View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF15365_high_32 (Length: 309)

Name: NF15365_high_32
Description: NF15365
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF15365_high_32
NF15365_high_32
[»] chr5 (58 HSPs)
chr5 (14-278)||(17574318-17574582)
chr5 (14-278)||(7267843-7268107)
chr5 (14-281)||(34327632-34327900)
chr5 (16-278)||(30468141-30468404)
chr5 (16-278)||(8539675-8539938)
chr5 (17-279)||(2179786-2180050)
chr5 (17-275)||(18624870-18625129)
chr5 (68-278)||(36057526-36057737)
chr5 (24-279)||(2854197-2854451)
chr5 (11-278)||(24541067-24541336)
chr5 (29-174)||(28819391-28819536)
chr5 (189-278)||(12738736-12738825)
chr5 (189-278)||(12801559-12801648)
chr5 (14-91)||(21841179-21841256)
chr5 (189-278)||(30463900-30463989)
chr5 (189-278)||(8541271-8541360)
chr5 (134-279)||(29621761-29621906)
chr5 (16-112)||(12737305-12737401)
chr5 (16-112)||(12800128-12800224)
chr5 (61-268)||(18728508-18728716)
chr5 (14-92)||(32135708-32135786)
chr5 (144-278)||(42473597-42473731)
chr5 (61-268)||(32087524-32087732)
chr5 (189-281)||(34328827-34328919)
chr5 (144-275)||(40780553-40780684)
chr5 (189-279)||(2852885-2852975)
chr5 (189-278)||(7269446-7269535)
chr5 (189-278)||(32134231-32134320)
chr5 (189-278)||(28813765-28813856)
chr5 (189-280)||(21842992-21843083)
chr5 (155-268)||(35395343-35395456)
chr5 (189-278)||(40782211-40782300)
chr5 (61-268)||(33256410-33256618)
chr5 (189-276)||(17577935-17578022)
chr5 (189-275)||(28822090-28822176)
chr5 (189-278)||(29620138-29620227)
chr5 (61-241)||(38177999-38178180)
chr5 (61-241)||(38205223-38205404)
chr5 (187-268)||(43492131-43492212)
chr5 (191-281)||(41493841-41493931)
chr5 (14-88)||(42473507-42473581)
chr5 (17-237)||(19997159-19997380)
chr5 (67-203)||(38597020-38597157)
chr5 (155-268)||(43318061-43318174)
chr5 (28-222)||(27075876-27076071)
chr5 (154-268)||(15459189-15459303)
chr5 (70-243)||(24496778-24496952)
chr5 (26-88)||(29621693-29621755)
chr5 (166-268)||(38596878-38596980)
chr5 (219-280)||(42471546-42471607)
chr5 (143-222)||(35292371-35292450)
chr5 (56-94)||(27349331-27349369)
chr5 (153-222)||(27349212-27349281)
chr5 (56-120)||(42620685-42620749)
chr5 (60-123)||(43317965-43318028)
chr5 (60-122)||(35292287-35292349)
chr5 (26-88)||(40780700-40780762)
chr5 (62-122)||(32838407-32838467)
[»] chr3 (85 HSPs)
chr3 (14-279)||(53190639-53190904)
chr3 (16-278)||(54898437-54898699)
chr3 (14-278)||(2226032-2226296)
chr3 (14-278)||(41977750-41978014)
chr3 (14-265)||(35905592-35905843)
chr3 (14-278)||(27898960-27899225)
chr3 (15-278)||(30599798-30600062)
chr3 (14-278)||(21348723-21348988)
chr3 (17-280)||(46112485-46112749)
chr3 (14-280)||(17515308-17515575)
chr3 (14-278)||(23293049-23293314)
chr3 (17-278)||(51684610-51684872)
chr3 (17-276)||(43765139-43765399)
chr3 (14-275)||(2377032-2377294)
chr3 (45-275)||(42279510-42279741)
chr3 (14-200)||(7884753-7884939)
chr3 (11-248)||(46197750-46197988)
chr3 (14-204)||(44276075-44276266)
chr3 (26-278)||(44794208-44794460)
chr3 (27-278)||(600725-600961)
chr3 (17-213)||(48830688-48830885)
chr3 (42-278)||(3152125-3152362)
chr3 (26-272)||(2660218-2660465)
chr3 (26-232)||(19987488-19987692)
chr3 (189-279)||(23291569-23291659)
chr3 (189-281)||(611222-611314)
chr3 (189-277)||(2378983-2379071)
chr3 (61-268)||(23888678-23888886)
chr3 (189-280)||(38193510-38193601)
chr3 (189-278)||(41979352-41979441)
chr3 (189-278)||(44267981-44268070)
chr3 (189-278)||(46308807-46308896)
chr3 (189-278)||(53094273-53094362)
chr3 (189-281)||(3150249-3150341)
chr3 (189-275)||(42282473-42282559)
chr3 (189-278)||(54900074-54900163)
chr3 (17-268)||(31887314-31887566)
chr3 (67-268)||(23774162-23774363)
chr3 (189-279)||(46310436-46310526)
chr3 (48-268)||(18430164-18430385)
chr3 (189-278)||(30598337-30598426)
chr3 (189-278)||(35903825-35903914)
chr3 (189-278)||(38191895-38191984)
chr3 (189-278)||(53187742-53187831)
chr3 (45-195)||(5125884-5126035)
chr3 (48-241)||(45257113-45257307)
chr3 (189-275)||(54412547-54412633)
chr3 (217-278)||(7884927-7884988)
chr3 (189-278)||(44795890-44795979)
chr3 (143-268)||(45898337-45898462)
chr3 (189-278)||(46609149-46609238)
chr3 (189-278)||(46611303-46611392)
chr3 (197-278)||(51686402-51686483)
chr3 (57-268)||(2977231-2977443)
chr3 (189-281)||(21350605-21350697)
chr3 (61-268)||(48633887-48634099)
chr3 (45-206)||(5133068-5133230)
chr3 (46-222)||(33852561-33852738)
chr3 (197-278)||(48829356-48829437)
chr3 (189-278)||(53092623-53092712)
chr3 (189-273)||(2661908-2661992)
chr3 (189-278)||(46114105-46114195)
chr3 (189-278)||(7883328-7883417)
chr3 (155-268)||(40508912-40509025)
chr3 (159-268)||(41021008-41021117)
chr3 (56-195)||(41623735-41623875)
chr3 (45-122)||(26449181-26449258)
chr3 (189-278)||(28626411-28626500)
chr3 (48-112)||(33113074-33113138)
chr3 (56-120)||(41944712-41944776)
chr3 (155-222)||(1845840-1845907)
chr3 (189-268)||(17516973-17517052)
chr3 (158-241)||(33113184-33113267)
chr3 (48-213)||(24382786-24382952)
chr3 (189-278)||(27897151-27897239)
chr3 (190-275)||(35572525-35572610)
chr3 (141-213)||(23876965-23877037)
chr3 (56-203)||(25535150-25535298)
chr3 (74-200)||(54092764-54092892)
chr3 (189-268)||(48635375-48635454)
chr3 (61-115)||(17238246-17238300)
chr3 (248-281)||(43767075-43767108)
chr3 (67-124)||(51454158-51454215)
chr3 (189-241)||(1847647-1847699)
chr3 (189-237)||(33051467-33051515)
[»] chr8 (72 HSPs)
chr8 (14-278)||(8609667-8609931)
chr8 (14-278)||(13108216-13108480)
chr8 (15-278)||(38547228-38547491)
chr8 (11-275)||(42941777-42942042)
chr8 (14-278)||(41042463-41042728)
chr8 (14-278)||(13485978-13486243)
chr8 (14-277)||(5036446-5036714)
chr8 (17-280)||(7744994-7745258)
chr8 (17-235)||(9673047-9673266)
chr8 (36-279)||(13282477-13282707)
chr8 (28-275)||(26242207-26242455)
chr8 (14-278)||(27691154-27691419)
chr8 (45-275)||(41825554-41825785)
chr8 (18-226)||(40339563-40339772)
chr8 (68-278)||(22272334-22272547)
chr8 (26-278)||(33708695-33708947)
chr8 (189-281)||(22273891-22273983)
chr8 (189-278)||(42943426-42943515)
chr8 (189-278)||(27692837-27692926)
chr8 (197-278)||(34681074-34681155)
chr8 (197-278)||(26238726-26238807)
chr8 (61-241)||(42897680-42897861)
chr8 (54-268)||(9184393-9184608)
chr8 (189-279)||(601704-601794)
chr8 (189-278)||(33762713-33762802)
chr8 (189-278)||(38548831-38548920)
chr8 (189-281)||(29239187-29239279)
chr8 (189-278)||(5038062-5038150)
chr8 (189-278)||(13106804-13106893)
chr8 (189-278)||(29237151-29237240)
chr8 (189-278)||(33761069-33761158)
chr8 (189-278)||(35509214-35509303)
chr8 (189-277)||(33707207-33707295)
chr8 (144-278)||(27406907-27407041)
chr8 (155-268)||(31821428-31821541)
chr8 (189-278)||(35510819-35510908)
chr8 (189-278)||(41040720-41040809)
chr8 (17-268)||(38882660-38882911)
chr8 (56-194)||(11788405-11788544)
chr8 (197-280)||(41823888-41823971)
chr8 (189-278)||(8608237-8608327)
chr8 (189-275)||(13283995-13284081)
chr8 (189-279)||(13484544-13484634)
chr8 (61-242)||(33750290-33750472)
chr8 (61-222)||(37525929-37526091)
chr8 (61-241)||(1320654-1320835)
chr8 (189-278)||(15308261-15308350)
chr8 (189-278)||(15488630-15488719)
chr8 (197-278)||(43262145-43262226)
chr8 (144-260)||(15305815-15305931)
chr8 (144-260)||(15486184-15486300)
chr8 (48-241)||(8654537-8654730)
chr8 (159-241)||(31201148-31201230)
chr8 (56-200)||(15145663-15145808)
chr8 (76-127)||(11722730-11722781)
chr8 (45-127)||(6164655-6164737)
chr8 (189-275)||(9671980-9672066)
chr8 (14-88)||(27406817-27406891)
chr8 (189-266)||(3151969-3152046)
chr8 (56-117)||(28433638-28433699)
chr8 (155-268)||(32822371-32822484)
chr8 (16-88)||(15305947-15306019)
chr8 (16-88)||(15486316-15486388)
chr8 (227-278)||(600760-600811)
chr8 (153-268)||(28433715-28433830)
chr8 (161-268)||(33160155-33160262)
chr8 (189-275)||(27404213-27404299)
chr8 (155-268)||(462371-462484)
chr8 (56-120)||(40020557-40020621)
chr8 (61-124)||(32822515-32822578)
chr8 (97-203)||(37801541-37801648)
chr8 (189-268)||(44620671-44620750)
[»] chr1 (70 HSPs)
chr1 (14-280)||(34777998-34778264)
chr1 (14-278)||(4855826-4856090)
chr1 (14-278)||(27087283-27087547)
chr1 (14-278)||(31238354-31238619)
chr1 (14-278)||(6818537-6818802)
chr1 (28-278)||(25278241-25278492)
chr1 (28-278)||(37344342-37344593)
chr1 (14-279)||(2869578-2869844)
chr1 (16-280)||(50555958-50556223)
chr1 (14-278)||(3013329-3013600)
chr1 (17-238)||(15104481-15104703)
chr1 (26-278)||(46583427-46583680)
chr1 (26-275)||(33602515-33602765)
chr1 (14-159)||(26225413-26225558)
chr1 (45-275)||(52643510-52643736)
chr1 (118-278)||(51896115-51896276)
chr1 (176-278)||(25278975-25279077)
chr1 (134-280)||(9121648-9121794)
chr1 (63-222)||(51121961-51122121)
chr1 (191-280)||(8167940-8168029)
chr1 (189-278)||(31236819-31236908)
chr1 (48-268)||(42134492-42134713)
chr1 (189-277)||(50554164-50554252)
chr1 (144-279)||(47013072-47013207)
chr1 (15-86)||(51896045-51896116)
chr1 (189-278)||(8169568-8169657)
chr1 (189-279)||(46582009-46582099)
chr1 (197-279)||(52641887-52641969)
chr1 (189-278)||(26223587-26223676)
chr1 (189-278)||(34776569-34776658)
chr1 (210-277)||(6816866-6816933)
chr1 (189-275)||(3011858-3011944)
chr1 (189-275)||(51894570-51894656)
chr1 (189-278)||(25276742-25276831)
chr1 (197-278)||(37088144-37088225)
chr1 (189-278)||(37345962-37346051)
chr1 (48-236)||(45380877-45381066)
chr1 (45-195)||(43868697-43868848)
chr1 (189-279)||(2871076-2871166)
chr1 (198-278)||(25278854-25278934)
chr1 (61-268)||(36895416-36895624)
chr1 (189-279)||(1444181-1444271)
chr1 (189-278)||(4854410-4854499)
chr1 (189-278)||(9120039-9120128)
chr1 (189-278)||(27089279-27089368)
chr1 (210-279)||(33599186-33599255)
chr1 (61-268)||(31801643-31801851)
chr1 (61-268)||(46638713-46638921)
chr1 (189-278)||(47011456-47011545)
chr1 (218-278)||(45044949-45045009)
chr1 (48-123)||(18183837-18183912)
chr1 (26-88)||(1442671-1442733)
chr1 (189-267)||(33599229-33599307)
chr1 (159-236)||(27940650-27940727)
chr1 (43-124)||(33685137-33685218)
chr1 (214-277)||(1442551-1442614)
chr1 (61-124)||(6575345-6575408)
chr1 (48-241)||(44157470-44157663)
chr1 (144-205)||(1442594-1442655)
chr1 (56-117)||(5783505-5783566)
chr1 (159-268)||(47269461-47269570)
chr1 (141-268)||(5783374-5783501)
chr1 (189-268)||(44159296-44159375)
chr1 (279-309)||(1953919-1953949)
chr1 (26-80)||(9121580-9121634)
chr1 (163-241)||(18183952-18184030)
chr1 (26-88)||(47012994-47013056)
chr1 (155-268)||(35479976-35480089)
chr1 (189-241)||(27952502-27952554)
chr1 (189-241)||(35478124-35478176)
[»] chr2 (66 HSPs)
chr2 (16-278)||(16763076-16763338)
chr2 (14-280)||(19908125-19908393)
chr2 (14-280)||(17696204-17696471)
chr2 (14-278)||(44709624-44709889)
chr2 (16-278)||(39664629-39664892)
chr2 (16-278)||(40560223-40560486)
chr2 (15-278)||(14388964-14389228)
chr2 (14-274)||(42519083-42519346)
chr2 (14-278)||(2766934-2767199)
chr2 (14-278)||(6797507-6797772)
chr2 (17-278)||(39455169-39455431)
chr2 (112-242)||(16377174-16377305)
chr2 (45-285)||(37645480-37645721)
chr2 (60-236)||(7744085-7744262)
chr2 (56-268)||(17946104-17946317)
chr2 (153-278)||(24208061-24208186)
chr2 (189-278)||(39663154-39663243)
chr2 (153-278)||(6786000-6786125)
chr2 (189-278)||(16376736-16376825)
chr2 (189-280)||(14387347-14387438)
chr2 (196-275)||(19906685-19906764)
chr2 (189-278)||(16764611-16764700)
chr2 (172-281)||(19581411-19581520)
chr2 (45-125)||(10716793-10716873)
chr2 (134-278)||(37020508-37020652)
chr2 (67-241)||(37417310-37417485)
chr2 (189-278)||(34400314-34400403)
chr2 (189-278)||(39456780-39456869)
chr2 (189-278)||(40561878-40561967)
chr2 (189-278)||(6783364-6783453)
chr2 (189-278)||(24205598-24205687)
chr2 (46-200)||(62710-62866)
chr2 (61-268)||(29909566-29909774)
chr2 (189-275)||(6799408-6799494)
chr2 (56-122)||(11315258-11315324)
chr2 (159-241)||(15372536-15372618)
chr2 (14-88)||(24207971-24208045)
chr2 (189-278)||(37022185-37022274)
chr2 (70-268)||(361455-361654)
chr2 (61-222)||(39303-39465)
chr2 (45-127)||(40097700-40097782)
chr2 (56-196)||(862213-862354)
chr2 (189-278)||(2577480-2577569)
chr2 (61-268)||(25619670-25619878)
chr2 (56-238)||(26584718-26584901)
chr2 (155-241)||(39593-39679)
chr2 (14-88)||(6785901-6785975)
chr2 (154-268)||(11315335-11315449)
chr2 (48-241)||(15432365-15432559)
chr2 (26-88)||(37020658-37020720)
chr2 (56-120)||(11022935-11022999)
chr2 (56-120)||(28246801-28246865)
chr2 (234-278)||(42517558-42517602)
chr2 (188-275)||(31475079-31475166)
chr2 (61-222)||(92253-92415)
chr2 (159-241)||(41706576-41706658)
chr2 (78-195)||(42879438-42879556)
chr2 (44-124)||(42001764-42001844)
chr2 (189-268)||(41144-41223)
chr2 (97-203)||(15807861-15807968)
chr2 (97-203)||(32608009-32608116)
chr2 (188-275)||(37646477-37646564)
chr2 (45-115)||(13999962-14000032)
chr2 (56-109)||(38148645-38148698)
chr2 (56-115)||(4416866-4416926)
chr2 (189-241)||(41708432-41708484)
[»] chr4 (73 HSPs)
chr4 (11-279)||(51011925-51012193)
chr4 (14-275)||(41761605-41761867)
chr4 (19-277)||(49523125-49523384)
chr4 (11-278)||(41781539-41781807)
chr4 (14-278)||(35404304-35404569)
chr4 (17-278)||(48813787-48814049)
chr4 (17-239)||(42980674-42980897)
chr4 (17-255)||(48646609-48646848)
chr4 (29-278)||(43519424-43519674)
chr4 (47-275)||(2693145-2693373)
chr4 (17-275)||(11601674-11601932)
chr4 (18-255)||(52868031-52868250)
chr4 (14-128)||(11255799-11255913)
chr4 (189-278)||(49524733-49524822)
chr4 (48-241)||(35996100-35996294)
chr4 (189-278)||(35401749-35401838)
chr4 (189-268)||(39345574-39345653)
chr4 (189-278)||(4173740-4173829)
chr4 (189-278)||(43507167-43507256)
chr4 (189-278)||(43508653-43508742)
chr4 (189-278)||(20493827-20493916)
chr4 (189-278)||(33264382-33264471)
chr4 (189-278)||(51013886-51013975)
chr4 (197-281)||(48645252-48645336)
chr4 (61-268)||(2827417-2827622)
chr4 (189-279)||(4169685-4169775)
chr4 (189-278)||(319273-319362)
chr4 (45-200)||(50131240-50131396)
chr4 (48-241)||(2350397-2350594)
chr4 (28-275)||(7149542-7149791)
chr4 (189-274)||(11254123-11254208)
chr4 (61-241)||(47941848-47942029)
chr4 (61-260)||(44794666-44794866)
chr4 (45-112)||(27382284-27382351)
chr4 (192-278)||(320903-320989)
chr4 (159-268)||(10372711-10372820)
chr4 (188-277)||(20819986-20820075)
chr4 (45-122)||(25993653-25993730)
chr4 (189-278)||(33266010-33266099)
chr4 (188-255)||(2691396-2691463)
chr4 (46-200)||(26296785-26296940)
chr4 (155-241)||(44558494-44558580)
chr4 (189-278)||(833223-833312)
chr4 (189-278)||(5439647-5439736)
chr4 (159-268)||(10762591-10762700)
chr4 (58-124)||(4519531-4519597)
chr4 (189-278)||(5437811-5437900)
chr4 (56-120)||(5484678-5484742)
chr4 (56-120)||(32652237-32652301)
chr4 (56-120)||(42880683-42880747)
chr4 (189-273)||(43521109-43521193)
chr4 (56-120)||(43779789-43779853)
chr4 (159-278)||(835012-835131)
chr4 (141-268)||(39083649-39083776)
chr4 (154-243)||(13450980-13451069)
chr4 (56-117)||(39083780-39083841)
chr4 (56-117)||(39189523-39189584)
chr4 (189-278)||(42982452-42982541)
chr4 (61-236)||(27624848-27625024)
chr4 (56-120)||(39921632-39921696)
chr4 (48-124)||(51041824-51041900)
chr4 (197-281)||(54387890-54387973)
chr4 (141-268)||(39921504-39921631)
chr4 (189-268)||(39923009-39923088)
chr4 (141-268)||(43779854-43779981)
chr4 (69-124)||(44558407-44558462)
chr4 (141-200)||(44972489-44972548)
chr4 (189-242)||(34460261-34460314)
chr4 (56-117)||(41356094-41356155)
chr4 (141-241)||(5484577-5484677)
chr4 (144-268)||(39189392-39189516)
chr4 (189-241)||(44792971-44793023)
chr4 (56-120)||(44994209-44994273)
[»] chr7 (80 HSPs)
chr7 (14-280)||(39859088-39859355)
chr7 (16-278)||(6602335-6602598)
chr7 (17-278)||(30940287-30940549)
chr7 (14-278)||(45359336-45359601)
chr7 (16-278)||(47386070-47386333)
chr7 (17-278)||(38474005-38474267)
chr7 (17-275)||(24228271-24228530)
chr7 (17-255)||(13168143-13168385)
chr7 (14-275)||(34776774-34777036)
chr7 (16-236)||(35693231-35693454)
chr7 (17-279)||(37115402-37115651)
chr7 (26-278)||(27665936-27666189)
chr7 (18-200)||(23906124-23906307)
chr7 (26-278)||(56330-56582)
chr7 (26-278)||(29996385-29996638)
chr7 (17-222)||(48852209-48852415)
chr7 (77-275)||(37796103-37796302)
chr7 (14-168)||(46439389-46439544)
chr7 (189-278)||(23904583-23904672)
chr7 (189-278)||(13169683-13169772)
chr7 (134-278)||(20478042-20478186)
chr7 (61-268)||(46996608-46996816)
chr7 (189-275)||(39857648-39857734)
chr7 (189-278)||(35403619-35403708)
chr7 (56-222)||(1546343-1546510)
chr7 (189-279)||(37113940-37114030)
chr7 (189-275)||(48227941-48228027)
chr7 (189-278)||(78014-78103)
chr7 (141-275)||(13018036-13018172)
chr7 (189-278)||(22155847-22155936)
chr7 (189-278)||(22211762-22211851)
chr7 (189-277)||(24226582-24226670)
chr7 (69-268)||(33038711-33038911)
chr7 (189-281)||(47384291-47384383)
chr7 (189-280)||(34774996-34775087)
chr7 (189-280)||(46437105-46437196)
chr7 (189-275)||(6605397-6605483)
chr7 (189-275)||(27664433-27664519)
chr7 (189-279)||(35401968-35402058)
chr7 (189-274)||(35691431-35691516)
chr7 (58-241)||(2167516-2167700)
chr7 (45-200)||(6056844-6057000)
chr7 (189-278)||(20479719-20479808)
chr7 (73-236)||(11682823-11682987)
chr7 (57-268)||(27955380-27955592)
chr7 (58-235)||(23953848-23954026)
chr7 (217-278)||(23906295-23906356)
chr7 (56-200)||(31913547-31913692)
chr7 (201-278)||(38549547-38549624)
chr7 (48-268)||(47341575-47341800)
chr7 (45-124)||(13034828-13034907)
chr7 (218-277)||(29994907-29994966)
chr7 (56-205)||(23962377-23962527)
chr7 (192-278)||(45361279-45361365)
chr7 (56-122)||(48704337-48704403)
chr7 (188-269)||(13039641-13039722)
chr7 (56-117)||(34691136-34691197)
chr7 (195-279)||(46439539-46439623)
chr7 (159-238)||(35344295-35344374)
chr7 (188-275)||(37791657-37791744)
chr7 (61-238)||(8423187-8423365)
chr7 (26-88)||(20478192-20478254)
chr7 (45-115)||(46867825-46867895)
chr7 (68-268)||(46812495-46812696)
chr7 (141-268)||(45463680-45463807)
chr7 (56-213)||(366763-366921)
chr7 (56-213)||(7401958-7402116)
chr7 (58-124)||(38613618-38613684)
chr7 (61-222)||(40784402-40784564)
chr7 (57-122)||(2492483-2492548)
chr7 (56-117)||(45463811-45463872)
chr7 (56-120)||(4322494-4322558)
chr7 (56-120)||(48303571-48303635)
chr7 (189-268)||(46810715-46810794)
chr7 (171-241)||(38613498-38613568)
chr7 (279-309)||(39426288-39426318)
chr7 (61-126)||(35344196-35344261)
chr7 (189-241)||(8421453-8421505)
chr7 (155-203)||(19712264-19712312)
chr7 (156-200)||(31915040-31915084)
[»] scaffold1454 (1 HSPs)
scaffold1454 (14-275)||(1266-1527)
[»] chr6 (46 HSPs)
chr6 (14-277)||(11355223-11355487)
chr6 (14-278)||(32438943-32439215)
chr6 (14-277)||(20523367-20523631)
chr6 (28-278)||(32516877-32517128)
chr6 (26-278)||(13613453-13613706)
chr6 (16-226)||(9398712-9398923)
chr6 (45-278)||(6899485-6899719)
chr6 (45-274)||(10568403-10568633)
chr6 (45-200)||(7049835-7049991)
chr6 (48-263)||(14338368-14338584)
chr6 (67-275)||(7372881-7373079)
chr6 (197-281)||(10569927-10570011)
chr6 (134-260)||(3456766-3456892)
chr6 (189-279)||(11357194-11357284)
chr6 (144-278)||(32455881-32456015)
chr6 (189-279)||(32518497-32518587)
chr6 (189-279)||(18645104-18645193)
chr6 (59-263)||(3018336-3018541)
chr6 (189-278)||(7371175-7371264)
chr6 (189-278)||(9400035-9400124)
chr6 (189-278)||(20525334-20525423)
chr6 (61-268)||(29077338-29077546)
chr6 (199-278)||(7051255-7051334)
chr6 (213-280)||(8605349-8605416)
chr6 (197-279)||(6902906-6902987)
chr6 (189-278)||(3480657-3480746)
chr6 (45-122)||(24662615-24662692)
chr6 (54-222)||(30891180-30891349)
chr6 (189-278)||(32454248-32454337)
chr6 (200-274)||(33276805-33276879)
chr6 (61-241)||(4641392-4641573)
chr6 (197-278)||(13610690-13610771)
chr6 (78-237)||(2968180-2968340)
chr6 (44-199)||(25171998-25172154)
chr6 (210-278)||(32437140-32437208)
chr6 (26-88)||(3456898-3456960)
chr6 (56-120)||(17951964-17952028)
chr6 (56-120)||(35175785-35175849)
chr6 (197-275)||(21068628-21068706)
chr6 (159-241)||(29112337-29112419)
chr6 (26-88)||(32455803-32455865)
chr6 (217-274)||(7049790-7049847)
chr6 (97-203)||(11163875-11163982)
chr6 (141-268)||(17952029-17952156)
chr6 (153-268)||(35175862-35175977)
chr6 (231-275)||(21091109-21091153)
[»] scaffold0564 (1 HSPs)
scaffold0564 (14-276)||(8264-8525)
[»] scaffold0058 (3 HSPs)
scaffold0058 (26-278)||(3294-3547)
scaffold0058 (26-278)||(4466-4719)
scaffold0058 (189-278)||(14343-14432)
[»] scaffold0024 (1 HSPs)
scaffold0024 (29-200)||(37282-37454)
[»] scaffold0345 (1 HSPs)
scaffold0345 (189-279)||(1555-1645)
[»] scaffold0129 (1 HSPs)
scaffold0129 (56-200)||(4537-4682)
[»] scaffold0081 (1 HSPs)
scaffold0081 (189-278)||(54258-54347)
[»] scaffold0477 (1 HSPs)
scaffold0477 (61-241)||(6540-6721)
[»] scaffold1712 (1 HSPs)
scaffold1712 (189-278)||(982-1071)
[»] scaffold0002 (1 HSPs)
scaffold0002 (202-282)||(436261-436341)
[»] scaffold0092 (1 HSPs)
scaffold0092 (97-203)||(36792-36899)
[»] scaffold0146 (1 HSPs)
scaffold0146 (61-115)||(15899-15953)


Alignment Details
Target: chr5 (Bit Score: 241; Significance: 1e-133; HSPs: 58)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 241; E-Value: 1e-133
Query Start/End: Original strand, 14 - 278
Target Start/End: Complemental strand, 17574582 - 17574318
Alignment:
Q  14 aggaaaaattatactgaaaagttaagtctcgaatttttaccatttccatcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaa 113  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17574582 aggaaaaattatactgaaaagttaagtctcgaatttttaccatttccatcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaa 17574483  T
Q  114 cacagcatgcaagagatacgtcatcaccactaacggaggttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatattt 213  Q
    ||||||||||||| || ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17574482 cacagcatgcaagggacacgtcatcaccactaacggagcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatattt 17574383  T
Q  214 tgcaaaattcagagacgaatttggccgattttttaaaattcagggacgaatttgaggtattagtc 278  Q
     ||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  17574382 cgcaaaattcagggacgaatttggccgattttttaaaattcaaggacgaatttgaggtattagtc 17574318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 213; E-Value: 1e-117
Query Start/End: Original strand, 14 - 278
Target Start/End: Complemental strand, 7268107 - 7267843
Alignment:
Q  14 aggaaaaattatactgaaaagttaagtctcgaatttttaccatttccatcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaa 113  Q
    ||||||||||||| ||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7268107 aggaaaaattatattgaaaagttaagtttcgaatttttacaatttccatcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaa 7268008  T
Q  114 cacagcatgcaagagatacgtcatcaccactaacggaggttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatattt 213  Q
    |||| ||||| || || ||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  7268007 cacatcatgcgagggacacgtcatcaccactaacggagcttttggacggagggatcattttgatggacgtctgtaaaattcagggactaaatagatattt 7267908  T
Q  214 tgcaaaattcagagacgaatttggccgattttttaaaattcagggacgaatttgaggtattagtc 278  Q
     ||||||||||| ||||||||||| ||||||||||||||||| ||||||||||||||||||||||    
T  7267907 cgcaaaattcagtgacgaatttggacgattttttaaaattcaaggacgaatttgaggtattagtc 7267843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 14 - 281
Target Start/End: Complemental strand, 34327900 - 34327632
Alignment:
Q  14 aggaaaaattatactgaaaagttaagtctcgaatttttaccatttccatcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaa 113  Q
    ||||||||||| || |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  34327900 aggaaaaattacaccgaaaagttaaatctcgaatttttaccatttccatcaatttagtccttgtacacgtggctgccttgttgacacgtgtacatgacaa 34327801  T
Q  114 cacagcatgcaagag-atacgtcatcaccactaacggaggttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatatt 212  Q
    | || |||||||||| | || |||||||||||||| ||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  34327800 cgcaacatgcaagaggacacatcatcaccactaacagagcttttggacggagagaccattttgatggacgtctgtaaaattcagggactaaatagatatt 34327701  T
Q  213 ttgcaaaattcagagacgaatttggccgattttttaaaattcagggacgaatttgaggtattagtctat 281  Q
    | ||||||||||| ||||||||||||| |||||  |||||||| |||||||||||||||||||||||||    
T  34327700 tcgcaaaattcagcgacgaatttggccaattttagaaaattcaaggacgaatttgaggtattagtctat 34327632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 16 - 278
Target Start/End: Original strand, 30468141 - 30468404
Alignment:
Q  16 gaaaaattatactgaaaagttaagtctcgaatttttaccatttccatcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaaca 115  Q
    ||||||||| ||||||||||||| |||| ||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||| |||||||    
T  30468141 gaaaaattacactgaaaagttaaatctcaaatttttaccatttccatcaaattagtccttgtacacgtggttgccttgttgacacgtgtacatgacaaca 30468240  T
Q  116 cagcatgcaagag-atacgtcatcaccactaacggaggttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatatttt 214  Q
    || |||||||||| | ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||     
T  30468241 caacatgcaagaggacacgtcatcaccactaacggagcttttggacggagggaccattttgatggacgtctgtaaaattcaaggactaaatagatatttc 30468340  T
Q  215 gcaaaattcagagacgaatttggccgattttttaaaattcagggacgaatttgaggtattagtc 278  Q
    |||||||| ||||||||||||| || ||||||||||||||| ||||||| ||||||||| ||||    
T  30468341 gcaaaattgagagacgaatttgaccaattttttaaaattcaaggacgaaattgaggtatcagtc 30468404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 164; E-Value: 1e-87
Query Start/End: Original strand, 16 - 278
Target Start/End: Complemental strand, 8539938 - 8539675
Alignment:
Q  16 gaaaaattatactgaaaagttaagtctcgaatttttaccatttccatcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaaca 115  Q
    ||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||    
T  8539938 gaaaaattacactgaaaagttaaatctcgaatttttaccatttccatcaatttagtccttgcacacgtggctgccttgttgacacgtgtacatgacaaca 8539839  T
Q  116 cagcatgcaaga-gatacgtcatcaccactaacggaggttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatatttt 214  Q
    || ||||||||| || ||  ||||| ||||||||||| ||||||| |||| ||| |||||||||||||| |||||||||||||||||||||||||||||     
T  8539838 caacatgcaagaggacacaccatcaacactaacggagcttttggatggagcgactattttgatggacgtttgtaaaattcagggactaaatagatatttc 8539739  T
Q  215 gcaaaattcagagacgaatttggccgattttttaaaattcagggacgaatttgaggtattagtc 278  Q
    ||||||||||   |||||||||   ||||||| |||||||| ||||||||||||||||||||||    
T  8539738 gcaaaattcaagaacgaatttgattgatttttcaaaattcaaggacgaatttgaggtattagtc 8539675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 161; E-Value: 7e-86
Query Start/End: Original strand, 17 - 279
Target Start/End: Complemental strand, 2180050 - 2179786
Alignment:
Q  17 aaaaattatactgaaaagttaagtctcgaattttt-accatttccatcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaaca 115  Q
    |||||||| | |||||||| || |||| ||||||| ||||||| |||||| |||||||||||||| |||||||||||||||||||||||||| |||||||    
T  2180050 aaaaattacattgaaaagtcaaatctcaaattttttaccattttcatcaaattagtccttgtacatgtggctgccttgttgacacgtgtacatgacaaca 2179951  T
Q  116 cagcatgcaagag-atacgtcatcaccactaacggaggttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatatttt 214  Q
    || |||||||||| | | |||||||||||||| |||| |||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||     
T  2179950 caacatgcaagaggacatgtcatcaccactaatggagcttttggacggagggaccattttgatggatgtctgtaaaattcagggattaaatagatatttc 2179851  T
Q  215 gcaaaattcagagacgaatttggccgattttttaaaattcagggacgaatttgaggtattagtct 279  Q
     |||||||||| |||||||||| |||||||||||||||||| |||| ||||||||||||||||||    
T  2179850 acaaaattcagggacgaatttgaccgattttttaaaattcaaggacaaatttgaggtattagtct 2179786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 156; E-Value: 7e-83
Query Start/End: Original strand, 17 - 275
Target Start/End: Original strand, 18624870 - 18625129
Alignment:
Q  17 aaaaattatactgaaaagttaagtctcgaatttttaccatttccatcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacac 116  Q
    |||||| | ||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||| ||||||||||    
T  18624870 aaaaatgacactgaaaagttaaatctcgaatttttaccatttccatcaaattagtccttgtacacgtggttgccttgttgacacgtgtataagacaacac 18624969  T
Q  117 agcatgcaag-agatacgtcatcaccactaacggaggttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatattttg 215  Q
    | |||||||| ||| || ||||||| |||||||||| ||||||||||| ||||||||||||||||||  |||||||||||||||||||||||||||||      
T  18624970 aacatgcaagaagacacatcatcactactaacggagcttttggacggaaggaccattttgatggacgagtgtaaaattcagggactaaatagatatttca 18625069  T
Q  216 caaaattcagagacgaatttggccgattttttaaaattcagggacgaatttgaggtatta 275  Q
    |||||||||| ||||||||| || |||   | |||||||| |||||||||||||||||||    
T  18625070 caaaattcagggacgaatttagctgatcagtgaaaattcaaggacgaatttgaggtatta 18625129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 156; E-Value: 7e-83
Query Start/End: Original strand, 68 - 278
Target Start/End: Original strand, 36057526 - 36057737
Alignment:
Q  68 tagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacacagcatgcaaga-gatacgtcatcaccactaacggaggttttggacggaggg 166  Q
    ||||||||||||| |||||||||||||||||||||||||| ||||||||| ||||||||| || || ||||||||| |||||||| ||||||||||||||    
T  36057526 tagtccttgtacatgtggctgccttgttgacacgtgtacatgacaacacaacatgcaagatgacacatcatcaccattaacggagcttttggacggaggg 36057625  T
Q  167 accattttgatggacgtctgtaaaattcagggactaaatagatattttgcaaaattcagagacgaatttggccgattttttaaaattcagggacgaattt 266  Q
    |||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||| |||||||||||||||||||| |||||||| ||||||||||    
T  36057626 accattttgatggacgtctgtaaaattcagggtctaaatagatatttcgcaaaattcagggacgaatttggccgatttttgaaaattcaaggacgaattt 36057725  T
Q  267 gaggtattagtc 278  Q
    ||||||||||||    
T  36057726 gaggtattagtc 36057737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 129; E-Value: 9e-67
Query Start/End: Original strand, 24 - 279
Target Start/End: Original strand, 2854197 - 2854451
Alignment:
Q  24 atactgaaaagttaagtctcgaatttttaccatttccatcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacacagcatgc 123  Q
    ||||||||| ||||| | ||||||||| ||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||| |||||||    
T  2854197 atactgaaatgttaaatatcgaattttgaccatttccatcaatttagtccttgtacacgtggctgacttgctgacacgtgtacaagacaaca-agcatgc 2854295  T
Q  124 aag-agatacgtcatcaccactaacggaggttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatattttgcaaaatt 222  Q
    ||| ||  || ||||||| | ||| |||  |||||||||||||||| | |||| ||||||||||||||||||||||||||| | ||| ||| | ||||||    
T  2854296 aagaagccacatcatcactattaatggaccttttggacggagggacgaatttgttggacgtctgtaaaattcagggactaatttgat-tttcgaaaaatt 2854394  T
Q  223 cagagacgaatttggccgattttttaaaattcagggacgaatttgaggtattagtct 279  Q
    ||| |||||| ||| ||||||||| |||||||| |||||||||||||||||||||||    
T  2854395 cagggacgaaattgaccgatttttcaaaattcaaggacgaatttgaggtattagtct 2854451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 126; E-Value: 5e-65
Query Start/End: Original strand, 11 - 278
Target Start/End: Original strand, 24541067 - 24541336
Alignment:
Q  11 cataggaaaaattatactgaaaagttaagtctcgaatttttaccatttccatcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaaga 110  Q
