctccaatccactttgatgaaagtgttacaaaa 21988992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 220 - 305
Target Start/End: Original strand, 2479559 - 2479642
Alignment:
Q  220 ctcactacccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacccattggttccctcctttg 305  Q
    |||||||||||||||| ||||||||  |||||||||||||||||  ||| | | |||||||||||||||    |||||||||||||    
T  2479559 ctcactacccaaggtgtttacaatg--tttcccaacccaagagatcctcactataaagacactcaaccctaaagttccctcctttg 2479642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 220 - 285
Target Start/End: Original strand, 21989131 - 21989194
Alignment:
Q  220 ctcactacccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaa 285  Q
    |||||||||||||||| ||||||||  |||||||||||||||||  ||| | ||||||||||||||    
T  21989131 ctcactacccaaggtgtttacaatg--tttcccaacccaagagatcctcactacaaagacactcaa 21989194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 220 - 288
Target Start/End: Original strand, 2580613 - 2580678
Alignment:
Q  220 ctcactacccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaaccc 288  Q
    |||||||||||||||| ||||||||||||  |||||||||||||  ||| | |||||||||||||||||    
T  2580613 ctcactacccaaggtgtttacaatgtttt--ccaacccaagagaacctcac-acaaagacactcaaccc 2580678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 220 - 288
Target Start/End: Complemental strand, 2647571 - 2647505
Alignment:
Q  220 ctcactacccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaaccc 288  Q
    |||||||||||||||| |||| ||||||  ||||||||||||||  ||| | |||||||||||||||||    
T  2647571 ctcactacccaaggtgcttaccatgttt--cccaacccaagagatcctcactacaaagacactcaaccc 2647505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 220 - 288
Target Start/End: Complemental strand, 44847999 - 44847933
Alignment:
Q  220 ctcactacccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaaccc 288  Q
    ||||||| |||||||| |||||||||||  ||||||||||||||  ||| | |||||||||||||||||    
T  44847999 ctcactatccaaggtgtttacaatgttt--cccaacccaagagatcctcactacaaagacactcaaccc 44847933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 44848776 - 44848696
Alignment:
Q  1 tgttgacccagttcagc-caatatggcctaatctggg--agagagcagctctccaatccaatatga-gaaagtgttacaaa 77  Q
    |||||||||||||| |  ||||||| ||||| |||||  ||||||||||||||||||||| ||||| ||||||||||||||    
T  44848776 tgttgacccagttcggttcaatatgacctaacctgggggagagagcagctctccaatccactatgatgaaagtgttacaaa 44848696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 220 - 288
Target Start/End: Complemental strand, 46516179 - 46516113
Alignment:
Q  220 ctcactacccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaaccc 288  Q
    |||||||||||||||| ||||||||  ||||||||| |||||||  ||| | |||||||||||||||||    
T  46516179 ctcactacccaaggtgtttacaatg--tttcccaactcaagagatcctcactacaaagacactcaaccc 46516113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 9190100 - 9190021
Alignment:
Q  1 tgttgacccagttcag-ccaatatggcctaatctggg--agagagcagctctccaatccaatatga-gaaagtgttacaa 76  Q
    |||||||||||||| | |||||||| |||| ||||||  ||||||||||||||||||||| || || |||||||||||||    
T  9190100 tgttgacccagttcggtccaatatgacctagtctgggggagagagcagctctccaatccactaagatgaaagtgttacaa 9190021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 20284094 - 20284173
Alignment:
Q  1 tgttgacccagttcag-ccaatatggcctaatctggg--agagagcagctctccaatccaatatga-gaaagtgttacaa 76  Q
    |||||||||||||| | |||||||| |||||||||||  |||||||||| |||||||||| || || |||||||||||||    
T  20284094 tgttgacccagttcggtccaatatgacctaatctgggggagagagcagccctccaatccactaagatgaaagtgttacaa 20284173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 2479342 - 2479421
Alignment:
Q  1 tgttgacccagttcagc-caatatggcctaatct-gggagagagcagctctccaatccaatatga-gaaagtgttacaaa 77  Q
    |||||||||||||| |  ||||||| |||||||| ||| ||||||||||||| |||||| ||||| ||||||||||||||    
T  2479342 tgttgacccagttcggttcaatatgacctaatctagggggagagcagctctcaaatccactatgatgaaagtgttacaaa 2479421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 2647788 - 2647706
Alignment:
Q  1 tgttgacccagttcagcc-aatatggcctaatctggg--agagagcagctctccaatccaatatga-gaaagtgttacaaaag 79  Q
    |||||||||| ||| ||| |||||| |||| ||||||  |||||||||| |||||||||| ||||| ||||||||||||||||    
T  2647788 tgttgacccaattcggcccaatatgacctattctgggggagagagcagccctccaatccactatgatgaaagtgttacaaaag 2647706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 227 - 277
Target Start/End: Complemental strand, 21812143 - 21812092
Alignment:
Q  227 cccaaggtgattacaatgttttt-cccaacccaagagacactctcaacaaag 277  Q
    ||||||||||||||||||||||| ||||||| |||| ||||||||| |||||    
T  21812143 cccaaggtgattacaatgtttttccccaacctaagaaacactctcatcaaag 21812092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 33332542 - 33332460
Alignment:
Q  1 tgttgacccagttc-agccaatatggcctaatctggg--agagagcagctctccaatccaatatga-gaaagtgttacaaaag 79  Q
    |||||||||||||| | | |||||| |||||||||||  |||||||||| |||||||||| || || ||||||||||||||||    
T  33332542 tgttgacccagttcgatctaatatgacctaatctgggggagagagcagccctccaatccactaagatgaaagtgttacaaaag 33332460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 220 - 288
Target Start/End: Original strand, 3047477 - 3047543
Alignment:
Q  220 ctcactacccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaaccc 288  Q
    ||||||||||||| |||||| | |||||  ||||||||||||||  ||| | |||||||||||||||||    
T  3047477 ctcactacccaagatgattatagtgttt--cccaacccaagagaacctcactacaaagacactcaaccc 3047543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 220 - 288
Target Start/End: Complemental strand, 9185048 - 9184982
Alignment:
Q  220 ctcactacccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaaccc 288  Q
    |||||||||||||||| ||||||||  |||||||||||||||||  ||  | ||||||| |||||||||    
T  9185048 ctcactacccaaggtgtttacaatg--tttcccaacccaagagaaccttactacaaagatactcaaccc 9184982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 227 - 277
Target Start/End: Complemental strand, 24266106 - 24266054
Alignment:
Q  227 cccaaggtgattacaatgtt--tttcccaacccaagagacactctcaacaaag 277  Q
    ||||||||||||||||||||  |||||||||| |||| ||||||||| |||||    
T  24266106 cccaaggtgattacaatgttgttttcccaacctaagatacactctcatcaaag 24266054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 220 - 288
Target Start/End: Original strand, 47263889 - 47263955
Alignment:
Q  220 ctcactacccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaaccc 288  Q
    |||||||||||||||  |||||||||||  ||||||| ||||||  ||| | |||||||||||||||||    
T  47263889 ctcactacccaaggtatttacaatgttt--cccaaccgaagagattctcactacaaagacactcaaccc 47263955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 2580395 - 2580474
Alignment:
Q  1 tgttgacccagttcag-ccaatatggcctaatctggg--agagagcagctctccaatccaatatga-gaaagtgttacaa 76  Q
    |||||||||| ||| | |||||||| |||| ||||||  ||||||||||||||||||||| || || |||||||||||||    
T  2580395 tgttgacccaattcggtccaatatgacctagtctgggggagagagcagctctccaatccactaagatgaaagtgttacaa 2580474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 220 - 263
Target Start/End: Complemental strand, 9189881 - 9189840
Alignment:
Q  220 ctcactacccaaggtgattacaatgtttttcccaacccaagaga 263  Q
    |||||||||||||||| ||||||||  |||||||||||||||||    
T  9189881 ctcactacccaaggtgtttacaatg--tttcccaacccaagaga 9189840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 214; Significance: 1e-117; HSPs: 47)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 214; E-Value: 1e-117
Query Start/End: Original strand, 1 - 305
Target Start/End: Complemental strand, 11099018 - 11098711
Alignment:
Q  1 tgttgacccagttcagccaatatggcctaatctggg--agagagcagctctccaatccaatatga-gaaagtgttacaaaaggttgcaagaagctctagc 97  Q
    ||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||| |||||||||||||| |||| |||||| |  ||||    
T  11099018 tgttgacccagttcagccaatatggcctaatctgggggagagagcagctctccaatccaatatgatgaaagtgttacaaagggttacaagaaacaatagc 11098919  T
Q  98 tatcaagctttacacaaga-cagaccctagattctaccctttggtgtttccccactctcacaagatgaaccctaaaagagaagtcactagaggaagcttt 196  Q
    |  ||||||| |||||||| || |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||    
T  11098918 ttgcaagctt-acacaagaacaaaccctagattctaccctttggtgtttccccactctcacaatatgaaccctaaaagagaagacactagaggaagcttt 11098820  T
Q  197 aaatccttccaaccaatgaactcctcactacccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacccattggttc 296  Q
    | ||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||    
T  11098819 agatccttccaactaatgtactcctcactacccaaggtgattacaatgtttttcccaacccaagagacactctctacaaagacactcaaccctttggttc 11098720  T
Q  297 cctcctttg 305  Q
    |||||||||    
T  11098719 cctcctttg 11098711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 1 - 305
Target Start/End: Original strand, 14291494 - 14291801
Alignment:
Q  1 tgttgacccagttcagccaatatggcctaatctggg--agagagcagctctccaatccaatatga-gaaagtgttacaaaaggttgcaagaagctctagc 97  Q
    ||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||| |||||||||||||| |||| |||||| |  ||||    
T  14291494 tgttgacccagttcagccaatatggcctaatctgggggagagagcagctctccaatccaatatgatgaaagtgttacaaagggttacaagaaacaatagc 14291593  T
Q  98 tatcaagctttacacaaga-cagaccctagattctaccctttggtgtttccccactctcacaagatgaaccctaaaagagaagtcactagaggaagcttt 196  Q
      |||||||| |||||||| ||  ||||||||||||||| |  |||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||    
T  14291594 cttcaagctt-acacaagaacaagccctagattctacccatatgtgtttccccactctcacaatatgaaccctaaaagagaagacactagaggaagcttt 14291692  T
Q  197 aaatccttccaaccaatgaactcctcactacccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacccattggttc 296  Q
    | ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||| |||||||| |||||||    
T  14291693 agatccttccaactaatgaactcctcactacccaaggtgattacaatgtttttcccaacccaagagacactatctacaaagacgctcaaccctttggttc 14291792  T
Q  297 cctcctttg 305  Q
    |||||||||    
T  14291793 cctcctttg 14291801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 170; E-Value: 3e-91
Query Start/End: Original strand, 1 - 305
Target Start/End: Complemental strand, 9296492 - 9296186
Alignment:
Q  1 tgttgacccagttcagccaatatggcctaatctggg--agagagcagctctccaatccaatatga-gaaagtgttacaaaaggttgcaagaagctctagc 97  Q
    ||||||||||||||||||||||||||||||| ||||  ||||||||||||||||||||||||||| |||||||||||||| |||| |||||| |  ||||    
T  9296492 tgttgacccagttcagccaatatggcctaatttgggggagagagcagctctccaatccaatatgatgaaagtgttacaaagggttacaagaaacaatagc 9296393  T
Q  98 tatcaagctttacacaaga-cagaccctagattctaccctttggtgtttccccactctcacaagatgaaccctaaaagagaagtcactagaggaagcttt 196  Q
      |||||||| | |||||| ||  ||||||||||||||| |  |||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||    
T  9296392 cttcaagctt-atacaagaacaagccctagattctacccatatgtgtttccccactctcacaatatgaaccctaaaagagaagacactagaggaagcttt 9296294  T
Q  197 aaatccttccaaccaatgaactcctcactacccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacccattggttc 296  Q
    | ||||||||||    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||| || ||||||||||||||||| |||||||    
T  9296293 agatccttccaatgg-tgaactcctcactacccaaggtgattacaatgtttttcccaacccaatagacactttctacaaagacactcaaccctttggttc 9296195  T
Q  297 cctcctttg 305  Q
    |||||||||    
T  9296194 cctcctttg 9296186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 1 - 288
Target Start/End: Original strand, 3491756 - 3492043
Alignment:
Q  1 tgttgacccagttcagccaatatggcctaatct--gggagagagcagctctccaatccaatatga-gaaagtgttacaaaaggttgcaagaagctctagc 97  Q
    |||||||||||||||||||||||||||||||||  |||||||||||||||||||||||| ||||| |||||||||||||| |||| ||||||    ||||    
T  3491756 tgttgacccagttcagccaatatggcctaatctgggggagagagcagctctccaatccactatgatgaaagtgttacaaagggttacaagaa-aaatagc 3491854  T
Q  98 tatcaagctttacacaag-acagaccctagattctaccctttggtgtttccccactctcacaagatgaaccctaaaagagaagtcactagaggaagcttt 196  Q
    |  ||||| ||||||||| |||   |||||||||||||| || |||||||||||||||||||| ||||||||||||||||||| ||| |||||||||||     
T  3491855 ttgcaagc-ttacacaagaacaagacctagattctacccatttgtgtttccccactctcacaatatgaaccctaaaagagaagacacaagaggaagctta 3491953  T
Q  197 aaatccttccaaccaatgaactcctcactacccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaaccc 288  Q
    | ||||||||||     |||   |||||||||||||||| ||||||||||||| |||||||||||||  ||| | |||||||||||||||||    
T  3491954 agatccttccaatggtggaa--tctcactacccaaggtgtttacaatgttttttccaacccaagagatcctcactacaaagacactcaaccc 3492043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 1 - 173
Target Start/End: Complemental strand, 39812067 - 39811894
Alignment:
Q  1 tgttgacccagttcagccaatatggcctaatctggg--agagagcagctctccaatccaatatgagaaagtgttacaaaaggttgcaagaagctctagct 98  Q
    |||||| |||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||| |||||  |||||||     
T  39812067 tgttgaaccagttcagccaatatggcctaatctgggggagagagcagctctccaatccaatatgagaaagtgttacaaaaggttacaaga--ctctagcc 39811970  T
Q  99 atcaagctttacacaag-acagaccctagattctaccctttggtgtttccccactctcacaagatgaaccctaaaa 173  Q
     |||||||||||||| | ||| |||||||||||||||||||||| ||| ||||||||||||  |||||||||||||    
T  39811969 ttcaagctttacacatgaacaaaccctagattctaccctttggtattttcccactctcacactatgaaccctaaaa 39811894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 1 - 172
Target Start/End: Original strand, 32246794 - 32246966
Alignment:
Q  1 tgttgacccagttcagccaatatggcctaatctggg--agagagcagctctccaatccaatatgagaaagtgttacaaaaggttgcaagaagctctagct 98  Q
    ||||||||  ||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||| |||||  ||||||||    
T  32246794 tgttgaccttgttcagccaatatggcctaatctgggggagagagcagctctccaatccaatatgagaaagtgttacaaaaggttacaaga--ctctagct 32246891  T
Q  99 atcaagctttacacaag-acagaccctagattctaccctttggtgtttccccactctcacaagatgaaccctaaa 172  Q
     |||||||||||||| | ||| |||||||||| ||||||||||| ||| ||||||||||||  ||||||||||||    
T  32246892 ttcaagctttacacatgaacaaaccctagattataccctttggtattttcccactctcacactatgaaccctaaa 32246966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 1 - 139
Target Start/End: Complemental strand, 44312703 - 44312563
Alignment:
Q  1 tgttgacccagttcagccaatatggcctaatctggg--agagagcagctctccaatccaatatgagaaagtgttacaaaaggttgcaagaagctctagct 98  Q
    ||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||     
T  44312703 tgttgacccagttcagccaatatggcctaatctgggggagagagcagctctccaatccaatatgagaaagtgttacaaaaggttacaagaa-ctctagcc 44312605  T
Q  99 atcaagctttacacaag-acagaccctagattctaccctttg 139  Q
     |||||||||||||| | ||| ||||||||||||||||||||    
T  44312604 ttcaagctttacacatgaacaaaccctagattctaccctttg 44312563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 1 - 209
Target Start/End: Original strand, 25398501 - 25398711
Alignment:
Q  1 tgttgacccagttcagccaatatggcctaatct--gggagagagcagctctccaatccaatatga-gaaagtgttacaaaaggttgcaagaagctctagc 97  Q
    |||||||||||||||||||||||| ||||||||  |||||||||||||||||||||||| ||||| |||||||||||||| |||| ||||||    ||||    
T  25398501 tgttgacccagttcagccaatatgacctaatctgggggagagagcagctctccaatccactatgatgaaagtgttacaaagggttacaagaa-aaatagc 25398599  T
Q  98 tatcaagctttacacaag-acagaccctagattctaccctttggtgtttccccactctcacaagatgaaccctaaaagagaagtcactagaggaagcttt 196  Q
    |  ||||| ||||||||| |||   ||||| |||||||| || ||||||| |||||||||||| ||||||||||||||||||| ||| ||||||||||||    
T  25398600 ttgcaagc-ttacacaagaacaagtcctagtttctacccatttgtgtttctccactctcacaatatgaaccctaaaagagaagacacaagaggaagcttt 25398698  T
Q  197 aaatccttccaac 209  Q
    | |||||||||||    
T  25398699 agatccttccaac 25398711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 1 - 209
Target Start/End: Original strand, 25403639 - 25403849
Alignment:
Q  1 tgttgacccagttcagccaatatggcctaatctggg--agagagcagctctccaatccaatatga-gaaagtgttacaaaaggttgcaagaagctctagc 97  Q
    ||||||| |||||||||||||||| |||||||||||  ||||||||||||||||||||| ||||| |||||||||||||| |||| ||||||    ||||    
T  25403639 tgttgactcagttcagccaatatgacctaatctgggggagagagcagctctccaatccactatgatgaaagtgttacaaagggttacaagaaaaa-tagc 25403737  T
Q  98 tatcaagctttacacaaga-cagaccctagattctaccctttggtgtttccccactctcacaagatgaaccctaaaagagaagtcactagaggaagcttt 196  Q
    |  ||||||| |||||||| ||   ||||| |||||||| || ||||||| |||||||||||| ||||||||||||||||||| ||| ||||||||||||    
T  25403738 ttgcaagctt-acacaagaacaagtcctagtttctacccatttgtgtttctccactctcacaatatgaaccctaaaagagaagacacaagaggaagcttt 25403836  T
Q  197 aaatccttccaac 209  Q
    | |||||||||||    
T  25403837 agatccttccaac 25403849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 34 - 209
Target Start/End: Original strand, 25407663 - 25407838
Alignment:
Q  34 gggagagagcagctctccaatccaatatga-gaaagtgttacaaaaggttgcaagaagctctagctatcaagctttacacaaga-cagaccctagattct 131  Q
    |||||||||||||||||||||||| ||||| |||||||||||||| |||| ||||||    |||||  ||||||| |||||||| ||   ||||| ||||    
T  25407663 gggagagagcagctctccaatccactatgatgaaagtgttacaaagggttacaagaaaaa-tagcttgcaagctt-acacaagaacaagtcctagtttct 25407760  T
Q  132 accctttggtgtttccccactctcacaagatgaaccctaaaagagaagtcactagaggaagctttaaatccttccaac 209  Q
    |||| || ||||||| |||||||||||| ||||||||||||||||||| ||| ||||||||||||| |||||||||||    
T  25407761 acccatttgtgtttctccactctcacaatatgaaccctaaaagagaagacacaagaggaagctttagatccttccaac 25407838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 1 - 168
Target Start/End: Original strand, 19344427 - 19344596
Alignment:
Q  1 tgttgacccagttcagccaatatggcctaatct--gggagagagcagctctccaatccaatatgagaaagtgttacaaaag-gttgcaagaagctctagc 97  Q
    ||||||||||||||||||||| |||||||||||  ||||||||||||||||||||||||||||| ||| |||||||||||| ||| ||||||  ||||||    
T  19344427 tgttgacccagttcagccaatgtggcctaatctaggggagagagcagctctccaatccaatatgtgaatgtgttacaaaagagttacaagaa--tctagc 19344524  T
Q  98 -tatcaagctttacacaag-acagaccctagattctaccctttggtgtttccccactctcacaagatgaaccc 168  Q
     | |||||||||||||| | ||| ||||||||  |||||||||||| ||| ||||| ||||||  ||||||||    
T  19344525 ttttcaagctttacacatgaacaaaccctaga-cctaccctttggtattttcccaccctcacactatgaaccc 19344596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 1 - 168
Target Start/End: Original strand, 19349285 - 19349454
Alignment:
Q  1 tgttgacccagttcagccaatatggcctaatct--gggagagagcagctctccaatccaatatgagaaagtgttacaaaag-gttgcaagaagctctagc 97  Q
    ||||||||||||||||||||| |||||||||||  ||||||||||||||||||||||||||||| ||| |||||||||||| ||| ||||||  ||||||    
T  19349285 tgttgacccagttcagccaatgtggcctaatctaggggagagagcagctctccaatccaatatgtgaatgtgttacaaaagagttacaagaa--tctagc 19349382  T
Q  98 -tatcaagctttacacaag-acagaccctagattctaccctttggtgtttccccactctcacaagatgaaccc 168  Q
     | |||||||||||||| | ||| ||||||||  |||||||||||| ||| ||||| ||||||  ||||||||    
T  19349383 ttttcaagctttacacatgaacaaaccctaga-cctaccctttggtattttcccaccctcacactatgaaccc 19349454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 226 - 307
Target Start/End: Complemental strand, 39811894 - 39811812
Alignment:
Q  226 acccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaaccca-ttggttccctcctttgct 307  Q
    ||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  39811894 acccaaggtgattacaatgtttttctcaacctaagagacactctcaacaaagacactcaacccatttggttccctcctttgct 39811812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 1 - 305
Target Start/End: Original strand, 40738849 - 40739140
Alignment:
Q  1 tgttgacccagttcagccaatatggcctaatct-gggagagagcagctctccaatccaatatga-gaaagtgttacaaaaggttgcaagaagctctagct 98  Q
    |||||||||||||||||||||||| |||||||| ||| |||||||||||||||||||| ||||| |||||||||||||      | || |     |||||    
T  40738849 tgttgacccagttcagccaatatgacctaatctggggggagagcagctctccaatccactatgatgaaagtgttacaa------gaaaaa-----tagct 40738937  T
Q  99 atcaagctttacacaag-acagaccctagattctaccctttggtgtttccccactctcacaagatgaaccctaaaagagaagtcactagaggaagcttta 197  Q
      ||||| ||||||||| |||   | ||| |||||||| || |||||||||||||||||||| ||||||||||||||||||| ||| | || |||||||     
T  40738938 tgcaagc-ttacacaagaacaagtcttagtttctacccatttgtgtttccccactctcacaatatgaaccctaaaagagaagacacaatagtaagctttt 40739036  T
Q  198 aatccttccaaccaatgaactcctcactacccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacccattggttcc 297  Q
     ||||||||||    |||| | |||| ||||||||||| ||||||||  |||||||||||||||||  ||| | |||||||||||||||||    |||||    
T  40739037 gatccttccaa-tggtgaaat-ctcattacccaaggtgtttacaatg--tttcccaacccaagagatcctcactacaaagacactcaaccctagagttcc 40739132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 220 - 288
Target Start/End: Original strand, 25409854 - 25409922
Alignment:
Q  220 ctcactacccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaaccc 288  Q
    |||||||||||||||| |||||||||||||||||||||||||||  ||||| |||||||||||||||||    
T  25409854 ctcactacccaaggtgtttacaatgtttttcccaacccaagagatcctctctacaaagacactcaaccc 25409922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 21629949 - 21630030
Alignment:
Q  1 tgttgacccagttcag-ccaatatggcctaatctggg-agagagcagctctccaatccaatatga-gaaagtgttacaaaag 79  Q
    |||||||||||||||| |||||||| ||||||||||| ||||||||||||||||||||| ||||| ||||||||||||||||    
T  21629949 tgttgacccagttcagtccaatatgacctaatctggggagagagcagctctccaatccactatgatgaaagtgttacaaaag 21630030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 8040065 - 8040147
Alignment:
Q  1 tgttgacccagttcag-ccaatatggcctaatctggg--agagagcagctctccaatccaatatga-gaaagtgttacaaaag 79  Q
    |||||||||||||||| |||||||| |||||||||||  ||||||||||||||||||||| ||||| ||||||||||||||||    
T  8040065 tgttgacccagttcagtccaatatgacctaatctgggggagagagcagctctccaatccactatgatgaaagtgttacaaaag 8040147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 13569333 - 13569415
Alignment:
Q  1 tgttgacccagttcag-ccaatatggcctaatctggg--agagagcagctctccaatccaatatga-gaaagtgttacaaaag 79  Q
    |||||||||||||| | |||||||| |||||||||||  ||||||||||||||||||||| ||||| ||||||||||||||||    
T  13569333 tgttgacccagttcggtccaatatgacctaatctgggggagagagcagctctccaatccactatgatgaaagtgttacaaaag 13569415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 227 - 290
Target Start/End: Original strand, 32246968 - 32247031
Alignment:
Q  227 cccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacccat 290  Q
    |||||||||||||||||||||||||||||| |||| ||||||||| ||||| ||| || |||||    
T  32246968 cccaaggtgattacaatgtttttcccaacctaagaaacactctcatcaaaggcacacaccccat 32247031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 147 - 288
Target Start/End: Complemental strand, 36757707 - 36757570
Alignment:
Q  147 cccactctcacaa-gatgaaccctaaaagagaagtcactagaggaagctttaaatccttccaaccaatgaactcctcactacccaaggtgattacaatgt 245  Q
    ||||||||| ||| ||||||||||||| |||||| ||| | ||||||||||  ||||||||||    |||| || ||||||||||||||| |||||||||    
T  36757707 cccactctctcaatgatgaaccctaaa-gagaagacacaaaaggaagcttttgatccttccaatgg-tgaaatc-tcactacccaaggtgtttacaatgt 36757611  T
Q  246 ttttcccaacccaagagacactctcaacaaagacactcaaccc 288  Q
    ||  ||||||||||||||  ||| | |||||||||||||||||    
T  36757610 tt--cccaacccaagagatcctcactacaaagacactcaaccc 36757570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 28259269 - 28259189
Alignment:
Q  1 tgttgacccagttcag-ccaatatggcctaatctggg--agagagcagctctccaatccaatatga-gaaagtgttacaaa 77  Q
    |||||||||||||| | |||||||| |||||| ||||  ||||||||||||||||||||| ||||| ||||||||||||||    
T  28259269 tgttgacccagttcggtccaatatgacctaatttgggggagagagcagctctccaatccactatgatgaaagtgttacaaa 28259189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 220 - 288
Target Start/End: Original strand, 39483156 - 39483222
Alignment:
Q  220 ctcactacccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaaccc 288  Q
    |||||||||||||||| ||||||| |||  ||||||||||||||  ||| |||||||||||||||||||    
T  39483156 ctcactacccaaggtgtttacaatattt--cccaacccaagagatcctcacaacaaagacactcaaccc 39483222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 20522225 - 20522308
Alignment:
Q  1 tgttgacccagttcag-ccaatatggcctaatct--gggagagagcagctctccaatccaatatga-gaaagtgttacaaaagg 80  Q
    |||||||||||||| | |||||||| ||||||||  ||||||||||| | |||||||||| ||||| |||||||||||||||||    
T  20522225 tgttgacccagttcggtccaatatgacctaatctgggggagagagcaaccctccaatccactatgatgaaagtgttacaaaagg 20522308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 128 - 289
Target Start/End: Complemental strand, 23078433 - 23078278
Alignment:
Q  128 ttctaccctttggtgtttccc-cactctcacaagatgaaccctaaaagagaagtcactagaggaagctttaaatccttccaaccaatgaactcctcacta 226  Q
    |||||||| || ||||| ||| |||||||| | ||||||||||||  |||||| ||| | ||||||||||  ||||||||||  | |||| || ||||||    
T  23078433 ttctacccatttgtgttacccacactctca-atgatgaaccctaa--gagaagacacaaaaggaagcttttgatccttccaatga-tgaaatc-tcacta 23078339  T
Q  227 cccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaaccca 289  Q
    ||||||||| ||||||||  |||||||||||||||||  |||   ||||||||||||||||||    
T  23078338 cccaaggtgtttacaatg--tttcccaacccaagagattctcatcacaaagacactcaaccca 23078278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 10445536 - 10445454
Alignment:
Q  1 tgttgacccagttcag-ccaatatggcctaatctggg--agagagcagctctccaatccaatatga-gaaagtgttacaaaag 79  Q
    |||||| ||||||| | |||||||| |||||||||||  ||||||||||||||||||||| ||| | ||||||||||||||||    
T  10445536 tgttgatccagttcggtccaatatgacctaatctgggggagagagcagctctccaatccactattatgaaagtgttacaaaag 10445454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 17865208 - 17865290
Alignment:
Q  1 tgttgacccagttcagcc-aatatggcctaatctggg--agagagcagctctccaatccaatatga-gaaagtgttacaaaag 79  Q
    |||||||||||||||| | |||||| |||||||||||  |||||||| | |||||||||| ||||| ||||||||||||||||    
T  17865208 tgttgacccagttcagtcgaatatgacctaatctgggggagagagcaaccctccaatccactatgatgaaagtgttacaaaag 17865290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 220 - 286
Target Start/End: Original strand, 21630168 - 21630232
Alignment:
Q  220 ctcactacccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaac 286  Q
    |||||||||||||||| ||||||||  |||||||||||||||||  ||| | |||||||||||||||    
T  21630168 ctcactacccaaggtgtttacaatg--tttcccaacccaagagatcctcactacaaagacactcaac 21630232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 34388863 - 34388945
Alignment:
Q  1 tgttgacccagttcag-ccaatatggcctaatctggg--agagagcagctctccaatccaatatga-gaaagtgttacaaaag 79  Q
    |||||||||| ||| | |||||||| |||||||||||  |||||| |||||||||||||| ||||| ||||||||||||||||    
T  34388863 tgttgacccaattcggtccaatatgacctaatctgggggagagagtagctctccaatccactatgatgaaagtgttacaaaag 34388945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 34682426 - 34682344
Alignment:
Q  1 tgttgacccagttcag-ccaatatggcctaatctggg--agagagcagctctccaatccaatatga-gaaagtgttacaaaag 79  Q
    |||||||||||||| | |||||||| | |||||||||  ||||||||||||||||||||| ||| | ||||||||||||||||    
T  34682426 tgttgacccagttcggtccaatatgacataatctgggggagagagcagctctccaatccactataatgaaagtgttacaaaag 34682344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 220 - 288
Target Start/End: Complemental strand, 41586425 - 41586358
Alignment:
Q  220 ctcactacccaaggtgattacaa-tgtttttcccaacccaagagacactctcaacaaagacactcaaccc 288  Q
    |||||||||||||||| |||||| ||||||  |||||||||||||  |||||| ||||||||||||||||    
T  41586425 ctcactacccaaggtgtttacaactgtttt--ccaacccaagagaagctctcaccaaagacactcaaccc 41586358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 220 - 288
Target Start/End: Complemental strand, 14698883 - 14698817
Alignment:
Q  220 ctcactacccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaaccc 288  Q
    |||||||||||||||| ||||||||  ||||||||||| |||||  ||| | |||||||||||||||||    
T  14698883 ctcactacccaaggtgtttacaatg--tttcccaacccgagagatcctcactacaaagacactcaaccc 14698817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 220 - 288
Target Start/End: Original strand, 17865428 - 17865494
Alignment:
Q  220 ctcactacccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaaccc 288  Q
    |||||||||||||||| ||||||||  |||||||||||||||||   || | |||||||||||||||||    
T  17865428 ctcactacccaaggtgtttacaatg--tttcccaacccaagagatcttcactacaaagacactcaaccc 17865494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 220 - 288
Target Start/End: Original strand, 20522445 - 20522511
Alignment:
Q  220 ctcactacccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaaccc 288  Q
    ||||||||||||| || |||||||| ||  |||||||||||||| |||| | |||||||||||||||||    
T  20522445 ctcactacccaagttgtttacaatgctt--cccaacccaagagatactcactacaaagacactcaaccc 20522511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 18 - 79
Target Start/End: Original strand, 31056067 - 31056131
Alignment:
Q  18 caatatggcctaatct--gggagagagcagctctccaatccaatatga-gaaagtgttacaaaag 79  Q
    ||||||| ||||||||  |||||||||||||||||||||||| || || ||||||||||||||||    
T  31056067 caatatgacctaatctaggggagagagcagctctccaatccactaagatgaaagtgttacaaaag 31056131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 220 - 288
Target Start/End: Original strand, 33118358 - 33118424
Alignment:
Q  220 ctcactacccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaaccc 288  Q
    |||||||||||||||| ||||||||  || ||||||||||||||  ||| | |||||||||||||||||    
T  33118358 ctcactacccaaggtgtttacaatg--ttccccaacccaagagatcctcactacaaagacactcaaccc 33118424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 220 - 288
Target Start/End: Complemental strand, 33528498 - 33528432
Alignment:
Q  220 ctcactacccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaaccc 288  Q
    |||||||||||| ||| |||||||||||  ||||||||||||||  ||| | |||||||||||||||||    
T  33528498 ctcactacccaatgtgtttacaatgttt--cccaacccaagagatcctcactacaaagacactcaaccc 33528432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 220 - 288
Target Start/End: Original strand, 34389074 - 34389140
Alignment:
Q  220 ctcactacccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaaccc 288  Q
    |||||||||||||||| ||||||||  |||||||||||||||||  ||| | |||||||||| ||||||    
T  34389074 ctcactacccaaggtgtttacaatg--tttcccaacccaagagatcctcactacaaagacacacaaccc 34389140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 8390242 - 8390160
Alignment:
Q  1 tgttgacccagttcag-ccaatatggcctaatctggg--agagagcagctctccaatccaatatga-gaaagtgttacaaaag 79  Q
    |||||||||||||| | |||| ||| |||||| ||||  ||||||||||||||||||||| ||||| |||||||||| |||||    
T  8390242 tgttgacccagttcggtccaaaatgacctaatttgggggagagagcagctctccaatccactatgatgaaagtgttaaaaaag 8390160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 10707344 - 10707262
Alignment:
Q  1 tgttgacccagttcag-ccaatatggcctaatctgggagagag--cagctctccaatccaatatga-gaaagtgttacaaaag 79  Q
    |||||||||||||| | |||||||| |||||| |||| |||||  || |||||||||||| ||||| ||||||||||||||||    
T  10707344 tgttgacccagttcggtccaatatgacctaatatgggggagagaacaactctccaatccactatgatgaaagtgttacaaaag 10707262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 14699099 - 14699018
Alignment:
Q  1 tgttgacccagttcag-ccaatatggcctaatctggg--agagagcagctctccaatccaatatga-gaaagtgttacaaaag 79  Q
    |||||||||||||| | |||||||| |||||||||||  |||||||||| |||||||||| ||||| ||||| ||||||||||    
T  14699099 tgttgacccagttcggtccaatatgacctaatctgggggagagagcagccctccaatccactatgatgaaag-gttacaaaag 14699018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 33528713 - 33528631
Alignment:
Q  1 tgttgacccagttcag-ccaatatggcctaatctggga--gagagcagctctccaatccaatatga-gaaagtgttacaaaag 79  Q
    |||||||||||||| | |||||||| |||||| |||||  ||||||| | |||||||||| ||||| ||||||||||||||||    
T  33528713 tgttgacccagttcggtccaatatgacctaatatgggaaagagagcaaccctccaatccactatgatgaaagtgttacaaaag 33528631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 220 - 288
Target Start/End: Complemental strand, 10445341 - 10445275
Alignment:
Q  220 ctcactacccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaaccc 288  Q
    |||||||||||||||| ||||||||  ||||||||||| |||||  ||| | ||||||||| |||||||    
T  10445341 ctcactacccaaggtgtttacaatg--tttcccaacccgagagaacctcactacaaagacattcaaccc 10445275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 220 - 288
Target Start/End: Complemental strand, 28259051 - 28258985
Alignment:
Q  220 ctcactacccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaaccc 288  Q
    ||||||||||||| || |||||||||||  ||||||||||||||  ||| | | |||||||||||||||    
T  28259051 ctcactacccaagatgtttacaatgttt--cccaacccaagagatcctcactataaagacactcaaccc 28258985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 17 - 74
Target Start/End: Complemental strand, 42039744 - 42039684
Alignment:
Q  17 ccaatatggcctaatctg--ggagagagcagctctccaatccaatatga-gaaagtgttac 74  Q
    |||||||| |||||||||  |||||||||||||||| |||||| ||||| |||||||||||    
T  42039744 ccaatatgacctaatctgtgggagagagcagctctctaatccactatgatgaaagtgttac 42039684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 220 - 287
Target Start/End: Complemental strand, 2869566 - 2869501
Alignment:
Q  220 ctcactacccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacc 287  Q
    |||||||||||| ||| ||||||||||||  ||||| |||||||  ||| | ||||||||||||||||    
T  2869566 ctcactacccaatgtgtttacaatgtttt--ccaactcaagagaacctcactacaaagacactcaacc 2869501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 226 - 289
Target Start/End: Complemental strand, 29867840 - 29867780
Alignment:
Q  226 acccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaaccca 289  Q
    |||||||||| ||||||||  ||||||||||||||||| ||||| | ||||||| |||||||||    
T  29867840 acccaaggtgtttacaatg--tttcccaacccaagaga-actctaatcaaagaccctcaaccca 29867780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 220 - 288
Target Start/End: Original strand, 31056266 - 31056334
Alignment:
Q  220 ctcactacccaaggtgattacaatgtttttcccaacc--caagagacactctcaacaaagacactcaaccc 288  Q
    |||||||||||||||| ||||||||  ||||||||||  |||||||  ||| | |||||||||||||||||    
T  31056266 ctcactacccaaggtgtttacaatg--tttcccaaccctcaagagaacctcactacaaagacactcaaccc 31056334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 213; Significance: 1e-117; HSPs: 49)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 213; E-Value: 1e-117
Query Start/End: Original strand, 1 - 305
Target Start/End: Complemental strand, 24787455 - 24787148
Alignment:
Q  1 tgttgacccagttcagccaatatggcctaatctgggag--agagcagctctccaatccaatatgagaaagtgttacaaaaggttgcaagaagctctagct 98  Q
    |||||||||||||||||||||||||||||||||||| |  ||||||||||||||||||||||||||||||||||||||| |||| |||||| |  ||||     
T  24787455 tgttgacccagttcagccaatatggcctaatctgggggggagagcagctctccaatccaatatgagaaagtgttacaaagggttacaagaaacaatagcc 24787356  T
Q  99 atcaagctttacacaaga-cagaccctagattctaccctttggtgtttccccactctcacaagatgaaccctaaaagagaagtcactagaggaagcttta 197  Q
     |||||| |||||||||| || | ||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||| |||||||||||||||||    
T  24787355 ttcaagcattacacaagaacaaatcctagattctaccctttggtgtttcccaactctcacaatatgaaccctaaaagagaagacactagaggaagcttta 24787256  T
Q  198 aatccttccaaccaatgaactcctcactacccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacccattggttcc 297  Q
     ||||||||||| ||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  24787255 gatccttccaactaatgaactcctcactgcccaaggtgattataatgtttttcccaacccaagagacactctcaacaaagacactcaaccctttggttcc 24787156  T
Q  298 ctcctttg 305  Q
    ||||||||    
T  24787155 ctcctttg 24787148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 146; E-Value: 6e-77
Query Start/End: Original strand, 1 - 305
Target Start/End: Complemental strand, 24202860 - 24202556
Alignment:
Q  1 tgttgacccagttcagccaatatggcctaatctggg--agagagcagctctccaatccaatatga-gaaagtgttacaaaaggttgcaagaagctctagc 97  Q
    ||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||| ||||| |||||||||||||| |||| ||||||    ||||    
T  24202860 tgttgacccagttcagccaatatggcctaatctgggggagagagcagctctccaatccactatgatgaaagtgttacaaagggttacaagaaaaa-tagc 24202762  T
Q  98 tatcaagctttacacaaga-cagaccctagattctaccctttggtgtttccccactctcacaagatgaaccctaaaagagaagtcactagaggaagcttt 196  Q
    |  ||||||| |||||||| ||   |||||||||||||| || |||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||    
T  24202761 ttgcaagctt-acacaagaacaagacctagattctacccatttgtgtttccccactctcacaatatgaaccctaaaagagaagacactagaggaagcttt 24202663  T
Q  197 aaatccttccaaccaatgaactcctcactacccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacccattggttc 296  Q
    | ||||||||||    |||  | ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    ||||    
T  24202662 agatccttccaa-tggtgagat-ctcactacccaaggtgattacaatgtttttcccaacccaagagacactctctacaaagacactcaaccctaaagttc 24202565  T
Q  297 cctcctttg 305  Q
    |||||||||    
T  24202564 cctcctttg 24202556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 1 - 173
Target Start/End: Original strand, 41390587 - 41390760
Alignment:
Q  1 tgttgacccagttcagccaatatggcctaatctggg--agagagcagctctccaatccaatatgagaaagtgttacaaaaggttgcaagaagctctagct 98  Q
    ||||||||||| ||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||| |||||  |||||||     
T  41390587 tgttgacccagatcagccaatatggcctaatctgggggagagagcagctctccaatccaatatgagaaagtgttacaaaaggttacaaga--ctctagcc 41390684  T
Q  99 atcaagctttacacaag-acagaccctagattctaccctttggtgtttccccactctcacaagatgaaccctaaaa 173  Q
     |||||||||||||| | ||| |||||||||||||||||||||| ||| ||||||||||||  |||||||||||||    
T  41390685 ttcaagctttacacatgaacaaaccctagattctaccctttggtattttcccactctcacactatgaaccctaaaa 41390760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 1 - 173
Target Start/End: Original strand, 41398242 - 41398415
Alignment:
Q  1 tgttgacccagttcagccaatatggcctaatctggg--agagagcagctctccaatccaatatgagaaagtgttacaaaaggttgcaagaagctctagct 98  Q
    ||||||||||| ||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||| |||||  |||||||     
T  41398242 tgttgacccaggtcagccaatatggcctaatctgggggagagagcagctctccaatccaatatgagaaagtgttacaaaaggttacaaga--ctctagcc 41398339  T
Q  99 atcaagctttacacaag-acagaccctagattctaccctttggtgtttccccactctcacaagatgaaccctaaaa 173  Q
     |||||||||||||| | ||| |||||||||||||||||||||| ||| ||||||||||||  |||||||||||||    
T  41398340 ttcaagctttacacatgaacaaaccctagattctaccctttggtattttcccactctcacactatgaaccctaaaa 41398415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 1 - 305
Target Start/End: Complemental strand, 19358934 - 19358631
Alignment:
Q  1 tgttgacccagttcagccaatatggcctaatctggg--agagagcagctctccaatccaatatga-gaaagtgttacaaaaggttgcaagaagctctagc 97  Q
    |||||||||||||||| ||||||| |||||| ||||  ||||||||||||||||||||| ||||| |||||||||||||| |||| ||||||    ||||    
T  19358934 tgttgacccagttcagtcaatatgacctaatatgggggagagagcagctctccaatccactatgatgaaagtgttacaaagggttacaagaaaaa-tagc 19358836  T
Q  98 tatcaagctttacacaaga-cagaccctagattctaccctttggtgtttccccactctcacaagatgaaccctaaaagagaagtcactagaggaagcttt 196  Q
    |  ||||||| |||||||| ||   |||||||||||||| || |||||||||||||||| ||| ||||||||||||||||||| ||| ||||||||||||    
T  19358835 ttgcaagctt-acacaagaacaagacctagattctacccatttgtgtttccccactctctcaatatgaaccctaaaagagaagacacaagaggaagcttt 19358737  T
Q  197 aaatccttccaaccaatgaactcctcactacccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacccattggttc 296  Q
    | ||||||||||    |||| | |||||||||||||||| |||||||| |||||||||||||| |||  ||| | |||||||||||||||||    ||||    
T  19358736 agatccttccaa-tggtgaaat-ctcactacccaaggtgtttacaatg-ttttcccaacccaaaagatcctcactacaaagacactcaaccctagagttc 19358640  T
Q  297 cctcctttg 305  Q
    |||||||||    
T  19358639 cctcctttg 19358631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 1 - 305
Target Start/End: Complemental strand, 19361523 - 19361220
Alignment:
Q  1 tgttgacccagttcagccaatatggcctaatctggg--agagagcagctctccaatccaatatga-gaaagtgttacaaaaggttgcaagaagctctagc 97  Q
    |||||||||||||||| ||||||| |||||| ||||  ||||||||||||||||||||| ||||| |||||||||||||| |||| ||||||    |||     
T  19361523 tgttgacccagttcagtcaatatgacctaatatgggggagagagcagctctccaatccactatgatgaaagtgttacaaagggttacaagaaaaa-tagt 19361425  T
Q  98 tatcaagctttacacaaga-cagaccctagattctaccctttggtgtttccccactctcacaagatgaaccctaaaagagaagtcactagaggaagcttt 196  Q
    |  ||||||| |||||||| ||   |||||||||||||| || |||||||||||||||| ||| ||||||||||||||||||| ||| ||||||||||||    
T  19361424 ttgcaagctt-acacaagaacaagacctagattctacccatttgtgtttccccactctctcaatatgaaccctaaaagagaagacacaagaggaagcttt 19361326  T
Q  197 aaatccttccaaccaatgaactcctcactacccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacccattggttc 296  Q
    | ||||||||||    |||| | |||||||||||||||| |||||||| ||||||||||||||||||  ||| | |||||||||||||||||    ||||    
T  19361325 agatccttccaa-tggtgaaat-ctcactacccaaggtgtttacaatg-ttttcccaacccaagagatcctcactacaaagacactcaaccctagagttc 19361229  T
Q  297 cctcctttg 305  Q
    |||||||||    
T  19361228 cctcctttg 19361220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 1 - 172
Target Start/End: Complemental strand, 25445168 - 25444996
Alignment:
Q  1 tgttgacccagttcagccaatatggcctaatctggg--agagagcagctctccaatccaatatgagaaagtgttacaaaaggttgcaagaagctctagc- 97  Q
    ||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||| |||||  |||||||     
T  25445168 tgttgacccagttcagccaatatggcctaatctgggggagagagcagctctccaatccaatatgagaaagtgttacaaaaggttacaaga--ctctagct 25445071  T
Q  98 tatcaagctttacacaag-acagaccctagattctaccctttggtgtttccccactctcacaagatgaaccctaaa 172  Q
    |||||||||||||||| | ||| ||||||||  |||||||||||| ||| ||||||||||||  ||||||||||||    
T  25445070 tatcaagctttacacatgaacaaaccctaga-gctaccctttggtattttcccactctcacactatgaaccctaaa 25444996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 1 - 248
Target Start/End: Complemental strand, 19380163 - 19379916
Alignment:
Q  1 tgttgacccagttcagccaatatggcctaatctggg--agagagcagctctccaatccaatatga-gaaagtgttacaaaaggttgcaagaagctctagc 97  Q
    |||||||||||||||| ||||||| |||||| ||||  ||||||||||||||||||||| ||||| |||||||||||||| |||| ||||||    |||     
T  19380163 tgttgacccagttcagtcaatatgacctaatatgggggagagagcagctctccaatccactatgatgaaagtgttacaaagggttacaagaaaaa-tagt 19380065  T
Q  98 tatcaagctttacacaaga-cagaccctagattctaccctttggtgtttccccactctcacaagatgaaccctaaaagagaagtcactagaggaagcttt 196  Q
    |  ||||||| |||||||| ||   |||||||||||||| || |||||||||||||||| ||| ||||||||||||||||||| ||| ||||||||||||    
T  19380064 ttgcaagctt-acacaagaacaagacctagattctacccatttgtgtttccccactctctcaatatgaaccctaaaagagaagacacaagaggaagcttt 19379966  T
Q  197 aaatccttccaaccaatgaactcctcactacccaaggtgattacaatgtttt 248  Q
    | ||||||||||    |||| | |||||||||||||||| ||||||||||||    
T  19379965 agatccttccaa-tggtgaaat-ctcactacccaaggtgtttacaatgtttt 19379916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 122 - 305
Target Start/End: Complemental strand, 19366276 - 19366095
Alignment:
Q  122 cctagattctaccctttggtgtttccccactctcacaagatgaaccctaaaagagaagtcactagaggaagctttaaatccttccaaccaatgaactcct 221  Q
    |||||||||||||| || |||||||||||||||| ||| ||||||||||||||||||| ||| ||||||||||||| ||||||||||    |||| | ||    
T  19366276 cctagattctacccatttgtgtttccccactctctcaatatgaaccctaaaagagaagacacaagaggaagctttagatccttccaa-tggtgaaat-ct 19366179  T
Q  222 cactacccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacccattggttccctcctttg 305  Q
    |||||||||||||| ||||||| |||||||||||||||||||  ||| | |||||||||||||||||    |||||||||||||    
T  19366178 cactacccaaggtgtttacaatatttttcccaacccaagagatcctcactacaaagacactcaaccctagagttccctcctttg 19366095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 1 - 168
Target Start/End: Original strand, 39445506 - 39445673
Alignment:
Q  1 tgttgacccagttcagccaatatggcctaatct--gggagagagcagctctccaatccaatatgagaaagtgttacaaaaggttgcaagaagctctagc- 97  Q
    |||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||| | ||||||||||||||||| |||||  |||||||     
T  39445506 tgttgacccagttcagccaatatggcctaatctgggggagagagcagctctccaatccaatatgtg-aagtgttacaaaaggttacaaga--ctctagct 39445602  T
Q  98 tatcaagctttacacaag-acagaccctagattctaccctttggtgtttccccactctcacaagatgaaccc 168  Q
    |||||||||||||||| | ||| ||||||||  |||||||||||| ||| ||||||||||||  ||||||||    
T  39445603 tatcaagctttacacatgaacaaaccctaga-actaccctttggtattttcccactctcacactatgaaccc 39445673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 168
Target Start/End: Complemental strand, 1055090 - 1054923
Alignment:
Q  1 tgttgacccagttcagccaatatggcctaatct--gggagagagcagctctccaatccaatatgagaaagtgttacaaaaggttgcaagaagctctagc- 97  Q
    |||||||||||||||||||||||||||||||||  ||||||||||| ||||||||||||||||| | ||||||||||||||||| |||||  |||||||     
T  1055090 tgttgacccagttcagccaatatggcctaatctgggggagagagcaactctccaatccaatatgtg-aagtgttacaaaaggttacaaga--ctctagct 1054994  T
Q  98 tatcaagctttacacaag-acagaccctagattctaccctttggtgtttccccactctcacaagatgaaccc 168  Q
    |||||||||||||||| | ||| ||||||||  |||||||||||| ||| ||||||||||||  ||||||||    
T  1054993 tatcaagctttacacatgaacaaaccctaga-actaccctttggtattttcccactctcacactatgaaccc 1054923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 168
Target Start/End: Complemental strand, 44023952 - 44023785
Alignment:
Q  1 tgttgacccagttcagccaatatggcctaatct--gggagagagcagctctccaatccaatatgagaaagtgttacaaaaggttgcaagaagctctagc- 97  Q
    |||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||| | ||||||||||||||||| |||||  |||||||     
T  44023952 tgttgacccagttcagccaatatggcctaatctgggggagagagcagctctccaatccaatatgtg-aagtgttacaaaaggttacaaga--ctctagct 44023856  T
Q  98 tatcaagctttacacaag-acagaccctagattctaccctttggtgtttccccactctcacaagatgaaccc 168  Q
    | |||||||||||||| | ||| ||||||||  |||||||||||| ||| ||||||||||||  ||||||||    
T  44023855 tgtcaagctttacacatgaacaaaccctaga-actaccctttggtattttcccactctcacactatgaaccc 44023785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 226 - 307
Target Start/End: Original strand, 41398415 - 41398497
Alignment:
Q  226 acccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaaccca-ttggttccctcctttgct 307  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  41398415 acccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacccatttggttccctcctttgct 41398497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 226 - 307
Target Start/End: Original strand, 41390760 - 41390842
Alignment:
Q  226 acccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaaccca-ttggttccctcctttgct 307  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||    
T  41390760 acccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaatccatttggttccctcctttgct 41390842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 43988543 - 43988424
Alignment:
Q  1 tgttgacccagttcagccaatatggcctaatctggg--agagagcagctctccaatccaatatgagaaagtgttacaaaag-gttgcaagaagctctagc 97  Q
    |||| |||||||||||||||| ||||||||||||||  |||||||||||||||||||||||||| ||| |||||||||||| ||| ||||||  ||||||    
T  43988543 tgtttacccagttcagccaatgtggcctaatctgggggagagagcagctctccaatccaatatgtgaatgtgttacaaaagagttacaagaa--tctagc 43988446  T
Q  98 -tatcaagctttacacaagaca 118  Q
     |||||||||||||||||||||    
T  43988445 ttatcaagctttacacaagaca 43988424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 3 - 287
Target Start/End: Original strand, 3281715 - 3281995
Alignment:
Q  3 ttgacccagttcag-ccaatatggcctaatctggg--agagagcagctctccaatccaatatga-gaaagtgttacaaaaggttgcaagaagctctagct 98  Q
    |||||||||||| | |||||||| |||||||||||  |||||||||||||||||||||  |||| ||||||||||||||  ||| ||||||  |  ||||    
T  3281715 ttgacccagttcggtccaatatgacctaatctgggggagagagcagctctccaatccacgatgatgaaagtgttacaaagagttacaagaaaat--agct 3281812  T
Q  99 atcaagctttacacaaga-cagaccctagattctaccctttggtgtttccccactctcacaa-gatgaaccctaaaagagaagtcactagaggaagcttt 196  Q
      ||||||| |||||||| ||   ||||  |||||||| || ||||||||| |||||| ||| ||||||||||||  |||||| ||| | ||||||||||    
T  3281813 tgcaagctt-acacaagaacaagacctaatttctacccatttgtgtttccc-actctctcaatgatgaaccctaa--gagaagacacaaaaggaagcttt 3281908  T
Q  197 aaatccttccaaccaatgaactcctcactacccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacc 287  Q
      ||||||||||    |||| || ||||||||||||||| |||||||||||  ||||||||||||||  ||| | ||||||||||||||||    
T  3281909 tgatccttccaatgg-tgaaatc-tcactacccaaggtgtttacaatgttt--cccaacccaagagatcctcactacaaagacactcaacc 3281995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 47704028 - 47703946
Alignment:
Q  1 tgttgacccagttcag-ccaatatggcctaatctggg--agagagcagctctccaatccaatatga-gaaagtgttacaaaag 79  Q
    |||||||||||||| | |||||||| |||||||||||  ||||||||||||||||||||| ||||| ||||||||||||||||    
T  47704028 tgttgacccagttcggtccaatatgacctaatctgggggagagagcagctctccaatccactatgatgaaagtgttacaaaag 47703946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 26644989 - 26644909
Alignment:
Q  1 tgttgacccagttcag-ccaatatggcctaatctggg--agagagcagctctccaatccaatatga-gaaagtgttacaaa 77  Q
    |||||||||||||| | |||||||| |||||||||||  ||||||||||||||||||||| ||||| ||||||||||||||    
T  26644989 tgttgacccagttcggtccaatatgacctaatctgggggagagagcagctctccaatccattatgatgaaagtgttacaaa 26644909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 9476266 - 9476348
Alignment:
Q  1 tgttgacccagttcag-ccaatatggcctaatct--gggagagagcagctctccaatccaatatga-gaaagtgttacaaaag 79  Q
    |||||||||||||| | |||||||| ||||||||  |||||||||||||||||||||||| ||||| |||||| |||||||||    
T  9476266 tgttgacccagttcggtccaatatgacctaatctaggggagagagcagctctccaatccactatgatgaaagtattacaaaag 9476348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 19072933 - 19073015
Alignment:
Q  1 tgttgacccagttcag-ccaatatggcctaatctggg--agagagcagctctccaatccaatatga-gaaagtgttacaaaag 79  Q
    |||||||||||||| | |||||||| |||||||||||  ||||||||||||||||||||| || || ||||||||||||||||    
T  19072933 tgttgacccagttcggtccaatatgacctaatctgggggagagagcagctctccaatccactaagatgaaagtgttacaaaag 19073015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 19120823 - 19120905
Alignment:
Q  1 tgttgacccagttcag-ccaatatggcctaatctggg--agagagcagctctccaatccaatatga-gaaagtgttacaaaag 79  Q
    |||||||||||||| | |||||||| |||||||||||  ||||||||||||||||||||| || || ||||||||||||||||    
T  19120823 tgttgacccagttcggtccaatatgacctaatctgggggagagagcagctctccaatccactaagatgaaagtgttacaaaag 19120905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 3 - 79
Target Start/End: Original strand, 29651818 - 29651898
Alignment:
Q  3 ttgacccagttcag-ccaatatggcctaatctggg--agagagcagctctccaatccaatatga-gaaagtgttacaaaag 79  Q
    |||||||||||| | |||||||| |||||||||||  |||||||||| |||||||||| ||||| ||||||||||||||||    
T  29651818 ttgacccagttcggtccaatatgacctaatctgggggagagagcagcactccaatccactatgatgaaagtgttacaaaag 29651898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 220 - 288
Target Start/End: Complemental strand, 47098699 - 47098633
Alignment:
Q  220 ctcactacccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaaccc 288  Q
    |||||||||||||||| |||||||||||  ||||||||||||||  ||| | |||||||||||||||||    
T  47098699 ctcactacccaaggtgtttacaatgttt--cccaacccaagagaacctcgctacaaagacactcaaccc 47098633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 220 - 288
Target Start/End: Complemental strand, 47102713 - 47102647
Alignment:
Q  220 ctcactacccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaaccc 288  Q
    |||||||||||||||| |||||||||||  ||||||||||||||  ||| | |||||||||||||||||    
T  47102713 ctcactacccaaggtgtttacaatgttt--cccaacccaagagaacctcactacaaagacactcaaccc 47102647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 227 - 290
Target Start/End: Complemental strand, 1054917 - 1054854
Alignment:
Q  227 cccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacccat 290  Q
    |||||||||||||||||||||||||||||| |||| || |||||| ||||| ||| || |||||    
T  1054917 cccaaggtgattacaatgtttttcccaacctaagaaactctctcatcaaaggcacacaccccat 1054854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 13598403 - 13598485
Alignment:
Q  1 tgttgacccagttcag-ccaatatggcctaatct--gggagagagcagctctccaatccaatatga-gaaagtgttacaaaag 79  Q
    |||||||||||||| | |||||||| ||||||||  ||||||||||||| || ||||||| ||||| ||||||||||||||||    
T  13598403 tgttgacccagttcggtccaatatgacctaatctgggggagagagcagcccttcaatccactatgatgaaagtgttacaaaag 13598485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 34 - 305
Target Start/End: Complemental strand, 13604679 - 13604413
Alignment:
Q  34 gggagagagcagctctccaatccaatatga-gaaagtgttacaaaaggttgcaagaagctctagctatcaagctttacacaag-acagaccctagattct 131  Q
    |||||||||||||||||||||||| ||||| |||| |||||||||  ||| ||||||    |||||  ||| | ||||||||| |||   ||||  ||||    
T  13604679 gggagagagcagctctccaatccactatgatgaaaatgttacaaagagttacaagaa-aaatagcttgcaaac-ttacacaagaacaagacctaatttct 13604582  T
Q  132 accctttggtgtttccccactctcacaa-gatgaaccctaaaagagaagtcactagaggaagctttaaatccttccaaccaatgaactcctcactaccca 230  Q
    |||| || |||||| ||||||||| |||  ||||||||| ||||||||| ||| | ||||||||||  ||||||||||    |||| | |||||||||||    
T  13604581 acccatttgtgttt-cccactctctcaataatgaaccct-aaagagaagacacaaaaggaagcttttgatccttccaa-tggtgaaat-ctcactaccca 13604486  T
Q  231 aggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacccattggttccctcctttg 305  Q
    ||||| ||||||||  |||||||||||||||||  ||| | ||||||| |||||||||    |||||||||||||    
T  13604485 aggtgtttacaatg--tttcccaacccaagagatcctcactacaaagatactcaaccctaaagttccctcctttg 13604413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 16124608 - 16124526
Alignment:
Q  1 tgttgacccagttcag-ccaatatggcctaatctggg--agagagcagctctccaatccaatatga-gaaagtgttacaaaag 79  Q
    ||||||| |||||| | |||||||| |||||||||||  |||||||||| |||||||||| ||||| ||||||||||||||||    
T  16124608 tgttgactcagttcggtccaatatgacctaatctgggggagagagcagccctccaatccactatgatgaaagtgttacaaaag 16124526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 227 - 290
Target Start/End: Complemental strand, 25439801 - 25439738
Alignment:
Q  227 cccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacccat 290  Q
    |||||||||||||||||||||||||||||| |||| || |||||| ||||| ||| || |||||    
T  25439801 cccaaggtgattacaatgtttttcccaacctaagaaactctctcatcaaaggcacacaccccat 25439738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 227 - 290
Target Start/End: Complemental strand, 25444994 - 25444931
Alignment:
Q  227 cccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacccat 290  Q
    |||||||||||||||||||||||||||||| |||| || |||||| ||||| ||| || |||||    
T  25444994 cccaaggtgattacaatgtttttcccaacctaagaaactctctcatcaaaggcacacaccccat 25444931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 27104464 - 27104382
Alignment:
Q  1 tgttgacccagttcag-ccaatatggcctaatctggg--agagagcagctctccaatccaatatga-gaaagtgttacaaaag 79  Q
    ||||||| |||||| | |||||||  |||||||||||  ||||||||||||||||||||| ||||| ||||||||||||||||    
T  27104464 tgttgacacagttcggtccaatataacctaatctgggggagagagcagctctccaatccactatgatgaaagtgttacaaaag 27104382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 227 - 290
Target Start/End: Original strand, 39445679 - 39445742
Alignment:
Q  227 cccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacccat 290  Q
    |||||||||||||||||||||||||||||| |||| || |||||| ||||| ||| || |||||    
T  39445679 cccaaggtgattacaatgtttttcccaacctaagaaactctctcatcaaaggcacacaccccat 39445742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 227 - 290
Target Start/End: Complemental strand, 44023779 - 44023716
Alignment:
Q  227 cccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacccat 290  Q
    |||||||||||||||||||||||||||||| |||| || |||||| ||||| ||| || |||||    
T  44023779 cccaaggtgattacaatgtttttcccaacctaagaaactctctcatcaaaggcacacaccccat 44023716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 220 - 288
Target Start/End: Original strand, 29652036 - 29652102
Alignment:
Q  220 ctcactacccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaaccc 288  Q
    |||||||||||||||| ||||||||  ||||||||||||| |||  ||| | |||||||||||||||||    
T  29652036 ctcactacccaaggtgtttacaatg--tttcccaacccaaaagatcctcactacaaagacactcaaccc 29652102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 37069775 - 37069855
Alignment:
Q  1 tgttgacccagttcag-ccaatatggcctaatct--gggagagagcagctctccaatccaatatga-gaaagtgttacaaa 77  Q
    |||||||||||||| | |||||||| ||||||||  ||||||||||| |||||| ||||| ||||| ||||||||||||||    
T  37069775 tgttgacccagttcggtccaatatgacctaatctgggggagagagcatctctccgatccactatgatgaaagtgttacaaa 37069855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 220 - 287
Target Start/End: Original strand, 13598623 - 13598688
Alignment:
Q  220 ctcactacccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacc 287  Q
    |||||||||||||||| ||||||||  ||| |||||||||||||  ||| | ||||||||||||||||    
T  13598623 ctcactacccaaggtgtttacaatg--tttgccaacccaagagatcctcactacaaagacactcaacc 13598688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 220 - 287
Target Start/End: Complemental strand, 27104275 - 27104211
Alignment:
Q  220 ctcactacccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacc 287  Q
    |||||||||||||||| ||| ||||  |||||||||||||||||| ||| | ||||||||||||||||    
T  27104275 ctcactacccaaggtgcttataatg--tttcccaacccaagagac-ctcactacaaagacactcaacc 27104211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 775677 - 775759
Alignment:
Q  1 tgttgacccagttcag-ccaatatggcctaatctggg--agagagcagctctccaatccaatatga-gaaagtgttacaaaag 79  Q
    |||||||||| ||| | |||||||| |||||||||||  |||||| |||||||||||||| || || ||||||||||||||||    
T  775677 tgttgacccaattcggtccaatatgacctaatctgggggagagagtagctctccaatccactaagatgaaagtgttacaaaag 775759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 98 - 172
Target Start/End: Complemental strand, 25439877 - 25439803
Alignment:
Q  98 tatcaagctttacacaaga-cagaccctagattctaccctttggtgtttccccactctcacaagatgaaccctaaa 172  Q
    |||||||||||||||| || || ||||||||  |||||||||||| ||| ||||||||||||  ||||||||||||    
T  25439877 tatcaagctttacacatgaacaaaccctagag-ctaccctttggtattttcccactctcacactatgaaccctaaa 25439803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 223 - 288
Target Start/End: Complemental strand, 21536441 - 21536378
Alignment:
Q  223 actacccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaaccc 288  Q
    ||||||||||||| ||||||||||||  |||||| ||||||  ||| | |||||||||||||||||    
T  21536441 actacccaaggtgtttacaatgtttt--ccaacctaagagatcctcactacaaagacactcaaccc 21536378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 220 - 288
Target Start/End: Original strand, 32889661 - 32889727
Alignment:
Q  220 ctcactacccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaaccc 288  Q
    |||||||||||||||| ||||||||  ||||||||||||| | |  ||| | |||||||||||||||||    
T  32889661 ctcactacccaaggtgtttacaatg--tttcccaacccaaaaaaacctcactacaaagacactcaaccc 32889727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 227 - 277
Target Start/End: Complemental strand, 43988366 - 43988314
Alignment:
Q  227 cccaaggtgattacaatgtt--tttcccaacccaagagacactctcaacaaag 277  Q
    ||||||||||||||||||||  |||||||||| |||| ||||||||| |||||    
T  43988366 cccaaggtgattacaatgttgttttcccaacctaagaaacactctcatcaaag 43988314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 220 - 263
Target Start/End: Complemental strand, 16124388 - 16124347
Alignment:
Q  220 ctcactacccaaggtgattacaatgtttttcccaacccaagaga 263  Q
    |||||||||||||||| ||||||||  |||||||||||||||||    
T  16124388 ctcactacccaaggtgtttacaatg--tttcccaacccaagaga 16124347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 34 - 77
Target Start/End: Complemental strand, 21536625 - 21536581
Alignment:
Q  34 gggagagagcagctctccaatccaatatga-gaaagtgttacaaa 77  Q
    |||||||||||||||||||||||| ||| | ||||||||||||||    
T  21536625 gggagagagcagctctccaatccactataatgaaagtgttacaaa 21536581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 223 - 282
Target Start/End: Original strand, 22819657 - 22819714
Alignment:
Q  223 actacccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacact 282  Q
    ||||||||||||| ||||||||  |||||||||||||||||  ||| | |||||||||||    
T  22819657 actacccaaggtgtttacaatg--tttcccaacccaagagaacctcactacaaagacact 22819714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 228 - 287
Target Start/End: Original strand, 37069998 - 37070055
Alignment:
Q  228 ccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacc 287  Q
    |||||||| |||||||||||  ||||||||||||||  ||| | ||||||||||||||||    
T  37069998 ccaaggtgtttacaatgttt--cccaacccaagagatcctcactacaaagacactcaacc 37070055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 220 - 288
Target Start/End: Complemental strand, 40816690 - 40816622
Alignment:
Q  220 ctcactacccaaggtgattacaatgtttttcccaacc--caagagacactctcaacaaagacactcaaccc 288  Q
    |||||||||||||||| ||||||||  ||||||||||  |||||||  ||| | |||||||||||||||||    
T  40816690 ctcactacccaaggtgtttacaatg--tttcccaaccctcaagagaacctcactacaaagacactcaaccc 40816622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 47098916 - 47098837
Alignment:
Q  1 tgttgacccagttcag-ccaatatggcctaatctggg--agagagcagctctccaatccaatatga-gaaagtgttacaa 76  Q
    |||||||||||||| | |||||||| || ||||||||  |||||||||| |||||||||| || || |||||||||||||    
T  47098916 tgttgacccagttcggtccaatatgaccgaatctgggggagagagcagccctccaatccactaagatgaaagtgttacaa 47098837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 220 - 288
Target Start/End: Complemental strand, 47703809 - 47703741
Alignment:
Q  220 ctcactacccaaggtgattacaatgtttttcccaacc--caagagacactctcaacaaagacactcaaccc 288  Q
    |||||||||||||||| ||||||||  ||||||||||  |||||||  ||| | |||||||||||||||||    
T  47703809 ctcactacccaaggtgtttacaatg--tttcccaaccctcaagagaacctcactacaaagacactcaaccc 47703741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 192; Significance: 1e-104; HSPs: 44)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 1 - 305
Target Start/End: Complemental strand, 5674861 - 5674554
Alignment:
Q  1 tgttgacccagttcagccaatatggcctaatctggg--agagagcagctctccaatccaatatga-gaaagtgttacaaaaggttgcaagaagctctagc 97  Q
    ||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||| |||||||||||||| |||| |||||| |  ||||    
T  5674861 tgttgacccagttcagccaatatggcctaatctgggggagagagcagctctccaatccaatatgatgaaagtgttacaaagggttacaagaaacaatagc 5674762  T
Q  98 tatcaagctttacacaagacagac--cctagattctaccctttggtgtttccccactctcacaagatgaaccctaaaagagaagtcactagaggaagctt 195  Q
    |  ||||||| |||||||| | |   |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||    
T  5674761 ttgcaagctt-acacaagaaacaagacctagattctaccctttggtgtttccccactctcacaatatgaaccctaaaagagaagacactagaggaagctt 5674663  T
Q  196 taaatccttccaaccaatgaactcctcactacccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacccattggtt 295  Q
    || ||||||||||    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||    
T  5674662 tagatccttccaatgg-tgaactcctcactacccaaggtgattacaatgtttttcccaacccaagagacactctctacaaagacactcaaccctttggtt 5674564  T
Q  296 ccctcctttg 305  Q
    ||||||||||    
T  5674563 ccctcctttg 5674554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 121; E-Value: 5e-62
Query Start/End: Original strand, 1 - 173
Target Start/End: Original strand, 11856980 - 11857154
Alignment:
Q  1 tgttgacccagttcagccaatatggcctaatctggg--agagagcagctctccaatccaatatgagaaagtgttacaaaaggttgcaagaagctctagct 98  Q
    ||||||||||||||||||||||||||||||| ||||  |||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||     
T  11856980 tgttgacccagttcagccaatatggcctaatatgggggagagagcagctctccaatccaatatgagaaagtgttacaaaaggttacaagaa-ctctagcc 11857078  T
Q  99 atcaagctttacacaag-acagaccctagattctaccctttggtgtttccccactctcacaagatgaaccctaaaa 173  Q
     |||||||||||||| | ||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  11857079 ttcaagctttacacatgaacaaaccctagattctaccctttggtgtttccccactctcacaatatgaaccctaaaa 11857154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 1 - 173
Target Start/End: Complemental strand, 22010776 - 22010602
Alignment:
Q  1 tgttgacccagttcagccaatatggcctaatctggg--agagagcagctctccaatccaatatgagaaagtgttacaaaaggttgcaagaagctctagct 98  Q
    ||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||     
T  22010776 tgttgacccagttcagccaatatggcctaatctgggggagagagcagctctccaatccaatatgagaaagtgttacaaaaggttacaagaa-ctctagcc 22010678  T
Q  99 atcaagctttacacaag-acagaccctagattctaccctttggtgtttccccactctcacaagatgaaccctaaaa 173  Q
     |||||||||||||| | ||| |||||||||||||||||||| | ||||||||||||||||| |||||||||||||    
T  22010677 ttcaagctttacacatgaacaaaccctagattctaccctttgatatttccccactctcacaatatgaaccctaaaa 22010602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 1 - 173
Target Start/End: Complemental strand, 14737655 - 14737482
Alignment:
Q  1 tgttgacccagttcagccaatatggcctaatctggg--agagagcagctctccaatccaatatgagaaagtgttacaaaaggttgcaagaagctctagct 98  Q
    |||||| |||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||| |||||  |||||||     
T  14737655 tgttgatccagttcagccaatatggcctaatctgggggagagagcagctctccaatccaatatgagaaagtgttacaaaaggttacaaga--ctctagcc 14737558  T
Q  99 atcaagctttacacaag-acagaccctagattctaccctttggtgtttccccactctcacaagatgaaccctaaaa 173  Q
     |||||||||||| | | ||| |||||||||||||||||||||| ||| ||||||||||||  |||||||||||||    
T  14737557 ttcaagctttacatatgaacaaaccctagattctaccctttggtattttcccactctcacactatgaaccctaaaa 14737482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 1 - 173
Target Start/End: Original strand, 28184511 - 28184684
Alignment:
Q  1 tgttgacccagttcagccaatatggcctaatctggg--agagagcagctctccaatccaatatgagaaagtgttacaaaaggttgcaagaagctctagct 98  Q
    ||||||||||||||||||||||||||||||||||||  ||||||||||||||||||| |||||||||||||||||||||||||| ||| |  |||||||     
T  28184511 tgttgacccagttcagccaatatggcctaatctgggggagagagcagctctccaatctaatatgagaaagtgttacaaaaggttacaaca--ctctagcc 28184608  T
Q  99 atcaagctttacacaag-acagaccctagattctaccctttggtgtttccccactctcacaagatgaaccctaaaa 173  Q
     |||||||||||||| | ||| |||||||||||||||||||||| ||| ||||||||||||  |||||||||||||    
T  28184609 ttcaagctttacacatgaacaaaccctagattctaccctttggtattttcccactctcacactatgaaccctaaaa 28184684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 1 - 173
Target Start/End: Complemental strand, 14742515 - 14742342
Alignment:
Q  1 tgttgacccagttcagccaatatggcctaatctggg--agagagcagctctccaatccaatatgagaaagtgttacaaaaggttgcaagaagctctagct 98  Q
    |||||||||||||||||||||||| |||||| ||||  |||||||||||||||||||||||||||||||||||||||||||||| |||||  |||||||     
T  14742515 tgttgacccagttcagccaatatgacctaatttgggggagagagcagctctccaatccaatatgagaaagtgttacaaaaggttacaaga--ctctagcc 14742418  T
Q  99 atcaagctttacacaag-acagaccctagattctaccctttggtgtttccccactctcacaagatgaaccctaaaa 173  Q
     |||||||||||| | | ||| |||||||||||||||||||||| ||| ||||||||||||  |||||||||||||    
T  14742417 ttcaagctttacatatgaacaaaccctagattctaccctttggtattttcccactctcacactatgaaccctaaaa 14742342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 1 - 172
Target Start/End: Complemental strand, 28155648 - 28155477
Alignment:
Q  1 tgttgacccagttcagccaatatggcctaatctggg--agagagcagctctccaatccaatatgagaaagtgttacaaaaggttgcaagaagctctagct 98  Q
    ||||||||||||||||||||| ||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||| ||||||  | |||||    
T  28155648 tgttgacccagttcagccaatgtggcctaatctgggggagagagcagctctccaatccaatatgagaaagtgttacaaaaggttacaagaa--tttagct 28155551  T
Q  99 atcaagctttacacaag-acagaccctagattctaccctttggtgtttccccactctcacaagatgaaccctaaa 172  Q
     |||||||||||||| | ||| |||||||| ||||||||||||| ||| ||||||||||||  ||||||||||||    
T  28155550 ttcaagctttacacatgaacaaaccctaga-tctaccctttggtattttcccactctcacactatgaaccctaaa 28155477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 226 - 307
Target Start/End: Original strand, 11857154 - 11857235
Alignment:
Q  226 acccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacccattggttccctcctttgct 307  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11857154 acccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacccattggttccctcctttgct 11857235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 226 - 307
Target Start/End: Complemental strand, 22010602 - 22010521
Alignment:
Q  226 acccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacccattggttccctcctttgct 307  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22010602 acccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacccattggttccctcctttgct 22010521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 226 - 305
Target Start/End: Complemental strand, 14737482 - 14737403
Alignment:
Q  226 acccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacccattggttccctcctttg 305  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14737482 acccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacccattggttccctcctttg 14737403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 1 - 172
Target Start/End: Complemental strand, 33330524 - 33330351
Alignment:
Q  1 tgttgacccagttcagccaatatggcctaatctggg--agagagcagctctccaatccaatatgagaaagtgttacaaaag-gttgcaagaagctctagc 97  Q
    ||||||||||||||||||||| ||||||||||||||  |||||||||||||||||||||||||| ||| |||||||||||| ||| ||||||  ||||||    
T  33330524 tgttgacccagttcagccaatgtggcctaatctgggggagagagcagctctccaatccaatatgtgaatgtgttacaaaagagttacaagaa--tctagc 33330427  T
Q  98 -tatcaagctttacacaagac-agaccctagattctaccctttggtgtttccccactctcacaagatgaaccctaaa 172  Q
     |||||||||||||||| ||| | |||||||| ||||||||||||| ||| ||||  ||||||  ||||||||||||    
T  33330426 ttatcaagctttacacatgacaaaaccctaga-tctaccctttggtattttcccatcctcacactatgaaccctaaa 33330351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 1 - 168
Target Start/End: Original strand, 6438507 - 6438674
Alignment:
Q  1 tgttgacccagttcagccaatatggcctaatct--gggagagagcagctctccaatccaatatgagaaagtgttacaaaaggttgcaagaagctctagc- 97  Q
    ||||| |||||||||||||||||||||||||||  ||||||||||||||||||||||||||||| | ||||||||||||||||| |||||  |||||||     
T  6438507 tgttgtcccagttcagccaatatggcctaatctgggggagagagcagctctccaatccaatatgtg-aagtgttacaaaaggttacaaga--ctctagct 6438603  T
Q  98 tatcaagctttacacaag-acagaccctagattctaccctttggtgtttccccactctcacaagatgaaccc 168  Q
    | |||||||||||||| | ||| ||||||||  |||||||||||| ||| ||||||||||||  ||||||||    
T  6438604 tgtcaagctttacacatgaacaaaccctaga-actaccctttggtattttcccactctcacactatgaaccc 6438674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 226 - 305
Target Start/End: Complemental strand, 14742342 - 14742263
Alignment:
Q  226 acccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacccattggttccctcctttg 305  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  14742342 acccaaagtgattacaatgtttttcccaacccaagagacactctcaacaaagacacttaacccattggttccctcctttg 14742263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 1 - 172
Target Start/End: Original strand, 16838750 - 16838923
Alignment:
Q  1 tgttgacccagttcagccaatatggcctaatctggg--agagagcagctctccaatccaatatgagaaagtgttacaaaag-gttgcaagaagctctagc 97  Q
    ||||||||||||||||||||| |||| |||||||||  |||||||||||||||||||||||||| ||| |||||||||||| ||| ||||||  ||||||    
T  16838750 tgttgacccagttcagccaatgtggcttaatctgggggagagagcagctctccaatccaatatgtgaatgtgttacaaaagagttacaagaa--tctagc 16838847  T
Q  98 ta-tcaagctttacacaag-acagaccctagattctaccctttggtgtttccccactctcacaagatgaaccctaaa 172  Q
    || |||||||||||||| | ||| |||||||| ||||||||||||| ||| ||||  ||||||  ||||||||||||    
T  16838848 tattcaagctttacacatgaacaaaccctaga-tctaccctttggtattttcccatcctcacactatgaaccctaaa 16838923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 1 - 172
Target Start/End: Complemental strand, 33336021 - 33335848
Alignment:
Q  1 tgttgacccagttcagccaatatggcctaatctggg--agagagcagctctccaatccaatatgagaaagtgttacaaaag-gttgcaagaagctctagc 97  Q
    ||||||||||||||||||||| || |||||||||||  |||||||||||||||||||||||||| ||| |||||||||||| ||| ||||||  ||||||    
T  33336021 tgttgacccagttcagccaatgtgacctaatctgggggagagagcagctctccaatccaatatgtgaatgtgttacaaaagagttacaagaa--tctagc 33335924  T
Q  98 -tatcaagctttacacaagac-agaccctagattctaccctttggtgtttccccactctcacaagatgaaccctaaa 172  Q
     |||||||||||||||| ||| | |||||||| ||||||||||||| ||| ||||  ||||||  ||||||||||||    
T  33335923 ttatcaagctttacacatgacaaaaccctaga-tctaccctttggtattttcccatcctcacactatgaaccctaaa 33335848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 1 - 168
Target Start/End: Original strand, 6005423 - 6005592
Alignment:
Q  1 tgttgacccagttcagccaatatggcctaatctggg--agagagcagctctccaatccaatatgagaaagtgttacaaaag-gttgcaagaagctctagc 97  Q
    ||||||||||||||||||||| ||||||||||||||  |||||||||||||||||||||||||| ||| |||||||||||| ||| ||||||  ||||||    
T  6005423 tgttgacccagttcagccaatgtggcctaatctgggggagagagcagctctccaatccaatatgtgaatgtgttacaaaagagttacaagaa--tctagc 6005520  T
Q  98 -tatcaagctttacacaag-acagaccctagattctaccctttggtgtttccccactctcacaagatgaaccc 168  Q
     | |||||||||||||| | ||| ||||||||  |||||||||||| ||| ||||| ||||||  ||||||||    
T  6005521 ttttcaagctttacacatgaacaaaccctaga-cctaccctttggtattttcccaccctcacactatgaaccc 6005592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 122 - 305
Target Start/End: Original strand, 22709137 - 22709316
Alignment:
Q  122 cctagattctaccctttggtgtttccccactctcacaagatgaaccctaaaagagaagtcactagaggaagctttaaatccttccaaccaatgaactcct 221  Q
    ||||| |||||||| || |||||||||||||||||||| ||||||||||||||||||| ||| |||||||| |||  ||||||||||    |||| | ||    
T  22709137 cctagtttctacccatttgtgtttccccactctcacaatatgaaccctaaaagagaagacacaagaggaagtttttgatccttccaa-tggtgaaat-ct 22709234  T
Q  222 cactacccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacccattggttccctcctttg 305  Q
    ||||| |||||||| ||||||||  |||||||||||||||||  ||| | |||||||||||||||||    |||||||||||||    
T  22709235 cactatccaaggtgtttacaatg--tttcccaacccaagagatcctcactacaaagacactcaaccctagagttccctcctttg 22709316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 226 - 296
Target Start/End: Original strand, 28184684 - 28184757
Alignment:
Q  226 acccaaggtgattacaatgttttt---cccaacccaagagacactctcaacaaagacactcaacccattggttc 296  Q
    ||||||||||||||| ||||||||   || ||||||||||||||||||||||||||| ||||||||||| ||||    
T  28184684 acccaaggtgattactatgtttttttcccaaacccaagagacactctcaacaaagaccctcaacccatttgttc 28184757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 5757570 - 5757490
Alignment:
Q  1 tgttgacccagttcag-ccaatatggcctaatctggg--agagagcagctctccaatccaatatga-gaaagtgttacaaa 77  Q
    |||||||||||||| | |||||||| |||||||||||  ||||||||||||||||||||| ||||| ||||||||||||||    
T  5757570 tgttgacccagttcggtccaatatgacctaatctgggggagagagcagctctccaatccactatgatgaaagtgttacaaa 5757490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 227 - 290
Target Start/End: Complemental strand, 28155475 - 28155412
Alignment:
Q  227 cccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacccat 290  Q
    |||||||||||||||||||||||||||||| |||| ||||||||| ||||| ||| || |||||    
T  28155475 cccaaggtgattacaatgtttttcccaacctaagaaacactctcatcaaaggcacacaccccat 28155412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 21356041 - 21356118
Alignment:
Q  1 tgttgacccagttcag-ccaatatggcctaatctgg--gagagagcagctctccaatccaatatga-gaaagtgttac 74  Q
    |||||||||||||| | |||||||| ||||||||||  |||||||||||||||||||||| ||||| |||||||||||    
T  21356041 tgttgacccagttcggtccaatatgacctaatctggaggagagagcagctctccaatccactatgatgaaagtgttac 21356118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 31086565 - 31086485
Alignment:
Q  1 tgttgacccagttcag-ccaatatggcctaatct--gggagagagcagctctccaatccaatatga-gaaagtgttacaaa 77  Q
    |||||||||||||||| ||||||||  |||||||  ||||||||||| |||||||||||| ||||| ||||||||||||||    
T  31086565 tgttgacccagttcagtccaatatgatctaatctaggggagagagcaactctccaatccactatgatgaaagtgttacaaa 31086485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 5572333 - 5572251
Alignment:
Q  1 tgttgacccagttcag-ccaatatggcctaatct--gggagagagcagctctccaatccaatatga-gaaagtgttacaaaag 79  Q
    |||||||||| ||| | |||||||| ||||||||  ||||||||||||| |||||||||| ||||| ||||||||||||||||    
T  5572333 tgttgacccaattcggtccaatatgacctaatctaggggagagagcagccctccaatccactatgatgaaagtgttacaaaag 5572251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 227 - 290
Target Start/End: Original strand, 6438680 - 6438743
Alignment:
Q  227 cccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacccat 290  Q
    |||||||||||||||||||||||||||||| |||| || |||||| ||||| ||| || |||||    
T  6438680 cccaaggtgattacaatgtttttcccaacctaagaaactctctcatcaaaggcacacaccccat 6438743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 4629959 - 4630040
Alignment:
Q  1 tgttgacccagttcag-ccaatatggcctaatctggg--agagagcagctctccaatccaatatga-gaaagtgttacaaaa 78  Q
    ||||||| |||||||| |||||||| |||||||| ||  ||||||||||||||||||||| || || |||||||||||||||    
T  4629959 tgttgactcagttcagtccaatatgacctaatctagggaagagagcagctctccaatccactaagatgaaagtgttacaaaa 4630040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 10077257 - 10077176
Alignment:
Q  1 tgttgacccagttcag-ccaatatggcctaatctggg--agagagcagctctccaatccaatatga-gaaagtgttacaaaa 78  Q
    |||||||||| ||| | |||||||| |||||||||||  |||||||||| |||||||||| ||||| |||||||||||||||    
T  10077257 tgttgacccaattcggtccaatatgacctaatctgggggagagagcagccctccaatccactatgatgaaagtgttacaaaa 10077176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 220 - 288
Target Start/End: Complemental strand, 5017370 - 5017304
Alignment:
Q  220 ctcactacccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaaccc 288  Q
    |||| ||||||||||| |||||||||||  ||||||||||||||  ||| | |||||||||||||||||    
T  5017370 ctcattacccaaggtgtttacaatgttt--cccaacccaagagatcctcactacaaagacactcaaccc 5017304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 22963705 - 22963786
Alignment:
Q  1 tgttgacccagttcagc-caatatggcctaatctggg-agagagcagctctccaatccaatatga-gaaagtgttacaaaag 79  Q
    |||||||||||||| |  ||||||| || |||||||| |||||||||| |||||||||| ||||| ||||||||||||||||    
T  22963705 tgttgacccagttcggtgcaatatgaccaaatctggggagagagcagccctccaatccactatgatgaaagtgttacaaaag 22963786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 23824688 - 23824607
Alignment:
Q  1 tgttgacccagttcagc-caatatggcctaatctggg-agagagcagctctccaatccaatatga-gaaagtgttacaaaag 79  Q
    |||||||||||||| |  ||||||| || |||||||| |||||||||| |||||||||| ||||| ||||||||||||||||    
T  23824688 tgttgacccagttcggtgcaatatgaccaaatctggggagagagcagccctccaatccactatgatgaaagtgttacaaaag 23824607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 220 - 288
Target Start/End: Original strand, 31936798 - 31936864
Alignment:
Q  220 ctcactacccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaaccc 288  Q
    |||||||||||||||| ||||||||  ||||||||||||| |||  ||| | |||||||||||||||||    
T  31936798 ctcactacccaaggtgtttacaatg--tttcccaacccaatagatcctcactacaaagacactcaaccc 31936864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 34 - 76
Target Start/End: Original strand, 22709059 - 22709102
Alignment:
Q  34 gggagagagcagctctccaatccaatatga-gaaagtgttacaa 76  Q
    |||||||||||||||||||||||| ||||| |||||||||||||    
T  22709059 gggagagagcagctctccaatccactatgatgaaagtgttacaa 22709102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 220 - 288
Target Start/End: Complemental strand, 5572117 - 5572051
Alignment:
Q  220 ctcactacccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaaccc 288  Q
    |||||||||||||||| ||||||||  |||||||||||||||||  | | | |||||||||| ||||||    
T  5572117 ctcactacccaaggtgtttacaatg--tttcccaacccaagagatccccactacaaagacacccaaccc 5572051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 220 - 288
Target Start/End: Complemental strand, 5757352 - 5757286
Alignment:
Q  220 ctcactacccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaaccc 288  Q
    |||||||||||||||| ||||||||  |||||||||||||||||  ||    |||||||||||||||||    
T  5757352 ctcactacccaaggtgtttacaatg--tttcccaacccaagagatcctaaatacaaagacactcaaccc 5757286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 227 - 277
Target Start/End: Original strand, 6005598 - 6005650
Alignment:
Q  227 cccaaggtgattacaatgt--ttttcccaacccaagagacactctcaacaaag 277  Q
    |||||||||||||||||||  ||||||||||| |||| ||||||||| |||||    
T  6005598 cccaaggtgattacaatgttgttttcccaacctaagaaacactctcatcaaag 6005650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 227 - 277
Target Start/End: Original strand, 16838925 - 16838977
Alignment:
Q  227 cccaaggtgattacaatgt--ttttcccaacccaagagacactctcaacaaag 277  Q
    |||||||||||||||||||  ||||||||||| |||| ||||||||| |||||    
T  16838925 cccaaggtgattacaatgttgttttcccaacctaagatacactctcatcaaag 16838977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 220 - 288
Target Start/End: Original strand, 22963922 - 22963988
Alignment:
Q  220 ctcactacccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaaccc 288  Q
    |||||||||||||||| ||||||||  |||||||| ||||||||   || | |||||||||||||||||    
T  22963922 ctcactacccaaggtgtttacaatg--tttcccaatccaagagatcttcactacaaagacactcaaccc 22963988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 220 - 288
Target Start/End: Complemental strand, 23824471 - 23824405
Alignment:
Q  220 ctcactacccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaaccc 288  Q
    |||||||||||||||| ||||||||  |||||||| ||||||||   || | |||||||||||||||||    
T  23824471 ctcactacccaaggtgtttacaatg--tttcccaatccaagagatcttcactacaaagacactcaaccc 23824405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 220 - 288
Target Start/End: Complemental strand, 24435845 - 24435780
Alignment:
Q  220 ctcactacccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaaccc 288  Q
    |||||||||||||||| ||||||||  ||||||||| |||||||  ||| | |||||||||||||||||    
T  24435845 ctcactacccaaggtgtttacaatg--tttcccaactcaagagaacctcac-acaaagacactcaaccc 24435780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 220 - 288
Target Start/End: Original strand, 31979735 - 31979801
Alignment:
Q  220 ctcactacccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaaccc 288  Q
    |||||||||||||||| ||||||||  |||| |||||||| |||  ||| | |||||||||||||||||    
T  31979735 ctcactacccaaggtgtttacaatg--tttctcaacccaaaagaacctcactacaaagacactcaaccc 31979801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 227 - 277
Target Start/End: Complemental strand, 33330349 - 33330297
Alignment:
Q  227 cccaaggtgattacaatgtt--tttcccaacccaagagacactctcaacaaag 277  Q
    ||||||||||||||||||||  |||||||||| |||| ||||||||| |||||    
T  33330349 cccaaggtgattacaatgttgttttcccaacctaagaaacactctcatcaaag 33330297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 227 - 277
Target Start/End: Complemental strand, 33335846 - 33335794
Alignment:
Q  227 cccaaggtgattacaatgtt--tttcccaacccaagagacactctcaacaaag 277  Q
    ||||||||||||||||||||  |||||||||| |||| ||||||||| |||||    
T  33335846 cccaaggtgattacaatgttgttttcccaacctaagaaacactctcatcaaag 33335794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 5343487 - 5343519
Alignment:
Q  1 tgttgacccagttcagccaatatggcctaatct 33  Q
    ||||||||||||||||||||| |||||||||||    
T  5343487 tgttgacccagttcagccaatgtggcctaatct 5343519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 220 - 288
Target Start/End: Complemental strand, 21801218 - 21801150
Alignment:
Q  220 ctcactacccaaggtgattacaatgtttttcccaacc--caagagacactctcaacaaagacactcaaccc 288  Q
    |||||||||||||||| ||||||||  ||||||||||  |||||||  ||| | |||||||||||||||||    
T  21801218 ctcactacccaaggtgtttacaatg--tttcccaaccctcaagagaacctcactacaaagacactcaaccc 21801150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 8 - 79
Target Start/End: Complemental strand, 21801429 - 21801354
Alignment:
Q  8 ccagttcag-ccaatatggcctaatctgggagag--agcagctctccaatccaatatga-gaaagtgttacaaaag 79  Q
    ||||||||| |||||||| ||||||||||| |||  ||||||||||||||||| || ||  |||||||||||||||    
T  21801429 ccagttcagtccaatatgacctaatctgggggagcgagcagctctccaatccactaagataaaagtgttacaaaag 21801354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0188 (Bit Score: 130; Significance: 2e-67; HSPs: 2)
Name: scaffold0188
Description:

Target: scaffold0188; HSP #1
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 1 - 305
Target Start/End: Complemental strand, 18043 - 17739
Alignment:
Q  1 tgttgacccagttcagccaatatggcctaatct--gggagagagcagctctccaatccaatatga-gaaagtgttacaaaaggttgcaagaagctctagc 97  Q
    |||||||||||||||||||||||||||||||||  |||||||||||||||||||||||| ||||| |||||||||||||| |||| ||||||    ||||    
T  18043 tgttgacccagttcagccaatatggcctaatctgggggagagagcagctctccaatccactatgatgaaagtgttacaaagggttacaagaa-aaatagc 17945  T
Q  98 tatcaagctttacacaag-acagaccctagattctaccctttggtgtttccccactctcacaagatgaaccctaaaagagaagtcactagaggaagcttt 196  Q
    |  ||||| ||||||||| |||   | ||| |||||||| || |||||||||||||||||||| ||||||||||||||||||| ||| ||||||||||||    
T  17944 ttgcaagc-ttacacaagaacaagtcatagtttctacccatttgtgtttccccactctcacaatatgaaccctaaaagagaagacacaagaggaagcttt 17846  T
Q  197 aaatccttccaaccaatgaactcctcactacccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacccattggttc 296  Q
    | ||||||||||    |||| | ||||||||||||||||||||||||||||||||||||||||||||  ||||| |||||||||||||||||    ||||    
T  17845 agatccttccaa-tggtgaaat-ctcactacccaaggtgattacaatgtttttcccaacccaagagatcctctctacaaagacactcaaccctagagttc 17748  T
Q  297 cctcctttg 305  Q
    |||||||||    
T  17747 cctcctttg 17739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0188; HSP #2
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 1 - 305
Target Start/End: Complemental strand, 24136 - 23832
Alignment:
Q  1 tgttgacccagttcagccaatatggcctaatct--gggagagagcagctctccaatccaatatga-gaaagtgttacaaaaggttgcaagaagctctagc 97  Q
    |||||||||||||||||||||||||||||||||  |||||||||||||||||||||||| ||||| |||||||||||||| |||| ||||||    ||||    
T  24136 tgttgacccagttcagccaatatggcctaatctgggggagagagcagctctccaatccactatgatgaaagtgttacaaagggttacaagaa-aaatagc 24038  T
Q  98 tatcaagctttacacaag-acagaccctagattctaccctttggtgtttccccactctcacaagatgaaccctaaaagagaagtcactagaggaagcttt 196  Q
    |  ||||| ||||||||| |||   | ||| |||||||| || |||||||||||||||||||| ||||||||||||||||||| ||| ||||||||||||    
T  24037 ttgcaagc-ttacacaagaacaagtcatagtttctacccatttgtgtttccccactctcacaatatgaaccctaaaagagaagacacaagaggaagcttt 23939  T
Q  197 aaatccttccaaccaatgaactcctcactacccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacccattggttc 296  Q
    | ||||||||||    |||| | ||||||||||||||||||||||||||||||||||||||||||||  ||||| |||||||||||||||||    ||||    
T  23938 agatccttccaa-tggtgaaat-ctcactacccaaggtgattacaatgtttttcccaacccaagagatcctctctacaaagacactcaaccctagagttc 23841  T
Q  297 cctcctttg 305  Q
    |||||||||    
T  23840 cctcctttg 23832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0135 (Bit Score: 109; Significance: 8e-55; HSPs: 2)
Name: scaffold0135
Description:

Target: scaffold0135; HSP #1
Raw Score: 109; E-Value: 8e-55
Query Start/End: Original strand, 1 - 173
Target Start/End: Complemental strand, 35141 - 34967
Alignment:
Q  1 tgttgacccagttcagccaatatggcctaatctggg--agagagcagctctccaatccaatatgagaaagtgttacaaaaggttgcaagaagctctagct 98  Q
    |||| |||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||  ||||| |||||||     
T  35141 tgttaacccagttcagccaatatggcctaatctgggggagagagcagctctccaatccaatatgagaaagtgttacaaaaggttagaagaa-ctctagcc 35043  T
Q  99 atcaagctttacacaag-acagaccctagattctaccctttggtgtttccccactctcacaagatgaaccctaaaa 173  Q
     |||||||||||||| | ||| |||||||| ||||||||||||||||||||||||||||||  |||||||||||||    
T  35042 ttcaagctttacacatgaacaaaccctagactctaccctttggtgtttccccactctcacactatgaaccctaaaa 34967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0135; HSP #2
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 226 - 307
Target Start/End: Complemental strand, 34967 - 34886
Alignment:
Q  226 acccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacccattggttccctcctttgct 307  Q
    ||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34967 acccaaggtgattacaatgttttcccaaacccaagagacactctcaacaaagacactcaacccattggttccctcctttgct 34886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0355 (Bit Score: 102; Significance: 1e-50; HSPs: 4)
Name: scaffold0355
Description:

Target: scaffold0355; HSP #1
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 1 - 173
Target Start/End: Complemental strand, 9721 - 9549
Alignment:
Q  1 tgttgacccagttcagccaatatggcctaatctggg--agagagcagctctccaatccaatatgagaaagtgttacaaaaggttgcaagaagctctagct 98  Q
    ||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||| |||||  |||||||     
T  9721 tgttgacccagttcagccaatatggcctaatctgggggagagagcagctctccaatccaatatgagaaagtgttacaaaaggttacaaga--ctctagcc 9624  T
Q  99 atcaagctttacacaag-acagaccctagattctaccctttggtgtttccccactctcacaagatgaaccctaaaa 173  Q
     |||||||||||||| | ||| |||||||| ||||||||||||| ||| ||||||||||||  |||||||||||||    
T  9623 ttcaagctttacacatgaacaaaccctaga-tctaccctttggtattttcccactctcacactatgaaccctaaaa 9549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0355; HSP #2
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 226 - 307
Target Start/End: Complemental strand, 3754 - 3672
Alignment:
Q  226 acccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaaccca-ttggttccctcctttgct 307  Q
    |||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  3754 acccaaggtgattacaatgtttttcctaacctaagagacactctcaacaaagacactcaacccatttggttccctcctttgct 3672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0355; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 91 - 173
Target Start/End: Complemental strand, 3836 - 3754
Alignment:
Q  91 ctctagctatcaagctttacacaaga-cagaccctagattctaccctttggtgtttccccactctcacaagatgaaccctaaaa 173  Q
    |||||||  |||||||||||||| || || ||||||||| |||||||||||| ||| ||||||||||||  |||||||||||||    
T  3836 ctctagccttcaagctttacacatgaacaaaccctagat-ctaccctttggtattttcccactctcacactatgaaccctaaaa 3754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0355; HSP #4
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 226 - 261
Target Start/End: Complemental strand, 9549 - 9514
Alignment:
Q  226 acccaaggtgattacaatgtttttcccaacccaaga 261  Q
    ||||||||||||||||||||||||||||||| ||||    
T  9549 acccaaggtgattacaatgtttttcccaacctaaga 9514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0464 (Bit Score: 82; Significance: 1e-38; HSPs: 2)
Name: scaffold0464
Description:

Target: scaffold0464; HSP #1
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 1 - 168
Target Start/End: Original strand, 369 - 536
Alignment:
Q  1 tgttgacccagttcagccaatatggcctaatct--gggagagagcagctctccaatccaatatgagaaagtgttacaaaaggttgcaagaagctctagc- 97  Q
    |||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||| | ||||||||||||||||| |||||  |||||||     
T  369 tgttgacccagttcagccaatatggcctaatctgggggagagagcagctctccaatccaatatgtg-aagtgttacaaaaggttacaaga--ctctagct 465  T
Q  98 tatcaagctttacacaag-acagaccctagattctaccctttggtgtttccccactctcacaagatgaaccc 168  Q
    |||||||||||||||| | ||| ||||||||  |||||||||||| ||| ||||||||||||  ||||||||    
T  466 tatcaagctttacacatgaacaaaccctaga-actaccctttggtattttcccactctcacactatgaaccc 536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0464; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 227 - 290
Target Start/End: Original strand, 542 - 605
Alignment:
Q  227 cccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacccat 290  Q
    |||||||||||||||||||||||||||||| |||| || |||||| ||||| ||| || |||||    
T  542 cccaaggtgattacaatgtttttcccaacctaagaaactctctcatcaaaggcacacaccccat 605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0197 (Bit Score: 68; Significance: 2e-30; HSPs: 4)
Name: scaffold0197
Description:

Target: scaffold0197; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 14388 - 14269
Alignment:
Q  1 tgttgacccagttcagccaatatggcctaatctggg--agagagcagctctccaatccaatatgagaaagtgttacaaaag-gttgcaagaagctctagc 97  Q
    ||||||||||||||||||||| ||||||||||||||  |||||||||||||||||||||||||| ||| |||||||||||| ||| ||||||  ||||||    
T  14388 tgttgacccagttcagccaatgtggcctaatctgggggagagagcagctctccaatccaatatgtgaatgtgttacaaaagagttacaagaa--tctagc 14291  T
Q  98 -tatcaagctttacacaagaca 118  Q
     |||||||||||||||||||||    
T  14290 ttatcaagctttacacaagaca 14269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0197; HSP #2
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 141
Target Start/End: Complemental strand, 19244 - 19102
Alignment:
Q  1 tgttgacccagttcagccaatatggcctaatctggg--agagagcagctctccaatccaatatgagaaagtgttacaaaag-gttgcaagaagctctagc 97  Q
    ||||||||||||||||||| | ||||||||||||||  |||||||||||||||||| ||||||| ||  |||||||||||| ||| ||||||  ||||||    
T  19244 tgttgacccagttcagccattgtggcctaatctgggggagagagcagctctccaatacaatatgtgagtgtgttacaaaagagttacaagaa--tctagc 19147  T
Q  98 -tatcaagctttacacaagac-agaccctagattctaccctttggt 141  Q
     |||||||||||||||||||| | |||||||| |||||||||||||    
T  19146 ttatcaagctttacacaagacaaaaccctaga-tctaccctttggt 19102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0197; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 227 - 277
Target Start/End: Complemental strand, 14213 - 14161
Alignment:
Q  227 cccaaggtgattacaatgtt--tttcccaacccaagagacactctcaacaaag 277  Q
    ||||||||||||||||||||  |||||||||| |||| ||||||||| |||||    
T  14213 cccaaggtgattacaatgttgttttcccaacctaagatacactctcatcaaag 14161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0197; HSP #4
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 228 - 277
Target Start/End: Complemental strand, 19068 - 19017
Alignment:
Q  228 ccaaggtgattacaatgtt--tttcccaacccaagagacactctcaacaaag 277  Q
    |||||||||||||||||||  |||||||||| |||| ||||||||| |||||    
T  19068 ccaaggtgattacaatgttgttttcccaacctaagaaacactctcatcaaag 19017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0259 (Bit Score: 64; Significance: 6e-28; HSPs: 2)
Name: scaffold0259
Description:

Target: scaffold0259; HSP #1
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 2330 - 2211
Alignment:
Q  1 tgttgacccagttcagccaatatggcctaatctggg--agagagcagctctccaatccaatatgagaaagtgttacaaaag-gttgcaagaagctctagc 97  Q
    ||||||||||||||||||||| ||||||||||||||  |||||| ||||||||||||||||||| ||| |||||||||||| ||| ||||||  ||||||    
T  2330 tgttgacccagttcagccaatgtggcctaatctgggggagagagtagctctccaatccaatatgtgaatgtgttacaaaagagttacaagaa--tctagc 2233  T
Q  98 -tatcaagctttacacaagaca 118  Q
     |||||||||||||||||||||    
T  2232 ttatcaagctttacacaagaca 2211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0259; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 227 - 277
Target Start/End: Complemental strand, 2155 - 2103
Alignment:
Q  227 cccaaggtgattacaatgtt--tttcccaacccaagagacactctcaacaaag 277  Q
    ||||||||||||||||||||  |||||||||| |||| ||||||||| |||||    
T  2155 cccaaggtgattacaatgttgttttcccaacctaagatacactctcatcaaag 2103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 64; Significance: 6e-28; HSPs: 2)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 149035 - 148916
Alignment:
Q  1 tgttgacccagttcagccaatatggcctaatctggg--agagagcagctctccaatccaatatgagaaagtgttacaaaag-gttgcaagaagctctagc 97  Q
    ||||||||||||||||||||| ||||||||||||||  |||||| ||||||||||||||||||| ||| |||||||||||| ||| ||||||  ||||||    
T  149035 tgttgacccagttcagccaatgtggcctaatctgggggagagagtagctctccaatccaatatgtgaatgtgttacaaaagagttacaagaa--tctagc 148938  T
Q  98 -tatcaagctttacacaagaca 118  Q
     |||||||||||||||||||||    
T  148937 ttatcaagctttacacaagaca 148916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 227 - 277
Target Start/End: Complemental strand, 148860 - 148808
Alignment:
Q  227 cccaaggtgattacaatgtt--tttcccaacccaagagacactctcaacaaag 277  Q
    ||||||||||||||||||||  |||||||||| |||| ||||||||| |||||    
T  148860 cccaaggtgattacaatgttgttttcccaacctaagatacactctcatcaaag 148808  T