    |||||||||||  | ||||||| ||||| | ||||||||| ||||||||||||||||||||||||||||| ||||||| |||| ||||||||||||| ||    
T  24541067 cataggaaaaaaaagactgaaatgttaaatatcgaattttgaccatttccatcaatttagtccttgtacatgtggctgacttgctgacacgtgtacagga 24541166  T
Q  111 caacacagcatgcaaga-gatacgtcatcaccactaacggaggttttggacggagg-gaccattttgatggacgtctgtaaaattcagggactaaataga 208  Q
    ||||| ||||||||||| |  || ||||||| | |||  ||  ||||||||||||| ||  | |||||||||||||||||||||||||||||||| | ||    
T  24541167 caacaaagcatgcaagaagccacatcatcactattaatagaccttttggacggaggagatgaatttgatggacgtctgtaaaattcagggactaatttga 24541266  T
Q  209 tattttgcaaaattcagagacgaatttggccgattttttaaaattcagggacgaatttgaggtattagtc 278  Q
    ||||| ||||||||||| |||||| ||||||||||||| ||||||||  |||||||||||||||||||||    
T  24541267 tatttcgcaaaattcagggacgaaattggccgatttttcaaaattcaatgacgaatttgaggtattagtc 24541336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 29 - 174
Target Start/End: Complemental strand, 28819536 - 28819391
Alignment:
Q  29 gaaaagttaagtctcgaatttttaccatttccatcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacacagcatgcaaga- 127  Q
    |||||||||| ||||||||||||||||||| |||||||||||||||||| ||||||| ||||||||||||||||||||| |||| |||| |||| ||||     
T  28819536 gaaaagttaa-tctcgaatttttaccattttcatcaatttagtccttgtgcacgtggttgccttgttgacacgtgtacatgacatcacatcatgtaagag 28819438  T
Q  128 gatacgtcatcaccactaacggaggttttggacggagggaccatttt 174  Q
    || || |||||| ||||||||||| ||||||||||||||||||||||    
T  28819437 gacacatcatcatcactaacggagcttttggacggagggaccatttt 28819391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 189 - 278
Target Start/End: Original strand, 12738736 - 12738825
Alignment:
Q  189 aaattcagggactaaatagatattttgcaaaattcagagacgaatttggccgattttttaaaattcagggacgaatttgaggtattagtc 278  Q
    ||||||||||||||||||||||||| |||||||||||  |||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  12738736 aaattcagggactaaatagatatttcgcaaaattcaggtacgaatttggccgattttttaaaattcaaggacgaatttgaggtattagtc 12738825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 189 - 278
Target Start/End: Original strand, 12801559 - 12801648
Alignment:
Q  189 aaattcagggactaaatagatattttgcaaaattcagagacgaatttggccgattttttaaaattcagggacgaatttgaggtattagtc 278  Q
    ||||||||||||||||||||||||| |||||||||||  |||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  12801559 aaattcagggactaaatagatatttcgcaaaattcaggtacgaatttggccgattttttaaaattcaaggacgaatttgaggtattagtc 12801648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 14 - 91
Target Start/End: Complemental strand, 21841256 - 21841179
Alignment:
Q  14 aggaaaaattatactgaaaagttaagtctcgaatttttaccatttccatcaatttagtccttgtacacgtggctgcct 91  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21841256 aggaaaaattatattgaaaagttaagtctcgaatttttaccatttccatcaatttagtccttgtacacgtggctgcct 21841179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 189 - 278
Target Start/End: Complemental strand, 30463989 - 30463900
Alignment:
Q  189 aaattcagggactaaatagatattttgcaaaattcagagacgaatttggccgattttttaaaattcagggacgaatttgaggtattagtc 278  Q
    ||||||||||||||||||||||||| ||||||||||| |||||||||| |||||||||||||||||| ||||||||||||||||||||||    
T  30463989 aaattcagggactaaatagatatttcgcaaaattcagggacgaatttgaccgattttttaaaattcaaggacgaatttgaggtattagtc 30463900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 189 - 278
Target Start/End: Original strand, 8541271 - 8541360
Alignment:
Q  189 aaattcagggactaaatagatattttgcaaaattcagagacgaatttggccgattttttaaaattcagggacgaatttgaggtattagtc 278  Q
    ||||||| ||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||  |||||||||||||||||||||    
T  8541271 aaattcaaggactaaatagatatttcgcaaaattcagggacgaatttggccgattttttaaaattcaatgacgaatttgaggtattagtc 8541360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 134 - 279
Target Start/End: Original strand, 29621761 - 29621906
Alignment:
Q  134 tcatcaccactaacggaggttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatattttgcaaaattcagagacgaat 233  Q
    ||||||| | |||||||  ||||||||||||||||   ||||||||||||||| |||||||||||||||| | ||||||| | ||||||||| ||||||     
T  29621761 tcatcactattaacggacattttggacggagggactgatttgatggacgtctgcaaaattcagggactaatttgatatttcgaaaaattcagggacgaaa 29621860  T
Q  234 ttggccgattttttaaaattcagggacgaatttgaggtattagtct 279  Q
    ||||||||||||| ||||||||  ||| | ||||||||||||||||    
T  29621861 ttggccgatttttcaaaattcaatgactattttgaggtattagtct 29621906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 16 - 112
Target Start/End: Complemental strand, 12737401 - 12737305
Alignment:
Q  16 gaaaaattatactgaaaagttaagtctcgaatttttaccatttccatcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagaca 112  Q
    ||||||||| | |||||||| || |||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||| ||||    
T  12737401 gaaaaattacattgaaaagtcaaatctcgaatttttaccatttccatcaaattagtccttgtacacgtggctgtcttgttgacacgtgtacatgaca 12737305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 16 - 112
Target Start/End: Complemental strand, 12800224 - 12800128
Alignment:
Q  16 gaaaaattatactgaaaagttaagtctcgaatttttaccatttccatcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagaca 112  Q
    ||||||||| | |||||||| || |||||||||||||||||| ||||||| |||||||||||||||||||||| |||||||||||||||||| ||||    
T  12800224 gaaaaattacattgaaaagtcaaatctcgaatttttaccattgccatcaaattagtccttgtacacgtggctgtcttgttgacacgtgtacatgaca 12800128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 61 - 268
Target Start/End: Original strand, 18728508 - 18728716
Alignment:
Q  61 atcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacacagcatgcaaga-gatacgtcatcaccactaacggaggttttgga 159  Q
    ||||| ||||||| |  |||||||||| |||| ||| |||||||||||||||||||||||||||||  || |  ||| ||   ||||| |||   |||||    
T  18728508 atcaaattagtcccttaacacgtggcttccttcttgccacgtgtacaagacaacacagcatgcaaggtgacagatcagcaaggctaacagagcacttgga 18728607  T
Q  160 cggagggaccattttgatggacgtctgtaaaattcagggactaaatagatattttgcaaaattcagagacgaatttggccgattttttaaaattcaggga 259  Q
    |||||||||| ||||||||||||||||  ||||||||||||||| | ||||||| ||| |||| || |||||| ||||||||    | ||||||||||||    
T  18728608 cggagggacctttttgatggacgtctgacaaattcagggactaagttgatatttcgcataattaagggacgaagttggccgacaagtgaaaattcaggga 18728707  T
Q  260 cgaatttga 268  Q
    |||||||||    
T  18728708 cgaatttga 18728716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 14 - 92
Target Start/End: Original strand, 32135708 - 32135786
Alignment:
Q  14 aggaaaaattatactgaaaagttaagtctcgaatttttaccatttccatcaatttagtccttgtacacgtggctgcctt 92  Q
    ||||||||||| ||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||| ||||||    
T  32135708 aggaaaaattacactgaaaagttaaatctcgaatttttactatttccatcaatttagtccttgtacacgtggatgcctt 32135786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 144 - 278
Target Start/End: Original strand, 42473597 - 42473731
Alignment:
Q  144 taacggaggttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatattttgcaaaattcagagacgaatttggccgatt 243  Q
    |||||||  ||||||||||| ||||   |||||||||||||||||||||||||||||||  | ||||||| | | ||||||| |||||| ||||||||||    
T  42473597 taacggacattttggacggaaggactgatttgatggacgtctgtaaaattcagggactattttgatatttcgaataattcagggacgaaattggccgatt 42473696  T
Q  244 ttttaaaattcagggacgaatttgaggtattagtc 278  Q
    ||| |||||||| |||| | |||||||||||||||    
T  42473697 tttcaaaattcaaggactattttgaggtattagtc 42473731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 61 - 268
Target Start/End: Complemental strand, 32087732 - 32087524
Alignment:
Q  61 atcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacacagcatgcaaga-gatacgtcatcaccactaacggaggttttgga 159  Q
    ||||| ||||||| || |||||||||| |||| ||| |||| ||||||||||||||||||||||||  ||||  ||| ||   ||||| |||   |||||    
T  32087732 atcaaattagtccctgaacacgtggcttccttcttgccacgcgtacaagacaacacagcatgcaaggcgatagatcagcaaggctaacagagcacttgga 32087633  T
Q  160 cggagggaccattttgatggacgtctgtaaaattcagggactaaatagatattttgcaaaattcagagacgaatttggccgattttttaaaattcaggga 259  Q
    |||||||||| |||||||||||||||| |||||| ||||||||| | ||||||| ||| |||| || |||||| |||  |||    | ||||||||||||    
T  32087632 cggagggacctttttgatggacgtctgaaaaattaagggactaagttgatatttcgcataattaagggacgaagttgatcgacgcgtgaaaattcaggga 32087533  T
Q  260 cgaatttga 268  Q
    |||||||||    
T  32087532 cgaatttga 32087524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 189 - 281
Target Start/End: Original strand, 34328827 - 34328919
Alignment:
Q  189 aaattcagggactaaatagatattttgcaaaattcagagacgaatttggccgattttttaaaattcagggacgaatttgaggtattagtctat 281  Q
    ||||||| |||| |||||| ||||||||||||||||  |||||||||| ||||||||| |||||||| |||||||||||||||||||||||||    
T  34328827 aaattcaaggacaaaatagctattttgcaaaattcatggacgaatttgaccgatttttgaaaattcaaggacgaatttgaggtattagtctat 34328919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 144 - 275
Target Start/End: Complemental strand, 40780684 - 40780553
Alignment:
Q  144 taacggaggttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatattttgcaaaattcagagacgaatttggccgatt 243  Q
    |||||||  ||||||||||||||||   |||||||||||| || |||||||||||||||| | ||||||| | ||||||||| |||||| ||| ||||||    
T  40780684 taacggacattttggacggagggactgatttgatggacgtttgcaaaattcagggactaatttgatatttcgaaaaattcagggacgaaattgtccgatt 40780585  T
Q  244 ttttaaaattcagggacgaatttgaggtatta 275  Q
    ||| |||||||| |||| | ||||||||||||    
T  40780584 tttcaaaattcaaggactattttgaggtatta 40780553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 189 - 279
Target Start/End: Complemental strand, 2852975 - 2852885
Alignment:
Q  189 aaattcagggactaaatagatattttgcaaaattcagagacgaatttggccgattttttaaaattcagggacgaatttgaggtattagtct 279  Q
    ||||||||| ||||| | ||||||| ||||||||||| |||||| ||| |||||||||||||||||| |||||||||||||||||||||||    
T  2852975 aaattcaggaactaatttgatatttcgcaaaattcagggacgaaattgaccgattttttaaaattcaaggacgaatttgaggtattagtct 2852885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 189 - 278
Target Start/End: Original strand, 7269446 - 7269535
Alignment:
Q  189 aaattcagggactaaatagatattttgcaaaattcagagacgaatttggccgattttttaaaattcagggacgaatttgaggtattagtc 278  Q
    ||||||||||||||| | ||||||| ||||||||||| |||||| || |||||||||||||||||||  |||||||||||||||||||||    
T  7269446 aaattcagggactaatttgatatttcgcaaaattcagggacgaaattagccgattttttaaaattcaaagacgaatttgaggtattagtc 7269535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 189 - 278
Target Start/End: Complemental strand, 32134320 - 32134231
Alignment:
Q  189 aaattcagggactaaatagatattttgcaaaattcagagacgaatttggccgattttttaaaattcagggacgaatttgaggtattagtc 278  Q
    |||||||||||||||||||||||||| ||||||||| ||||||||||||  ||||||| ||||||||  ||| |||||||||||||||||    
T  32134320 aaattcagggactaaatagatattttacaaaattcaaagacgaatttggttgatttttgaaaattcaatgacaaatttgaggtattagtc 32134231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 189 - 278
Target Start/End: Original strand, 28813765 - 28813856
Alignment:
Q  189 aaattcagggactaaatagatattttgcaaaattcagagacgaatttggccga--ttttttaaaattcagggacgaatttgaggtattagtc 278  Q
    ||||||||||||||||||||||||| ||||||||||  ||||||||||||| |  |||||| ||||||| ||||||||||||||||||||||    
T  28813765 aaattcagggactaaatagatatttcgcaaaattcaaggacgaatttggccaatttttttttaaattcaaggacgaatttgaggtattagtc 28813856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 189 - 280
Target Start/End: Original strand, 21842992 - 21843083
Alignment:
Q  189 aaattcagggactaaatagatattttgcaaaattcagagacgaatttggccgattttttaaaattcagggacgaatttgaggtattagtcta 280  Q
    ||||||||||||||| | ||||||| ||||||||||  ||| || ||| ||||||||| |||||||| ||||||||||||||||||||||||    
T  21842992 aaattcagggactaatttgatatttcgcaaaattcatggacaaaattgaccgatttttcaaaattcaaggacgaatttgaggtattagtcta 21843083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 155 - 268
Target Start/End: Complemental strand, 35395456 - 35395343
Alignment:
Q  155 ttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatattttgcaaaattcagagacgaatttggccgattttttaaaattc 254  Q
    ||||||||||||||| |||||||||||||||   ||||||||| ||||||| ||||||| ||| |||| || |||||| ||||||||  | | |||||||    
T  35395456 ttggacggagggacctttttgatggacgtctaacaaattcaggaactaaattgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattc 35395357  T
Q  255 agggacgaatttga 268  Q
    ||||| ||||||||    
T  35395356 agggatgaatttga 35395343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 189 - 278
Target Start/End: Original strand, 40782211 - 40782300
Alignment:
Q  189 aaattcagggactaaatagatattttgcaaaattcagagacgaatttggccgattttttaaaattcagggacgaatttgaggtattagtc 278  Q
    ||||||||||||||| | ||||||| | ||||||||| |||||| ||||||||||||| |||||||| |||| | |||||||||||||||    
T  40782211 aaattcagggactaatttgatatttcgaaaaattcagggacgaaattggccgatttttcaaaattcaaggactattttgaggtattagtc 40782300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 61 - 268
Target Start/End: Complemental strand, 33256618 - 33256410
Alignment:
Q  61 atcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacacagcatgcaaga-gatacgtcatcaccactaacggaggttttgga 159  Q
    ||||| ||||||| || |||||||||| |||| ||| |||  ||||||||||||||||||||||||  || |  ||| ||   ||||||||||  |||||    
T  33256618 atcaaattagtccctgaacacgtggcttccttcttgccactcgtacaagacaacacagcatgcaaggtgacagatcagcaaggctaacggaggacttgga 33256519  T
Q  160 cggagggaccattttgatggacgtctgtaaaattcagggactaaatagatattttgcaaaattcagagacgaatttggccgattttttaaaattcaggga 259  Q
    |||||||||  ||||||||||||||||  |||||||  || ||| | ||||||| ||| |||| |  || ||| ||||||||  | | ||||||||||||    
T  33256518 cggagggacttttttgatggacgtctgacaaattcaaagattaagttgatatttcgcataattgaaggatgaagttggccgacgtgtaaaaattcaggga 33256419  T
Q  260 cgaatttga 268  Q
    |||||||||    
T  33256418 cgaatttga 33256410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 189 - 276
Target Start/End: Original strand, 17577935 - 17578022
Alignment:
Q  189 aaattcagggactaaatagatattttgcaaaattcagagacgaatttggccgattttttaaaattcagggacgaatttgaggtattag 276  Q
    ||||||| | ||||| | ||||||||||||||||||| || ||| | ||||||||||| |||||||| ||||||||||||||||||||    
T  17577935 aaattcatgaactaatttgatattttgcaaaattcagggaagaaatgggccgatttttcaaaattcaaggacgaatttgaggtattag 17578022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 189 - 275
Target Start/End: Original strand, 28822090 - 28822176
Alignment:
Q  189 aaattcagggactaaatagatattttgcaaaattcagagacgaatttggccgattttttaaaattcagggacgaatttgaggtatta 275  Q
    ||||||| |||| ||||||  |||| ||||||||||| |||||||||| || |||||| |||||||| |||||||||||||||||||    
T  28822090 aaattcaaggacaaaatagcaatttcgcaaaattcagggacgaatttgacctatttttaaaaattcaaggacgaatttgaggtatta 28822176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 189 - 278
Target Start/End: Complemental strand, 29620227 - 29620138
Alignment:
Q  189 aaattcagggactaaatagatattttgcaaaattcagagacgaatttggccgattttttaaaattcagggacgaatttgaggtattagtc 278  Q
    |||||||| |||||| | ||||||| | ||||||||| |||||| ||||||||||||| |||||||| |||| | |||||||||||||||    
T  29620227 aaattcagagactaatttgatatttcgaaaaattcagggacgaaattggccgatttttcaaaattcaaggactattttgaggtattagtc 29620138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 61 - 241
Target Start/End: Original strand, 38177999 - 38178180
Alignment:
Q  61 atcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacacagcatgcaaga-gatacgtcatcaccactaacggaggttttgga 159  Q
    ||||| |||||||||| ||||||| || |||| |||  |||||||||||||||||||||||||| || || |  ||| ||   |||||||||    ||||    
T  38177999 atcaagttagtccttgaacacgtgacttcctttttgctacgtgtacaagacaacacagcatgcaggacgacatatcagcatggctaacggagcacatgga 38178098  T
Q  160 cggagggaccattttgatggacgtctgtaaaattcagggactaaatagatattttgcaaaattcagagacgaatttggccga 241  Q
    || ||||||| ||||||||||||||||  ||||||||  ||||||| ||||||| ||| |||| || || ||||||| ||||    
T  38178099 cgaagggacctttttgatggacgtctgacaaattcagatactaaattgatatttcgcataattgagggatgaatttgaccga 38178180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 61 - 241
Target Start/End: Original strand, 38205223 - 38205404
Alignment:
Q  61 atcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacacagcatgcaaga-gatacgtcatcaccactaacggaggttttgga 159  Q
    ||||| |||||||||| ||||||| || |||| |||  |||||||||||||||||||||||||| || || |  ||| ||   |||||||||    ||||    
T  38205223 atcaagttagtccttgaacacgtgacttcctttttgctacgtgtacaagacaacacagcatgcaggacgacatatcagcatggctaacggagcacatgga 38205322  T
Q  160 cggagggaccattttgatggacgtctgtaaaattcagggactaaatagatattttgcaaaattcagagacgaatttggccga 241  Q
    || ||||||| ||||||||||||||||  ||||||||  ||||||| ||||||| ||| |||| || || ||||||| ||||    
T  38205323 cgaagggacctttttgatggacgtctgacaaattcagatactaaattgatatttcgcataattgagggatgaatttgaccga 38205404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 187 - 268
Target Start/End: Original strand, 43492131 - 43492212
Alignment:
Q  187 taaaattcagggactaaatagatattttgcaaaattcagagacgaatttggccgattttttaaaattcagggacgaatttga 268  Q
    ||||||||||||||||||||||||||| ||||||||||| || ||| ||||| ||||||| |||||| | | ||||||||||    
T  43492131 taaaattcagggactaaatagatatttcgcaaaattcagggatgaacttggctgatttttgaaaatttaagtacgaatttga 43492212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 191 - 281
Target Start/End: Complemental strand, 41493931 - 41493841
Alignment:
Q  191 attcagggactaaatagatattttgcaaaattcagagacgaatttggccgattttttaaaattcagggacgaatttgaggtattagtctat 281  Q
    ||||| |||||||||||||||||  |||||||    |||||||||||| ||||||| |||||||| ||||||| ||||||||||| |||||    
T  41493931 attcatggactaaatagatatttcacaaaatttgaggacgaatttggctgatttttgaaaattcaaggacgaagttgaggtattactctat 41493841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 14 - 88
Target Start/End: Original strand, 42473507 - 42473581
Alignment:
Q  14 aggaaaaattatactgaaaagttaagtctcgaatttttaccatttccatcaatttagtccttgtacacgtggctg 88  Q
    ||||||||| | ||||||| ||||| | | ||||||| ||||||||||||| |||||||||||||||||||||||    
T  42473507 aggaaaaatgaaactgaaatgttaatttttgaattttgaccatttccatcagtttagtccttgtacacgtggctg 42473581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 17 - 237
Target Start/End: Complemental strand, 19997380 - 19997159
Alignment:
Q  17 aaaaattatactgaaaagttaagtctcgaatttttaccatttccatcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacac 116  Q
    |||||||| | |||||||||||  ||  |||||||| | |||||||||| ||| || ||||||||||||||| || | ||||||||  |||  ||| |||    
T  19997380 aaaaattaaagtgaaaagttaaaactgaaatttttaacgtttccatcaaattattcattgtacacgtggctgactggatgacacgttgacatcacagcac 19997281  T
Q  117 agcatgcaaga-gatacgtcatcaccactaacggaggttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatattttg 215  Q
    | |||||| || || |||||| |  |||||||| |||  ||||||||| |||  | ||||||| | |||||| ||||||||| | ||| | |||||||||    
T  19997280 aacatgcaggacgacacgtcagcctcactaacgaagggattggacggaaggatgaatttgatgaatgtctgttaaattcaggaagtaatttgatattttg 19997181  T
Q  216 caaaattcagagacgaatttgg 237  Q
     ||||||  | |||||||||||    
T  19997180 aaaaatttggggacgaatttgg 19997159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 67 - 203
Target Start/End: Complemental strand, 38597157 - 38597020
Alignment:
Q  67 ttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacacagcatgca-agagatacgtcatcaccactaacggaggttttggacggagg 165  Q
    |||||||||| ||||| |||| |||| ||| |||||||||||||||||||||||||||  | || |  ||| |||  ||||||||    |||||| ||||    
T  38597157 ttagtccttgaacacgcggcttccttcttgccacgtgtacaagacaacacagcatgcagggcgacagatcagcacggctaacggaacacttggacagagg 38597058  T
Q  166 gaccattttgatggacgtctgtaaaattcagggactaa 203  Q
    |||| ||||||||||||||||  ||||| |||||||||    
T  38597057 gacctttttgatggacgtctgacaaattaagggactaa 38597020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 155 - 268
Target Start/End: Original strand, 43318061 - 43318174
Alignment:
Q  155 ttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatattttgcaaaattcagagacgaatttggccgattttttaaaattc 254  Q
    ||||||||||||||| |||| |||||||||||  ||||||||||||||| | ||||||| ||| |||| || || || |||||||||    | |||||||    
T  43318061 ttggacggagggaccttttttatggacgtctgacaaattcagggactaagttgatatttcgcataattgagggatgattttggccgacccataaaaattc 43318160  T
Q  255 agggacgaatttga 268  Q
    | ||||||||||||    
T  43318161 aaggacgaatttga 43318174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 28 - 222
Target Start/End: Complemental strand, 27076071 - 27075876
Alignment:
Q  28 tgaaaagttaagtctcgaatttttaccatttccatcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacacagcatgcaaga 127  Q
    |||||||||||  ||  ||||| || | |||||||||| || |||||| |||||||||||| ||   ||||||||| |||  | | |||| |||||| ||    
T  27076071 tgaaaagttaaaactgaaatttgtaacgtttccatcaaattggtccttatacacgtggctgactaaatgacacgtggacatcaaagcacatcatgcagga 27075972  T
Q  128 -gatacgtcatcaccactaacggaggttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatattttgcaaaatt 222  Q
     || |||||| |  ||||||||| ||  ||| |||||||||  | |||||||||||||||| ||||||||| ||||| | ||||||||| ||||||    
T  27075971 tgacacgtcaacctcactaacggggggattgaacggagggatgaatttgatggacgtctgttaaattcaggaactaatttgatattttgaaaaatt 27075876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 154 - 268
Target Start/End: Original strand, 15459189 - 15459303
Alignment:
Q  154 tttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatattttgcaaaattcagagacgaatttggccgattttttaaaatt 253  Q
    |||||||| ||||||||||||||||||||||||| ||||||||| || ||||||  |||| |  |||||  | ||||| |||| |||||  ||  |||||    
T  15459189 tttggacgaagggaccattttgatggacgtctgttaaattcaggaacaaaatagccatttcgataaattgggggacgattttgtccgatccttgcaaatt 15459288  T
Q  254 cagggacgaatttga 268  Q
    || ||||||||||||    
T  15459289 caaggacgaatttga 15459303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 70 - 243
Target Start/End: Complemental strand, 24496952 - 24496778
Alignment:
Q  70 gtccttgtacacgtggctgccttgttgacacgtgtacaagacaacacagcatgcaaga-gatacgtcatcaccactaacggaggttttggacggagggac 168  Q
    |||||||||||| || || |||||||||||||||||| |||||||| |||||||| || || |  ||| ||  | |||| ||   |||||||||| ||||    
T  24496952 gtccttgtacacatgacttccttgttgacacgtgtacgagacaacatagcatgcaggacgacagatcagcaatagtaacagaacatttggacggatggac 24496853  T
Q  169 cattttgatggacgtctgtaaaattcagggactaaatagatattttgcaaaattcagagacgaatttggccgatt 243  Q
    |||||||||| ||||||   ||||||||||| ||| | |||||||  || |||| || ||| |||||| ||||||    
T  24496852 cattttgatgaacgtctcacaaattcagggattaatttgatatttcacataattgagggacaaatttgaccgatt 24496778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 26 - 88
Target Start/End: Original strand, 29621693 - 29621755
Alignment:
Q  26 actgaaaagttaagtctcgaatttttaccatttccatcaatttagtccttgtacacgtggctg 88  Q
    ||||||| ||||| | ||||||||| || |||||||||| |||||||||||||||||||||||    
T  29621693 actgaaatgttaaatatcgaattttgacaatttccatcagtttagtccttgtacacgtggctg 29621755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 166 - 268
Target Start/End: Complemental strand, 38596980 - 38596878
Alignment:
Q  166 gaccattttgatggacgtctgtaaaattcagggactaaatagatattttgcaaaattcagagacgaatttggccgattttttaaaattcagggacgaatt 265  Q
    |||| |||||||||||||||   ||||||||||||||| | ||||||| ||| |||| || |||||||||||||||    | |||||||| |||||||||    
T  38596980 gacctttttgatggacgtctaacaaattcagggactaagttgatatttcgcataattgagggacgaatttggccgacccataaaaattcaaggacgaatt 38596881  T
Q  266 tga 268  Q
    |||    
T  38596880 tga 38596878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 219 - 280
Target Start/End: Complemental strand, 42471607 - 42471546
Alignment:
Q  219 aattcagagacgaatttggccgattttttaaaattcagggacgaatttgaggtattagtcta 280  Q
    ||||||| |||||| ||||||||||||| |||||||| |||| | |||||||||||||||||    
T  42471607 aattcagggacgaaattggccgatttttcaaaattcaaggactattttgaggtattagtcta 42471546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 143 - 222
Target Start/End: Original strand, 35292371 - 35292450
Alignment:
Q  143 ctaacggaggttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatattttgcaaaatt 222  Q
    |||||||||  |||||||||||| ||| |||| |||||||||||  ||||||||||||||| | ||||||| ||| ||||    
T  35292371 ctaacggagcatttggacggaggaaccttttttatggacgtctgacaaattcagggactaagttgatatttcgcataatt 35292450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 56 - 94
Target Start/End: Complemental strand, 27349369 - 27349331
Alignment:
Q  56 tttccatcaatttagtccttgtacacgtggctgccttgt 94  Q
    |||||||||||||||||||||||||||||||| ||||||    
T  27349369 tttccatcaatttagtccttgtacacgtggcttccttgt 27349331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 153 - 222
Target Start/End: Complemental strand, 27349281 - 27349212
Alignment:
Q  153 ttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatattttgcaaaatt 222  Q
    ||||||||||||||||||||||||| |||||  |  ||||||| |||| |||| ||||||| ||||||||    
T  27349281 ttttggacggagggaccattttgatagacgtgagagaaattcaaggacaaaatcgatatttcgcaaaatt 27349212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 56 - 120
Target Start/End: Original strand, 42620685 - 42620749
Alignment:
Q  56 tttccatcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacacagca 120  Q
    |||||||||||||||||| | |||||||||||  ||| ||  |||||||||||| ||||||||||    
T  42620685 tttccatcaatttagtccctatacacgtggctttctttttcccacgtgtacaagccaacacagca 42620749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 60 - 123
Target Start/End: Original strand, 43317965 - 43318028
Alignment:
Q  60 catcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacacagcatgc 123  Q
    |||||| |||||||||| |||||||||| |||| ||| ||| ||||||||||| |||| |||||    
T  43317965 catcaaattagtccttgaacacgtggcttcctttttgccacatgtacaagacagcacaacatgc 43318028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 60 - 122
Target Start/End: Original strand, 35292287 - 35292349
Alignment:
Q  60 catcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacacagcatg 122  Q
    |||||| |||||||||| |||||| ||| |||| ||| ||||||||||||||| |||| ||||    
T  35292287 catcaaattagtccttgaacacgtagcttcctttttgccacgtgtacaagacagcacaacatg 35292349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 26 - 88
Target Start/End: Complemental strand, 40780762 - 40780700
Alignment:
Q  26 actgaaaagttaagtctcgaatttttaccatttccatcaatttagtccttgtacacgtggctg 88  Q
    ||||||| ||||| | || |||||| || |||||||||| |||||||| ||||||||||||||    
T  40780762 actgaaatgttaaatatcaaattttgacaatttccatcagtttagtccctgtacacgtggctg 40780700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 62 - 122
Target Start/End: Original strand, 32838407 - 32838467
Alignment:
Q  62 tcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacacagcatg 122  Q
    |||| ||| |||||| |||||||||| |||| |||  | ||||||||||||||||||||||    
T  32838407 tcaaattattccttgaacacgtggcttccttcttgctatgtgtacaagacaacacagcatg 32838467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 234; Significance: 1e-129; HSPs: 85)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 234; E-Value: 1e-129
Query Start/End: Original strand, 14 - 279
Target Start/End: Original strand, 53190639 - 53190904
Alignment:
Q  14 aggaaaaattatactgaaaagttaagtctcgaatttttaccatttccatcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaa 113  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  53190639 aggaaaaattatactgaaaagttaagtctcaaatttttaccatttccatcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaa 53190738  T
Q  114 cacagcatgcaagagatacgtcatcaccactaacggaggttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatattt 213  Q
    |||| |||||||| || ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  53190739 cacaacatgcaagggacacgtcatcaccactaacggagcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatattt 53190838  T
Q  214 tgcaaaattcagagacgaatttggccgattttttaaaattcagggacgaatttgaggtattagtct 279  Q
     ||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  53190839 cgcaaaattcagggacgaatttggccgattttttaaaattcaaggacgaatttgaggtattagtct 53190904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 211; E-Value: 1e-115
Query Start/End: Original strand, 16 - 278
Target Start/End: Complemental strand, 54898699 - 54898437
Alignment:
Q  16 gaaaaattatactgaaaagttaagtctcgaatttttaccatttccatcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaaca 115  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  54898699 gaaaaattatactgaaaagttaagtctcgaatttttaccatttccatcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacg 54898600  T
Q  116 cagcatgcaagagatacgtcatcaccactaacggaggttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatattttg 215  Q
    || |||||||| || ||||||||  ||||||||||| |||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||| |    
T  54898599 caacatgcaagggacacgtcatcgtcactaacggagcttttggacggagagaccattttgatgaacgtctgtaaaattcagggactaaatagatatttcg 54898500  T
Q  216 caaaattcagagacgaatttggccgattttttaaaattcagggacgaatttgaggtattagtc 278  Q
    |||||||||| |||||||||| |||||||||||||||||| ||||||||||||||||||||||    
T  54898499 caaaattcagggacgaatttgaccgattttttaaaattcaaggacgaatttgaggtattagtc 54898437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 14 - 278
Target Start/End: Original strand, 2226032 - 2226296
Alignment:
Q  14 aggaaaaattatactgaaaagttaagtctcgaatttttaccatttccatcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaa 113  Q
    ||||||| ||||||| |||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  2226032 aggaaaatttatacttaaaagttaagtctcgaatttgtactatttccatcaatttagtccttgtacacgtggctaccttgttgacacgtgtacaagacaa 2226131  T
Q  114 cacagcatgcaagagatacgtcatcaccactaacggaggttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatattt 213  Q
    ||||||||||||| || ||||||||||||||||| ||| ||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||    
T  2226132 cacagcatgcaagggacacgtcatcaccactaacagagtttttggacggagggaacattttgatgaacgtctgtaaaattcagggactaaatagatattt 2226231  T
Q  214 tgcaaaattcagagacgaatttggccgattttttaaaattcagggacgaatttgaggtattagtc 278  Q
     ||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  2226232 cgcaaaattcagggacgaatttggccgattttttaaaattcaaggacgaatttgaggtattagtc 2226296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 205; E-Value: 1e-112
Query Start/End: Original strand, 14 - 278
Target Start/End: Complemental strand, 41978014 - 41977750
Alignment:
Q  14 aggaaaaattatactgaaaagttaagtctcgaatttttaccatttccatcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaa 113  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  41978014 aggaaaaattatactgaaaagttaagtctcgaatttttaccatttccatcaatttagtccttgtacacgtgactgccttgttgacacgtgtacaagacaa 41977915  T
Q  114 cacagcatgcaagagatacgtcatcaccactaacggaggttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatattt 213  Q
    |||| |||||||| || |||||||||||| ||||| || |||||||||||||||||||||||| |||||||||||||||||||||||||| | |||||||    
T  41977914 cacaacatgcaagggacacgtcatcaccattaacgaagcttttggacggagggaccattttgacggacgtctgtaaaattcagggactaatttgatattt 41977815  T
Q  214 tgcaaaattcagagacgaatttggccgattttttaaaattcagggacgaatttgaggtattagtc 278  Q
     || |||||||| |||| |||||||||||||||||||||||| ||||||||||||||||||||||    
T  41977814 cgccaaattcagggacgtatttggccgattttttaaaattcaaggacgaatttgaggtattagtc 41977750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 14 - 265
Target Start/End: Original strand, 35905592 - 35905843
Alignment:
Q  14 aggaaaaattatactgaaaagttaagtctcgaatttttaccatttccatcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaa 113  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  35905592 aggaaaaattatactgaaaagttaagtctcgaatttttacaatttccatcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaa 35905691  T
Q  114 cacagcatgcaagagatacgtcatcaccactaacggaggttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatattt 213  Q
    | || |||||||| || ||||||||||||||| ||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  35905692 cccatcatgcaagggacacgtcatcaccactaccggagcttttggacggagggaccattttgatgaacgtctgtaaaattcagggactaaatagatattt 35905791  T
Q  214 tgcaaaattcagagacgaatttggccgattttttaaaattcagggacgaatt 265  Q
     ||||||||||| |||||||||| |||||||||||||||||| ||| |||||    
T  35905792 cgcaaaattcagggacgaatttgaccgattttttaaaattcaaggatgaatt 35905843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 198; E-Value: 1e-108
Query Start/End: Original strand, 14 - 278
Target Start/End: Original strand, 27898960 - 27899225
Alignment:
Q  14 aggaaaaattatactgaaaagttaagtctcgaatttttaccatttccatcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaa 113  Q
    ||||||||||| | |||||||| || |||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||| |||||    
T  27898960 aggaaaaattacattgaaaagtcaaatctcgaatttttaccatttccatcaaattagtccttgtacacatggctgccttgttgacacgtgtacatgacaa 27899059  T
Q  114 cacagcatgcaagag-atacgtcatcaccactaacggaggttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatatt 212  Q
    |||| |||||||||| | ||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  27899060 cacaacatgcaagaggacacgtcatcaccactaacggagcttttggacggagggaccatttttatggacgtctgtaaaattcagggactaaatagatatt 27899159  T
Q  213 ttgcaaaattcagagacgaatttggccgattttttaaaattcagggacgaatttgaggtattagtc 278  Q
    | ||||||||||  ||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  27899160 tcgcaaaattcaaggacgaatttggccgattttttaaaattcaaggacgaatttgaggtattagtc 27899225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 15 - 278
Target Start/End: Original strand, 30599798 - 30600062
Alignment:
Q  15 ggaaaaattatactgaaaagttaagtctcgaatttttaccatttccatcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaac 114  Q
    |||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||    
T  30599798 ggaaaaattacactgaaaagttaaatctcgaatttttaccatttccatcaatttagtccttgtacacgtggctgccttattgacatgtgtacaagacaac 30599897  T
Q  115 acagcatgcaagag-atacgtcatcaccactaacggaggttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatattt 213  Q
    |||||||||||||| | || |||||||||||||| ||| ||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||    
T  30599898 acagcatgcaagaggacacatcatcaccactaacagagcttttggacggagggaccattttgatcgacgtctctaaaattcagggactaaatagatattt 30599997  T
Q  214 tgcaaaattcagagacgaatttggccgattttttaaaattcagggacgaatttgaggtattagtc 278  Q
     ||||||||||| ||| |||||||||||||| | |||||| | ||||||||||||||||||||||    
T  30599998 cgcaaaattcagggacaaatttggccgatttgtaaaaatttaaggacgaatttgaggtattagtc 30600062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 182; E-Value: 2e-98
Query Start/End: Original strand, 14 - 278
Target Start/End: Complemental strand, 21348988 - 21348723
Alignment:
Q  14 aggaaaaattatactgaaaagttaagtctcgaatttttaccatttccatcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaa 113  Q
    ||||||||||| |||||||| |||| ||||||||||||||||||| ||||||||||||| ||||||||||||| ||||| |||||||||||||| |||||    
T  21348988 aggaaaaattacactgaaaaattaaatctcgaatttttaccattttcatcaatttagtctttgtacacgtggccgccttattgacacgtgtacatgacaa 21348889  T
Q  114 cacagcatgcaagag-atacgtcatcaccactaacggaggttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatatt 212  Q
    |||| |||||||||| | || | |||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21348888 cacaacatgcaagaggacacattatcaccactaacagagcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatatt 21348789  T
Q  213 ttgcaaaattcagagacgaatttggccgattttttaaaattcagggacgaatttgaggtattagtc 278  Q
    | ||||||||||  ||||||||||||||||||||||||||||| |||| |||||||||||||||||    
T  21348788 tcgcaaaattcaaggacgaatttggccgattttttaaaattcaaggacaaatttgaggtattagtc 21348723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 181; E-Value: 8e-98
Query Start/End: Original strand, 17 - 280
Target Start/End: Complemental strand, 46112749 - 46112485
Alignment:
Q  17 aaaaattatactgaaaagttaagtctcgaatttttaccatttccatcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacac 116  Q
    |||||| | ||||||||||||| ||| ||||||||||||||||||||||||||||| ||||||||||| ||| |||||||||||||||||| ||||||||    
T  46112749 aaaaatgacactgaaaagttaaatcttgaatttttaccatttccatcaatttagtctttgtacacgtgactgacttgttgacacgtgtacatgacaacac 46112650  T
Q  117 agcatgcaagag-atacgtcatcaccactaacggaggttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatattttg 215  Q
    | |||||||||| | |||||||||||||||||  || ||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  46112649 aacatgcaagaggacacgtcatcaccactaacatagcttttgaacggagggaccattttgatggacgtctgtaaaattcatggactaaatagatattttg 46112550  T
Q  216 caaaattcagagacgaatttggccgattttttaaaattcagggacgaatttgaggtattagtcta 280  Q
    |||||||||   |||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  46112549 caaaattcaataacgaatttggccgattttttaaaattcaaggacgaatttgaggtattagtcta 46112485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 180; E-Value: 3e-97
Query Start/End: Original strand, 14 - 280
Target Start/End: Complemental strand, 17515575 - 17515308
Alignment:
Q  14 aggaaaaattatactgaaaagttaagtctcgaatttttaccatttccatcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaa 113  Q
    ||||||||||| ||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||    
T  17515575 aggaaaaattacactgaaaagttaaatctcaaatttttaccatttccatcaatttagtccttgtacacgtggctgccttattgacaagtgtacaagacaa 17515476  T
Q  114 cacagcatgcaagag-atacgtcatcaccactaacggaggttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatatt 212  Q
    |||| ||||||| || | || |||||||||||||||| | |||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  17515475 cacaacatgcaaaaggacacatcatcaccactaacggtgattttggacagagggaccattttgatggacgtttgtaaaattcagggactaaatagatatt 17515376  T
Q  213 ttgcaaaattcagagacgaatttggccgattttttaaaattcagggacgaatttgaggtattagtcta 280  Q
    | ||||||||||| || |||||||||| |||||| |||||||| ||| ||||||||||||||||||||    
T  17515375 tcgcaaaattcagcgatgaatttggccaatttttaaaaattcaaggaagaatttgaggtattagtcta 17515308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 178; E-Value: 5e-96
Query Start/End: Original strand, 14 - 278
Target Start/End: Original strand, 23293049 - 23293314
Alignment:
Q  14 aggaaaaattatactgaaaagttaagtctcgaatttttaccatttccatcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaa 113  Q
    ||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  23293049 aggaaaaattacactgaaaagttaaatctcgaatttttaccatttccatcaatttagtccttgtacacgtggctgccttgttgacacgtgtacatgacaa 23293148  T
Q  114 cacagcatgcaaga-gatacgtcatcaccactaacggaggttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatatt 212  Q
    |||| ||||||||| || || |||||||||||||||||| |||||||||||||||| |||||||||||||| ||||||||||| ||||||||||||||||    
T  23293149 cacaacatgcaagaggacacatcatcaccactaacggagcttttggacggagggactattttgatggacgtttgtaaaattcatggactaaatagatatt 23293248  T
Q  213 ttgcaaaattcagagacgaatttggccgattttttaaaattcagggacgaatttgaggtattagtc 278  Q
    | ||||||||||  | |||||||||| |||||||  ||||||| | || |||||||||||||||||    
T  23293249 tcgcaaaattcaagggcgaatttggctgatttttcgaaattcaagaacaaatttgaggtattagtc 23293314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 171; E-Value: 8e-92
Query Start/End: Original strand, 17 - 278
Target Start/End: Complemental strand, 51684872 - 51684610
Alignment:
Q  17 aaaaattatactgaaaagttaagtctcgaatttttaccatttccatcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacac 116  Q
    |||||| | |||||||||||||  ||  ||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||| ||||||||    
T  51684872 aaaaatgacactgaaaagttaaacctgcaatttttaccatttccatcaaattagtccttgtacacgtgtctgccttgttgacacgtgtacaggacaacac 51684773  T
Q  117 agcatgcaagag-atacgtcatcaccactaacggaggttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatattttg 215  Q
    | || ||||||| | || |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  51684772 aacacgcaagaggacacatcatcaccactaacggagcttttggacggagggaccattttgatggacgtctgtaaaattcaaggactaaatagatattttg 51684673  T
Q  216 caaaattcagagacgaatttggccgattttttaaaattcagggacgaatttgaggtattagtc 278  Q
    |||||||||| || ||||||||| ||||||| |||||||| ||||||||||||| ||||||||    
T  51684672 caaaattcagggatgaatttggctgatttttgaaaattcaaggacgaatttgagatattagtc 51684610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 169; E-Value: 1e-90
Query Start/End: Original strand, 17 - 276
Target Start/End: Complemental strand, 43765399 - 43765139
Alignment:
Q  17 aaaaattatactgaaaagttaagtctcgaatttttaccatttccatcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacac 116  Q
    |||||||| | ||||||||||| |||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||    
T  43765399 aaaaattacattgaaaagttaaatctcgattttttaccatttccatcaatttagtcattgtacacgtggctgccttgttgacacgtgtacatgacaacac 43765300  T
Q  117 agcatgcaagag-atacgtcatcaccactaacggaggttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatattttg 215  Q
    | |||| ||||| | || |||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||  ||||||||||||||| |    
T  43765299 aacatgtaagaggacacatcatcaccactaacggagcttttggatggagggaccattttgatggacgtctgtaaaattcagaaactaaatagatatttcg 43765200  T
Q  216 caaaattcagagacgaatttggccgattttttaaaattcagggacgaatttgaggtattag 276  Q
    |||||||| |  ||||||||| ||||||||| |||||||| ||||||||||||||||||||    
T  43765199 caaaattccggaacgaatttgaccgatttttgaaaattcaaggacgaatttgaggtattag 43765139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 163; E-Value: 5e-87
Query Start/End: Original strand, 14 - 275
Target Start/End: Complemental strand, 2377294 - 2377032
Alignment:
Q  14 aggaaaaattatactgaaaagttaagtctcgaatttttaccatttccatcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaa 113  Q
    ||||||||||| | |||||||| || |||||||||||||||||||||||||| ||||||||  ||||||||||||||||||||||||||||||| |||||    
T  2377294 aggaaaaattacattgaaaagtcaaatctcgaatttttaccatttccatcaaattagtcctattacacgtggctgccttgttgacacgtgtacatgacaa 2377195  T
Q  114 cacagcatgcaagag-atacgtcatcaccactaacggaggttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatatt 212  Q
    |||| |||||||||| | ||||||||||||||||||||| |||| |||||||| |||||||||||||||||||||||||||||| ||||||||| || ||    
T  2377194 cacatcatgcaagaggacacgtcatcaccactaacggagcttttagacggaggaaccattttgatggacgtctgtaaaattcagagactaaatatatttt 2377095  T
Q  213 ttgcaaaattcagagacgaatttggccgattttttaaaattcagggacgaatttgaggtatta 275  Q
    ||||||||||||| ||||||||||| | |||||| ||||||||   |||||||||||||||||    
T  2377094 ttgcaaaattcagggacgaatttggtcaatttttgaaaattcaaaaacgaatttgaggtatta 2377032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 160; E-Value: 3e-85
Query Start/End: Original strand, 45 - 275
Target Start/End: Complemental strand, 42279741 - 42279510
Alignment:
Q  45 aatttttaccatttccatcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacacagcatgcaagag-atacgtcatcaccac 143  Q
    ||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||| ||||||||||| |||||||||| | || ||||||||||    
T  42279741 aatttttaccatttccatcaaattagtccttgtacacgtgtctgccttgttgacacgtgtataagacaacacaacatgcaagaggacacatcatcaccac 42279642  T
Q  144 taacggaggttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatattttgcaaaattcagagacgaatttggccgatt 243  Q
    |||| ||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||  || ||||    
T  42279641 taacagagcttttggacggagggaccattttgatagacgtctgtaaaattcagggactaaatagatattttgcaaaattctgagacgaattgagctgatt 42279542  T
Q  244 ttttaaaattcagggacgaatttgaggtatta 275  Q
    ||| ||||||||  ||||||||||||||||||    
T  42279541 tttgaaaattcaatgacgaatttgaggtatta 42279510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 155; E-Value: 3e-82
Query Start/End: Original strand, 14 - 200
Target Start/End: Original strand, 7884753 - 7884939
Alignment:
Q  14 aggaaaaattatactgaaaagttaagtctcgaatttttaccatttccatcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaa 113  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||    
T  7884753 aggaaaaattatactgaaaagttaagtctcgaatttttaccatttccatcaatttagtccttatacatgtggctgccttgttgacacgtgtacaagacaa 7884852  T
Q  114 cacagcatgcaagagatacgtcatcaccactaacggaggttttggacggagggaccattttgatggacgtctgtaaaattcagggac 200  Q
    |||| |||||||| || | ||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||    
T  7884853 cacaacatgcaagggacatgtcatcaccactaacggaacttttggacggagggaccattttgatggacgtctgtaaaattcagggac 7884939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 151; E-Value: 7e-80
Query Start/End: Original strand, 11 - 248
Target Start/End: Complemental strand, 46197988 - 46197750
Alignment:
Q  11 cataggaaaaattatactgaaaagttaagtctcgaatttttaccatttccatcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaaga 110  Q
    ||||| |||||||| | |||||||||||  ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||  |    
T  46197988 catagaaaaaattacattgaaaagttaaagctcgaatttttaccatttccatcaatttagtccttgtacacgtagctgccttgttgacacgtgcacataa 46197889  T
Q  111 caacacagcatgcaagag-atacgtcatcaccactaacggaggttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagat 209  Q
    ||||||| |||||||||| | || |||||| ||||||||||  ||||||||| |||||||||||| |||||||||||||||||||||| |||||||||||    
T  46197888 caacacaacatgcaagaggaaacatcatcatcactaacggaacttttggacgaagggaccattttaatggacgtctgtaaaattcaggaactaaatagat 46197789  T
Q  210 attttgcaaaattcagagacgaatttggccgatttttta 248  Q
    ||||||||||||||||||||||||||| |||| ||||||    
T  46197788 attttgcaaaattcagagacgaatttgaccgagttttta 46197750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 14 - 204
Target Start/End: Original strand, 44276075 - 44276266
Alignment:
Q  14 aggaaaaattatactgaaaagttaagtctcgaatttttaccatttccatcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaa 113  Q
    ||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||| |    
T  44276075 aggaaaaattacactgaaaagttaaatctcgaatttttaccatttccatcaatttagtccttgtacacgtggctgtcttgttgacacgtgtacatgacga 44276174  T
Q  114 cacagcatgcaaga-gatacgtcatcaccactaacggaggttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaa 204  Q
    |||| |||| |||| || || |||||||||||||| ||| ||||||||||||||||||||||||||| ||||||||||||||| ||||||||    
T  44276175 cacaacatgtaagaggacacatcatcaccactaacagagcttttggacggagggaccattttgatgggcgtctgtaaaattcaaggactaaa 44276266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 126; E-Value: 5e-65
Query Start/End: Original strand, 26 - 278
Target Start/End: Complemental strand, 44794460 - 44794208
Alignment:
Q  26 actgaaaagttaagtctcgaatttttaccatttccatcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacacagcatgcaa 125  Q
    ||||||| ||||| | || |||||| ||||||||||||||||||||||||||||||||||||| |||| ||||||||||||| ||||||| |||||||||    
T  44794460 actgaaatgttaaatatcaaattttgaccatttccatcaatttagtccttgtacacgtggctgacttgctgacacgtgtacaggacaacaaagcatgcaa 44794361  T
Q  126 g-agatacgtcatcaccactaacggaggttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatattttgcaaaattca 224  Q
    | ||  || ||||||| | |||||||  |||||||||||||||| | |||||||||| |||| |||||||||||||||| | ||||||| ||||||||||    
T  44794360 gaagccacatcatcactattaacggaccttttggacggagggacgaatttgatggacttctgcaaaattcagggactaatttgatatttcgcaaaattca 44794261  T
Q  225 gagacgaatttggccgattttttaaaattcagggacgaatttgaggtattagtc 278  Q
    | || ||| |||||||| |||| |||||||| ||||||||||||||||||||||    
T  44794260 gggatgaaattggccga-ttttcaaaattcaaggacgaatttgaggtattagtc 44794208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 124; E-Value: 9e-64
Query Start/End: Original strand, 27 - 278
Target Start/End: Complemental strand, 600961 - 600725
Alignment:
Q  27 ctgaaaagttaagtctcgaatttttaccatttccatcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacacagcatgcaag 126  Q
    |||||||||||| |||| |||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||| ||||||||| ||||||||    
T  600961 ctgaaaagttaaatctcaaatttttaccatttccattaatttagtccttgtacacgtggctgctttgttgacacgtgtacatgacaacacaacatgcaag 600862  T
Q  127 a-gatacgtcatcaccactaacggaggttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatattttgcaaaattcag 225  Q
    | || ||||||||||||||||||||| |||| ||||||||||||||||||||||||                |||||||||||||||||| ||||||||     
T  600861 aggacacgtcatcaccactaacggagcttttagacggagggaccattttgatggac----------------gactaaatagatattttgtaaaattcat 600778  T
Q  226 agacgaatttggccgattttttaaaattcagggacgaatttgaggtattagtc 278  Q
      || ||||||| ||||||||||||||||| ||| ||||||||||||||||||    
T  600777 gaacaaatttggtcgattttttaaaattcaaggatgaatttgaggtattagtc 600725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 17 - 213
Target Start/End: Original strand, 48830688 - 48830885
Alignment:
Q  17 aaaaattatactgaaaagttaagtctcgaatttttaccatttccatcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacac 116  Q
    |||||| ||| |||||||||||  ||  ||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||| ||||||||    
T  48830688 aaaaatgataatgaaaagttaaaactacaatttttaccatttccatcaaattagtccttgtacacgtggttgccttgttgacacgtgtacatgacaacac 48830787  T
Q  117 agcatgcaaga-gatacgtcatcaccactaacggaggttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatattt 213  Q
    | ||||||||| || || |||||||||||||| ||| |||||||||||||||||||||||||||||||| ||||||||||  ||||||||||||||||    
T  48830788 aacatgcaagaggacacatcatcaccactaacagagcttttggacggagggaccattttgatggacgtccgtaaaattcaaagactaaatagatattt 48830885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 42 - 278
Target Start/End: Original strand, 3152125 - 3152362
Alignment:
Q  42 tcgaatttttaccatttccatcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacacagcatgcaaga-gatacgtcatcac 140  Q
    ||||||||| || |||||||||||||||||||||||||||||||||| |||| ||||||||||||| ||||||| |||||| |||| |  || |||||||    
T  3152125 tcgaattttgactatttccatcaatttagtccttgtacacgtggctgacttgctgacacgtgtacatgacaacaaagcatgtaagaagccacatcatcac 3152224  T
Q  141 cactaacggaggttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatattttgcaaaattcagagacgaatttggccg 240  Q
     | |||||||  ||||||||||||||||   |||||||||||||||||||||||||||||||| | ||||||| ||||||||||| || ||| |||||||    
T  3152225 tattaacggaccttttggacggagggacggatttgatggacgtctgtaaaattcagggactaatttgatatttcgcaaaattcagggatgaaattggccg 3152324  T
Q  241 attttttaaaattcagggacgaatttgaggtattagtc 278  Q
    |||||| |||||| | |||  |||||||||||||||||    
T  3152325 atttttcaaaatttaaggataaatttgaggtattagtc 3152362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 26 - 272
Target Start/End: Complemental strand, 2660465 - 2660218
Alignment:
Q  26 actgaaaagttaagtctcgaatttttaccatttccatcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacacagcatgcaa 125  Q
    ||||||| ||||| | || |||||| || |||||||||||||||||||||||||| ||||||| |||| ||||||||||| | ||||||| |||||||||    
T  2660465 actgaaatgttaaatatcaaattttgacaatttccatcaatttagtccttgtacaagtggctgacttgctgacacgtgtagaggacaacaaagcatgcaa 2660366  T
Q  126 ga-gatacgtcatcaccactaacggaggttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatattttgcaaaattca 224  Q
    || |  || |||||   | |||| ||  |||||||||||||||| | |||||||||||||||||||||||| ||||||| | ||||||| ||||||||||    
T  2660365 gaagccacatcatcgttattaacagaccttttggacggagggacgaatttgatggacgtctgtaaaattcaaggactaatttgatatttcgcaaaattca 2660266  T
Q  225 gagacgaatttggccgattttttaaaattcagggacgaatttgaggta 272  Q
    | |||||| |||| |||||||| |||||||| ||||||||||||||||    
T  2660265 gggacgaaattggtcgatttttcaaaattcaaggacgaatttgaggta 2660218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 26 - 232
Target Start/End: Original strand, 19987488 - 19987692
Alignment:
Q  26 actgaaaagttaagtctcgaatttttaccatttccatcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacacagcatgcaa 125  Q
    ||||||| ||||| ||||||||||| ||||||||||||||||||||||||||||||||| ||| |||||||||| ||||||| |   |||||||||||||    
T  19987488 actgaaacgttaaatctcgaattttgaccatttccatcaatttagtccttgtacacgtgactgacttgttgacatgtgtacagg---acacagcatgcaa 19987584  T
Q  126 g-agatacgtcatcaccactaacggaggttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatattttgcaaaattca 224  Q
    | ||  || ||||||| |||||| ||  ||||||||||||||||   |||||||||||| ||||||||| ||||||||| | ||||||| ||||||||||    
T  19987585 gaagccacatcatcactactaacagaccttttggacggagggactgatttgatggacgtgtgtaaaatttagggactaatttgatatttcgcaaaattca 19987684  T
Q  225 gagacgaa 232  Q
    | ||||||    
T  19987685 gggacgaa 19987692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 189 - 279
Target Start/End: Complemental strand, 23291659 - 23291569
Alignment:
Q  189 aaattcagggactaaatagatattttgcaaaattcagagacgaatttggccgattttttaaaattcagggacgaatttgaggtattagtct 279  Q
    |||||||| |||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||| |||||||||| ||||||||||||    
T  23291659 aaattcagagactaaatagatatttcgcaaaattcagggacgaatttggccgattttttaaaattcaaggacgaatttaaggtattagtct 23291569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 189 - 281
Target Start/End: Original strand, 611222 - 611314
Alignment:
Q  189 aaattcagggactaaatagatattttgcaaaattcagagacgaatttggccgattttttaaaattcagggacgaatttgaggtattagtctat 281  Q
    |||||||||| |||||||| ||||| | ||||||||| |||||||||||| |||||||||||||||| |||||||||||||||||||||||||    
T  611222 aaattcaggggctaaatagctatttcgaaaaattcagggacgaatttggctgattttttaaaattcaaggacgaatttgaggtattagtctat 611314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 189 - 277
Target Start/End: Original strand, 2378983 - 2379071
Alignment:
Q  189 aaattcagggactaaatagatattttgcaaaattcagagacgaatttggccgattttttaaaattcagggacgaatttgaggtattagt 277  Q
    ||||||| ||||||||||| ||||||||||||||||| |||||| ||| |||||||||||||||||| |||||||||||||||||||||    
T  2378983 aaattcaaggactaaatagctattttgcaaaattcagggacgaaattgaccgattttttaaaattcaaggacgaatttgaggtattagt 2379071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 61 - 268
Target Start/End: Original strand, 23888678 - 23888886
Alignment:
Q  61 atcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacacagcatgcaaga-gatacgtcatcaccactaacggaggttttgga 159  Q
    ||||| ||||||| || ||| |||||| |||| ||| |||| |||||||||||||||| |||||||  || |  ||| ||   |||||||||| ||||||    
T  23888678 atcaaattagtccctgaacatgtggcttccttcttgccacgcgtacaagacaacacagtatgcaaggcgacagatcagcaaggctaacggaggatttgga 23888777  T
Q  160 cggagggaccattttgatggacgtctgtaaaattcagggactaaatagatattttgcaaaattcagagacgaatttggccgattttttaaaattcaggga 259  Q
    |||||||||| ||||||||||||| ||  |||||||||||||||   ||||||| ||| |||| || |||||| ||||||||  | | ||||||||||||    
T  23888778 cggagggacctttttgatggacgtttgacaaattcagggactaagctgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattcaggga 23888877  T
Q  260 cgaatttga 268  Q
    |||||||||    
T  23888878 cgaatttga 23888886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 189 - 280
Target Start/End: Original strand, 38193510 - 38193601
Alignment:
Q  189 aaattcagggactaaatagatattttgcaaaattcagagacgaatttggccgattttttaaaattcagggacgaatttgaggtattagtcta 280  Q
    ||||||||||||||| | ||||||| ||||||||||| |||||| ||||||||||||| |||||||| ||||||||||||||||||||||||    
T  38193510 aaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccgatttttcaaaattcaaggacgaatttgaggtattagtcta 38193601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 189 - 278
Target Start/End: Original strand, 41979352 - 41979441
Alignment:
Q  189 aaattcagggactaaatagatattttgcaaaattcagagacgaatttggccgattttttaaaattcagggacgaatttgaggtattagtc 278  Q
    ||||||||||||||| | ||||||| ||||||||||| |||||| ||||||||||||| |||||||| ||||||||||||||||||||||    
T  41979352 aaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccgatttttcaaaattcaaggacgaatttgaggtattagtc 41979441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 189 - 278
Target Start/End: Complemental strand, 44268070 - 44267981
Alignment:
Q  189 aaattcagggactaaatagatattttgcaaaattcagagacgaatttggccgattttttaaaattcagggacgaatttgaggtattagtc 278  Q
    ||||||| |||| |||||| ||||| |||||||||||||| ||||||||||||||||| |||||||| ||||||||||||||||||||||    
T  44268070 aaattcaaggacaaaatagctatttcgcaaaattcagagatgaatttggccgatttttgaaaattcaaggacgaatttgaggtattagtc 44267981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 189 - 278
Target Start/End: Complemental strand, 46308896 - 46308807
Alignment:
Q  189 aaattcagggactaaatagatattttgcaaaattcagagacgaatttggccgattttttaaaattcagggacgaatttgaggtattagtc 278  Q
    ||||||||||||||| | ||||||| ||||||||||| |||||| ||||||||||||| |||||||| ||||||||||||||||||||||    
T  46308896 aaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccgatttttcaaaattcaaggacgaatttgaggtattagtc 46308807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 189 - 278
Target Start/End: Original strand, 53094273 - 53094362
Alignment:
Q  189 aaattcagggactaaatagatattttgcaaaattcagagacgaatttggccgattttttaaaattcagggacgaatttgaggtattagtc 278  Q
    ||||||||||||||| | ||||||| ||||||||||| |||||| ||||||||||||| |||||||| ||||||||||||||||||||||    
T  53094273 aaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccgatttttcaaaattcaaggacgaatttgaggtattagtc 53094362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 189 - 281
Target Start/End: Complemental strand, 3150341 - 3150249
Alignment:
Q  189 aaattcagggactaaatagatattttgcaaaattcagagacgaatttggccgattttttaaaattcagggacgaatttgaggtattagtctat 281  Q
    ||||||||||||||| | ||||||| ||||||||||| |||||| ||| ||||||||| |||||||| |||||||||||||||||||||||||    
T  3150341 aaattcagggactaatttgatatttcgcaaaattcagggacgaaattgaccgatttttcaaaattcaaggacgaatttgaggtattagtctat 3150249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 189 - 275
Target Start/End: Original strand, 42282473 - 42282559
Alignment:
Q  189 aaattcagggactaaatagatattttgcaaaattcagagacgaatttggccgattttttaaaattcagggacgaatttgaggtatta 275  Q
    ||||||| ||||||||||||||||| |||||||||||| ||||||||| | ||||||| |||||||| |||||||||||||||||||    
T  42282473 aaattcaaggactaaatagatatttcgcaaaattcagaaacgaatttgactgatttttgaaaattcaaggacgaatttgaggtatta 42282559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 189 - 278
Target Start/End: Original strand, 54900074 - 54900163
Alignment:
Q  189 aaattcagggactaaatagatattttgcaaaattcagagacgaatttggccgattttttaaaattcagggacgaatttgaggtattagtc 278  Q
    |||||||||||| || | ||||||| ||||||||||| |||||| ||||||||||||| |||||||| ||||||||||||||||||||||    
T  54900074 aaattcagggacaaatttgatatttcgcaaaattcagggacgaaattggccgatttttcaaaattcaaggacgaatttgaggtattagtc 54900163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 17 - 268
Target Start/End: Original strand, 31887314 - 31887566
Alignment:
Q  17 aaaaattatactgaaaagttaagtctcgaatttttaccatttccatcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacac 116  Q
    |||||||| |||||||||| ||  || |||||||| |  | |||||||| |||||||||| |||  ||||| |||| ||| |||||||||||||||||||    
T  31887314 aaaaattaaactgaaaagtgaaaactggaatttttccactatccatcaaattagtccttgaacatatggcttcctttttgccacgtgtacaagacaacac 31887413  T
Q  117 agcatgcaa-gagatacgtcatcaccactaacggaggttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatattttg 215  Q
    ||||||||| | || |  ||| ||   |||||||||   ||||||||||||||| ||||||| ||| ||||  ||||||||||||||| | ||||||| |    
T  31887414 agcatgcaaggcgacaaatcagcatggctaacggagcacttggacggagggacctttttgatagacatctgacaaattcagggactaagttgatatttcg 31887513  T
Q  216 caaaattcagagacgaatttggccgattttttaaaattcagggacgaatttga 268  Q
    || |||| |  |  ||||||| |||||   | |||||||| ||||||||||||    
T  31887514 cataattgatggttgaatttgaccgatccgtgaaaattcaaggacgaatttga 31887566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 67 - 268
Target Start/End: Complemental strand, 23774363 - 23774162
Alignment:
Q  67 ttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacacagcatgcaaga-gatacgtcatcaccactaacggaggttttggacggagg 165  Q
    |||||||||| |||||||||| |||| ||| |||||||||||||||||||| |||||| |  || |  ||| ||   ||||| |||   || |||| |||    
T  23774363 ttagtccttgaacacgtggcttccttattgccacgtgtacaagacaacacatcatgcagggcgacagatcaacatggctaacagagcacttagacg-agg 23774265  T
Q  166 gaccattttgatggacgtctgtaaaattcagggactaaatagatattttgcaaaattcagagacgaatttggccgattttttaaaattcagggacgaatt 265  Q
    |||  ||||||||||||||||  ||||||||||||||||| ||||||| ||| |||| || ||||||||||||||| |  | |||||||| |||||||||    
T  23774264 gacttttttgatggacgtctgacaaattcagggactaaattgatatttcgcataattgagggacgaatttggccgactcgtgaaaattcaaggacgaatt 23774165  T
Q  266 tga 268  Q
    |||    
T  23774164 tga 23774162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 189 - 279
Target Start/End: Original strand, 46310436 - 46310526
Alignment:
Q  189 aaattcagggactaaatagatattttgcaaaattcagagacgaatttggccgattttttaaaattcagggacgaatttgaggtattagtct 279  Q
    ||||||||||||||| | ||||||| ||||||||||| |||||| ||| ||||||||| ||||||||  ||||||||||||||||||||||    
T  46310436 aaattcagggactaatttgatatttcgcaaaattcagggacgaaattgaccgatttttcaaaattcaaagacgaatttgaggtattagtct 46310526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 48 - 268
Target Start/End: Original strand, 18430164 - 18430385
Alignment:
Q  48 ttttaccatttccatcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacacagcatgcaaga-gatacgtcatcaccactaa 146  Q
    |||| ||| ||| ||||| |||||||||| |||||||| | |||| ||| ||||||||||||||||||| ||||||| |  || | |||| ||   ||||    
T  18430164 tttttccaattcaatcaaattagtccttgaacacgtggtttccttcttgccacgtgtacaagacaacacggcatgcagggcgacatgtcaccatggctaa 18430263  T
Q  147 cggaggttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatattttgcaaaattcagagacgaatttggccgattttt 246  Q
    |||||   ||||||||||||||| ||||  ||||||||||  | ||||||||||||| | ||||||| ||| |||| || || ||||||||| ||    |    
T  18430264 cggagcacttggacggagggacctttttattggacgtctgacatattcagggactaagttgatatttcgcataattgagggatgaatttggctgacccgt 18430363  T
Q  247 taaaattcagggacgaatttga 268  Q
    ||||||||| ||||||||||||    
T  18430364 taaaattcaaggacgaatttga 18430385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 189 - 278
Target Start/End: Complemental strand, 30598426 - 30598337
Alignment:
Q  189 aaattcagggactaaatagatattttgcaaaattcagagacgaatttggccgattttttaaaattcagggacgaatttgaggtattagtc 278  Q
    ||||||| |||| |||||| ||||| ||||||||||| ||| |||||| ||||||||| |||||||| ||||||||||||||||||||||    
T  30598426 aaattcaaggacaaaatagctatttcgcaaaattcagggacaaatttgaccgatttttgaaaattcaaggacgaatttgaggtattagtc 30598337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 189 - 278
Target Start/End: Complemental strand, 35903914 - 35903825
Alignment:
Q  189 aaattcagggactaaatagatattttgcaaaattcagagacgaatttggccgattttttaaaattcagggacgaatttgaggtattagtc 278  Q
    ||||||||||||||| | ||||||||||||||||||| || ||| ||||| ||||||| |||||||| |||| |||||||||||||||||    
T  35903914 aaattcagggactaatttgatattttgcaaaattcagggatgaaattggctgatttttcaaaattcaaggacaaatttgaggtattagtc 35903825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 189 - 278
Target Start/End: Complemental strand, 38191984 - 38191895
Alignment:
Q  189 aaattcagggactaaatagatattttgcaaaattcagagacgaatttggccgattttttaaaattcagggacgaatttgaggtattagtc 278  Q
    ||||||||||||||| | ||||||| ||||||||||| |||||| |||||| |||||| |||||| | ||||||||||||||||||||||    
T  38191984 aaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccaatttttcaaaatttaaggacgaatttgaggtattagtc 38191895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 189 - 278
Target Start/End: Complemental strand, 53187831 - 53187742
Alignment:
Q  189 aaattcagggactaaatagatattttgcaaaattcagagacgaatttggccgattttttaaaattcagggacgaatttgaggtattagtc 278  Q
    ||||||||||||||| | ||||||| ||||||||||| |||||| ||| ||||||||| |||||||| |||| |||||||||||||||||    
T  53187831 aaattcagggactaatttgatatttcgcaaaattcagggacgaaattgaccgatttttcaaaattcaaggacaaatttgaggtattagtc 53187742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 45 - 195
Target Start/End: Complemental strand, 5126035 - 5125884
Alignment:
Q  45 aatttttaccatttccatcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacacagcatgcaaga-gatacgtcatcaccac 143  Q
    |||||||| | |||||||||| || |||||||||||||||||| | |||| ||||||||||||||||||||   |||||| || || |  ||| || |||    
T  5126035 aatttttagcgtttccatcaaattggtccttgtacacgtggcttctttgtagacacgtgtacaagacaacaggacatgcaggacgacaactcagcagcac 5125936  T
Q  144 taacggaggttttggacggagggaccattttgatggacgtctgtaaaattca 195  Q
    ||||||||  ||||||| || |||| |||||||||||||| ||| |||||||    
T  5125935 taacggagcatttggaccgaaggactattttgatggacgtttgttaaattca 5125884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 48 - 241
Target Start/End: Original strand, 45257113 - 45257307
Alignment:
Q  48 ttttaccatttccatcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacacagcatgca-agagatacgtcatcaccactaa 146  Q
    |||| ||| ||| ||||| |||||||||| |||||||||| | || ||| |||||||||||||||||||| ||||||  | |  | |||| ||  |||||    
T  45257113 tttttccaattcaatcaaattagtccttgaacacgtggcttcattcttgccacgtgtacaagacaacacaacatgcagggcggcatgtcagcatgactaa 45257212  T
Q  147 cggaggttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatattttgcaaaattcagagacgaatttggccga 241  Q
    |||||   ||||||||||||||  |||| |||||||||||  ||||||||| ||||| | |||||||| || |||| || || ||||||||||||    
T  45257213 cggagcacttggacggagggacattttttatggacgtctgacaaattcaggaactaagttgatattttacataattgagggatgaatttggccga 45257307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 189 - 275
Target Start/End: Original strand, 54412547 - 54412633
Alignment:
Q  189 aaattcagggactaaatagatattttgcaaaattcagagacgaatttggccgattttttaaaattcagggacgaatttgaggtatta 275  Q
    ||||||||| ||||||||||||| | ||||||||||  |||||||||| || ||||||||||||||| ||||||||||||| |||||    
T  54412547 aaattcaggaactaaatagatatctcgcaaaattcaaggacgaatttgaccaattttttaaaattcacggacgaatttgagatatta 54412633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 217 - 278
Target Start/End: Original strand, 7884927 - 7884988
Alignment:
Q  217 aaaattcagagacgaatttggccgattttttaaaattcagggacgaatttgaggtattagtc 278  Q
    ||||||||| |||| |||||||||||||||||||||||| ||||||||||||||||||||||    
T  7884927 aaaattcagggacgtatttggccgattttttaaaattcaaggacgaatttgaggtattagtc 7884988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 189 - 278
Target Start/End: Original strand, 44795890 - 44795979
Alignment:
Q  189 aaattcagggactaaatagatattttgcaaaattcagagacgaatttggccgattttttaaaattcagggacgaatttgaggtattagtc 278  Q
    ||||||| ||||||| | ||||||| |||||||||||  ||||| || |||||||||| |||||||| ||||||||||||||||||||||    
T  44795890 aaattcatggactaatttgatatttcgcaaaattcaggaacgaaattagccgatttttcaaaattcaaggacgaatttgaggtattagtc 44795979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 143 - 268
Target Start/End: Original strand, 45898337 - 45898462
Alignment:
Q  143 ctaacggaggttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatattttgcaaaattcagagacgaatttggccgat 242  Q
    ||||||||||  ||||||||||||||| ||||||| ||||||||  ||||||| ||||||| | ||||||| ||| ||||||| ||| || |||| |||     
T  45898337 ctaacggaggacttggacggagggacctttttgatagacgtctgacaaattcaaggactaagttgatatttcgcataattcagggacaaagttggtcgac 45898436  T
Q  243 tttttaaaattcagggacgaatttga 268  Q
     | | |||||||||||||||||||||    
T  45898437 gtgtgaaaattcagggacgaatttga 45898462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 189 - 278
Target Start/End: Complemental strand, 46609238 - 46609149
Alignment:
Q  189 aaattcagggactaaatagatattttgcaaaattcagagacgaatttggccgattttttaaaattcagggacgaatttgaggtattagtc 278  Q
    ||||||||||||||| | |||||||  |||||||||| |||||| ||||||||||||| |||||||| | ||||||||||| ||||||||    
T  46609238 aaattcagggactaatttgatatttcacaaaattcagggacgaaattggccgatttttcaaaattcaagaacgaatttgagatattagtc 46609149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 189 - 278
Target Start/End: Original strand, 46611303 - 46611392
Alignment:
Q  189 aaattcagggactaaatagatattttgcaaaattcagagacgaatttggccgattttttaaaattcagggacgaatttgaggtattagtc 278  Q
    ||||||||||||||| | ||||||| ||||||||||| |||||| ||| |  |||||| |||||||| ||||||||||||||||||||||    
T  46611303 aaattcagggactaatttgatatttcgcaaaattcagggacgaaattgacaaatttttcaaaattcaaggacgaatttgaggtattagtc 46611392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 197 - 278
Target Start/End: Original strand, 51686402 - 51686483
Alignment:
Q  197 ggactaaatagatattttgcaaaattcagagacgaatttggccgattttttaaaattcagggacgaatttgaggtattagtc 278  Q
    |||||||||| |||||| |||||||| || |||||||||||| ||||||| |||||| | ||||||||||||||||||||||    
T  51686402 ggactaaataaatatttcgcaaaatttagggacgaatttggctgatttttgaaaatttaaggacgaatttgaggtattagtc 51686483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 57 - 268
Target Start/End: Original strand, 2977231 - 2977443
Alignment:
Q  57 ttccatcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacacagcatgcaaga-gatacgtcatcaccactaacggaggttt 155  Q
    ||||||||| |||||||||| ||| |||| | |||| ||| ||||||||  |||||||| |||||||| |  || |  ||| || | |||||||||   |    
T  2977231 ttccatcaaattagtccttgaacatgtggtttccttcttgccacgtgtattagacaacatagcatgcagggcgacaaatcagcatcgctaacggagcact 2977330  T
Q  156 tggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatattttgcaaaattcagagacgaatttggccgattttttaaaattca 255  Q
    ||| |||| ||||| ||||||||||||| ||  ||||| ||||||| ||| ||||||| ||| |||| || || ||||||||||||||  | ||||||||    
T  2977331 tgggcggatggacctttttgatggacgtatgacaaatttagggactgaattgatatttcgcataattaagggatgaatttggccgattcgtaaaaattca 2977430  T
Q  256 gggacgaatttga 268  Q
     ||||||||||||    
T  2977431 aggacgaatttga 2977443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 189 - 281
Target Start/End: Original strand, 21350605 - 21350697
Alignment:
Q  189 aaattcagggactaaatagatattttgcaaaattcagagacgaatttggccgattttttaaaattcagggacgaatttgaggtattagtctat 281  Q
    ||||||| |||| |||||| ||||| |||||||||||  ||||||||||||||||||  |||| ||| ||| |||||||||||||||||||||    
T  21350605 aaattcaaggacaaaatagctatttcgcaaaattcagtaacgaatttggccgattttaaaaaaatcacggatgaatttgaggtattagtctat 21350697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 61 - 268
Target Start/End: Complemental strand, 48634099 - 48633887
Alignment:
Q  61 atcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaa----cacagcatgcaaga-gatacgtcatcaccactaacggaggttt 155  Q
    ||||| |||||||||| |||||||||| |||| ||| ||||||||||||||||    |||| |||||| |  || |  ||| ||   |||||||||   |    
T  48634099 atcaaattagtccttgaacacgtggcttcctttttgccacgtgtacaagacaaacaacacatcatgcagggcgacagatcaacatggctaacggagcact 48634000  T
Q  156 tggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatattttgcaaaattcagagacgaatttggccgattttttaaaattca 255  Q
    |||||||||||||| ||||||||||||||||  ||||||||||||||| | ||||||| ||| |||| |  |||||||||| ||||    | ||||||||    
T  48633999 tggacggagggacctttttgatggacgtctgacaaattcagggactaagttgatatttcgcataattgatggacgaatttgaccgacccgtgaaaattca 48633900  T
Q  256 gggacgaatttga 268  Q
     ||||||||||||    
T  48633899 aggacgaatttga 48633887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 45 - 206
Target Start/End: Complemental strand, 5133230 - 5133068
Alignment:
Q  45 aatttttaccatttccatcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacacagcatgcaaga-gatacgtcatcaccac 143  Q
    |||||||| | |||||||||| || ||||| |||| |||| || | |||| ||||||||||||||||||||   |||||| || || |  ||| || |||    
T  5133230 aatttttatcgtttccatcaaattggtcctcgtacgcgtgtcttctttgtagacacgtgtacaagacaacaggacatgcatgacgacagctcagcagcac 5133131  T
Q  144 taacggaggttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaata 206  Q
    ||||||||  |||||||||| |||| |||||||||||||| ||| ||||||| |||| |||||    
T  5133130 taacggagcatttggacggaaggactattttgatggacgtttgttaaattcaaggacaaaata 5133068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 46 - 222
Target Start/End: Original strand, 33852561 - 33852738
Alignment:
Q  46 atttttaccatttccatcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacacagcatgca-agagatacgtcatcaccact 144  Q
    |||||| ||| ||| ||||| |||||||||| |||||||||| |||| ||| ||||| |||||||||||||| ||||||  | || | |||| ||   ||    
T  33852561 attttttccaattcaatcaaattagtccttgaacacgtggcttccttcttgccacgtctacaagacaacacaacatgcagggcgacatgtcaccatggct 33852660  T
Q  145 aacggaggttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatattttgcaaaatt 222  Q
    |||||||   |||||| |||||||| ||||||||||||||||  ||||||||  | ||||| ||||||| ||| ||||    
T  33852661 aacggagcacttggacagagggacctttttgatggacgtctgataaattcagaaattaaattgatatttcgcataatt 33852738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 197 - 278
Target Start/End: Complemental strand, 48829437 - 48829356
Alignment:
Q  197 ggactaaatagatattttgcaaaattcagagacgaatttggccgattttttaaaattcagggacgaatttgaggtattagtc 278  Q
    ||||||||||||||||| |||||||||||  |  |||||||| || |||| |||||||| ||||||||||||||||||||||    
T  48829437 ggactaaatagatatttcgcaaaattcaggaataaatttggctgaattttgaaaattcaaggacgaatttgaggtattagtc 48829356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 189 - 278
Target Start/End: Complemental strand, 53092712 - 53092623
Alignment:
Q  189 aaattcagggactaaatagatattttgcaaaattcagagacgaatttggccgattttttaaaattcagggacgaatttgaggtattagtc 278  Q
    ||||||||||| ||| | ||||||| ||||||||||| |||||| |||||| |||||| |||||| |  |||||||||||||||||||||    
T  53092712 aaattcagggattaatttgatatttcgcaaaattcagggacgaaattggccaatttttcaaaatttaaagacgaatttgaggtattagtc 53092623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 189 - 273
Target Start/End: Original strand, 2661908 - 2661992
Alignment:
Q  189 aaattcagggactaaatagatattttgcaaaattcagagacgaatttggccgattttttaaaattcagggacgaatttgaggtat 273  Q
    ||||||| ||||||| | ||||||| ||||||||||  |||||| |||| |||||||| |||||||| |||||||||||||||||    
T  2661908 aaattcatggactaatttgatatttcgcaaaattcacggacgaaattggtcgatttttcaaaattcaaggacgaatttgaggtat 2661992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 189 - 278
Target Start/End: Original strand, 46114105 - 46114195
Alignment:
Q  189 aaattcagggactaaatagatattttgcaaaattcagagacgaatttggccga-ttttttaaaattcagggacgaatttgaggtattagtc 278  Q
    |||||||  |||||||||||||||| ||||||||||  ||| ||||||||||| |||||||||||||| |||  ||||||||||| |||||    
T  46114105 aaattcaatgactaaatagatatttcgcaaaattcaaggacaaatttggccgatttttttaaaattcaaggataaatttgaggtagtagtc 46114195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 189 - 278
Target Start/End: Complemental strand, 7883417 - 7883328
Alignment:
Q  189 aaattcagggactaaatagatattttgcaaaattcagagacgaatttggccgattttttaaaattcagggacgaatttgaggtattagtc 278  Q
    ||||||||| ||||| | |||||||  ||||||| || |||||| ||||||||||||| ||||||||  |||||| ||||||||||||||    
T  7883417 aaattcaggaactaatttgatatttcacaaaatttagggacgaaattggccgatttttcaaaattcaaagacgaaattgaggtattagtc 7883328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 155 - 268
Target Start/End: Original strand, 40508912 - 40509025
Alignment:
Q  155 ttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatattttgcaaaattcagagacgaatttggccgattttttaaaattc 254  Q
    ||||||||||||||  ||||||||||||||||  ||||||| ||| ||| | ||||||| ||| |||| || |||||||||||||||    | |||||||    
T  40508912 ttggacggagggacatttttgatggacgtctgacaaattcaaggattaagttgatatttcgcataattgagggacgaatttggccgacccgtgaaaattc 40509011  T
Q  255 agggacgaatttga 268  Q
    | ||||||||||||    
T  40509012 aaggacgaatttga 40509025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 159 - 268
Target Start/End: Original strand, 41021008 - 41021117
Alignment:
Q  159 acggagggaccattttgatggacgtctgtaaaattcagggactaaatagatattttgcaaaattcagagacgaatttggccgattttttaaaattcaggg 258  Q
    ||||||||||| ||||||||||||||||  |||||||||||  |||| || |||| ||| |||| || ||| |||||||||||    | |||||||||||    
T  41021008 acggagggacctttttgatggacgtctgacaaattcagggatgaaattgaaatttcgcataattgagggactaatttggccgacgcgtgaaaattcaggg 41021107  T
Q  259 acgaatttga 268  Q
    ||||||||||    
T  41021108 acgaatttga 41021117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 56 - 195
Target Start/End: Complemental strand, 41623875 - 41623735
Alignment:
Q  56 tttccatcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacacagcatgca-agagatacgtcatcaccactaacggaggtt 154  Q
    |||||||||| || |||||||||||||||||| |||||| ||||||| ||||||||||||   |||||| |  || |  |||  | |||||||||||  |    
T  41623875 tttccatcaaattggtccttgtacacgtggcttccttgtagacacgtatacaagacaacaagacatgcagaacgacagctcagtagcactaacggagcat 41623776  T
Q  155 ttggacggagggaccattttgatggacgtctgtaaaattca 195  Q
    ||| ||||| |||| |||||||||||||| ||| |||||||    
T  41623775 ttgaacggaaggactattttgatggacgtttgttaaattca 41623735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 45 - 122
Target Start/End: Original strand, 26449181 - 26449258
Alignment:
Q  45 aatttttaccatttccatcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacacagcatg 122  Q
    |||||| | |||||||||||| || |||||||| || |||||| ||||||| |||||| |||||||||||||| ||||    
T  26449181 aattttcatcatttccatcaaattggtccttgtccatgtggcttccttgttaacacgtatacaagacaacacaacatg 26449258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 189 - 278
Target Start/End: Complemental strand, 28626500 - 28626411
Alignment:
Q  189 aaattcagggactaaatagatattttgcaaaattcagagacgaatttggccgattttttaaaattcagggacgaatttgaggtattagtc 278  Q
    ||||||||||||||  | ||||||| | | ||||||| |||||| ||| ||||||||| |||||||| |||| | |||||||||||||||    
T  28626500 aaattcagggactattttgatatttcgaataattcagggacgaaattgaccgatttttcaaaattcaaggactattttgaggtattagtc 28626411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 48 - 112
Target Start/End: Original strand, 33113074 - 33113138
Alignment:
Q  48 ttttaccatttccatcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagaca 112  Q
    |||| ||| ||||||||| |||||||||| |||||||||| |||| ||| |||||||||||||||    
T  33113074 tttttccacttccatcaaattagtccttgaacacgtggcttcctttttgccacgtgtacaagaca 33113138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 56 - 120
Target Start/End: Complemental strand, 41944776 - 41944712
Alignment:
Q  56 tttccatcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacacagca 120  Q
    |||||||||||||||||| |||||||| |||| |||| ||  |||||||||||| ||||||||||    
T  41944776 tttccatcaatttagtccctgtacacgcggcttcctttttcccacgtgtacaagccaacacagca 41944712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 155 - 222
Target Start/End: Complemental strand, 1845907 - 1845840
Alignment:
Q  155 ttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatattttgcaaaatt 222  Q
    ||||||||||||||  ||||||||||||||||| |||||||  |||||| | ||||||||||| ||||    
T  1845907 ttggacggagggacgtttttgatggacgtctgtcaaattcaaagactaagttgatattttgcataatt 1845840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 189 - 268
Target Start/End: Original strand, 17516973 - 17517052
Alignment:
Q  189 aaattcagggactaaatagatattttgcaaaattcagagacgaatttggccgattttttaaaattcagggacgaatttga 268  Q
    ||||||| |||| |||||  ||||| ||||||||||   ||||||||| ||||||||| |||||||| ||||||||||||    
T  17516973 aaattcaaggacaaaataactatttcgcaaaattcatgaacgaatttgaccgatttttgaaaattcaaggacgaatttga 17517052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 158 - 241
Target Start/End: Original strand, 33113184 - 33113267
Alignment:
Q  158 gacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatattttgcaaaattcagagacgaatttggccga 241  Q
    |||||||||||| ||||||||||||||||  ||||| ||||||||| | ||||||| ||| |||| || || || |||||||||    
T  33113184 gacggagggacctttttgatggacgtctgacaaatttagggactaagttgatatttcgcataattgagggatgattttggccga 33113267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 48 - 213
Target Start/End: Original strand, 24382786 - 24382952
Alignment:
Q  48 ttttaccatttccatcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacacagcatgcaaga-gatacgtcatcaccactaa 146  Q
    |||| ||| ||| ||||| |||||||||| |||||||||| |||| ||| | ||| || ||||||||||| |||||| |  || |  ||| ||   ||||    
T  24382786 tttttccaattcaatcaaattagtccttgaacacgtggcttcctttttgccccgtatataagacaacacaacatgcagggcgacatatcagcatggctaa 24382885  T
Q  147 cggaggttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatattt 213  Q
    |||| |  ||||||||||||||| ||||||||||||||||  |||| || ||||||| | |||||||    
T  24382886 cggatgacttggacggagggacctttttgatggacgtctgacaaatccatggactaagttgatattt 24382952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 189 - 278
Target Start/End: Complemental strand, 27897239 - 27897151
Alignment:
Q  189 aaattcagggactaaatagatattttgcaaaattcagagacgaatttggccgattttttaaaattcagggacgaatttgaggtattagtc 278  Q
    |||||||| |||||||||| || || ||||||||||  ||||||||||  | ||||||||||||| | | | ||||||||||||||||||    
T  27897239 aaattcagagactaaatagctaatt-gcaaaattcatggacgaatttgatccattttttaaaatttaagaaagaatttgaggtattagtc 27897151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 190 - 275
Target Start/End: Original strand, 35572525 - 35572610
Alignment:
Q  190 aattcagggactaaatagatattttgcaaaattcagagacgaatttggccgattttttaaaattcagggacgaatttgaggtatta 275  Q
    |||||| ||||||||||| |||||| ||||||||||  || |||||   | ||||||||||||||| |||||||||| | ||||||    
T  35572525 aattcaaggactaaatagctatttttcaaaattcaggaacaaatttaatcaattttttaaaattcaaggacgaatttaaagtatta 35572610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 141 - 213
Target Start/End: Original strand, 23876965 - 23877037
Alignment:
Q  141 cactaacggaggttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatattt 213  Q
    ||||||||||||  |||||||||||||  | |||||||||||| ||| |||||||| |||||| | |||||||    
T  23876965 cactaacggagggattggacggagggatgaatttgatggacgtttgttaaattcagagactaatttgatattt 23877037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 56 - 203
Target Start/End: Original strand, 25535150 - 25535298
Alignment:
Q  56 tttccatcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacacagcatgcaaga-gatacgtcatcaccactaacggaggtt 154  Q
    |||||||||| || ||||||||| ||||||| | || | ||||||||| |||  |||||| |||||| | || || |||||| |    |||| |||||      
T  25535150 tttccatcaaattggtccttgtagacgtggccgactggatgacacgtggacatcacaacaaagcatgtaggacgacacgtcagccttgctaatggagggg 25535249  T
Q  155 ttggacggagggaccattttgatggacgtctgtaaaattcagggactaa 203  Q
    |||||||||||||  | |||| ||||||||||| |||||||||||||||    
T  25535250 ttggacggagggatgaatttggtggacgtctgttaaattcagggactaa 25535298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 74 - 200
Target Start/End: Complemental strand, 54092892 - 54092764
Alignment:
Q  74 ttgtacacgtggctg-ccttgttgacacgtgtacaagacaacacagcatgcaaga-gatacgtcatcaccactaacggaggttttggacggagggaccat 171  Q
    ||||||||||||||  |||||||||||||||||||||||||||   |||||  || || |  ||  || | ||||| |||  |||||||||| |||| ||    
T  54092892 ttgtacacgtggctttccttgttgacacgtgtacaagacaacaggacatgctggatgagagctcggcagctctaacagagcatttggacggaaggactat 54092793  T
Q  172 tttgatggacgtctgtaaaattcagggac 200  Q
    |||||||||||| ||| ||||||||||||    
T  54092792 tttgatggacgtttgttaaattcagggac 54092764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 189 - 268
Target Start/End: Original strand, 48635375 - 48635454
Alignment:
Q  189 aaattcagggactaaatagatattttgcaaaattcagagacgaatttggccgattttttaaaattcagggacgaatttga 268  Q
    ||||||||||| ||||| ||||||| ||| |||| || |||||||||| |||||   | |||||||||||||||| ||||    
T  48635375 aaattcagggattaaattgatatttcgcataattaagggacgaatttgaccgatccgtgaaaattcagggacgaaattga 48635454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 61 - 115
Target Start/End: Complemental strand, 17238300 - 17238246
Alignment:
Q  61 atcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaaca 115  Q
    ||||| || ||||||||||||||| || |||||||||||| |||||||| |||||    
T  17238300 atcaaattggtccttgtacacgtgacttccttgttgacacctgtacaaggcaaca 17238246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #82
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 248 - 281
Target Start/End: Original strand, 43767075 - 43767108
Alignment:
Q  248 aaaattcagggacgaatttgaggtattagtctat 281  Q
    |||||||||||| |||||||||||||||||||||    
T  43767075 aaaattcagggatgaatttgaggtattagtctat 43767108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #83
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 67 - 124
Target Start/End: Original strand, 51454158 - 51454215
Alignment:
Q  67 ttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacacagcatgca 124  Q
    |||||||||| |||||||||  |||| ||| |||||||| ||||||||||| ||||||    
T  51454158 ttagtccttgaacacgtggcctccttcttgccacgtgtataagacaacacatcatgca 51454215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #84
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 189 - 241
Target Start/End: Original strand, 1847647 - 1847699
Alignment:
Q  189 aaattcagggactaaatagatattttgcaaaattcagagacgaatttggccga 241  Q
    ||||||||||| ||||| ||||||||||| |||| || || ||||||||||||    
T  1847647 aaattcagggattaaattgatattttgcataattgagggatgaatttggccga 1847699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #85
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 189 - 237
Target Start/End: Original strand, 33051467 - 33051515
Alignment:
Q  189 aaattcagggactaaatagatattttgcaaaattcagagacgaatttgg 237  Q
    |||||||||||| |||| |||||||||||||||| || ||||| |||||    
T  33051467 aaattcagggacgaaattgatattttgcaaaatttagggacgattttgg 33051515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 229; Significance: 1e-126; HSPs: 72)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 229; E-Value: 1e-126
Query Start/End: Original strand, 14 - 278
Target Start/End: Original strand, 8609667 - 8609931
Alignment:
Q  14 aggaaaaattatactgaaaagttaagtctcgaatttttaccatttccatcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaa 113  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  8609667 aggaaaaattataatgaaaagttaagtctcgaatttttaccatttccatcaatttagtccttgtacacgtggctgccttgtcgacacgtgtacaagacaa 8609766  T
Q  114 cacagcatgcaagagatacgtcatcaccactaacggaggttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatattt 213  Q
    ||||||||||||| || ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8609767 cacagcatgcaagggacacgtcatcaccactaacggagcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatattt 8609866  T
Q  214 tgcaaaattcagagacgaatttggccgattttttaaaattcagggacgaatttgaggtattagtc 278  Q
     ||||||||||| ||||||||||||||||||||||||||||| | ||||||||||||||||||||    
T  8609867 cgcaaaattcagggacgaatttggccgattttttaaaattcaagaacgaatttgaggtattagtc 8609931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 14 - 278
Target Start/End: Original strand, 13108216 - 13108480
Alignment:
Q  14 aggaaaaattatactgaaaagttaagtctcgaatttttaccatttccatcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaa 113  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13108216 aggaaaaattatactgaaaagttaagtctcgaatttttaccatttccatcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaa 13108315  T
Q  114 cacagcatgcaagagatacgtcatcaccactaacggaggttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatattt 213  Q
    ||||||||||||| || |||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||    
T  13108316 cacagcatgcaagggacacgtcatcaccactaacgaagcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaatttgatattt 13108415  T
Q  214 tgcaaaattcagagacgaatttggccgattttttaaaattcagggacgaatttgaggtattagtc 278  Q
     ||||||||||| |||| |||| ||||||||||||||||||| ||||||||||||| ||||||||    
T  13108416 cgcaaaattcagggacgtatttagccgattttttaaaattcaaggacgaatttgagttattagtc 13108480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 208; E-Value: 1e-114
Query Start/End: Original strand, 15 - 278
Target Start/End: Complemental strand, 38547491 - 38547228
Alignment:
Q  15 ggaaaaattatactgaaaagttaagtctcgaatttttaccatttccatcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaac 114  Q
    |||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38547491 ggaaaaattatactgaaaagttaagtatcgaatttttatcatttccatcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaac 38547392  T
Q  115 acagcatgcaagagatacgtcatcaccactaacggaggttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatatttt 214  Q
    |||||||||||| || ||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||| | |||||||     
T  38547391 acagcatgcaagggacacgtcatcaccactaacggagcttttggatggagggaccattttgatggacgtctgtaaaattcagggactaatttgatatttc 38547292  T
Q  215 gcaaaattcagagacgaatttggccgattttttaaaattcagggacgaatttgaggtattagtc 278  Q
    ||||||||||  |||| |||||||||||||||||||||||| ||||||| ||||||||||||||    
T  38547291 gcaaaattcatggacgtatttggccgattttttaaaattcaaggacgaacttgaggtattagtc 38547228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 186; E-Value: 1e-101
Query Start/End: Original strand, 11 - 275
Target Start/End: Complemental strand, 42942042 - 42941777
Alignment:
Q  11 cataggaaaaattatactgaaaagttaagtctcgaatttttaccatttccatcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaaga 110  Q
    |||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||  ||    
T  42942042 cataggaaaaattacactgaaaagttaaatctcgaatttttaccatttccatcaatttagtccttgtacatgtggctgccttgttgacacgtgtacctga 42941943  T
Q  111 caacacagcatgcaagag-atacgtcatcaccactaacggaggttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagat 209  Q
    ||||||| |||||||||| | || ||||| |||||||||||| |||||||||||||||| |||||||||||| |||||||||||||||||||||||| ||    
T  42941942 caacacaacatgcaagaggacacatcatctccactaacggagattttggacggagggactattttgatggacatctgtaaaattcagggactaaataaat 42941843  T
Q  210 attttgcaaaattcagagacgaatttggccgattttttaaaattcagggacgaatttgaggtatta 275  Q
    ||||  |||||||||| |||||||||||| |||||||||||||||| |||||||||||||||||||    
T  42941842 atttctcaaaattcagggacgaatttggctgattttttaaaattcaaggacgaatttgaggtatta 42941777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 178; E-Value: 5e-96
Query Start/End: Original strand, 14 - 278
Target Start/End: Original strand, 41042463 - 41042728
Alignment:
Q  14 aggaaaaattatactgaaaagttaagtctcgaatttttaccatttccatcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaa 113  Q
    ||||||||||| ||||||||||||| ||| |||||||||| ||||||||||||||||||||||||| |||||||||||||||||||| ||| || |||||    
T  41042463 aggaaaaattacactgaaaagttaaatcttgaatttttacaatttccatcaatttagtccttgtacccgtggctgccttgttgacacatgtgcaggacaa 41042562  T
Q  114 cacagcatgcaagag-atacgtcatcaccactaacggaggttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatatt 212  Q
    ||||||||||||||| | || |||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  41042563 cacagcatgcaagaggacacatcatcaccactaacggagcttttggacggagggaccattttgatggacgcctgtaaaattcagggactaaatagatatt 41042662  T
Q  213 ttgcaaaattcagagacgaatttggccgattttttaaaattcagggacgaatttgaggtattagtc 278  Q
    |  |||||||||| ||| ||||||||| ||||||||||||||| ||||| |||| |||||||||||    
T  41042663 tcacaaaattcagggacaaatttggccaattttttaaaattcaaggacggatttaaggtattagtc 41042728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 174; E-Value: 1e-93
Query Start/End: Original strand, 14 - 278
Target Start/End: Original strand, 13485978 - 13486243
Alignment:
Q  14 aggaaaaattatactgaaaagttaagtctcgaatttttaccatttccatcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaa 113  Q
    ||||||||||| | ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| | |||    
T  13485978 aggaaaaattacattgaaaagttaaatctcgaatttttaccatttccatcaatttagtccttgtacacgtgactgccttgttgacacgtgtacagggcaa 13486077  T
Q  114 cacagcatgcaagag-atacgtcatcaccactaacggaggttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatatt 212  Q
    |||| |||||||||| | || ||||||| ||||| |||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13486078 cacaacatgcaagaggacacatcatcactactaatggagcttttggacagagggaccattttgatggacgtctgtaaaattcagggactaaatagatatt 13486177  T
Q  213 ttgcaaaattcagagacgaatttggccgattttttaaaattcagggacgaatttgaggtattagtc 278  Q
    | ||||||| ||||||||||| || ||||||||| |||||||| | || |||||||||||||||||    
T  13486178 tcgcaaaatccagagacgaatctgaccgatttttaaaaattcaagcacaaatttgaggtattagtc 13486243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 172; E-Value: 2e-92
Query Start/End: Original strand, 14 - 277
Target Start/End: Complemental strand, 5036714 - 5036446
Alignment:
Q  14 aggaaaaattatactgaaaagttaagtctcgaatttttaccatttccatcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaa 113  Q
    ||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5036714 aggaaaaattacactgaaaagttaaatctcgaatttttaccatttccatcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaa 5036615  T
Q  114 cacagcatgcaaga-gatacgtcatcaccactaacggaggt----tttggacggagggaccattttgatggacgtctgtaaaattcagggactaaataga 208  Q
    |||| ||||||||| || || |||||| ||||||| ||| |    ||||||||||| |||||||||||| ||||||||||||||||| ||||||||||||    
T  5036614 cacaacatgcaagaggacacatcatcatcactaacagagctttaatttggacggagagaccattttgatagacgtctgtaaaattcaaggactaaataga 5036515  T
Q  209 tattttgcaaaattcagagacgaatttggccgattttttaaaattcagggacgaatttgaggtattagt 277  Q
    |||||  |||||||||| |||||||||| | |||||||||||||| | |||||||||||||||||||||    
T  5036514 tatttcacaaaattcagggacgaatttgacggattttttaaaatttaaggacgaatttgaggtattagt 5036446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 161; E-Value: 7e-86
Query Start/End: Original strand, 17 - 280
Target Start/End: Original strand, 7744994 - 7745258
Alignment:
Q  17 aaaaattatactgaaaagttaagtctcgaatttttaccatttccatcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacac 116  Q
    |||||| | |||||||||||||  ||  ||||||||||||||||||||| ||||||||||||||  || |||||||||||||||||||||||||||||||    
T  7744994 aaaaatgacactgaaaagttaacactgtaatttttaccatttccatcaaattagtccttgtacatatgactgccttgttgacacgtgtacaagacaacac 7745093  T
Q  117 agcatgcaagag-atacgtcatcaccactaacggaggttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatattttg 215  Q
    | |||||||||| | || |||||||||||||||||| ||||||| |||||||||||||||||||| ||||||||||| ||||||||||||| |||||| |    
T  7745094 atcatgcaagaggacacatcatcaccactaacggagcttttggatggagggaccattttgatggatgtctgtaaaatacagggactaaataaatatttcg 7745193  T
Q  216 caaaattcagagacgaatttggccgattttttaaaattcagggacgaatttgaggtattagtcta 280  Q
    ||||||||||||||||||||||| ||||||| ||||||||  |||||||||||| ||||||||||    
T  7745194 caaaattcagagacgaatttggctgatttttgaaaattcaaagacgaatttgagatattagtcta 7745258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 152; E-Value: 2e-80
Query Start/End: Original strand, 17 - 235