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Target: scaffold0140 (Bit Score: 61; Significance: 3e-26; HSPs: 1)
Name: scaffold0140
Description:

Target: scaffold0140; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 305
Target Start/End: Complemental strand, 8511 - 8208
Alignment:
Q  1 tgttgacccagttcag-ccaatatggcctaatctggg--agagagcagctctccaatccaatatga-gaaagtgttacaaaaggttgcaagaagctctag 96  Q
    |||||||||||||| | |||||||| |||||||||||  ||||||||||||||||||||| ||||| ||||||||||||||  ||| ||||||    |||    
T  8511 tgttgacccagttcggtccaatatgacctaatctgggggagagagcagctctccaatccactatgatgaaagtgttacaaagagttacaagaa-aaatag 8413  T
Q  97 ctatcaagctttacacaag-acagaccctagattctaccctttggtgtttccccactctcacaa-gatgaaccctaaaagagaagtcactagaggaagct 194  Q
    ||  ||||| ||||||||| |||   ||||  ||||||   || |||||| ||||||||| |||  ||||||||||||||||||| ||| | ||||||||    
T  8412 cttgcaagc-ttacacaagaacaagacctaatttctacgtatttgtgttt-cccactctctcaataatgaaccctaaaagagaagacacaaaaggaagct 8315  T
Q  195 ttaaatccttccaaccaatgaactcctcactacccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacccattggt 294  Q
    || |||||||||||    |||| | |||||||||||||||| ||||||||  |||||||||||||||||  ||| | |||||||||||||||||    ||    
T  8314 tttaatccttccaa-tggtgaaat-ctcactacccaaggtgtttacaatg--tttcccaacccaagagatcctcactacaaagacactcaaccctaaagt 8219  T
Q  295 tccctcctttg 305  Q
    |||||||||||    
T  8218 tccctcctttg 8208  T

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Target: scaffold0009 (Bit Score: 49; Significance: 5e-19; HSPs: 2)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 182043 - 181980
Alignment:
Q  1 tgttgacccagttcagccaatatggcctaatct--gggagagagcagctctccaatccaatatg 62  Q
    ||||||||||||||||||||| |||||||||||  |||||||||||||||||||||||||||||    
T  182043 tgttgacccagttcagccaatgtggcctaatctgggggagagagcagctctccaatccaatatg 181980  T

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Target: scaffold0009; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 227 - 277
Target Start/End: Complemental strand, 176881 - 176829
Alignment:
Q  227 cccaaggtgattacaatgtt--tttcccaacccaagagacactctcaacaaag 277  Q
    ||||||||||||||||||||  |||||||||| |||| ||||||||| |||||    
T  176881 cccaaggtgattacaatgttgttttcccaacctaagatacactctcatcaaag 176829  T

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Target: scaffold0087 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 3)
Name: scaffold0087
Description:

Target: scaffold0087; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 128 - 288
Target Start/End: Complemental strand, 36795 - 36640
Alignment:
Q  128 ttctaccctttggtgtttccccactctcacaaga-tgaaccctaaaagagaagtcactagaggaagctttaaatccttccaaccaatgaactcctcacta 226  Q
    |||||||| || ||||||||| |||||| ||| | ||||||||||| |||||| ||| | ||||||||||  ||||||||||    |||| || ||||||    
T  36795 ttctacccatttgtgtttccc-actctctcaataatgaaccctaaa-gagaagacacaaaaggaagcttttgatccttccaatgg-tgaaatc-tcacta 36700  T
Q  227 cccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaaccc 288  Q
    ||||||||| ||||||||||||  |||||||||||||  ||| | |||||||||||||||||    
T  36699 cccaaggtgtttacaatgtttt--ccaacccaagagatcctcactacaaagacactcaaccc 36640  T

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Target: scaffold0087; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 220 - 288
Target Start/End: Complemental strand, 43835 - 43769
Alignment:
Q  220 ctcactacccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaaccc 288  Q
    |||||||||||||||| ||||||||  ||||||||||||| |||  ||| | |||||||||||||||||    
T  43835 ctcactacccaaggtgtttacaatg--tttcccaacccaaaagatcctcactacaaagacactcaaccc 43769  T

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Target: scaffold0087; HSP #3
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 44053 - 43973
Alignment:
Q  1 tgttgacccagttcag-ccaatatggcctaatctggg--agagagcagctctccaatccaatatga-gaaagtgttacaaa 77  Q
    |||||||||||||| | ||||||||  ||| ||||||  ||||||||||||||||||||| ||||| ||||||||||||||    
T  44053 tgttgacccagttcggtccaatatgatctattctgggggagagagcagctctccaatccactatgatgaaagtgttacaaa 43973  T

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Target: scaffold0036 (Bit Score: 38; Significance: 0.000000000002; HSPs: 2)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 85688 - 85768
Alignment:
Q  1 tgttgacccagttcag-ccaatatggcctaatctggg--agagagcagctctccaatccaatatga-gaaagtgttacaaa 77  Q
    |||||||||||||||| |||||||| |||||||||||  ||||||| |||||||||||||  |||| ||||||||||||||    
T  85688 tgttgacccagttcagtccaatatgacctaatctgggggagagagcggctctccaatccaccatgatgaaagtgttacaaa 85768  T

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Target: scaffold0036; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 220 - 288
Target Start/End: Original strand, 85906 - 85972
Alignment:
Q  220 ctcactacccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaaccc 288  Q
    |||||||||||| ||| |||||||||||  ||||||||||||||  ||| | |||||||||||||||||    
T  85906 ctcactacccaaagtgtttacaatgttt--cccaacccaagagatcctcactacaaagacactcaaccc 85972  T

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Target: scaffold0006 (Bit Score: 36; Significance: 0.00000000003; HSPs: 4)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 5688 - 5770
Alignment:
Q  1 tgttgacccagttcag-ccaatatggcctaatct--gggagagagcagctctccaatccaatatga-gaaagtgttacaaaag 79  Q
    |||||||||||||| | |||||||| ||||||||  ||||||||||||| || ||||||| ||||| ||||||||||||||||    
T  5688 tgttgacccagttcggtccaatatgacctaatctgggggagagagcagcccttcaatccactatgatgaaagtgttacaaaag 5770  T

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Target: scaffold0006; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 34 - 305
Target Start/End: Complemental strand, 133336 - 133070
Alignment:
Q  34 gggagagagcagctctccaatccaatatga-gaaagtgttacaaaaggttgcaagaagctctagctatcaagctttacacaag-acagaccctagattct 131  Q
    |||||||||||||||||||||||| ||||| |||| |||||||||  ||| ||||||    |||||  ||| | ||||||||| |||   ||||  ||||    
T  133336 gggagagagcagctctccaatccactatgatgaaaatgttacaaagagttacaagaa-aaatagcttgcaaac-ttacacaagaacaagacctaatttct 133239  T
Q  132 accctttggtgtttccccactctcacaa-gatgaaccctaaaagagaagtcactagaggaagctttaaatccttccaaccaatgaactcctcactaccca 230  Q
    |||| || |||||| ||||||||| |||  ||||||||| ||||||||| ||| | ||||||||||  ||||||||||    |||| | |||||||||||    
T  133238 acccatttgtgttt-cccactctctcaataatgaaccct-aaagagaagacacaaaaggaagcttttgatccttccaa-tggtgaaat-ctcactaccca 133143  T
Q  231 aggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacccattggttccctcctttg 305  Q
    ||||| ||||||||  |||||||||||||||||  ||| | ||||||| |||||||||    |||||||||||||    
T  133142 aggtgtttacaatg--tttcccaacccaagagatcctcactacaaagaaactcaaccctaaagttccctcctttg 133070  T

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Target: scaffold0006; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 220 - 287
Target Start/End: Original strand, 5908 - 5973
Alignment:
Q  220 ctcactacccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacc 287  Q
    |||||||||||||||| ||||||||  ||| |||||||||||||  ||| | ||||||||||||||||    
T  5908 ctcactacccaaggtgtttacaatg--tttgccaacccaagagatcctcactacaaagacactcaacc 5973  T

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Target: scaffold0006; HSP #4
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 2497 - 2579
Alignment:
Q  1 tgttgacccagttcag-ccaatatggcctaatct--gggagagagcagctctccaatccaatatga-gaaagtgttacaaaag 79  Q
    ||||||||||||||   |||||||| ||||||||  |||||| |||||| |||||||||| ||||| ||||||||||||||||    
T  2497 tgttgacccagttcgctccaatatgacctaatctgggggagacagcagccctccaatccactatgatgaaagtgttacaaaag 2579  T

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Target: scaffold0148 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0148
Description:

Target: scaffold0148; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 3 - 79
Target Start/End: Original strand, 10736 - 10816
Alignment:
Q  3 ttgacccagttcag-ccaatatggcctaatctggg--agagagcagctctccaatccaatatga-gaaagtgttacaaaag 79  Q
    |||||||||||| | |||||||| |||||| ||||  ||||||||||||||||||||| || || ||||||||||||||||    
T  10736 ttgacccagttcggtccaatatgacctaatttgggggagagagcagctctccaatccactaagatgaaagtgttacaaaag 10816  T

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Target: scaffold0098 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0098
Description:

Target: scaffold0098; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 76
Target Start/End: Original strand, 45276 - 45337
Alignment:
Q  18 caatatggcctaatctggg--agagagcagctctccaatccaatatga-gaaagtgttacaa 76  Q
    ||||||| |||||||||||  ||||||||||||||||||||| ||||| ||||| |||||||    
T  45276 caatatgacctaatctgggggagagagcagctctccaatccactatgatgaaagcgttacaa 45337  T

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