Target Start/End: Original strand, 9673047 - 9673266
Alignment:
Q  17 aaaaattatactgaaaagttaagtctcgaatttttaccatttccatcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacac 116  Q
    |||||| | ||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  9673047 aaaaatgacactgaaaagttaaatctcgaatttttaccatttccatcaaattagtccttgtacacgtggctgccttgttgacacgtgtacatgacaacac 9673146  T
Q  117 agcatgcaag-agatacgtcatcaccactaacggaggttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatattttg 215  Q
    | |||||||| ||| || ||||||||||||||| || |||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||      
T  9673147 aacatgcaagaagacacatcatcaccactaacgaagcttttagacggagggaccattttgatggacgtctgtaaaattcagggattaaatagatatttca 9673246  T
Q  216 caaaattcagagacgaattt 235  Q
    |||||||||| |||||||||    
T  9673247 caaaattcagggacgaattt 9673266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 152; E-Value: 2e-80
Query Start/End: Original strand, 36 - 279
Target Start/End: Complemental strand, 13282707 - 13282477
Alignment:
Q  36 taagtctcgaatttttaccatttccatcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacacagcatgcaagagatacgtc 135  Q
    |||||||||||||||||||||||||||||||||||||||||||              || | |||||||||||||||||| |||||||||| || || ||    
T  13282707 taagtctcgaatttttaccatttccatcaatttagtccttgtag-------------gtagccacgtgtacaagacaacagagcatgcaagggacacatc 13282621  T
Q  136 atcaccactaacggaggttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatattttgcaaaattcagagacgaattt 235  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||| |||||||||    
T  13282620 atcaccactaacggagcttttggacggagggaccattttgatggacgtttgtaaaattcagggactaaatagatatttcgcaaaattcagggacgaattt 13282521  T
Q  236 ggccgattttttaaaattcagggacgaatttgaggtattagtct 279  Q
    |||||||||||||||||||| |||||||||||||||||||||||    
T  13282520 ggccgattttttaaaattcaaggacgaatttgaggtattagtct 13282477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 149; E-Value: 1e-78
Query Start/End: Original strand, 28 - 275
Target Start/End: Original strand, 26242207 - 26242455
Alignment:
Q  28 tgaaaagttaagtctcgaatttttaccatttccatcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacacagcatgcaaga 127  Q
    |||||||||||  ||  ||||||||||||||||||||| |||||  |||||||| ||| ||||||||||||||||||||||||||||||| |||||||||    
T  26242207 tgaaaagttaacactataatttttaccatttccatcaaattagttattgtacacatggttgccttgttgacacgtgtacaagacaacacaacatgcaaga 26242306  T
Q  128 g-atacgtcatcaccactaacggaggttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatattttgcaaaattcaga 226  Q
    | | || ||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||| ||     
T  26242307 ggacacatcatcgccactaacggagcttttggacggagggaccattttgatggacgtctgtaaaattcagagactaaatagatatttcgcaaaatttagg 26242406  T
Q  227 gacgaatttggccgattttttaaaattcagggacgaatttgaggtatta 275  Q
    |||||||||||| ||||||| |||||||| | ||||| |||||||||||    
T  26242407 gacgaatttggctgatttttgaaaattcaagaacgaaattgaggtatta 26242455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 146; E-Value: 6e-77
Query Start/End: Original strand, 14 - 278
Target Start/End: Complemental strand, 27691419 - 27691154
Alignment:
Q  14 aggaaaaattatactgaaaagttaagtctcgaatttttaccatttccatcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaa 113  Q
    ||||||||  ||||||||| ||||| | ||||||||| ||||||||||||||||||||||||||||||||||||| |||| ||||||||||||| |||||    
T  27691419 aggaaaaaagatactgaaatgttaaatatcgaattttgaccatttccatcaatttagtccttgtacacgtggctgacttgctgacacgtgtacaggacaa 27691320  T
Q  114 cacagcatgcaaga-gatacgtcatcaccactaacggaggttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatatt 212  Q
    || ||||||||||| |  || ||||||| | | |||||  ||||||||||||||||   |||||||||||||||||||||||||||||||| | ||||||    
T  27691319 caaagcatgcaagaagccacatcatcactattgacggaccttttggacggagggacggatttgatggacgtctgtaaaattcagggactaatttgatatt 27691220  T
Q  213 ttgcaaaattcagagacgaatttggccgattttttaaaattcagggacgaatttgaggtattagtc 278  Q
    | ||||||||||| |||||| ||||||||||||| |||||||| ||||||||||||||||||||||    
T  27691219 tcgcaaaattcagggacgaaattggccgatttttcaaaattcaaggacgaatttgaggtattagtc 27691154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 45 - 275
Target Start/End: Original strand, 41825554 - 41825785
Alignment:
Q  45 aatttttaccatttccatcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacacagcatgcaaga-gatacgtcatcaccac 143  Q
    ||||||||||||||| ||||| |||||||||||||||||| |||||||||||||| ||||||| ||||||||||||||||||| || || ||||||| ||    
T  41825554 aatttttaccatttctatcaaattagtccttgtacacgtgactgccttgttgacatgtgtacaggacaacacagcatgcaagaagacacatcatcactac 41825653  T
Q  144 taacggaggttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatattttgcaaaattcagagacgaatttggccgatt 243  Q
    |||| ||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||  |||||||||    ||||    
T  41825654 taacagagcttttggacggagtgaccattttgatggacgtctgtaaaattcagggactaaatagatatttcgcaaaattcaaggacgaatttatttgatt 41825753  T
Q  244 ttttaaaattcagggacgaatttgaggtatta 275  Q
    ||| |||||||| |||||||||||||||||||    
T  41825754 tttgaaaattcaaggacgaatttgaggtatta 41825785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 134; E-Value: 9e-70
Query Start/End: Original strand, 18 - 226
Target Start/End: Original strand, 40339563 - 40339772
Alignment:
Q  18 aaaattatactgaaaagttaagtctcgaatttttaccatttccatcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacaca 117  Q
    ||||||| ||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||| |||||||||    
T  40339563 aaaattacactgaaaagttaaatctcgaatttttaccatttccatccatttagtccttgtacacgtggctgccttgttgacaggtgtacatgacaacaca 40339662  T
Q  118 gcatgcaaga-gatacgtcatcaccactaacggaggttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatattttgc 216  Q
     ||||||| | ||||| ||||||| |||||||||| ||||||| | ||||||||||||||||||| ||||||||||||| |||||||||||||||||  |    
T  40339663 acatgcaaaaggatacatcatcactactaacggagcttttggatgaagggaccattttgatggacatctgtaaaattcatggactaaatagatatttcac 40339762  T
Q  217 aaaattcaga 226  Q
    | ||||||||    
T  40339763 ataattcaga 40339772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 131; E-Value: 6e-68
Query Start/End: Original strand, 68 - 278
Target Start/End: Complemental strand, 22272547 - 22272334
Alignment:
Q  68 tagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacacagcatgcaagagat-acgtcatcaccactaacggaggttttggacggaggg 166  Q
    ||||||||||||||||||||||||||||||||| |||||| ||||||||| |||||||||||  || |||||||||||||||||| ||||||| ||||||    
T  22272547 tagtccttgtacacgtggctgccttgttgacacatgtacatgacaacacaacatgcaagagaacacatcatcaccactaacggagcttttggatggaggg 22272448  T
Q  167 accattttgatggacgtctgtaaaattcagggactaaatagatattttgcaaaattcagagacgaatttggccga--ttttttaaaattcagggacgaat 264  Q
    || |||||||||||||| ||||||||||||||||||||||||||||  ||||||||||| |||||||||| | ||  ||||||||||||||  |||||||    
T  22272447 actattttgatggacgtttgtaaaattcagggactaaatagatattacgcaaaattcagggacgaatttgactgattttttttaaaattcaaagacgaat 22272348  T
Q  265 ttgaggtattagtc 278  Q
    ||||||||||||||    
T  22272347 ttgaggtattagtc 22272334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 26 - 278
Target Start/End: Original strand, 33708695 - 33708947
Alignment:
Q  26 actgaaaagttaagtctcgaatttttaccatttccatcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacacagcatgcaa 125  Q
    ||||||| ||||| | ||||||||| || ||||||||||||||||||||||||||||||| || |||| |||| ||||| || ||||||| |||||||||    
T  33708695 actgaaatgttaaatatcgaattttgacaatttccatcaatttagtccttgtacacgtggttgacttgctgacgcgtgtgcatgacaacaaagcatgcaa 33708794  T
Q  126 g-agatacgtcatcaccactaacggaggttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatattttgcaaaattca 224  Q
    | ||  || ||||||| | |||||||  ||||||||||||||||   |||||||||||| ||||||||||||||||||| |  |||||| ||||||||||    
T  33708795 gaagccacatcatcactattaacggaccttttggacggagggacagatttgatggacgtttgtaaaattcagggactaatttaatatttcgcaaaattca 33708894  T
Q  225 gagacgaatttggccgattttttaaaattcagggacgaatttgaggtattagtc 278  Q
    | |||||| ||| ||| |||||||||||||| ||| ||||||||||||||||||    
T  33708895 gggacgaaattgaccg-ttttttaaaattcaaggatgaatttgaggtattagtc 33708947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 189 - 281
Target Start/End: Original strand, 22273891 - 22273983
Alignment:
Q  189 aaattcagggactaaatagatattttgcaaaattcagagacgaatttggccgattttttaaaattcagggacgaatttgaggtattagtctat 281  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||| ||||||||||||||||||||    
T  22273891 aaattcagggactaaatagatattttgcaaaattcagagacaaatttggccgattttttaaaattcaaggacaaatttgaggtattagtctat 22273983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 189 - 278
Target Start/End: Original strand, 42943426 - 42943515
Alignment:
Q  189 aaattcagggactaaatagatattttgcaaaattcagagacgaatttggccgattttttaaaattcagggacgaatttgaggtattagtc 278  Q
    ||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  42943426 aaattcagggactaaatagatatttcgcaaaattcagggacgaatttggccgattttttaaaattcaaggacgaatttgaggtattagtc 42943515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 189 - 278
Target Start/End: Original strand, 27692837 - 27692926
Alignment:
Q  189 aaattcagggactaaatagatattttgcaaaattcagagacgaatttggccgattttttaaaattcagggacgaatttgaggtattagtc 278  Q
    ||||||||||||||| | ||||||||||||||||||| |||||| ||||||||||||| |||||||| ||||||||||||||||||||||    
T  27692837 aaattcagggactaatttgatattttgcaaaattcagggacgaaattggccgatttttcaaaattcaaggacgaatttgaggtattagtc 27692926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 197 - 278
Target Start/End: Original strand, 34681074 - 34681155
Alignment:
Q  197 ggactaaatagatattttgcaaaattcagagacgaatttggccgattttttaaaattcagggacgaatttgaggtattagtc 278  Q
    ||||||||||||||||| ||||||||||| |||||||||||||||||||| |||||||| ||||||||||||||||||||||    
T  34681074 ggactaaatagatatttcgcaaaattcagggacgaatttggccgatttttgaaaattcaaggacgaatttgaggtattagtc 34681155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 197 - 278
Target Start/End: Complemental strand, 26238807 - 26238726
Alignment:
Q  197 ggactaaatagatattttgcaaaattcagagacgaatttggccgattttttaaaattcagggacgaatttgaggtattagtc 278  Q
    ||||||||||||||||| ||||||||||| |||||||||||| ||||||| |||||||| ||||||||||||||||||||||    
T  26238807 ggactaaatagatatttcgcaaaattcagggacgaatttggctgatttttgaaaattcaaggacgaatttgaggtattagtc 26238726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 61 - 241
Target Start/End: Original strand, 42897680 - 42897861
Alignment:
Q  61 atcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacacagcatgcaaga-gatacgtcatcaccactaacggaggttttgga 159  Q
    ||||| |||||||||| |||||||||| |||| ||| ||||||||||||||||||||||||||| || || |  ||| ||   ||||| |||   |||||    
T  42897680 atcaaattagtccttgaacacgtggcttccttcttgccacgtgtacaagacaacacagcatgcaggacgacagatcagcatggctaacagagcacttgga 42897779  T
Q  160 cggagggaccattttgatggacgtctgtaaaattcagggactaaatagatattttgcaaaattcagagacgaatttggccga 241  Q
    |||||||||| ||||||||||||||||  ||||||| ||||||| | |||||||  || |||| || |||||||||||||||    
T  42897780 cggagggacctttttgatggacgtctgacaaattcaaggactaagttgatatttcacataattgagggacgaatttggccga 42897861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 54 - 268
Target Start/End: Complemental strand, 9184608 - 9184393
Alignment:
Q  54 catttccatcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacacagcatgca-agagatacgtcatcaccactaacggagg 152  Q
    |||||||||||| || ||| |||||||||||| | |||||||||||| |||||||||||||||| ||||||  | || |  ||| || |||||| | ||     
T  9184608 catttccatcaaattggtctttgtacacgtggattccttgttgacacatgtacaagacaacacatcatgcagggcgacagatcagcagcactaatgaagc 9184509  T
Q  153 ttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatattttgcaaaattcagagacgaatttggccgattttttaaaat 252  Q
     |||||||||||||||||||| ||| ||||||||  ||||||||||||||| | ||||||| ||  | ||  | |||||||||||||||||  |  ||||    
T  9184508 atttggacggagggaccatttcgatcgacgtctgacaaattcagggactaatttgatatttcgcgtagttgggcgacgaatttggccgattcgtgcaaat 9184409  T
Q  253 tcagggacgaatttga 268  Q
    ||| ||||||| ||||    
T  9184408 tcaaggacgaaattga 9184393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 189 - 279
Target Start/End: Original strand, 601704 - 601794
Alignment:
Q  189 aaattcagggactaaatagatattttgcaaaattcagagacgaatttggccgattttttaaaattcagggacgaatttgaggtattagtct 279  Q
    ||||||||||||||| | ||||||| | ||||||||| |||||| ||||||||||||| |||||||| |||||||||||||||||||||||    
T  601704 aaattcagggactaatttgatatttcgaaaaattcagggacgaaattggccgatttttcaaaattcaaggacgaatttgaggtattagtct 601794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 189 - 278
Target Start/End: Original strand, 33762713 - 33762802
Alignment:
Q  189 aaattcagggactaaatagatattttgcaaaattcagagacgaatttggccgattttttaaaattcagggacgaatttgaggtattagtc 278  Q
    ||||||||||||||| | ||||||| | ||||||||| |||||| ||||||||||||| |||||||| ||||||||||||||||||||||    
T  33762713 aaattcagggactaatttgatatttcgtaaaattcagggacgaaattggccgatttttcaaaattcaaggacgaatttgaggtattagtc 33762802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 189 - 278
Target Start/End: Original strand, 38548831 - 38548920
Alignment:
Q  189 aaattcagggactaaatagatattttgcaaaattcagagacgaatttggccgattttttaaaattcagggacgaatttgaggtattagtc 278  Q
    ||||||||||| ||| | ||||||| ||||||||||| |||||| ||||||||||||| |||||||| ||||||||||||||||||||||    
T  38548831 aaattcagggattaatttgatatttcgcaaaattcagggacgaaattggccgatttttcaaaattcaaggacgaatttgaggtattagtc 38548920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 189 - 281
Target Start/End: Original strand, 29239187 - 29239279
Alignment:
Q  189 aaattcagggactaaatagatattttgcaaaattcagagacgaatttggccgattttttaaaattcagggacgaatttgaggtattagtctat 281  Q
    ||||||||||||||| | ||||||| | |||||| || |||||| ||||||||||||| |||||||| |||||||||||||||||||||||||    
T  29239187 aaattcagggactaatttgatatttcgaaaaatttagggacgaaattggccgatttttcaaaattcaaggacgaatttgaggtattagtctat 29239279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 189 - 278
Target Start/End: Original strand, 5038062 - 5038150
Alignment:
Q  189 aaattcagggactaaatagatattttgcaaaattcagagacgaatttggccgattttttaaaattcagggacgaatttgaggtattagtc 278  Q
    ||||||||||||||||||| ||||| ||||||||||   ||||||||| ||||||||||||||||||  |||||||||||||||||||||    
T  5038062 aaattcagggactaaatagctatttcgcaaaattcaagaacgaatttgaccgattttttaaaattca-agacgaatttgaggtattagtc 5038150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 189 - 278
Target Start/End: Complemental strand, 13106893 - 13106804
Alignment:
Q  189 aaattcagggactaaatagatattttgcaaaattcagagacgaatttggccgattttttaaaattcagggacgaatttgaggtattagtc 278  Q
    ||||||||||||||| | ||||||| ||||||||||| || ||| ||||||||||||| |||||||| |||||||||| |||||||||||    
T  13106893 aaattcagggactaatttgatatttcgcaaaattcagggatgaaattggccgatttttcaaaattcaaggacgaatttaaggtattagtc 13106804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 189 - 278
Target Start/End: Complemental strand, 29237240 - 29237151
Alignment:
Q  189 aaattcagggactaaatagatattttgcaaaattcagagacgaatttggccgattttttaaaattcagggacgaatttgaggtattagtc 278  Q
    ||||||||||||||| | ||||||| | ||||||||| |||||| ||| ||||||||| |||||||| ||||||||||||||||||||||    
T  29237240 aaattcagggactaatttgatatttcgaaaaattcagggacgaaattgaccgatttttcaaaattcaaggacgaatttgaggtattagtc 29237151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 189 - 278
Target Start/End: Complemental strand, 33761158 - 33761069
Alignment:
Q  189 aaattcagggactaaatagatattttgcaaaattcagagacgaatttggccgattttttaaaattcagggacgaatttgaggtattagtc 278  Q
    ||||||||||||||| | ||||||| ||||||||||| |||||| ||||| ||||||| ||||||||  |||||||||||||||||||||    
T  33761158 aaattcagggactaatttgatatttcgcaaaattcagggacgaaattggctgatttttcaaaattcaaagacgaatttgaggtattagtc 33761069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 189 - 278
Target Start/End: Complemental strand, 35509303 - 35509214
Alignment:
Q  189 aaattcagggactaaatagatattttgcaaaattcagagacgaatttggccgattttttaaaattcagggacgaatttgaggtattagtc 278  Q
    ||||||||||||||| | ||||||| ||||||||||| |||||| ||| ||||||||| |||||||| |||| |||||||||||||||||    
T  35509303 aaattcagggactaatttgatatttcgcaaaattcagggacgaaattgaccgatttttcaaaattcaaggactaatttgaggtattagtc 35509214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 189 - 277
Target Start/End: Complemental strand, 33707295 - 33707207
Alignment:
Q  189 aaattcagggactaaatagatattttgcaaaattcagagacgaatttggccgattttttaaaattcagggacgaatttgaggtattagt 277  Q
    ||||||||||||||| | ||||||| | ||||||||| |||||| ||| ||||||||| |||||||| |||||||||||||||||||||    
T  33707295 aaattcagggactaatttgatatttcgtaaaattcagggacgaaattgaccgatttttcaaaattcaaggacgaatttgaggtattagt 33707207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 144 - 278
Target Start/End: Original strand, 27406907 - 27407041
Alignment:
Q  144 taacggaggttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatattttgcaaaattcagagacgaatttggccgatt 243  Q
    |||||||  |||||||||||| |||   |||||||||||||||||||||||||||||||  |  |||||| | | ||||||  |||||| |||||| |||    
T  27406907 taacggacattttggacggagagactgatttgatggacgtctgtaaaattcagggactattttaatatttcgaataattcatggacgaaattggccaatt 27407006  T
Q  244 ttttaaaattcagggacgaatttgaggtattagtc 278  Q
    ||| |||||||| |||| | |||||||||||||||    
T  27407007 tttcaaaattcaaggactattttgaggtattagtc 27407041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 155 - 268
Target Start/End: Complemental strand, 31821541 - 31821428
Alignment:
Q  155 ttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatattttgcaaaattcagagacgaatttggccgattttttaaaattc 254  Q
    ||||||||||||||| ||||||||||||||||  |||||| |||||||| | ||||||| ||| |||| || |||||| ||| ||||  | | |||||||    
T  31821541 ttggacggagggacctttttgatggacgtctgataaattctgggactaagttgatatttcgcataattgagggacgaagttgaccgacgtgtgaaaattc 31821442  T
Q  255 agggacgaatttga 268  Q
    ||||||||||||||    
T  31821441 agggacgaatttga 31821428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 189 - 278
Target Start/End: Original strand, 35510819 - 35510908
Alignment:
Q  189 aaattcagggactaaatagatattttgcaaaattcagagacgaatttggccgattttttaaaattcagggacgaatttgaggtattagtc 278  Q
    ||||||||||||||| | |||||||  |||||||||  |||||| ||| ||||||||| |||||||| ||||||||||||||||||||||    
T  35510819 aaattcagggactaatttgatatttcacaaaattcaaggacgaaattgaccgatttttcaaaattcaaggacgaatttgaggtattagtc 35510908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 189 - 278
Target Start/End: Complemental strand, 41040809 - 41040720
Alignment:
Q  189 aaattcagggactaaatagatattttgcaaaattcagagacgaatttggccgattttttaaaattcagggacgaatttgaggtattagtc 278  Q
    ||||||| |||| |||||| ||||||| |||||||||| |||||||| |||||||||| ||||||||  ||| |||||||||||||||||    
T  41040809 aaattcaaggacaaaatagctattttggaaaattcagaaacgaatttagccgatttttaaaaattcaaagacaaatttgaggtattagtc 41040720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 17 - 268
Target Start/End: Original strand, 38882660 - 38882911
Alignment:
Q  17 aaaaattatactgaaaagttaagtctcgaatttttaccatttccatcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacac 116  Q
    |||||||| |||||||||| ||  ||  ||||||| ||| |||||| || || ||||||| ||||||| || |||||||| |||| ||||||||||||||    
T  38882660 aaaaattaaactgaaaagtgaaaactgtaattttt-ccacttccattaaattggtccttgaacacgtgacttccttgttgccacgagtacaagacaacac 38882758  T
Q  117 agcatgcaaga-gatacgtcatcaccactaacggaggttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatattttg 215  Q
    |||||||| || || |  ||| ||   |||||||||   ||||||||||||||  |||| |||||||||||  ||||||||||| ||||| ||||| | |    
T  38882759 agcatgcaggacgacagatcaacatggctaacggagcacttggacggagggacattttttatggacgtctgacaaattcagggattaaattgatatctcg 38882858  T
Q  216 caaaattcagagacgaatttggccgattttttaaaattcagggacgaatttga 268  Q
    || | || |  || ||||||| |||||   | |||||||| ||||||||||||    
T  38882859 catagttgaaggatgaatttgaccgatccgtgaaaattcaaggacgaatttga 38882911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 56 - 194
Target Start/End: Complemental strand, 11788544 - 11788405
Alignment:
Q  56 tttccatcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacacagcatgcaag-agatacgtcatcaccactaacggaggtt 154  Q
    |||||||||| || |||||||||||| |||||| ||   |||||||||||||| |||||||| ||| |||| ||| || ||| || ||||||| ||| |     
T  11788544 tttccatcaaattggtccttgtacacatggctgactatatgacacgtgtacaaaacaacacaacatacaagaagacacctcagcatcactaacagagata 11788445  T
Q  155 ttggacggagggaccattttgatggacgtctgtaaaattc 194  Q
    |||||||||||||  | |||||||||||||||| ||||||    
T  11788444 ttggacggagggatgaatttgatggacgtctgttaaattc 11788405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 197 - 280
Target Start/End: Complemental strand, 41823971 - 41823888
Alignment:
Q  197 ggactaaatagatattttgcaaaattcagagacgaatttggccgattttttaaaattcagggacgaatttgaggtattagtcta 280  Q
    ||||||||||||||||| ||||||||||  |||||| || || ||||||| |||||||| |||||||||| |||||||||||||    
T  41823971 ggactaaatagatatttcgcaaaattcaaggacgaaattagctgatttttgaaaattcaaggacgaatttaaggtattagtcta 41823888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 189 - 278
Target Start/End: Complemental strand, 8608327 - 8608237
Alignment:
Q  189 aaattcagggactaaatagatattttgcaaaatt-cagagacgaatttggccgattttttaaaattcagggacgaatttgaggtattagtc 278  Q
    ||||||||||||||| | ||||||| |||||||| ||| |||||| ||| ||||||||| |||||||| |||||||||| |||||||||||    
T  8608327 aaattcagggactaatttgatatttcgcaaaatttcagggacgaaattgaccgatttttcaaaattcaaggacgaatttaaggtattagtc 8608237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 189 - 275
Target Start/End: Original strand, 13283995 - 13284081
Alignment:
Q  189 aaattcagggactaaatagatattttgcaaaattcagagacgaatttggccgattttttaaaattcagggacgaatttgaggtatta 275  Q
    ||||||| ||||||| | ||||||| ||||||||||| ||| || ||||||||||||| |||||||| ||||||||||| |||||||    
T  13283995 aaattcatggactaatttgatatttcgcaaaattcagggacaaaattggccgatttttcaaaattcaaggacgaatttgtggtatta 13284081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 189 - 279
Target Start/End: Complemental strand, 13484634 - 13484544
Alignment:
Q  189 aaattcagggactaaatagatattttgcaaaattcagagacgaatttggccgattttttaaaattcagggacgaatttgaggtattagtct 279  Q
    ||||||| |||| |||||   |||| ||||||||||| |||||||||||||||||||| ||||||||  ||||||||||||| ||||||||    
T  13484634 aaattcaaggacaaaataacaatttcgcaaaattcagggacgaatttggccgatttttgaaaattcaatgacgaatttgaggcattagtct 13484544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 61 - 242
Target Start/End: Original strand, 33750290 - 33750472
Alignment:
Q  61 atcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacacagcatgcaaga-gatacgtcatcaccactaacggaggttttgga 159  Q
    ||||| || |||| || |||| ||||| |||| ||| |||| ||||||||||||||| ||||||||| || |  ||| || | ||||| |||   |||||    
T  33750290 atcaaattcgtccctgaacacatggcttccttcttgccacgcgtacaagacaacacaacatgcaagacgacagatcaacatcgctaacagagcacttgga 33750389  T
Q  160 cggagggaccattttgatggacgtctgtaaaattcagggactaaatagatattttgcaaaattcagagacgaatttggccgat 242  Q
    |||||||||| |||||||| | |||||  ||||||||||||||| | ||||||| ||| |||| || |||||| |||||||||    
T  33750390 cggagggacctttttgatgaatgtctgacaaattcagggactaagttgatatttcgcataattgagggacgaagttggccgat 33750472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 61 - 222
Target Start/End: Original strand, 37525929 - 37526091
Alignment:
Q  61 atcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacacagcatgcaaga-gatacgtcatcaccactaacggaggttttgga 159  Q
    ||||| |||||||||| |||||||||| |||| ||| |||||||| ||||||||||| ||| || || || |  ||| ||  |||||| | |   |||||    
T  37525929 atcaaattagtccttgaacacgtggcttccttcttgccacgtgtataagacaacacaacatacaggacgacagatcaacatgactaacagcgcacttgga 37526028  T
Q  160 cggagggaccattttgatggacgtctgtaaaattcagggactaaatagatattttgcaaaatt 222  Q
    |||||||||| |||||||||| ||||| |||||||||||||||| | ||||||| ||| ||||    
T  37526029 cggagggacctttttgatggatgtctgaaaaattcagggactaagttgatatttcgcataatt 37526091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 61 - 241
Target Start/End: Complemental strand, 1320835 - 1320654
Alignment:
Q  61 atcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacacagcatgca-agagatacgtcatcaccactaacggaggttttgga 159  Q
    ||||| |||||||||| |||||||||| |||| ||| |||||||||||||||||| ||||||||  | || | |||| ||   || |||||    |||||    
T  1320835 atcaaattagtccttgaacacgtggcttccttcttgccacgtgtacaagacaacatagcatgcagggcgacatgtcaccatggctgacggaacacttgga 1320736  T
Q  160 cggagggaccattttgatggacgtctgtaaaattcagggactaaatagatattttgcaaaattcagagacgaatttggccga 241  Q
    |||| ||||| | || |||||||||||  ||||||||||||||| | ||||||||||| |||| || || |||||| |||||    
T  1320735 cggaaggaccttatttatggacgtctgacaaattcagggactaagttgatattttgcataattgagggatgaatttagccga 1320654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 189 - 278
Target Start/End: Original strand, 15308261 - 15308350
Alignment:
Q  189 aaattcagggactaaatagatattttgcaaaattcagagacgaatttggccgattttttaaaattcagggacgaatttgaggtattagtc 278  Q
    ||||||||||||||| | ||||||| | | ||||||| |||||| ||||||||||||| |||||||| |||| | |||||||||||||||    
T  15308261 aaattcagggactaatttgatatttcgaataattcagggacgaaattggccgatttttcaaaattcaaggactattttgaggtattagtc 15308350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 189 - 278
Target Start/End: Original strand, 15488630 - 15488719
Alignment:
Q  189 aaattcagggactaaatagatattttgcaaaattcagagacgaatttggccgattttttaaaattcagggacgaatttgaggtattagtc 278  Q
    ||||||||||||||| | ||||||| | | ||||||| |||||| ||||||||||||| |||||||| |||| | |||||||||||||||    
T  15488630 aaattcagggactaatttgatatttcgaataattcagggacgaaattggccgatttttcaaaattcaaggactattttgaggtattagtc 15488719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 197 - 278
Target Start/End: Original strand, 43262145 - 43262226
Alignment:
Q  197 ggactaaatagatattttgcaaaattcagagacgaatttggccgattttttaaaattcagggacgaatttgaggtattagtc 278  Q
    ||||||||||||||||| |||||||| || | ||||||| || ||||||| |||||| | ||||||||||||||||||||||    
T  43262145 ggactaaatagatatttcgcaaaatttagggtcgaatttagctgatttttgaaaatttaaggacgaatttgaggtattagtc 43262226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 144 - 260
Target Start/End: Complemental strand, 15305931 - 15305815
Alignment:
Q  144 taacggaggttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatattttgcaaaattcagagacgaatttggccgatt 243  Q
    |||||||  ||||||||||||||||   |||||||||||||||||||||||||||||||| | |||||||   | ||||||| ||| || ||| || |||    
T  15305931 taacggatattttggacggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcaaataattcagggacaaaattgaccaatt 15305832  T
Q  244 ttttaaaattcagggac 260  Q
    ||| |||||||| ||||    
T  15305831 tttcaaaattcaaggac 15305815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 144 - 260
Target Start/End: Complemental strand, 15486300 - 15486184
Alignment:
Q  144 taacggaggttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatattttgcaaaattcagagacgaatttggccgatt 243  Q
    |||||||  ||||||||||||||||   |||||||||||||||||||||||||||||||| | |||||||   | ||||||| ||| || ||| || |||    
T  15486300 taacggatattttggacggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcaaataattcagggacaaaattgaccaatt 15486201  T
Q  244 ttttaaaattcagggac 260  Q
    ||| |||||||| ||||    
T  15486200 tttcaaaattcaaggac 15486184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 48 - 241
Target Start/End: Complemental strand, 8654730 - 8654537
Alignment:
Q  48 ttttaccatttccatcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacacagcatgca-agagatacgtcatcaccactaa 146  Q
    |||| ||| ||| ||||| |||||||||| ||| |||||| |||| ||| ||||||||||||||||||  |||||||  | || | |||| ||   ||||    
T  8654730 tttttccaattcaatcaaattagtccttgaacatgtggcttccttcttgccacgtgtacaagacaacattgcatgcagggcgacatgtcagcatggctaa 8654631  T
Q  147 cggaggttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatattttgcaaaattcagagacgaatttggccga 241  Q
    |||||   ||||||||||||||| ||||||||||||||||  ||||||| | | ||||| ||||||| ||| |||| ||  ||||||||| ||||    
T  8654630 cggagcacttggacggagggacccttttgatggacgtctgataaattcaagaattaaat-gatatttcgcataattgaggaacgaatttgaccga 8654537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 159 - 241
Target Start/End: Original strand, 31201148 - 31201230
Alignment:
Q  159 acggagggaccattttgatggacgtctgtaaaattcagggactaaatagatattttgcaaaattcagagacgaatttggccga 241  Q
    ||||||||||| ||||||||||||||||  ||||||||||| ||||| ||||||| ||| |||| |  |||||||||||||||    
T  31201148 acggagggacctttttgatggacgtctgataaattcagggattaaattgatatttcgcataattgatggacgaatttggccga 31201230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 56 - 200
Target Start/End: Original strand, 15145663 - 15145808
Alignment:
Q  56 tttccatcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacacagcatgcaag-agatacgtcatcaccactaacggaggtt 154  Q
    |||| ||||| || ||||||||||| |||||| |||||| ||||||||||||||||||||   |||| | | ||| |  ||| || ||||||| |||  |    
T  15145663 tttcaatcaaattggtccttgtacatgtggcttccttgtcgacacgtgtacaagacaacaagccatgtaggaagacaactcaacagcactaacagagcat 15145762  T
Q  155 ttggacggagggaccattttgatggacgtctgtaaaattcagggac 200  Q
    ||||||||| |||| |||||||| ||||| ||| ||||||||||||    
T  15145763 ttggacggaaggactattttgatcgacgtttgttaaattcagggac 15145808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 76 - 127
Target Start/End: Original strand, 11722730 - 11722781
Alignment:
Q  76 gtacacgtggctgccttgttgacacgtgtacaagacaacacagcatgcaaga 127  Q
    |||||||||||| |||||||||||||||||||| |||||||| |||||||||    
T  11722730 gtacacgtggcttccttgttgacacgtgtacaacacaacacaacatgcaaga 11722781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 45 - 127
Target Start/End: Complemental strand, 6164737 - 6164655
Alignment:
Q  45 aatttttaccatttccatcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacacagcatgcaaga 127  Q
    |||||||| | |||||||||| || |||||||||||||||| |  ||| ||||||||||||||||| |||||  |||||||||    
T  6164737 aatttttagcgtttccatcaaattggtccttgtacacgtggttttcttattgacacgtgtacaagataacacgacatgcaaga 6164655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 189 - 275
Target Start/End: Complemental strand, 9672066 - 9671980
Alignment:
Q  189 aaattcagggactaaatagatattttgcaaaattcagagacgaatttggccgattttttaaaattcagggacgaatttgaggtatta 275  Q
    |||||| |||||||||||||||||| ||||||||||  ||||||||||   ||||  | |||||||| |||||||||| ||||||||    
T  9672066 aaattcggggactaaatagatatttcgcaaaattcatggacgaatttgattgattggtgaaaattcaaggacgaatttaaggtatta 9671980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 14 - 88
Target Start/End: Original strand, 27406817 - 27406891
Alignment:
Q  14 aggaaaaattatactgaaaagttaagtctcgaatttttaccatttccatcaatttagtccttgtacacgtggctg 88  Q
    ||||||||| | ||||||| ||||| | |  |||||| ||||||||||||| |||||||||||||||||||||||    
T  27406817 aggaaaaatgagactgaaatgttaatttttaaattttgaccatttccatcagtttagtccttgtacacgtggctg 27406891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 189 - 266
Target Start/End: Complemental strand, 3152046 - 3151969
Alignment:
Q  189 aaattcagggactaaatagatattttgcaaaattcagagacgaatttggccgattttttaaaattcagggacgaattt 266  Q
    ||||| ||||||||||||| ||||||| |||| |||| ||| ||||||||| ||||||| ||||||| |||| |||||    
T  3152046 aaattaagggactaaatagctattttgaaaaactcagggacaaatttggccaatttttttaaattcaaggacaaattt 3151969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 56 - 117
Target Start/End: Original strand, 28433638 - 28433699
Alignment:
Q  56 tttccatcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacaca 117  Q
    |||||||||||||||||| ||||||||||||| |||| ||  |||||||||||| |||||||    
T  28433638 tttccatcaatttagtccatgtacacgtggcttcctttttcccacgtgtacaagccaacaca 28433699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 155 - 268
Target Start/End: Complemental strand, 32822484 - 32822371
Alignment:
Q  155 ttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatattttgcaaaattcagagacgaatttggccgattttttaaaattc 254  Q
    ||||||||| ||||| ||||||||||| ||||  ||||||||||||||| | ||||||||  | |||| || || |||||||||||||   | |||||||    
T  32822484 ttggacggaaggacctttttgatggacatctgacaaattcagggactaagttgatattttaaataattgagggatgaatttggccgatccataaaaattc 32822385  T
Q  255 agggacgaatttga 268  Q
    | ||||||| ||||    
T  32822384 aaggacgaagttga 32822371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 16 - 88
Target Start/End: Complemental strand, 15306019 - 15305947
Alignment:
Q  16 gaaaaattatactgaaaagttaagtctcgaatttttaccatttccatcaatttagtccttgtacacgtggctg 88  Q
    ||||||| | ||| ||| ||||||| | ||||||| ||||||||||||| ||||||||||||| |||||||||    
T  15306019 gaaaaatgagactaaaatgttaagttttgaattttgaccatttccatcagtttagtccttgtatacgtggctg 15305947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 16 - 88
Target Start/End: Complemental strand, 15486388 - 15486316
Alignment:
Q  16 gaaaaattatactgaaaagttaagtctcgaatttttaccatttccatcaatttagtccttgtacacgtggctg 88  Q
    ||||||| | ||| ||| ||||||| | ||||||| ||||||||||||| ||||||||||||| |||||||||    
T  15486388 gaaaaatgagactaaaatgttaagttttgaattttgaccatttccatcagtttagtccttgtatacgtggctg 15486316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 227 - 278
Target Start/End: Complemental strand, 600811 - 600760
Alignment:
Q  227 gacgaatttggccgattttttaaaattcagggacgaatttgaggtattagtc 278  Q
    |||||| ||||| ||||||| |||||||| ||||||||||||||||||||||    
T  600811 gacgaaattggctgatttttcaaaattcaaggacgaatttgaggtattagtc 600760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 153 - 268
Target Start/End: Original strand, 28433715 - 28433830
Alignment:
Q  153 ttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatattttgcaaaattcagagacgaatttggccgattttttaaaat 252  Q
    |||||||||||||||| |  | ||||||||||    ||||||||||||||  | ||||||| |  ||||| || ||||||||||||||||  || |||||    
T  28433715 ttttggacggagggacgaaatcgatggacgtcaaacaaattcagggactattttgatatttcgttaaattgagggacgaatttggccgatccttgaaaat 28433814  T
Q  253 tcagggacgaatttga 268  Q
    ||||||||||| ||||    
T  28433815 tcagggacgaaattga 28433830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #66
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 161 - 268
Target Start/End: Original strand, 33160155 - 33160262
Alignment:
Q  161 ggagggaccattttgatggacgtctgtaaaattcagggactaaatagatattttgcaaaattcagagacgaatttggccgattttttaaaattcagggac 260  Q
    ||||||||| ||||||||| ||||||  |||||||| |||||| | |||||||  || |||| || || ||||||||||||  | | |||||||| ||||    
T  33160155 ggagggacctttttgatgggcgtctgacaaattcagagactaagttgatatttcacataattgagggatgaatttggccgacctgtgaaaattcaaggac 33160254  T
Q  261 gaatttga 268  Q
    ||||||||    
T  33160255 gaatttga 33160262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #67
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 189 - 275
Target Start/End: Complemental strand, 27404299 - 27404213
Alignment:
Q  189 aaattcagggactaaatagatattttgcaaaattcagagacgaatttggccgattttttaaaattcagggacgaatttgaggtatta 275  Q
    ||||| ||||||||  | ||||||| | | ||||||| |||||| ||||||||||||| |||||||| |||| | ||||||||||||    
T  27404299 aaatttagggactattttgatatttcgaataattcagggacgaaattggccgatttttcaaaattcaaggactattttgaggtatta 27404213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #68
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 155 - 268
Target Start/End: Original strand, 462371 - 462484
Alignment:
Q  155 ttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatattttgcaaaattcagagacgaatttggccgattttttaaaattc 254  Q
    ||||| ||||||| | ||||||||||||| ||  ||||||| ||||||| | ||||||| ||| |||| |  || ||||||||||||| | | |||||||    
T  462371 ttggatggagggatctttttgatggacgtttgacaaattcaaggactaagttgatatttcgcataattgacggatgaatttggccgatctgtaaaaattc 462470  T
Q  255 agggacgaatttga 268  Q
    |  |||||||||||    
T  462471 aatgacgaatttga 462484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #69
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 56 - 120
Target Start/End: Original strand, 40020557 - 40020621
Alignment:
Q  56 tttccatcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacacagca 120  Q
    |||||||||||||||||| ||||||||||| |  ||| ||  |||||||||||| ||||||||||    
T  40020557 tttccatcaatttagtccctgtacacgtggttttctttttcccacgtgtacaagccaacacagca 40020621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #70
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 61 - 124
Target Start/End: Complemental strand, 32822578 - 32822515
Alignment:
Q  61 atcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacacagcatgca 124  Q
    ||||| ||||||| || |||||||||| |||| ||| |||| ||||||||||||| ||||||||    
T  32822578 atcaaattagtccctgaacacgtggcttccttcttgccacgcgtacaagacaacaaagcatgca 32822515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #71
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 97 - 203
Target Start/End: Complemental strand, 37801648 - 37801541
Alignment:
Q  97 acacgtgtacaagacaacacagcatgcaaga-gatacgtcatcaccactaacggaggttttggacggagggaccattttgatggacgtctgtaaaattca 195  Q
    |||||||||||||||||||   |||||| || || |  ||| ||||||||||| |   |||||||||| |||||| |||||| ||||| ||| |||||||    
T  37801648 acacgtgtacaagacaacaagccatgcaggaagacaactcagcaccactaacgaaccatttggacggaaggaccaatttgattgacgtttgttaaattca 37801549  T
Q  196 gggactaa 203  Q
    ||||||||    
T  37801548 gggactaa 37801541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #72
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 189 - 268
Target Start/End: Original strand, 44620671 - 44620750
Alignment:
Q  189 aaattcagggactaaatagatattttgcaaaattcagagacgaatttggccgattttttaaaattcagggacgaatttga 268  Q
    |||||||||||| |||| ||||||||||||||||  | ||||| |||| |||||  ||  ||||||||||||||| ||||    
T  44620671 aaattcagggacgaaattgatattttgcaaaatttggggacgattttgaccgatgcttgcaaattcagggacgaagttga 44620750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 219; Significance: 1e-120; HSPs: 70)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 219; E-Value: 1e-120
Query Start/End: Original strand, 14 - 280
Target Start/End: Original strand, 34777998 - 34778264
Alignment:
Q  14 aggaaaaattatactgaaaagttaagtctcgaatttttaccatttccatcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaa 113  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34777998 aggaaaaattatactgaaaagttaagtctcgaatttttaccatttccatcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaa 34778097  T
Q  114 cacagcatgcaagagatacgtcatcaccactaacggaggttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatattt 213  Q
    ||||  ||||||| || ||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||| | |||||||    
T  34778098 cacaatatgcaagggacacgtcatcaccactaacggagcttttggacggagggaccattttgatggacatctgtaaaattcagggactaatttgatattt 34778197  T
Q  214 tgcaaaattcagagacgaatttggccgattttttaaaattcagggacgaatttgaggtattagtcta 280  Q
     ||||||||||| |||| |||||||||||||||||||||||| ||||||||||||||||||||||||    
T  34778198 cgcaaaattcagggacgtatttggccgattttttaaaattcaaggacgaatttgaggtattagtcta 34778264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 213; E-Value: 1e-117
Query Start/End: Original strand, 14 - 278
Target Start/End: Original strand, 4855826 - 4856090
Alignment:
Q  14 aggaaaaattatactgaaaagttaagtctcgaatttttaccatttccatcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaa 113  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  4855826 aggaaaaattatactgaaaagttaagtctcaaatttttaccatttccatcaatttagtccttgtacacgtgactgccttgttgacacgtgtacaagacaa 4855925  T
Q  114 cacagcatgcaagagatacgtcatcaccactaacggaggttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatattt 213  Q
    |||| |||||||| || |||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||    
T  4855926 cacaacatgcaagggacacgtcatcaccattaacggagcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaatttgatattt 4856025  T
Q  214 tgcaaaattcagagacgaatttggccgattttttaaaattcagggacgaatttgaggtattagtc 278  Q
     ||||||||||| |||| |||||||||||||||||||||||| ||||||||||||||||||||||    
T  4856026 cgcaaaattcagggacgtatttggccgattttttaaaattcaaggacgaatttgaggtattagtc 4856090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 205; E-Value: 1e-112
Query Start/End: Original strand, 14 - 278
Target Start/End: Complemental strand, 27087547 - 27087283
Alignment:
Q  14 aggaaaaattatactgaaaagttaagtctcgaatttttaccatttccatcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaa 113  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  27087547 aggaaaaattatattgaaaagttaagtctcgaatttttaccatttccatcaattcagtccttgtacacgtggctgccttgttgacacgtgtacaagacaa 27087448  T
Q  114 cacagcatgcaagagatacgtcatcaccactaacggaggttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatattt 213  Q
    ||||||||||||| || || |||||||||||||||||| ||||||||||| || |||||||||||||||| |||||||||||||||||||||||||||||    
T  27087447 cacagcatgcaagggacacatcatcaccactaacggagcttttggacggatgggccattttgatggacgtttgtaaaattcagggactaaatagatattt 27087348  T
Q  214 tgcaaaattcagagacgaatttggccgattttttaaaattcagggacgaatttgaggtattagtc 278  Q
     ||||||||||| ||| |||||| |||||||||||||||| | ||||||||||||||||||||||    
T  27087347 cgcaaaattcagggacaaatttgaccgattttttaaaatttaaggacgaatttgaggtattagtc 27087283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 202; E-Value: 1e-110
Query Start/End: Original strand, 14 - 278
Target Start/End: Original strand, 31238354 - 31238619
Alignment:
Q  14 aggaaaaattatactgaaaagttaagtctcgaatttttaccatttccatcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaa 113  Q
    ||||||||||| ||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||    
T  31238354 aggaaaaattacactgaaaagttaaatctcgaatttttaccatttccatcaaattagtccttgtacacgtggctgccttgttgacacgtgtacatgacaa 31238453  T
Q  114 cacagcatgcaagag-atacgtcatcaccactaacggaggttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatatt 212  Q
    ||||||||| ||||| | ||||||||||||||||||||| |||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||    
T  31238454 cacagcatggaagaggacacgtcatcaccactaacggagcttttggacagatggaccattttgatggacgtctgtaaaattcagggactaaatagatatt 31238553  T
Q  213 ttgcaaaattcagagacgaatttggccgattttttaaaattcagggacgaatttgaggtattagtc 278  Q
    | ||||||||||| ||| ||||||||||||||||||||||||| |||| |||||||||||||||||    
T  31238554 tcgcaaaattcagggacaaatttggccgattttttaaaattcaaggacaaatttgaggtattagtc 31238619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 198; E-Value: 1e-108
Query Start/End: Original strand, 14 - 278
Target Start/End: Original strand, 6818537 - 6818802
Alignment:
Q  14 aggaaaaattatactgaaaagttaagtctcgaatttttaccatttccatcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaa 113  Q
    ||||||||||| ||||||||||||| |||| ||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||| |||||    
T  6818537 aggaaaaattacactgaaaagttaaatctcaaatttttaccatttctatcaaattagtccttgtacacgtggctgccttgttgacacgtgtacatgacaa 6818636  T
Q  114 cacagcatgcaagag-atacgtcatcaccactaacggaggttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatatt 212  Q
    |||| |||||||||| | | ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6818637 cacaacatgcaagaggacatgtcatcaccactaacggagcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatatt 6818736  T
Q  213 ttgcaaaattcagagacgaatttggccgattttttaaaattcagggacgaatttgaggtattagtc 278  Q
    |||| |||| ||| ||||| ||||||||||||||||||||||| ||||||||||||||||||||||    
T  6818737 ttgctaaatccagggacgagtttggccgattttttaaaattcaaggacgaatttgaggtattagtc 6818802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 28 - 278
Target Start/End: Original strand, 25278241 - 25278492
Alignment:
Q  28 tgaaaagttaagtctcgaatttttaccatttccatcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacacagcatgcaaga 127  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||| |||| |||||||||    
T  25278241 tgaaaagttaaatctcgaatttttaccatttccatcaatttagtccttatacacgtggctgccttgttgacacgtgtacatgacagcacatcatgcaaga 25278340  T
Q  128 g-atacgtcatcaccactaacggaggttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatattttgcaaaattcaga 226  Q
    | | ||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||| ||||||||||| ||||| |||||||||||     
T  25278341 ggacacgtcatcaccactaacggagcttttggacggagggaccattttgatggacgtatgtaaaattcaaggactaaataggtatttcgcaaaattcagg 25278440  T
Q  227 gacgaatttggccgattttttaaaattcagggacgaatttgaggtattagtc 278  Q
    |||||||||| |||||||||||||||||| ||||||||||||||||||||||    
T  25278441 gacgaatttgaccgattttttaaaattcaaggacgaatttgaggtattagtc 25278492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 28 - 278
Target Start/End: Complemental strand, 37344593 - 37344342
Alignment:
Q  28 tgaaaagttaagtctcgaatttttaccatttccatcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacacagcatgcaaga 127  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||| |||||||||    
T  37344593 tgaaaagttaaatctcgaatttttaccatttccatcaatttagtccttatacacgtggctgccttgttgacacgtgtacatgacaacacatcatgcaaga 37344494  T
Q  128 g-atacgtcatcaccactaacggaggttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatattttgcaaaattcaga 226  Q
    | | ||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||  |||||||||| ||||| |||||||||||     
T  37344493 ggacacgtcatcaccactaacggagcttttggacggagggaccattttgatggacgtatgtaaaattcaaagactaaataggtatttcgcaaaattcagg 37344394  T
Q  227 gacgaatttggccgattttttaaaattcagggacgaatttgaggtattagtc 278  Q
    |||||||||| |||||||||||||||||| ||||||||||||||||||||||    
T  37344393 gacgaatttgaccgattttttaaaattcaaggacgaatttgaggtattagtc 37344342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 183; E-Value: 5e-99
Query Start/End: Original strand, 14 - 279
Target Start/End: Complemental strand, 2869844 - 2869578
Alignment:
Q  14 aggaaaaattatactgaaaagttaagtctcgaatttttaccatttccatcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaa 113  Q
    ||||||||||| |||||||||| || |||| ||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||    
T  2869844 aggaaaaattacactgaaaagtcaaatctcaaatttttactatttccatcaatttagtccttgtacatgtggctgccttgttgacacgtgtacaggacaa 2869745  T
Q  114 cacagcatgcaaga-gatacgtcatcaccactaacggaggttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatatt 212  Q
    |||| ||||||||| || || |||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||    
T  2869744 cacatcatgcaagatgacacatcatcaccactaacagagcttttggacggagggaccattttgatggacgtctgtaaaatttagagactaaatagatatt 2869645  T
Q  213 ttgcaaaattcagagacgaatttggccgattttttaaaattcagggacgaatttgaggtattagtct 279  Q
    | ||||||||||| |||||||||| ||||||||| |||||||| |||||||||||||||||||||||    
T  2869644 tcgcaaaattcagggacgaatttgaccgatttttgaaaattcaaggacgaatttgaggtattagtct 2869578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 182; E-Value: 2e-98
Query Start/End: Original strand, 16 - 280
Target Start/End: Original strand, 50555958 - 50556223
Alignment:
Q  16 gaaaaattatactgaaaagttaagtctcgaatttttaccatttccatcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaaca 115  Q
    ||||||||| | |||||||| || |||||||||||||||||||||||||| |||||||||||||||||| || ||||||||||||||||||| |||||||    
T  50555958 gaaaaattacattgaaaagtcaaatctcgaatttttaccatttccatcaaattagtccttgtacacgtgactcccttgttgacacgtgtacatgacaaca 50556057  T
Q  116 cagcatgcaaga-gatacgtcatcaccactaacggaggttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatatttt 214  Q
    |||||||||||| || ||| ||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||     
T  50556058 cagcatgcaagatgacacgccatcaccactaacggagcttttggacggagggaccattttgatagacgtctgtaaaatttagggactaaatagatatttc 50556157  T
Q  215 gcaaaattcagagacgaatttggccgattttttaaaattcagggacgaatttgaggtattagtcta 280  Q
    |||||||||||||||||||||| | ||||||||||||||||  |||||||||||| ||||||||||    
T  50556158 gcaaaattcagagacgaatttgactgattttttaaaattcaaagacgaatttgagatattagtcta 50556223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 181; E-Value: 8e-98
Query Start/End: Original strand, 14 - 278
Target Start/End: Original strand, 3013329 - 3013600
Alignment:
Q  14 aggaaaaattatactgaaaagttaagtctcgaatttttaccatttccatcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaa 113  Q
    ||||||||||| ||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  3013329 aggaaaaattacactgaaaagttaaatctcaaatttttaccatttccatcaatttagtccttgtacacgtggctgccttgttgacacgtgtacatgacaa 3013428  T
Q  114 cacagcatgcaaga-gatacgtcatcaccactaacggaggttttggacggagggaccattttg------atggacgtctgtaaaattcagggactaaata 206  Q
    ||| |||||||||| ||||| |||||||||||||||||| |||||||||||||||| ||||||      |||||||||||||||||||||||||||||||    
T  3013429 cacggcatgcaagaggatacatcatcaccactaacggagcttttggacggagggactattttgatgtccatggacgtctgtaaaattcagggactaaata 3013528  T
Q  207 gatattttgcaaaattcagagacgaatttggccgattttttaaaattcagggacgaatttgaggtattagtc 278  Q
    ||||||| ||||||||||  |||||||||| | ||| |||||||||||| ||||||||||||||||||||||    
T  3013529 gatatttcgcaaaattcatggacgaatttgactgatgttttaaaattcaaggacgaatttgaggtattagtc 3013600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 163; E-Value: 5e-87
Query Start/End: Original strand, 17 - 238
Target Start/End: Complemental strand, 15104703 - 15104481
Alignment:
Q  17 aaaaattatactgaaaagttaagtctcgaatttttaccatttccatcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacac 116  Q
    |||||| | ||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||    
T  15104703 aaaaatgacactgaaaagttaaatctcgaatttttaccatttccatcaaattagtccttgtacacgtggctgccttattgacacgtgtacaagacaacac 15104604  T
Q  117 agcatgcaag-agatacgtcatcaccactaacggaggttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatattttg 215  Q
    |||||||||| ||| || ||||||||||||| |||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  15104603 agcatgcaagaagacacatcatcaccactaatggagcttttggacggaaggaccattttgatggacgtctgtaaaattcagggactaaatagatatttcg 15104504  T
Q  216 caaaattcagagacgaatttggc 238  Q
    ||||||||||  |||||||||||    
T  15104503 caaaattcaggaacgaatttggc 15104481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 138; E-Value: 4e-72
Query Start/End: Original strand, 26 - 278
Target Start/End: Original strand, 46583427 - 46583680
Alignment:
Q  26 actgaaaagttaagtctcgaatttttaccatttccatcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacacagcatgcaa 125  Q
    ||||||| ||||| | ||||||||| ||||||| ||||||||||||||||||||||||||||| |||| ||||||||||||| ||||| | |||||||||    
T  46583427 actgaaatgttaaatatcgaattttgaccattttcatcaatttagtccttgtacacgtggctgacttgctgacacgtgtacatgacaagaaagcatgcaa 46583526  T
Q  126 ga-gatacgtcatcaccactaacggaggttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatattttgcaaaattca 224  Q
    || |  || ||||||||| |||||||  |||||||||||||||| | |||||||||||||||||||||||||||||||| | ||||||| ||||||||||    
T  46583527 gaagccacatcatcaccattaacggaccttttggacggagggacaaatttgatggacgtctgtaaaattcagggactaatttgatatttcgcaaaattca 46583626  T
Q  225 gagacgaatttggccgattttttaaaattcagggacgaatttgaggtattagtc 278  Q
    | ||| || ||| ||||||||| |||||||| ||||||||||||||||||||||    
T  46583627 gggacaaaattgaccgatttttcaaaattcaaggacgaatttgaggtattagtc 46583680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 26 - 275
Target Start/End: Original strand, 33602515 - 33602765
Alignment:
Q  26 actgaaaagttaagtctcgaatttttaccatttccatcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacacagcatgcaa 125  Q
    ||||||| ||||| ||||||||||| || ||||||||||||||||||||||||||| |||||| |||| ||||||||||||||||||||||| |||||||    
T  33602515 actgaaatgttaaatctcgaattttgactatttccatcaatttagtccttgtacacatggctgacttgctgacacgtgtacaagacaacacaacatgcaa 33602614  T
Q  126 ga-gatacgtcatcaccactaacggaggttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatattttgcaaaattca 224  Q
    || |  || ||||||  |||||||||  |||||||||||||||| | ||||| |||||||||||||||||||||||||| | |||||||  |||||||||    
T  33602615 gaagccacatcatcattactaacggaccttttggacggagggactaatttgacggacgtctgtaaaattcagggactaatttgatatttcacaaaattca 33602714  T
Q  225 gagacgaatttggccgattttttaaaattcagggacgaatttgaggtatta 275  Q
    | |||||| ||| ||||||||| |||||||| |||||||||||||||||||    
T  33602715 gggacgaaattgaccgatttttcaaaattcaaggacgaatttgaggtatta 33602765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 14 - 159
Target Start/End: Original strand, 26225413 - 26225558
Alignment:
Q  14 aggaaaaattatactgaaaagttaagtctcgaatttttaccatttccatcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaa 113  Q
    ||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||    
T  26225413 aggaaaaattatattgaaaagttaagtttcgaatttttaccatttccatcaatttagtccttgtacatgtggctgctttgttgacacgtgtacaagacaa 26225512  T
Q  114 cacagcatgcaagagatacgtcatcaccactaacggaggttttgga 159  Q
    |||| |||||||| || ||||||||| || ||| |||| |||||||    
T  26225513 cacatcatgcaagggacacgtcatcagcattaatggagcttttgga 26225558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 45 - 275
Target Start/End: Original strand, 52643510 - 52643736
Alignment:
Q  45 aatttttaccatttccatcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacacagcatgcaagag-atacgtcatcaccac 143  Q
    ||||||||||| ||||||||| |||||| ||||||||||| |||| ||||||||| ||||||| |||||||||  | ||||||| | || ||||||||||    
T  52643510 aatttttaccagttccatcaaattagtcattgtacacgtgactgcattgttgacatgtgtacaggacaacacaatacgcaagagaacacatcatcaccac 52643609  T
Q  144 taacggaggttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatattttgcaaaattcagagacgaatttggccgatt 243  Q
    |||||||| |||||||||||| |||||| |     ||||| | |||||||||||||||||||| |||||| ||||||||||| |||||||||  | ||||    
T  52643610 taacggagcttttggacggagagaccatct-----gacgtttataaaattcagggactaaataaatatttcgcaaaattcagggacgaatttaactgatt 52643704  T
Q  244 ttttaaaattcagggacgaatttgaggtatta 275  Q
    ||| |||||| | |||||||||||||||||||    
T  52643705 tttaaaaatttaaggacgaatttgaggtatta 52643736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 118 - 278
Target Start/End: Original strand, 51896115 - 51896276
Alignment:
Q  118 gcatgcaagag-atacgtcatcaccactaacggaggttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatattttgc 216  Q
    ||||||||||| | || |||||||||||||| ||| |||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||| ||    
T  51896115 gcatgcaagaggacacatcatcaccactaacagagcttttggacggagggactattttgatggacatctgtaaaattcagggactaaatagatatttcgc 51896214  T
Q  217 aaaattcagagacgaatttggccgattttttaaaattcagggacgaatttgaggtattagtc 278  Q
    ||||||||| ||| |||||| | |||||||||||||| | ||||| ||||||||||| ||||    
T  51896215 aaaattcagggacaaatttgactgattttttaaaatttaaggacggatttgaggtatcagtc 51896276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 176 - 278
Target Start/End: Original strand, 25278975 - 25279077
Alignment:
Q  176 atggacgtctgtaaaattcagggactaaatagatattttgcaaaattcagagacgaatttggccgattttttaaaattcagggacgaatttgaggtatta 275  Q
    |||||||||||||||||||||||||||||||||||||| |||||||| ||  ||||||||||| ||||||| |||||||| |||||||||||||||||||    
T  25278975 atggacgtctgtaaaattcagggactaaatagatatttcgcaaaatttaggaacgaatttggctgatttttgaaaattcaaggacgaatttgaggtatta 25279074  T
Q  276 gtc 278  Q
    |||    
T  25279075 gtc 25279077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 134 - 280
Target Start/End: Original strand, 9121648 - 9121794
Alignment:
Q  134 tcatcaccactaacggaggttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatattttgcaaaattcagagacgaat 233  Q
    ||||||| | |||||||  ||||||||||||||||   ||||||||||||||| |||||||||||||||| | ||||||| | |||||| || ||||||     
T  9121648 tcatcactattaacggacattttggacggagggactgatttgatggacgtctgcaaaattcagggactaatttgatatttcgaaaaatttagggacgaaa 9121747  T
Q  234 ttggccgattttttaaaattcagggacgaatttgaggtattagtcta 280  Q
    ||||||||||||| |||||||| |||| | |||||||||||||||||    
T  9121748 ttggccgatttttcaaaattcaaggactattttgaggtattagtcta 9121794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 63 - 222
Target Start/End: Complemental strand, 51122121 - 51121961
Alignment:
Q  63 caatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacacagcatgcaag-agatacgtcatcaccactaacggaggttttggacg 161  Q
    |||||||||||||||||||||| || |||| |||||||||||||| ||||||||| |||||| | ||  |  ||| || ||||||| ||  |||||||||    
T  51122121 caatttagtccttgtacacgtgacttcctttttgacacgtgtacatgacaacacaacatgcagggagccagctcaacatcactaacagaccttttggacg 51122022  T
Q  162 gagggaccattttgatggacgtctgtaaaattcagggactaaatagatattttgcaaaatt 222  Q
    ||||||||||||||||||||||  |  |||||||||||| |||| ||||||||||||||||    
T  51122021 gagggaccattttgatggacgtgagagaaattcagggacgaaattgatattttgcaaaatt 51121961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 191 - 280
Target Start/End: Complemental strand, 8168029 - 8167940
Alignment:
Q  191 attcagggactaaatagatattttgcaaaattcagagacgaatttggccgattttttaaaattcagggacgaatttgaggtattagtcta 280  Q
    ||||||||||||| | ||||||| |||||||||||||||||| ||||||||||||| |||||||| ||||||||||||||||||||||||    
T  8168029 attcagggactaatttgatatttcgcaaaattcagagacgaaattggccgatttttcaaaattcaaggacgaatttgaggtattagtcta 8167940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 189 - 278
Target Start/End: Complemental strand, 31236908 - 31236819
Alignment:
Q  189 aaattcagggactaaatagatattttgcaaaattcagagacgaatttggccgattttttaaaattcagggacgaatttgaggtattagtc 278  Q
    ||||||||| ||||||||||||||| ||||||||||| ||| |||||| |||||||||||||||||| ||||||||||||||||||||||    
T  31236908 aaattcaggaactaaatagatatttcgcaaaattcagggacaaatttgaccgattttttaaaattcaaggacgaatttgaggtattagtc 31236819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 48 - 268
Target Start/End: Complemental strand, 42134713 - 42134492
Alignment:
Q  48 ttttaccatttccatcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacacagcatgcaaga-gatacgtcatcaccactaa 146  Q
    |||| ||| ||| ||||| |||||||||| ||| |||||| |||| ||| ||||||||||||||||||||||||||| |  || | |||| ||   ||||    
T  42134713 tttttccaattcaatcaaattagtccttgaacatgtggcttccttcttgccacgtgtacaagacaacacagcatgcagggtgacatgtcaacatggctaa 42134614  T
Q  147 cggaggttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatattttgcaaaattcagagacgaatttggccgattttt 246  Q
    |||||   ||||||||||||||| ||||||||||||||||  ||||||||||||||| | ||||||| ||| |||| || || || |||||||||    |    
T  42134613 cggagcacttggacggagggacctttttgatggacgtctgacaaattcagggactaagttgatatttcgcataattgagggatgattttggccgacccgt 42134514  T
Q  247 taaaattcagggacgaatttga 268  Q
     |||||||| ||||||||||||    
T  42134513 aaaaattcaaggacgaatttga 42134492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 189 - 277
Target Start/End: Complemental strand, 50554252 - 50554164
Alignment:
Q  189 aaattcagggactaaatagatattttgcaaaattcagagacgaatttggccgattttttaaaattcagggacgaatttgaggtattagt 277  Q
    ||||||||| ||||||||| |||||| |||||||||| |||||||||| |||||||||||||||||| |||||||||||||||||||||    
T  50554252 aaattcaggaactaaatagctattttacaaaattcagggacgaatttgaccgattttttaaaattcaaggacgaatttgaggtattagt 50554164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 144 - 279
Target Start/End: Original strand, 47013072 - 47013207
Alignment:
Q  144 taacggaggttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatattttgcaaaattcagagacgaatttggccgatt 243  Q
    |||||||  ||||||||||||||||   |||||||||||| || |||||||||||||||| | ||||||| | ||||||||| |||||| ||| ||||||    
T  47013072 taacggacattttggacggagggactgatttgatggacgtttgcaaaattcagggactaatttgatatttcgaaaaattcagggacgaaattgtccgatt 47013171  T
Q  244 ttttaaaattcagggacgaatttgaggtattagtct 279  Q
    ||| |||||||| |||| | ||||||||||||||||    
T  47013172 tttcaaaattcaaggactattttgaggtattagtct 47013207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 15 - 86
Target Start/End: Original strand, 51896045 - 51896116
Alignment:
Q  15 ggaaaaattatactgaaaagttaagtctcgaatttttaccatttccatcaatttagtccttgtacacgtggc 86  Q
    |||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  51896045 ggaaaaattacactgaaaagttaaatctcgaatttttaccatttccatcaatttagtccttgtacacgtggc 51896116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 189 - 278
Target Start/End: Original strand, 8169568 - 8169657
Alignment:
Q  189 aaattcagggactaaatagatattttgcaaaattcagagacgaatttggccgattttttaaaattcagggacgaatttgaggtattagtc 278  Q
    ||||||||||||||| | ||||||||| ||||||||| |||||| ||||||||||||| |||||||| ||||||||||||||||||||||    
T  8169568 aaattcagggactaatttgatattttgtaaaattcagggacgaaattggccgatttttcaaaattcaaggacgaatttgaggtattagtc 8169657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 189 - 279
Target Start/End: Complemental strand, 46582099 - 46582009
Alignment:
Q  189 aaattcagggactaaatagatattttgcaaaattcagagacgaatttggccgattttttaaaattcagggacgaatttgaggtattagtct 279  Q
    ||||||||||||||| | ||||||| ||||||||||| |||||| ||||||||||||| |||||||| |||| ||||||||||||||||||    
T  46582099 aaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccgatttttcaaaattcaaggacaaatttgaggtattagtct 46582009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 197 - 279
Target Start/End: Complemental strand, 52641969 - 52641887
Alignment:
Q  197 ggactaaatagatattttgcaaaattcagagacgaatttggccgattttttaaaattcagggacgaatttgaggtattagtct 279  Q
    |||||||||| |||||| ||||||||||| |||||||||||| ||||||| |||||||| |||||||||||||||||||||||    
T  52641969 ggactaaatatatatttcgcaaaattcagggacgaatttggctgatttttgaaaattcaaggacgaatttgaggtattagtct 52641887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 189 - 278
Target Start/End: Complemental strand, 26223676 - 26223587
Alignment:
Q  189 aaattcagggactaaatagatattttgcaaaattcagagacgaatttggccgattttttaaaattcagggacgaatttgaggtattagtc 278  Q
    ||||||||||||||| | ||||||| ||||||||||| |||||| ||| ||||||||| |||||||| ||||||||||||||||||||||    
T  26223676 aaattcagggactaatttgatatttcgcaaaattcagggacgaaattgaccgatttttcaaaattcaaggacgaatttgaggtattagtc 26223587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 189 - 278
Target Start/End: Complemental strand, 34776658 - 34776569
Alignment:
Q  189 aaattcagggactaaatagatattttgcaaaattcagagacgaatttggccgattttttaaaattcagggacgaatttgaggtattagtc 278  Q
    ||||||||||||||| | ||||||| | ||||||||| |||||| ||||||||||||| |||||||| ||||||||||||||||||||||    
T  34776658 aaattcagggactaatttgatatttcgtaaaattcagggacgaaattggccgatttttcaaaattcaaggacgaatttgaggtattagtc 34776569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 210 - 277
Target Start/End: Complemental strand, 6816933 - 6816866
Alignment:
Q  210 attttgcaaaattcagagacgaatttggccgattttttaaaattcagggacgaatttgaggtattagt 277  Q
    |||||||||||||||| |||||||||| |||||||||||||||||| |||||||||||||||||||||    
T  6816933 attttgcaaaattcagggacgaatttgaccgattttttaaaattcaaggacgaatttgaggtattagt 6816866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 189 - 275
Target Start/End: Complemental strand, 3011944 - 3011858
Alignment:
Q  189 aaattcagggactaaatagatattttgcaaaattcagagacgaatttggccgattttttaaaattcagggacgaatttgaggtatta 275  Q
    |||||||| |||||||||||||||| |||||||||||  ||||||||| | |||||||||||||| | |||||||||||||||||||    
T  3011944 aaattcagagactaaatagatatttcgcaaaattcaggaacgaatttgactgattttttaaaatttaaggacgaatttgaggtatta 3011858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 189 - 275
Target Start/End: Complemental strand, 51894656 - 51894570
Alignment:
Q  189 aaattcagggactaaatagatattttgcaaaattcagagacgaatttggccgattttttaaaattcagggacgaatttgaggtatta 275  Q
    |||||||||||||||||| |||||| ||||||||||||||| |||||| || ||||||||||||||| | |||||||||| ||||||    
T  51894656 aaattcagggactaaatatatatttcgcaaaattcagagacaaatttgacccattttttaaaattcaagaacgaatttgatgtatta 51894570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 189 - 278
Target Start/End: Complemental strand, 25276831 - 25276742
Alignment:
Q  189 aaattcagggactaaatagatattttgcaaaattcagagacgaatttggccgattttttaaaattcagggacgaatttgaggtattagtc 278  Q
    ||||||||||||||| | ||||||| ||||||||||  || ||| ||||||||||||| |||||||| ||||||||||||||||||||||    
T  25276831 aaattcagggactaatttgatatttcgcaaaattcaaggatgaaattggccgatttttcaaaattcaaggacgaatttgaggtattagtc 25276742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 197 - 278
Target Start/End: Original strand, 37088144 - 37088225
Alignment:
Q  197 ggactaaatagatattttgcaaaattcagagacgaatttggccgattttttaaaattcagggacgaatttgaggtattagtc 278  Q
    |||| |||||| ||||| |||||||||||  |||||||||||||||||||||||||||| ||| ||||||||||||||||||    
T  37088144 ggacaaaatagctatttcgcaaaattcaggaacgaatttggccgattttttaaaattcaaggaagaatttgaggtattagtc 37088225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 189 - 278
Target Start/End: Original strand, 37345962 - 37346051
Alignment:
Q  189 aaattcagggactaaatagatattttgcaaaattcagagacgaatttggccgattttttaaaattcagggacgaatttgaggtattagtc 278  Q
    ||||||||||||||| | ||||||| ||||||||||| || ||| |||| |||||||| |||||||| ||||||||||||||||||||||    
T  37345962 aaattcagggactaatttgatatttcgcaaaattcagggatgaaattggtcgatttttcaaaattcaaggacgaatttgaggtattagtc 37346051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 48 - 236
Target Start/End: Original strand, 45380877 - 45381066
Alignment:
Q  48 ttttaccatttccatcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacacagcatgca-agagatacgtcatcaccactaa 146  Q
    |||| ||| ||| ||||| |||||||||| |||||||||| |||| ||| |||||||||||||||||||||||||||  | || | |||| ||   ||||    
T  45380877 tttttccaattcaatcaaattagtccttgaacacgtggcttccttcttgccacgtgtacaagacaacacagcatgcagggcgacatgtcaccatggctaa 45380976  T
Q  147 cggaggttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatattttgcaaaattcagagacgaatttg 236  Q
    |||||   ||||||||||| ||| ||||||||||||||||  ||||||| | ||||| | ||||||| ||| |||| || || |||||||    
T  45380977 cggagcacttggacggaggaacctttttgatggacgtctgacaaattcatgaactaagttgatatttcgcataattgagggatgaatttg 45381066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 45 - 195
Target Start/End: Complemental strand, 43868848 - 43868697
Alignment:
Q  45 aatttttaccatttccatcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacacagcatgcaaga-gatacgtcatcaccac 143  Q
    |||||||| | |||||||||| || ||||||||||||||| || |||||| ||||||||||||||||||||   |||||| || || |  ||| || |||    
T  43868848 aatttttagcgtttccatcaaattggtccttgtacacgtgacttccttgtagacacgtgtacaagacaacatgacatgcatgacgacaactcagcagcac 43868749  T
Q  144 taacggaggttttggacggagggaccattttgatggacgtctgtaaaattca 195  Q
    ||||||||  |||||||||| |||| ||||||||||| || ||| |||||||    
T  43868748 taacggagcatttggacggaaggactattttgatggatgtttgttaaattca 43868697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 189 - 279
Target Start/End: Original strand, 2871076 - 2871166
Alignment:
Q  189 aaattcagggactaaatagatattttgcaaaattcagagacgaatttggccgattttttaaaattcagggacgaatttgaggtattagtct 279  Q
    |||||||  ||| |||||| ||||| ||||||||||| ||||||||| |||||||||| |||||||| ||||||||||||| |||||||||    
T  2871076 aaattcaaagacaaaatagctatttcgcaaaattcagggacgaatttagccgatttttaaaaattcaaggacgaatttgagatattagtct 2871166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 198 - 278
Target Start/End: Complemental strand, 25278934 - 25278854
Alignment:
Q  198 gactaaatagatattttgcaaaattcagagacgaatttggccgattttttaaaattcagggacgaatttgaggtattagtc 278  Q
    |||||||||||||||| ||||||||||| ||| |||||| | ||||||| |||||||| ||| ||||||||||||||||||    
T  25278934 gactaaatagatatttcgcaaaattcagggacaaatttgactgatttttgaaaattcaaggatgaatttgaggtattagtc 25278854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 61 - 268
Target Start/End: Original strand, 36895416 - 36895624
Alignment:
Q  61 atcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacacagcatgcaaga-gatacgtcatcaccactaacggaggttttgga 159  Q
    ||||| || |||| || |||||||||| |||| ||| |||| ||||||||||||||| ||||||||| || |  ||| ||   |||||||||   |||||    
T  36895416 atcaaattcgtccctgaacacgtggcttccttcttgccacgcgtacaagacaacacaacatgcaagacgacagatcagcatggctaacggagcacttgga 36895515  T
Q  160 cggagggaccattttgatggacgtctgtaaaattcagggactaaatagatattttgcaaaattcagagacgaatttggccgattttttaaaattcaggga 259  Q
    || ||||||| ||||||||||||||||  ||||||||||||||| | ||||||| ||| |||| |  |||||| ||| ||||    | ||||||||||||    
T  36895516 cgaagggacctttttgatggacgtctgacaaattcagggactaagttgatatttcgcataattgatggacgaagttgaccgacgcgtgaaaattcaggga 36895615  T
Q  260 cgaatttga 268  Q
    | |||||||    
T  36895616 caaatttga 36895624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 189 - 279
Target Start/End: Original strand, 1444181 - 1444271
Alignment:
Q  189 aaattcagggactaaatagatattttgcaaaattcagagacgaatttggccgattttttaaaattcagggacgaatttgaggtattagtct 279  Q
    ||||||||||||||| | ||||||||| ||||||||| ||| || ||||||||||||| |||||| | |||| | ||||||||||||||||    
T  1444181 aaattcagggactaatttgatattttgaaaaattcagggacaaaattggccgatttttcaaaatttaaggactattttgaggtattagtct 1444271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 189 - 278
Target Start/End: Complemental strand, 4854499 - 4854410
Alignment:
Q  189 aaattcagggactaaatagatattttgcaaaattcagagacgaatttggccgattttttaaaattcagggacgaatttgaggtattagtc 278  Q
    ||||||||||||||| | ||| ||| ||||||||||| |||||| |||  |||||||| |||||||| |||||||||||| |||||||||    
T  4854499 aaattcagggactaatttgatctttcgcaaaattcagggacgaaattgaacgatttttcaaaattcaaggacgaatttgaagtattagtc 4854410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 189 - 278
Target Start/End: Complemental strand, 9120128 - 9120039
Alignment:
Q  189 aaattcagggactaaatagatattttgcaaaattcagagacgaatttggccgattttttaaaattcagggacgaatttgaggtattagtc 278  Q
    ||||||||||||||| | ||||||| | ||||||||| |||||| ||| ||||||||| |||||||| |||| | |||||||||||||||    
T  9120128 aaattcagggactaatttgatatttcgaaaaattcagggacgaaattgaccgatttttcaaaattcaaggactattttgaggtattagtc 9120039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 189 - 278
Target Start/End: Original strand, 27089279 - 27089368
Alignment:
Q  189 aaattcagggactaaatagatattttgcaaaattcagagacgaatttggccgattttttaaaattcagggacgaatttgaggtattagtc 278  Q
    ||||||||||| ||| | |||||||  |||||||||  |||||| || |||||||||| |||||||| ||||||||||||||||||||||    
T  27089279 aaattcagggattaatttgatatttcacaaaattcaaggacgaaatttgccgatttttcaaaattcaaggacgaatttgaggtattagtc 27089368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 210 - 279
Target Start/End: Complemental strand, 33599255 - 33599186
Alignment:
Q  210 attttgcaaaattcagagacgaatttggccgattttttaaaattcagggacgaatttgaggtattagtct 279  Q
    ||||| |||||||||  |||||||||| ||||||||| |||||||| |||||||||||||||||||||||    
T  33599255 atttttcaaaattcaaggacgaatttgcccgatttttcaaaattcaaggacgaatttgaggtattagtct 33599186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 61 - 268
Target Start/End: Complemental strand, 31801851 - 31801643
Alignment:
Q  61 atcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacacagcatgcaaga-gatacgtcatcaccactaacggaggttttgga 159  Q
    ||||| || |||| || ||||||| || |||| ||| |||| ||||||||||||||| ||||||||| || |  ||| ||   |||||||||   |||||    
T  31801851 atcaaattcgtccctgaacacgtgacttccttcttgccacgcgtacaagacaacacaacatgcaagacgacaaatcagcatggctaacggagcacttgga 31801752  T
Q  160 cggagggaccattttgatggacgtctgtaaaattcagggactaaatagatattttgcaaaattcagagacgaatttggccgattttttaaaattcaggga 259  Q
    |||||||||| |||||||||||||||   ||||| | ||||||| | ||||||| ||| |||| || |||||| ||| ||||  | | |||||| |||||    
T  31801751 cggagggacctttttgatggacgtctcacaaatttaaggactaagttgatatttcgcataattgagggacgaagttgaccgacgtgtgaaaatttaggga 31801652  T
Q  260 cgaatttga 268  Q
    |||||||||    
T  31801651 cgaatttga 31801643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 61 - 268
Target Start/End: Original strand, 46638713 - 46638921
Alignment:
Q  61 atcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacacagcatgcaaga-gatacgtcatcaccactaacggaggttttgga 159  Q
    ||||| || |||| || |||||||||| |||| ||| |||| ||||||||||||||| ||||||||  || |  ||| ||   |||||||||   |||||    
T  46638713 atcaaattcgtccctgaacacgtggcttcctttttgccacgcgtacaagacaacacaacatgcaaggcgacagatcagcatggctaacggagcacttgga 46638812  T
Q  160 cggagggaccattttgatggacgtctgtaaaattcagggactaaatagatattttgcaaaattcagagacgaatttggccgattttttaaaattcaggga 259  Q
    |||||||||| ||||| ||||||||||  ||||||| ||||||| | ||||||| ||| |||| || || ||| ||||||||    | |||||||||| |    
T  46638813 cggagggacctttttggtggacgtctgacaaattcaaggactaagttgatatttcgcataattgagggatgaagttggccgacgcgtgaaaattcaggaa 46638912  T
Q  260 cgaatttga 268  Q
    |||||||||    
T  46638913 cgaatttga 46638921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 189 - 278
Target Start/End: Complemental strand, 47011545 - 47011456
Alignment:
Q  189 aaattcagggactaaatagatattttgcaaaattcagagacgaatttggccgattttttaaaattcagggacgaatttgaggtattagtc 278  Q
    ||||||||||||||| | ||||||| | ||||||||  |||||| ||| ||||||||| |||||||| |||| | |||||||||||||||    
T  47011545 aaattcagggactaatttgatatttcgaaaaattcatggacgaaattgtccgatttttcaaaattcaaggactattttgaggtattagtc 47011456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 218 - 278
Target Start/End: Complemental strand, 45045009 - 45044949
Alignment:
Q  218 aaattcagagacgaatttggccgattttttaaaattcagggacgaatttgaggtattagtc 278  Q
    |||||||| |||||||| | || ||||||||||||||| ||||||||||||||||||||||    
T  45045009 aaattcagggacgaattggaccaattttttaaaattcaaggacgaatttgaggtattagtc 45044949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 48 - 123
Target Start/End: Original strand, 18183837 - 18183912
Alignment:
Q  48 ttttaccatttccatcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacacagcatgc 123  Q
    |||| ||| ||||||||| |||||||||| |||||||||| | || ||| |||||||||||||||||||| |||||    
T  18183837 tttttccacttccatcaaattagtccttgaacacgtggcttcttttttgccacgtgtacaagacaacacaacatgc 18183912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 26 - 88
Target Start/End: Complemental strand, 1442733 - 1442671
Alignment:
Q  26 actgaaaagttaagtctcgaatttttaccatttccatcaatttagtccttgtacacgtggctg 88  Q
    ||||||| ||||| | ||||||||| || |||||||||| |||||||||||||||||||||||    
T  1442733 actgaaatgttaaatatcgaattttgacaatttccatcagtttagtccttgtacacgtggctg 1442671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 189 - 267
Target Start/End: Complemental strand, 33599307 - 33599229
Alignment:
Q  189 aaattcagggactaaatagatattttgcaaaattcagagacgaatttggccgattttttaaaattcagggacgaatttg 267  Q
    |||||||| || ||| | ||||||| ||||||||||  |||||||||| ||||||||| |||||||| |||||||||||    
T  33599307 aaattcagagattaatttgatatttcgcaaaattcatggacgaatttgaccgatttttcaaaattcaaggacgaatttg 33599229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 159 - 236
Target Start/End: Complemental strand, 27940727 - 27940650
Alignment:
Q  159 acggagggaccattttgatggacgtctgtaaaattcagggactaaatagatattttgcaaaattcagagacgaatttg 236  Q
    ||||||||||| ||||||||||||||||  ||||||| ||| ||||| ||||||| ||| |||| || ||||||||||    
T  27940727 acggagggacctttttgatggacgtctgataaattcaaggattaaattgatatttcgcataattgagggacgaatttg 27940650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 43 - 124
Target Start/End: Original strand, 33685137 - 33685218
Alignment:
Q  43 cgaatttttaccatttccatcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacacagcatgca 124  Q
    |||| |||| ||| ||| ||||| |||||||||| |||||||||| |||| ||| ||||||||||||||||| || ||||||    
T  33685137 cgaactttttccaattcaatcaaattagtccttgaacacgtggcttccttcttgccacgtgtacaagacaactcaacatgca 33685218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 214 - 277
Target Start/End: Complemental strand, 1442614 - 1442551
Alignment:
Q  214 tgcaaaattcagagacgaatttggccgattttttaaaattcagggacgaatttgaggtattagt 277  Q
    |||||||||||| |||||| ||||||||||||| |||||||| |||| | | ||||||||||||    
T  1442614 tgcaaaattcagggacgaaattggccgatttttcaaaattcaaggactattgtgaggtattagt 1442551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 61 - 124
Target Start/End: Complemental strand, 6575408 - 6575345
Alignment:
Q  61 atcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacacagcatgca 124  Q
    ||||| |||||||||| |||||||||| |||| ||| |||| ||||||||||||| ||||||||    
T  6575408 atcaaattagtccttgaacacgtggcttccttcttgccacgcgtacaagacaacaaagcatgca 6575345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 48 - 241
Target Start/End: Complemental strand, 44157663 - 44157470
Alignment:
Q  48 ttttaccatttccatcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacacagcatgca-agagatacgtcatcaccactaa 146  Q
    |||| ||| ||| ||||| |||||| ||| |||||||||| |||| ||| |||||||||||||||||||| ||||||  | || | ||||  |   || |    
T  44157663 tttttccaattcaatcaaattagtc-ttgaacacgtggcttccttcttgccacgtgtacaagacaacacaacatgcagggcgacatgtcactatggctga 44157565  T
Q  147 cggaggttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatattttgcaaaattcagagacgaatttggccga 241  Q
    |||||   || |||||| ||||  |||| ||||||||||   ||||||||||||||| | ||||||||||| |||| || || ||||||||||||    
T  44157564 cggagcacttagacggaaggactttttttatggacgtctaacaaattcagggactaagttgatattttgcataattgagggatgaatttggccga 44157470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 144 - 205
Target Start/End: Complemental strand, 1442655 - 1442594
Alignment:
Q  144 taacggaggttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaat 205  Q
    |||||||  ||||||||||||||||   ||||||||||||||| ||||||||||||| ||||    
T  1442655 taacggacattttggacggagggactgatttgatggacgtctgcaaaattcagggacgaaat 1442594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 56 - 117
Target Start/End: Complemental strand, 5783566 - 5783505
Alignment:
Q  56 tttccatcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacaca 117  Q
    |||||||||||||||||| |||||||||||||  ||| ||  |||||||||||| |||||||    
T  5783566 tttccatcaatttagtccctgtacacgtggctttctttttcccacgtgtacaagccaacaca 5783505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 159 - 268
Target Start/End: Original strand, 47269461 - 47269570
Alignment:
Q  159 acggagggaccattttgatggacgtctgtaaaattcagggactaaatagatattttgcaaaattcagagacgaatttggccgattttttaaaattcaggg 258  Q
    ||||||||||| ||||||||||||| ||  |||||||||||  |||| || |||| | | |||| || ||| |||||||||||    | |||||||||||    
T  47269461 acggagggacctttttgatggacgtttgacaaattcagggatgaaattgaaatttcgtataattgagggactaatttggccgacgcgtgaaaattcaggg 47269560  T
Q  259 acgaatttga 268  Q
    ||||||||||    
T  47269561 acgaatttga 47269570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 141 - 268
Target Start/End: Complemental strand, 5783501 - 5783374
Alignment:
Q  141 cactaacggaggttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatattttgcaaaattcagagacgaatttggccg 240  Q
    ||||||||||  |||||||||||||||| |  ||||||||||||    ||||||||||||||  | ||||||| |  |||||  |||| |||||||||||    
T  5783501 cactaacggaccttttggacggagggacgaaattgatggacgtcaaacaaattcagggactattttgatatttcgttaaattgggagatgaatttggccg 5783402  T
Q  241 attttttaaaattcagggacgaatttga 268  Q
    |    | |||||||||||||||| ||||    
T  5783401 acccctaaaaattcagggacgaaattga 5783374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 189 - 268
Target Start/End: Original strand, 44159296 - 44159375
Alignment:
Q  189 aaattcagggactaaatagatattttgcaaaattcagagacgaatttggccgattttttaaaattcagggacgaatttga 268  Q
    ||||||||| | ||||| ||||||||||| |||| || |||||| ||| ||||| | | |||||||||||||||| ||||    
T  44159296 aaattcaggaattaaattgatattttgcataattaagggacgaaattgaccgatctgtgaaaattcagggacgaagttga 44159375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 279 - 309
Target Start/End: Original strand, 1953919 - 1953949
Alignment:
Q  279 tatcatatttcttttaatttcttcttataca 309  Q
    |||||||||||||||||||||||||||||||    
T  1953919 tatcatatttcttttaatttcttcttataca 1953949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 26 - 80
Target Start/End: Original strand, 9121580 - 9121634
Alignment:
Q  26 actgaaaagttaagtctcgaatttttaccatttccatcaatttagtccttgtaca 80  Q
    ||||||| ||||| | ||||||||| || |||||||||| |||||||||||||||    
T  9121580 actgaaatgttaaatatcgaattttgacaatttccatcagtttagtccttgtaca 9121634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 163 - 241
Target Start/End: Original strand, 18183952 - 18184030
Alignment:
Q  163 agggaccattttgatggacgtctgtaaaattcagggactaaatagatattttgcaaaattcagagacgaatttggccga 241  Q
    ||||||  ||||||||||||||||  ||||||||||||||| | ||||||| ||| |||| || || || |||||||||    
T  18183952 agggacatttttgatggacgtctgacaaattcagggactaagttgatatttcgcataattgagggatgattttggccga 18184030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 26 - 88
Target Start/End: Original strand, 47012994 - 47013056
Alignment:
Q  26 actgaaaagttaagtctcgaatttttaccatttccatcaatttagtccttgtacacgtggctg 88  Q
    ||||||| ||||| | || |||||| || |||||||||| |||||||| ||||||||||||||    
T  47012994 actgaaatgttaaatatcaaattttgacaatttccatcagtttagtccctgtacacgtggctg 47013056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 155 - 268
Target Start/End: Original strand, 35479976 - 35480089
Alignment:
Q  155 ttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatattttgcaaaattcagagacgaatttggccgattttttaaaattc 254  Q
    ||||||||| ||||| ||||||||||||||||  |||||||  || ||| | ||||||| ||| |||| || || ||||||||| |||   | |||||||    
T  35479976 ttggacggaaggacctttttgatggacgtctgacaaattcatagattaagttgatatttcgcataattgagggatgaatttggctgatccgtgaaaattc 35480075  T
Q  255 agggacgaatttga 268  Q
    | ||||||| ||||    
T  35480076 aaggacgaagttga 35480089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 189 - 241
Target Start/End: Original strand, 27952502 - 27952554
Alignment:
Q  189 aaattcagggactaaatagatattttgcaaaattcagagacgaatttggccga 241  Q
    ||||||||||| ||||| ||||||| ||| |||| || |||||||||||||||    
T  27952502 aaattcagggattaaattgatatttcgcataattgagggacgaatttggccga 27952554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 189 - 241
Target Start/End: Complemental strand, 35478176 - 35478124
Alignment:
Q  189 aaattcagggactaaatagatattttgcaaaattcagagacgaatttggccga 241  Q
    ||||||||||| ||||| ||||||||||| |||| || ||| |||||||||||    
T  35478176 aaattcagggattaaattgatattttgcataattgagggactaatttggccga 35478124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 211; Significance: 1e-115; HSPs: 66)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 211; E-Value: 1e-115
Query Start/End: Original strand, 16 - 278
Target Start/End: Complemental strand, 16763338 - 16763076
Alignment:
Q  16 gaaaaattatactgaaaagttaagtctcgaatttttaccatttccatcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaaca 115  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  16763338 gaaaaattatactgaaaagttaagtctcgaatttttaccattttcatcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaaaa 16763239  T
Q  116 cagcatgcaagagatacgtcatcaccactaacggaggttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatattttg 215  Q
    || |||||||| || |||||||| |||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  16763238 caacatgcaagggacacgtcatcgccactaacagagattttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatatttcg 16763139  T
Q  216 caaaattcagagacgaatttggccgattttttaaaattcagggacgaatttgaggtattagtc 278  Q
    |||||||||| |||||||||| ||||||||| |||||||| ||||||||||||||||||||||    
T  16763138 caaaattcagggacgaatttgaccgatttttaaaaattcaaggacgaatttgaggtattagtc 16763076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 14 - 280
Target Start/End: Original strand, 19908125 - 19908393
Alignment:
Q  14 aggaaaaattatactgaaaagttaagtctcgaatttttaccatttccatcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaa 113  Q
    ||||||||||| | |||||||| || |||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||| |||||    
T  19908125 aggaaaaattacattgaaaagtcaaatctcgaatttttaccatttccatcaaattagtccttgtacacgtggctgtcttgttgacacgtgtacatgacaa 19908224  T
Q  114 cacagcatgcaagag-atacgtcatcaccactaacggaggttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatatt 212  Q
    ||||||||||||||| | ||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||    
T  19908225 cacagcatgcaagaggacacgtcatcaccactaacggagcttttggacggagggaccattttgacggacgtctgtaaaattcaaggactaaatagatatt 19908324  T
Q  213 ttgcaaaattcagagacgaatttggccga-ttttttaaaattcagggacgaatttgaggtattagtcta 280  Q
    | ||||||||||| ||| ||||||||||| |||||||||||||| ||||||||||||||||||||||||    
T  19908325 tcgcaaaattcagggactaatttggccgatttttttaaaattcaaggacgaatttgaggtattagtcta 19908393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 14 - 280
Target Start/End: Complemental strand, 17696471 - 17696204
Alignment:
Q  14 aggaaaaattatactgaaaagttaagtctcgaatttttaccatttccatcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaa 113  Q
    ||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||    
T  17696471 aggaaaaattacactgaaaagttaaatctcgaatttttaccatttccatcaatttagtccttgtacacatggctgccttgttgacacgtgtacaggacaa 17696372  T
Q  114 cacagcatgcaaga-gatacgtcatcaccactaacggaggttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatatt 212  Q
    |||| ||||||||| || || |||||||||||||||||| |||||||||||| |||||||||||| ||||| ||||||||||||||||||||||||||||    
T  17696371 cacaacatgcaagatgacacatcatcaccactaacggagcttttggacggagtgaccattttgattgacgtttgtaaaattcagggactaaatagatatt 17696272  T
Q  213 ttgcaaaattcagagacgaatttggccgattttttaaaattcagggacgaatttgaggtattagtcta 280  Q
    || |||||||||| || ||||||||||||||||| |||||||| ||||||||||||||||||| ||||    
T  17696271 ttccaaaattcagggatgaatttggccgatttttgaaaattcaaggacgaatttgaggtattaatcta 17696204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 14 - 278
Target Start/End: Original strand, 44709624 - 44709889
Alignment:
Q  14 aggaaaaattatactgaaaagttaagtctcgaatttttaccatttccatcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaa 113  Q
    ||||||||||||||||||||||||| | || ||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||    
T  44709624 aggaaaaattatactgaaaagttaaatttcaaatttttaccatttccatcaatttagtccttgtacacgtggatgtcttgttgacacgtgtacaagacaa 44709723  T
Q  114 cacagcatgcaagag-atacgtcatcaccactaacggaggttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatatt 212  Q
    |||| |||||||||| | |  ||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  44709724 cacaacatgcaagaggacatatcatcaccactaacgaagcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagttatt 44709823  T
Q  213 ttgcaaaattcagagacgaatttggccgattttttaaaattcagggacgaatttgaggtattagtc 278  Q
    | ||||||||||| | |||||||||||| |||||||||||||| ||||||||||||||||||||||    
T  44709824 tcgcaaaattcagggccgaatttggccggttttttaaaattcaaggacgaatttgaggtattagtc 44709889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 16 - 278
Target Start/End: Original strand, 39664629 - 39664892
Alignment:
Q  16 gaaaaattatactgaaaagttaagtctcgaatttttaccatttccatcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaaca 115  Q
    ||||||||| |  ||||||| || |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||    
T  39664629 gaaaaattacatggaaaagtcaaatctcgaatttttaccatttccatcaaattagtccttgtacacgtggctgccttgttgacacgtgtacatgacaaca 39664728  T
Q  116 cagcatgcaagag-atacgtcatcaccactaacggaggttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatatttt 214  Q
    ||||  ||||||| | || |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  39664729 cagctagcaagaggacacatcatcaccactaacggagcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatatttc 39664828  T
Q  215 gcaaaattcagagacgaatttggccgattttttaaaattcagggacgaatttgaggtattagtc 278  Q
    | ||||||| | ||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  39664829 gtaaaattcggggacgaatttggccgattttttaaaattcaaggacgaatttgaggtattagtc 39664892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 16 - 278
Target Start/End: Complemental strand, 40560486 - 40560223
Alignment:
Q  16 gaaaaattatactgaaaagttaagtctcgaatttttaccatttccatcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaaca 115  Q
    ||||||||| ||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||    
T  40560486 gaaaaattacactgaaaagttaaatcttgaatttttaccatttccatcaatttagtccttgtacacgtggctgccttgttgacacgcgtacatgacaaca 40560387  T
Q  116 cagcatgcaagag-atacgtcatcaccactaacggaggttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatatttt 214  Q
    ||||||||||||| | || |||||||||||||| ||  |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||     
T  40560386 cagcatgcaagaggacacatcatcaccactaacagaacttttggacggagggactattttgatggacgtctgtaaaattcagggactaaatagatatttc 40560287  T
Q  215 gcaaaattcagagacgaatttggccgattttttaaaattcagggacgaatttgaggtattagtc 278  Q
    ||||||||||| |||||||||||| ||||||||||||||||  ||||||||||| |||||||||    
T  40560286 gcaaaattcagggacgaatttggctgattttttaaaattcaaagacgaatttgaagtattagtc 40560223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 181; E-Value: 8e-98
Query Start/End: Original strand, 15 - 278
Target Start/End: Original strand, 14388964 - 14389228
Alignment:
Q  15 ggaaaaattatactgaaaagttaagtctcgaatttttaccatttccatcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaac 114  Q
    |||||||||| ||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||    
T  14388964 ggaaaaattacactgaaaagttaaatctcgaatttttaccatttccatcaagttagtccttgtacacgtggctgccttattgacacgtgtacaagacaac 14389063  T
Q  115 acagcatgcaagag-atacgtcatcaccactaacggaggttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatattt 213  Q
    ||| |||||||||| | || ||||||| ||||||| |  ||||||||||||||||||||||||||||| | || ||||||||||||||||||||||||||    
T  14389064 acaacatgcaagaggacacatcatcactactaacgaaacttttggacggagggaccattttgatggacatttggaaaattcagggactaaatagatattt 14389163  T
Q  214 tgcaaaattcagagacgaatttggccgattttttaaaattcagggacgaatttgaggtattagtc 278  Q
     ||||||||||| |||||||||||||||||||| ||||||||  |||||||||||||||||||||    
T  14389164 cgcaaaattcagggacgaatttggccgatttttgaaaattcaatgacgaatttgaggtattagtc 14389228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 176; E-Value: 8e-95
Query Start/End: Original strand, 14 - 274
Target Start/End: Original strand, 42519083 - 42519346
Alignment:
Q  14 aggaaaaattatactgaaaa-gttaagtctcgaatttttaccatttccatcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagaca 112  Q
    ||||||||||| |||||||| ||||| ||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||    
T  42519083 aggaaaaattacactgaaaaagttaaatcttgaatttttaccatttccatcaatttagtccttgtacacgtgactgccttgttgacacgtgtacaggaca 42519182  T
Q  113 acacagcatgcaaga-gatacgtcatcaccactaacggaggttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatat 211  Q
    ||||||||||||||| || || |||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42519183 acacagcatgcaagaggacacatcatcaccactaacggagcttttggatggagggaccattttgatggacgtctgtaaaattcagggactaaatagatat 42519282  T
Q  212 tttgc-aaaattcagagacgaatttggccgattttttaaaattcagggacgaatttgaggtatt 274  Q
    ||||| ||||||||  ||| ||||||  | ||||||||||||||| ||||||||||||||||||    
T  42519283 tttgcaaaaattcaaggactaatttgatcaattttttaaaattcaaggacgaatttgaggtatt 42519346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 170; E-Value: 3e-91
Query Start/End: Original strand, 14 - 278
Target Start/End: Complemental strand, 2767199 - 2766934
Alignment:
Q  14 aggaaaaattatactgaaaagttaagtctcgaatttttaccatttccatcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaa 113  Q
    ||||||||||||||||||||||||| |||||||||||||| ||||||||||||||| ||| |||||||||| |||||||||| ||||||||||| |||||    
T  2767199 aggaaaaattatactgaaaagttaaatctcgaatttttactatttccatcaatttaatccatgtacacgtgactgccttgttaacacgtgtacaggacaa 2767100  T
Q  114 cacagcatgcaagag-atacgtcatcaccactaacggaggttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatatt 212  Q
    |||| ||| |||||| | || |||||||||||||||||| |||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  2767099 cacaacatacaagaggacacatcatcaccactaacggagcttttggacagagggaccattttgatagacgtctgtaaaattcagggactaaatagatatt 2767000  T
Q  213 ttgcaaaattcagagacgaatttggccgattttttaaaattcagggacgaatttgaggtattagtc 278  Q
    | ||||||||||  ||||| |||| ||||||||| |||||||| ||||||||||||| ||||||||    
T  2766999 tcgcaaaattcaaggacgagtttgaccgatttttaaaaattcaaggacgaatttgagctattagtc 2766934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 170; E-Value: 3e-91
Query Start/End: Original strand, 14 - 278
Target Start/End: Complemental strand, 6797772 - 6797507
Alignment:
Q  14 aggaaaaattatactgaaaagttaagtctcgaatttttaccatttccatcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaa 113  Q
    ||||||||||| ||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6797772 aggaaaaattacactgaaaagttaaatctcgaatttttaccattttcatcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaa 6797673  T
Q  114 cacagcatgcaaga-gatacgtcatcaccactaacggaggttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatatt 212  Q
    |||| ||||||||| ||||| ||||||||  |||| ||| ||||||||||||| ||||||||||| ||||||||||||||| ||||||||||||||||||    
T  6797672 cacatcatgcaagaggatacatcatcacccgtaacagagcttttggacggaggaaccattttgatagacgtctgtaaaattaagggactaaatagatatt 6797573  T
Q  213 ttgcaaaattcagagacgaatttggccgattttttaaaattcagggacgaatttgaggtattagtc 278  Q
    | |||||||||||  |||||||| ||| |||||||||||||||   | |||||| |||||||||||    
T  6797572 tcgcaaaattcaggaacgaatttagccaattttttaaaattcaaatatgaatttaaggtattagtc 6797507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 160; E-Value: 3e-85
Query Start/End: Original strand, 17 - 278
Target Start/End: Complemental strand, 39455431 - 39455169
Alignment:
Q  17 aaaaattatactgaaaagttaagtctcgaatttttaccatttccatcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacac 116  Q
    |||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||| |||| || ||||||||||||||||||||| ||||||||    
T  39455431 aaaaattacactgaaaagttaaatctcgaatttttaccatttccatcaatttagtccttgtgcacgagggtgccttgttgacacgtgtacatgacaacac 39455332  T
Q  117 agcatgcaaga-gatacgtcatcaccactaacggaggttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatattttg 215  Q
    | ||||||||| |  || ||||| |||||||||||| ||||| |||||| |||||||||||||||||||||||||||||| |||||||||||||||||||    
T  39455331 aacatgcaagagggcacatcatcgccactaacggagcttttgaacggagagaccattttgatggacgtctgtaaaattcatggactaaatagatattttg 39455232  T
Q  216 caaaattcagagac-gaatttggccgattttttaaaattcagggacgaatttgaggtattagtc 278  Q
    |||||||||| ||| ||||||  |||||||||||||||||| |||| |||||||| ||||||||    
T  39455231 caaaattcag-gactgaatttaaccgattttttaaaattcaaggacaaatttgagatattagtc 39455169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 112 - 242
Target Start/End: Original strand, 16377174 - 16377305
Alignment:
Q  112 aacacagcatgcaagagat-acgtcatcaccactaacggaggttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagata 210  Q
    ||||||||||||||||||  ||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||    
T  16377174 aacacagcatgcaagagaacacgtcatcaccactaacggagcttttggacggagggaccattttgatggacgtatgtaaaattcaaggactaaatagata 16377273  T
Q  211 ttttgcaaaattcagagacgaatttggccgat 242  Q
    ||||||||||||||| ||| |||||| |||||    
T  16377274 ttttgcaaaattcagggacaaatttgaccgat 16377305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 45 - 285
Target Start/End: Complemental strand, 37645721 - 37645480
Alignment:
Q  45 aatttttaccatttccatcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacacagcatgcaaga-gatacgtcatcaccac 143  Q
    |||||||||||||||||| || || |||||||||||||||| || |||||||||||||||||| ||||||||||||| ||||| || || |||||| ||     
T  37645721 aatttttaccatttccattaaattggtccttgtacacgtggttgtcttgttgacacgtgtacaggacaacacagcatacaagatgacacatcatcatcaa 37645622  T
Q  144 taacggaggttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatattttgcaaaattcagagacgaatttggccgatt 243  Q
    |||| ||| || ||||||||||||| ||||||||  || |||| |||||||| |||||||||||||||||   |||||| |  |||||||| | | ||||    
T  37645621 taacagagcttatggacggagggacaattttgataaacatctgcaaaattcaaggactaaatagatatttcctaaaatttaaggacgaattcgactgatt 37645522  T
Q  244 ttttaaaattcagggacgaatttgaggtattagtctatcata 285  Q
    ||| |||||||| ||||||| ||| ||||||| |||| ||||    
T  37645521 tttaaaaattcaaggacgaagttggggtattactctaccata 37645480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 60 - 236
Target Start/End: Complemental strand, 7744262 - 7744085
Alignment:
Q  60 catcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacacagcatgca-agagatacgtcatcaccactaacggaggttttgg 158  Q
    ||||||||||||| |||||||||||||| |||| |||||| ||||||| ||||||||| ||| || |||| ||  ||| || ||||||||||  ||||||    
T  7744262 catcaatttagtcattgtacacgtggcttcctttttgacatgtgtacatgacaacacaacatacagagagctaactcagcatcactaacggaccttttgg 7744163  T
Q  159 acggagggaccattttgatggacgtctgtaaaattcagggactaaatagatattttgcaaaattcagagacgaatttg 236  Q
    | ||||||||||||||||||||| |  |  |||||||||||| |||| ||||||| ||||||||  ||||||| ||||    
T  7744162 atggagggaccattttgatggacatgagagaaattcagggacgaaattgatatttcgcaaaattttgagacgattttg 7744085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 56 - 268
Target Start/End: Complemental strand, 17946317 - 17946104
Alignment:
Q  56 tttccatcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacacagcatgcaag-agatacgtcatcaccactaacggaggtt 154  Q
    ||||||||||||||||||||||||||||| || |||| |||||| ||||||| ||||||||| ||| || | ||  |  | | || ||||||||||  ||    
T  17946317 tttccatcaatttagtccttgtacacgtgacttcctttttgacatgtgtacatgacaacacaacatacagggagccagcttagcatcactaacggacctt 17946218  T
Q  155 ttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatattttgcaaaattcagagacgaatttggccgattttttaaaattc 254  Q
    ||||||||||||||||||||||||||| |  |  |||||||||||| |||| |||||||||||||||| |  ||||| ||| || |||  ||  ||||||    
T  17946217 ttggacggagggaccattttgatggacatgagagaaattcagggacaaaattgatattttgcaaaatttaaggacgattttagctgatgcttgcaaattc 17946118  T
Q  255 agggacgaatttga 268  Q
    ||||||||| ||||    
T  17946117 agggacgaagttga 17946104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 153 - 278
Target Start/End: Original strand, 24208061 - 24208186
Alignment:
Q  153 ttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatattttgcaaaattcagagacgaatttggccgattttttaaaat 252  Q
    ||||||||||||||||   |||||||||||||||||||||||||||||||| | ||||||| | | ||||||| |||||| ||||||||||||| |||||    
T  24208061 ttttggacggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaataattcagggacgaaattggccgatttttcaaaat 24208160  T
Q  253 tcagggacgaatttgaggtattagtc 278  Q
    ||| |||  | |||||||||||||||    
T  24208161 tcaaggagtattttgaggtattagtc 24208186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 189 - 278
Target Start/End: Complemental strand, 39663243 - 39663154
Alignment:
Q  189 aaattcagggactaaatagatattttgcaaaattcagagacgaatttggccgattttttaaaattcagggacgaatttgaggtattagtc 278  Q
    ||||||||||||||||||| ||||||||||||||||| |||||||||| ||||||||| |||||||| |||||||||| |||||||||||    
T  39663243 aaattcagggactaaatagctattttgcaaaattcagggacgaatttgaccgatttttaaaaattcaaggacgaattttaggtattagtc 39663154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 153 - 278
Target Start/End: Original strand, 6786000 - 6786125
Alignment:
Q  153 ttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatattttgcaaaattcagagacgaatttggccgattttttaaaat 252  Q
    ||||||||||||||||   |||||||||||||||||||||||||||||||| | |||||||   | |||| || |||||| ||||||||||||| |||||    
T  6786000 ttttggacggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcaaataattaagggacgaaattggccgatttttcaaaat 6786099  T
Q  253 tcagggacgaatttgaggtattagtc 278  Q
    ||| |||| | |||||||||||||||    
T  6786100 tcaaggactattttgaggtattagtc 6786125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 189 - 278
Target Start/End: Complemental strand, 16376825 - 16376736
Alignment:
Q  189 aaattcagggactaaatagatattttgcaaaattcagagacgaatttggccgattttttaaaattcagggacgaatttgaggtattagtc 278  Q
    ||||||||||||||||||| ||||| | ||||||||| |||||||||| ||||||||||||||||||  |||||||||||||||||||||    
T  16376825 aaattcagggactaaatagctatttcgtaaaattcagggacgaatttgaccgattttttaaaattcaaagacgaatttgaggtattagtc 16376736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 189 - 280
Target Start/End: Complemental strand, 14387438 - 14387347
Alignment:
Q  189 aaattcagggactaaatagatattttgcaaaattcagagacgaatttggccgattttttaaaattcagggacgaatttgaggtattagtcta 280  Q
    ||||||||||||||| | ||||||| | ||||||||| |||||| ||||||||||||| |||||||| ||||||||||||||||||||||||    
T  14387438 aaattcagggactaatttgatatttcgtaaaattcagggacgaaattggccgatttttcaaaattcaaggacgaatttgaggtattagtcta 14387347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 196 - 275
Target Start/End: Complemental strand, 19906764 - 19906685
Alignment:
Q  196 gggactaaatagatattttgcaaaattcagagacgaatttggccgattttttaaaattcagggacgaatttgaggtatta 275  Q
    |||||||||||||||||| ||||||||||| |||||||||| |||||||||||||||||| |||||||||| ||||||||    
T  19906764 gggactaaatagatatttcgcaaaattcagggacgaatttgaccgattttttaaaattcaaggacgaatttaaggtatta 19906685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 189 - 278
Target Start/End: Original strand, 16764611 - 16764700
Alignment:
Q  189 aaattcagggactaaatagatattttgcaaaattcagagacgaatttggccgattttttaaaattcagggacgaatttgaggtattagtc 278  Q
    ||||||||||||||| | ||||||| ||||||||||| |||||| ||||||||||| | |||||||| ||||||||||||||||||||||    
T  16764611 aaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccgatttctcaaaattcaaggacgaatttgaggtattagtc 16764700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 172 - 281
Target Start/End: Complemental strand, 19581520 - 19581411
Alignment:
Q  172 tttgatggacgtctgtaaaattcagggactaaatagatattttgcaaaattcagagacgaatttggccgattttttaaaattcagggacgaatttgaggt 271  Q
    |||||||||| | ||  ||||||  ||||||||||||||||| ||||||||||| ||| |||||||| ||||||| |||||| | |||||||||||||||    
T  19581520 tttgatggacatttggtaaattcgaggactaaatagatatttcgcaaaattcagggacaaatttggctgatttttaaaaatttaaggacgaatttgaggt 19581421  T
Q  272 attagtctat 281  Q
    ||||||||||    
T  19581420 attagtctat 19581411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 45 - 125
Target Start/End: Original strand, 10716793 - 10716873
Alignment:
Q  45 aatttttaccatttccatcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacacagcatgcaa 125  Q
    |||||| | |||||||||||| || |||||||||||||||||| ||||||||||||||||||||||||||||| |||||||    
T  10716793 aattttcatcatttccatcaaattggtccttgtacacgtggcttccttgttgacacgtgtacaagacaacacaacatgcaa 10716873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 134 - 278
Target Start/End: Complemental strand, 37020652 - 37020508
Alignment:
Q  134 tcatcaccactaacggaggttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatattttgcaaaattcagagacgaat 233  Q
    ||||||| | |||||||  ||||||||||||||||   ||||||||||||||| |||||||||||||||| | |||||||   ||||||||  ||| ||     
T  37020652 tcatcactattaacggacattttggacggagggactgatttgatggacgtctgcaaaattcagggactaatttgatatttcaaaaaattcaaggacaaaa 37020553  T
Q  234 ttggccgattttttaaaattcagggacgaatttgaggtattagtc 278  Q
    ||| ||||||||| |||||||| |||| | |||||||||||||||    
T  37020552 ttgaccgatttttcaaaattcaaggactattttgaggtattagtc 37020508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 67 - 241
Target Start/End: Complemental strand, 37417485 - 37417310
Alignment:
Q  67 ttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacacagcatgcaagagatacg-tcatcaccactaacggaggttttggacggagg 165  Q
    |||||||||| |||||||||| |||| ||| ||||||||||||||||||||||||||| |  |   | ||| ||   |||||||||   ||||||| |||    
T  37417485 ttagtccttgaacacgtggcttccttcttgccacgtgtacaagacaacacagcatgcagggcaacagatcagcatggctaacggagcacttggacgaagg 37417386  T
Q  166 gaccattttgatggacgtctgtaaaattcagggactaaatagatattttgcaaaattcagagacgaatttggccga 241  Q
    |||| ||||||||||||||||  ||||||||||||||| | ||||||| ||| |||| || || ||||||||||||    
T  37417385 gacctttttgatggacgtctgacaaattcagggactaagttgatatttcgcataattgagggatgaatttggccga 37417310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 189 - 278
Target Start/End: Complemental strand, 34400403 - 34400314
Alignment:
Q  189 aaattcagggactaaatagatattttgcaaaattcagagacgaatttggccgattttttaaaattcagggacgaatttgaggtattagtc 278  Q
    ||||||| |||| |||||| ||||| ||||||||||| || ||||||||||||||||| |||||||| ||| ||||||||||||||||||    
T  34400403 aaattcaaggacaaaatagctatttcgcaaaattcagggatgaatttggccgatttttgaaaattcaaggatgaatttgaggtattagtc 34400314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 189 - 278
Target Start/End: Original strand, 39456780 - 39456869
Alignment:
Q  189 aaattcagggactaaatagatattttgcaaaattcagagacgaatttggccgattttttaaaattcagggacgaatttgaggtattagtc 278  Q
    ||||||||||||||||||| ||||||||||||||||  |||||||||  || ||||||||||||||| ||| |||||||| |||||||||    
T  39456780 aaattcagggactaaatagctattttgcaaaattcatggacgaatttaaccaattttttaaaattcaaggatgaatttgaagtattagtc 39456869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 189 - 278
Target Start/End: Original strand, 40561878 - 40561967
Alignment:
Q  189 aaattcagggactaaatagatattttgcaaaattcagagacgaatttggccgattttttaaaattcagggacgaatttgaggtattagtc 278  Q
    ||||||||||||||| | | |||||  ||||||||||||||||| ||||||||||||| ||||||||  |||||||||||||||||||||    
T  40561878 aaattcagggactaatttgctatttcacaaaattcagagacgaaattggccgatttttcaaaattcaaagacgaatttgaggtattagtc 40561967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 189 - 278
Target Start/End: Complemental strand, 6783453 - 6783364
Alignment:
Q  189 aaattcagggactaaatagatattttgcaaaattcagagacgaatttggccgattttttaaaattcagggacgaatttgaggtattagtc 278  Q
    ||||||||||||||| | ||||||||| | ||||||| |||||| ||| |||||||||||||||||| |||| | |||||||||||||||    
T  6783453 aaattcagggactaatttgatattttgaataattcagggacgaaattgaccgattttttaaaattcaaggactattttgaggtattagtc 6783364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 189 - 278
Target Start/End: Complemental strand, 24205687 - 24205598
Alignment:
Q  189 aaattcagggactaaatagatattttgcaaaattcagagacgaatttggccgattttttaaaattcagggacgaatttgaggtattagtc 278  Q
    ||||||||||||||| | ||||||| | ||||||||| |||||| ||||||||||||| |||||||| |||| | |||||||||||||||    
T  24205687 aaattcagggactaatttgatatttcgaaaaattcagggacgaaattggccgatttttcaaaattcaaggactattttgaggtattagtc 24205598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 46 - 200
Target Start/End: Original strand, 62710 - 62866
Alignment:
Q  46 atttttaccatttccatcaatttagtccttgtacacgtggctg-ccttgttgacacgtgtacaagacaacacagcatgcaaga-gatacgtcatcaccac 143  Q
    ||||||| | |||||||||| || ||| ||||||||||||||  ||||||||||||||||||||| |||||   |||||| || || |  ||| || |||    
T  62710 atttttagcgtttccatcaaattggtcattgtacacgtggctttccttgttgacacgtgtacaaggcaacatgacatgcatgacgacaactcagcagcac 62809  T
Q  144 taacggaggttttggacggagggaccattttgatggacgtctgtaaaattcagggac 200  Q
    || |||||  |||||||||| |||| |||||||||||||| ||| ||||||||||||    
T  62810 tagcggagcatttggacggaaggactattttgatggacgtttgttaaattcagggac 62866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 61 - 268
Target Start/End: Original strand, 29909566 - 29909774
Alignment:
Q  61 atcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacacagcatgcaa-gagatacgtcatcaccactaacggaggttttgga 159  Q
    ||||| ||||||| |  |||||||||| |||| ||| |||| ||||||||||||||| ||||||| | || |  ||| ||   ||||| |||   |||||    
T  29909566 atcaaattagtcccttaacacgtggcttccttcttgccacgcgtacaagacaacacaacatgcaacgcgacagatcaacatggctaacagagcacttgga 29909665  T
Q  160 cggagggaccattttgatggacgtctgtaaaattcagggactaaatagatattttgcaaaattcagagacgaatttggccgattttttaaaattcaggga 259  Q
    |||||||||| ||||||||||||||||  ||||| ||||||||||| ||||||| ||| |||| || ||| || ||||||||    | ||||||||||||    
T  29909666 cggagggacctttttgatggacgtctgacaaattaagggactaaattgatatttcgcataattgagggacaaagttggccgacgcgtgaaaattcaggga 29909765  T
Q  260 cgaatttga 268  Q
    | |||||||    
T  29909766 caaatttga 29909774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 189 - 275
Target Start/End: Original strand, 6799408 - 6799494
Alignment:
Q  189 aaattcagggactaaatagatattttgcaaaattcagagacgaatttggccgattttttaaaattcagggacgaatttgaggtatta 275  Q
    ||||||| |||| |||||| ||||| ||||||||||  |||||||||| ||||||||| |||||||| ||||||||||||| |||||    
T  6799408 aaattcaaggacaaaatagctatttggcaaaattcatggacgaatttgtccgatttttaaaaattcaaggacgaatttgagatatta 6799494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 56 - 122
Target Start/End: Original strand, 11315258 - 11315324
Alignment:
Q  56 tttccatcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacacagcatg 122  Q
    |||||||||| || ||||||||||| |||||| ||||||||||||||||||||||||||||| ||||    
T  11315258 tttccatcaaattggtccttgtacatgtggcttccttgttgacacgtgtacaagacaacacaacatg 11315324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 159 - 241
Target Start/End: Complemental strand, 15372618 - 15372536
Alignment:
Q  159 acggagggaccattttgatggacgtctgtaaaattcagggactaaatagatattttgcaaaattcagagacgaatttggccga 241  Q
    ||||||||||| ||||||||||||||||  ||||||||||| ||||| ||||||||||| |||| || | |||||||||||||    
T  15372618 acggagggacctttttgatggacgtctgataaattcagggattaaattgatattttgcataattgaggggcgaatttggccga 15372536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 14 - 88
Target Start/End: Original strand, 24207971 - 24208045
Alignment:
Q  14 aggaaaaattatactgaaaagttaagtctcgaatttttaccatttccatcaatttagtccttgtacacgtggctg 88  Q
    ||||||||| | ||||||| ||||| | ||||||||| ||||||||||||| |||||||||||||||||||||||    
T  24207971 aggaaaaatgagactgaaatgttaaatatcgaattttgaccatttccatcagtttagtccttgtacacgtggctg 24208045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 189 - 278
Target Start/End: Original strand, 37022185 - 37022274
Alignment:
Q  189 aaattcagggactaaatagatattttgcaaaattcagagacgaatttggccgattttttaaaattcagggacgaatttgaggtattagtc 278  Q
    ||||||||||||||| | ||||||| | ||||||||| |||||| |||| |||||||| |||||||| |||| | |||||||||||||||    
T  37022185 aaattcagggactaatttgatatttcgaaaaattcagggacgaaattggtcgatttttcaaaattcaaggactattttgaggtattagtc 37022274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 70 - 268
Target Start/End: Complemental strand, 361654 - 361455
Alignment:
Q  70 gtccttgtacacgtggctgccttgttgacacgtgtacaagacaacacagcatgcaag-agatacgtcatcaccactaacggaggttttggacggagggac 168  Q
    ||||||||||||||||||| |||| ||||| |||||||| ||| |||| |||||| | ||| || ||||||||| |||| ||  | |||||| |||||||    
T  361654 gtccttgtacacgtggctgacttgatgacatgtgtacaacacatcacaacatgcaggaagacacctcatcaccattaacagatatattggacagagggac 361555  T
Q  169 cattttgatggacgtctgtaaaattcagggactaaatagatattttgcaaaattcagagacgaatttggccgattttttaaaattcagggacgaatttga 268  Q
     |  ||||||||||||||   ||||||  |||||| | |||||||  || |||| || || || |||||||||||  | |||||||| ||||||| ||||    
T  361554 taaattgatggacgtctgacgaattcaatgactaatttgatatttcacataattgagggatgattttggccgattcatgaaaattcaaggacgaagttga 361455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 61 - 222
Target Start/End: Original strand, 39303 - 39465
Alignment:
Q  61 atcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacacagcatgcaaga-gatacgtcatcaccactaacggaggttttgga 159  Q
    ||||| || |||| || |||||||||| |||| ||| |||| ||||||||||||||||||||||||| || |  ||| ||   ||||||||    |||||    
T  39303 atcaaatttgtccctgaacacgtggcttccttcttgccacgcgtacaagacaacacagcatgcaagacgacatatcagcatggctaacggaacacttgga 39402  T
Q  160 cggagggaccattttgatggacgtctgtaaaattcagggactaaatagatattttgcaaaatt 222  Q
    ||| |||||| |||||||| |||||||  ||||||||||||||| | ||||||| ||| ||||    
T  39403 cggggggacctttttgatgaacgtctgacaaattcagggactaagttgatatttcgcataatt 39465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 45 - 127
Target Start/End: Complemental strand, 40097782 - 40097700
Alignment:
Q  45 aatttttaccatttccatcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacacagcatgcaaga 127  Q
    |||||||| | ||| |||||| ||||| ||||||||||||||| |||||||||||||| || ||||||||||  |||||||||    
T  40097782 aatttttagcgttttcatcaaattagttcttgtacacgtggcttccttgttgacacgtatataagacaacacgacatgcaaga 40097700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 56 - 196
Target Start/End: Original strand, 862213 - 862354
Alignment:
Q  56 tttccatcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacacagcatgcaag-agatacgtcatcaccactaacggaggtt 154  Q
    |||| ||||| || |||||||||||| ||||| |||||| ||||||||||||||||||||   |||||| | ||| |  ||| || |||||||||||  |    
T  862213 tttcaatcaaattggtccttgtacacatggcttccttgtagacacgtgtacaagacaacaagccatgcaggaagacaactcaacagcactaacggagcat 862312  T
Q  155 ttggacggagggaccattttgatggacgtctgtaaaattcag 196  Q
    ||||||||| |||| |||||||| ||||| | | ||||||||    
T  862313 ttggacggaaggactattttgattgacgtttattaaattcag 862354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 189 - 278
Target Start/End: Original strand, 2577480 - 2577569
Alignment:
Q  189 aaattcagggactaaatagatattttgcaaaattcagagacgaatttggccgattttttaaaattcagggacgaatttgaggtattagtc 278  Q
    ||||||||||||||| | |||||||   ||||||||| |||||| |||| |||||||| |||||||| |||| | |||||||||||||||    
T  2577480 aaattcagggactaatttgatatttcaaaaaattcagggacgaaattggacgatttttcaaaattcaaggactattttgaggtattagtc 2577569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 61 - 268
Target Start/End: Complemental strand, 25619878 - 25619670
Alignment:
Q  61 atcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacacagcatgca-agagatacgtcatcaccactaacggaggttttgga 159  Q
    ||||| |||||||||| ||| |||||| | || ||| |||||||| |||||||| || |||||| || || |  ||| ||   |||||||||   |||||    
T  25619878 atcaaattagtccttgaacatgtggcttctttcttgccacgtgtataagacaacgcaacatgcagagcgacagatcaacatggctaacggagcacttgga 25619779  T
Q  160 cggagggaccattttgatggacgtctgtaaaattcagggactaaatagatattttgcaaaattcagagacgaatttggccgattttttaaaattcaggga 259  Q
     ||||||||| ||||||||||| | ||  ||||||||||||||| | ||||||||||| |||| || || ||||||| ||||    | |||||||| |||    
T  25619778 tggagggacctttttgatggacatatgacaaattcagggactaagttgatattttgcataattgagggatgaatttgaccgacccataaaaattcaagga 25619679  T
Q  260 cgaatttga 268  Q
    |||||||||    
T  25619678 cgaatttga 25619670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 56 - 238
Target Start/End: Original strand, 26584718 - 26584901
Alignment:
Q  56 tttccatcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacacagcatgcaaga-gatacgtcatcaccactaacggaggtt 154  Q
    |||||||||| || ||| ||||||||||||||| || | ||| ||||| |||  |||||||| |||||| || || |||||| |  ||||| | ||||      
T  26584718 tttccatcaaattcgtcattgtacacgtggctgactggatgatacgtggacatcacaacacaacatgcaggacgacacgtcagcctcactaccagaggga 26584817  T
Q  155 ttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatattttgcaaaattcagagacgaatttggc 238  Q
     ||||||||||||  | |||||||||||||| | ||||| ||||| ||| | ||||||||| ||| || || ||||||||||||    
T  26584818 atggacggagggatgaatttgatggacgtctattaaattgagggattaatttgatattttgaaaacttgagggacgaatttggc 26584901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 155 - 241
Target Start/End: Complemental strand, 39679 - 39593
Alignment:
Q  155 ttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatattttgcaaaattcagagacgaatttggccga 241  Q
    ||||||||||||||| |||| || |||| |||  ||||||||||| ||||| ||||||| ||| |||| || |||||||||||||||    
T  39679 ttggacggagggacctttttaatcgacgcctgataaattcagggattaaattgatatttcgcataattgagggacgaatttggccga 39593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 14 - 88
Target Start/End: Original strand, 6785901 - 6785975
Alignment:
Q  14 aggaaaaattatactgaaaagttaagtctcgaatttttaccatttccatcaatttagtccttgtacacgtggctg 88  Q
    ||||||||| | ||||||| ||||| | || |||||| ||||||||||||| ||||||||||||| |||||||||    
T  6785901 aggaaaaatgagactgaaatgttaaatatcaaattttgaccatttccatcagtttagtccttgtatacgtggctg 6785975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 154 - 268
Target Start/End: Original strand, 11315335 - 11315449
Alignment:
Q  154 tttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatattttgcaaaattcagagacgaatttggccgattttttaaaatt 253  Q
    |||||||||||||||||||||||||||||||||  ||||||||| ||||  | ||||||| |  |||||  |  ||||||||||||||||  | ||||||    
T  11315335 tttggacggagggaccattttgatggacgtctgacaaattcaggaactattttgatatttcgttaaattagggaacgaatttggccgattcataaaaatt 11315434  T
Q  254 cagggacgaatttga 268  Q
     | ||||||| ||||    
T  11315435 taaggacgaagttga 11315449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 48 - 241
Target Start/End: Complemental strand, 15432559 - 15432365
Alignment:
Q  48 ttttaccatttccatcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacacagcatgca-agagatacgtcatcaccactaa 146  Q
    |||| ||| ||| ||||| |||||||||| |||| || || |||| ||| |||||||||||||||||||| ||||||  | || | |||| ||  |||||    
T  15432559 tttttccaattcaatcaaattagtccttgaacacatgacttccttcttgccacgtgtacaagacaacacaacatgcagggcgacatgtcagcatgactaa 15432460  T
Q  147 cggaggttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatattttgcaaaattcagagacgaatttggccga 241  Q
      |||   ||||||| | | ||| ||||||||||||||||  |||||||| |||||||| ||||||| ||| |||| || || ||||||| ||||    
T  15432459 tagagcacttggacgaatgaacctttttgatggacgtctgacaaattcagagactaaattgatatttcgcataattgagggatgaatttgaccga 15432365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 26 - 88
Target Start/End: Complemental strand, 37020720 - 37020658
Alignment:
Q  26 actgaaaagttaagtctcgaatttttaccatttccatcaatttagtccttgtacacgtggctg 88  Q
    ||||||| ||||| | ||||||||| || |||||||||| |||||||||||||||||||||||    
T  37020720 actgaaatgttaaatatcgaattttgacaatttccatcagtttagtccttgtacacgtggctg 37020658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 56 - 120
Target Start/End: Original strand, 11022935 - 11022999
Alignment:
Q  56 tttccatcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacacagca 120  Q
    |||||||||||||||||| |||||||||||||  ||| ||  |||||||||||| ||||||||||    
T  11022935 tttccatcaatttagtccctgtacacgtggctttctttttcccacgtgtacaagccaacacagca 11022999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 56 - 120
Target Start/End: Complemental strand, 28246865 - 28246801
Alignment:
Q  56 tttccatcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacacagca 120  Q
    |||||||||||||||||| |||||||||||||  ||| ||  |||||||||||| ||||||||||    
T  28246865 tttccatcaatttagtccctgtacacgtggctttctttttcccacgtgtacaagccaacacagca 28246801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 234 - 278
Target Start/End: Complemental strand, 42517602 - 42517558
Alignment:
Q  234 ttggccgattttttaaaattcagggacgaatttgaggtattagtc 278  Q
    ||||||||||||| |||||||| ||||||||||||||||||||||    
T  42517602 ttggccgatttttaaaaattcaaggacgaatttgaggtattagtc 42517558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 188 - 275
Target Start/End: Original strand, 31475079 - 31475166
Alignment:
Q  188 aaaattcagggactaaatagatattttgcaaaattcagagacgaatttggccgattttttaaaattcagggacgaatttgaggtatta 275  Q
    |||||||||||| |||||||||||||  |||||||  | |||||||||| | ||||||| |||||| | | ||||| |||||||||||    
T  31475079 aaaattcagggattaaatagatatttctcaaaatttggtgacgaatttgactgatttttgaaaattaaagaacgaagttgaggtatta 31475166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 61 - 222
Target Start/End: Original strand, 92253 - 92415
Alignment:
Q  61 atcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacacagcatgcaaga-gatacgtcatcaccactaacggaggttttgga 159  Q
    ||||| || |||| || |||||||||| |||| ||| |||  ||||||||||||||||||||||||| || |  ||| ||   |||||||||   |||||    
T  92253 atcaaatttgtccctgaacacgtggcttccttcttgccacacgtacaagacaacacagcatgcaagacgacatatcagcatggctaacggagcacttgga 92352  T
Q  160 cggagggaccattttgatggacgtctgtaaaattcagggactaaatagatattttgcaaaatt 222  Q
    | |||||||| |||||||| |||||||  |||||||  |||||| | ||||||| ||| ||||    
T  92353 ctgagggacctttttgatgaacgtctgacaaattcaaagactaagttgatatttcgcataatt 92415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 159 - 241
Target Start/End: Complemental strand, 41706658 - 41706576
Alignment:
Q  159 acggagggaccattttgatggacgtctgtaaaattcagggactaaatagatattttgcaaaattcagagacgaatttggccga 241  Q
    ||||||||||| |||||||||||||  |  ||||||||||| ||||| ||||||| ||| |||| || |||||||||| ||||    
T  41706658 acggagggacctttttgatggacgttcgataaattcagggattaaattgatatttcgcataattgagggacgaatttgaccga 41706576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 78 - 195
Target Start/End: Complemental strand, 42879556 - 42879438
Alignment:
Q  78 acacgtggctgccttgttgacacgtgtacaagacaacacagcatgca-agagatacgtcatcaccactaacggaggttttggacggagggaccattttga 176  Q
    ||||||| || |||| ||| |||||||||||||||||||||||||||  | || |  ||| ||  |||||||||    ||||||||||||||| ||||||    
T  42879556 acacgtgacttccttcttgtcacgtgtacaagacaacacagcatgcagggcgacatatcagcatgactaacggaacacttggacggagggacctttttga 42879457  T
Q  177 tggacgtctgtaaaattca 195  Q
    ||||||||||  |||||||    
T  42879456 tggacgtctgacaaattca 42879438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 44 - 124
Target Start/End: Complemental strand, 42001844 - 42001764
Alignment:
Q  44 gaatttttaccatttccatcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacacagcatgca 124  Q
    |||||||| ||| ||| ||||| | |||||||| ||||||| || |||| ||| ||||||||||||||||| || ||||||    
T  42001844 gaattttttccaattcaatcaaatcagtccttgaacacgtgacttccttcttgtcacgtgtacaagacaactcaacatgca 42001764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 189 - 268
Target Start/End: Original strand, 41144 - 41223
Alignment:
Q  189 aaattcagggactaaatagatattttgcaaaattcagagacgaatttggccgattttttaaaattcagggacgaatttga 268  Q
    ||||||||||| ||||| ||||||| ||| |||| || |||||||||||||||    | |||||||||||||||| ||||    
T  41144 aaattcagggattaaattgatatttcgcataattgagggacgaatttggccgacccgtgaaaattcagggacgaagttga 41223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 97 - 203
Target Start/End: Original strand, 15807861 - 15807968
Alignment:
Q  97 acacgtgtacaagacaacacagcatgcaaga-gatacgtcatcaccactaacggaggttttggacggagggaccattttgatggacgtctgtaaaattca 195  Q
    |||||||||||||||||||   |||||| || || |  ||| |||||||||||| |  |||||||||| |||| | |||||| ||||| ||| |||||||    
T  15807861 acacgtgtacaagacaacaagtcatgcaggaagacaactcagcaccactaacggtgcatttggacggaaggactaatttgattgacgtttgttaaattca 15807960  T
Q  196 gggactaa 203  Q
    ||||||||    
T  15807961 gggactaa 15807968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 97 - 203
Target Start/End: Original strand, 32608009 - 32608116
Alignment:
Q  97 acacgtgtacaagacaacacagcatgcaaga-gatacgtcatcaccactaacggaggttttggacggagggaccattttgatggacgtctgtaaaattca 195  Q
    |||||||||||||||||||   |||||| || || |  ||| |||||||||||| |  |||||||||| |||| | |||||| ||||| ||| |||||||    
T  32608009 acacgtgtacaagacaacaagccatgcaggaagacaactcagcaccactaacggtgcatttggacggaaggactaatttgattgacgtttgttaaattca 32608108  T
Q  196 gggactaa 203  Q
    ||||||||    
T  32608109 gggactaa 32608116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 188 - 275
Target Start/End: Original strand, 37646477 - 37646564
Alignment:
Q  188 aaaattcagggactaaatagatattttgcaaaattcagagacgaatttggccgattttttaaaattcagggacgaatttgaggtatta 275  Q
    |||||||||||||||||||||||||| ||| ||||    |||||||||| | ||||||| ||| |||| | ||||| ||| |||||||    
T  37646477 aaaattcagggactaaatagatatttcgcagaatttgaggacgaatttgactgatttttgaaagttcaagaacgaagttggggtatta 37646564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 45 - 115
Target Start/End: Complemental strand, 14000032 - 13999962
Alignment:
Q  45 aatttttaccatttccatcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaaca 115  Q
    |||||||| | |||||||||| || |||||||||||||||||| | ||||  |||||| ||||||| ||||    
T  14000032 aatttttagcgtttccatcaaattggtccttgtacacgtggcttctttgtaaacacgtatacaagataaca 13999962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 56 - 109
Target Start/End: Complemental strand, 38148698 - 38148645
Alignment:
Q  56 tttccatcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaag 109  Q
    |||||||||||||||||| ||||||||||||| |||| ||   |||||||||||    
T  38148698 tttccatcaatttagtccctgtacacgtggcttcctttttccgacgtgtacaag 38148645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 56 - 115
Target Start/End: Original strand, 4416866 - 4416926
Alignment:
Q  56 tttccatcaatttagtccttgtacacgt-ggctgccttgttgacacgtgtacaagacaaca 115  Q
    |||||||||| || |||||||||||||| || |  |||||||||| |||||||||||||||    
T  4416866 tttccatcaaattggtccttgtacacgtgggttttcttgttgacatgtgtacaagacaaca 4416926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #66
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 189 - 241
Target Start/End: Original strand, 41708432 - 41708484
Alignment:
Q  189 aaattcagggactaaatagatattttgcaaaattcagagacgaatttggccga 241  Q
    ||||||||||| ||||| ||||||| ||| |||| || |||||||||||||||    
T  41708432 aaattcagggattaaattgatatttcgcataattgagggacgaatttggccga 41708484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 209; Significance: 1e-114; HSPs: 73)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 11 - 279
Target Start/End: Complemental strand, 51012193 - 51011925
Alignment:
Q  11 cataggaaaaattatactgaaaagttaagtctcgaatttttaccatttccatcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaaga 110  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  51012193 cataggaaaaattatactgaaaagttaagtctcgaatttttaccatttccatcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaaga 51012094  T
Q  111 caacacagcatgcaagagatacgtcatcaccactaacggaggttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagata 210  Q
    ||||||| |||||||| || |||||||||| |||||| ||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  51012093 caacacatcatgcaagggacacgtcatcactactaacagagcttttggacggagggaccattttgatggacgtctgtaaaattcagagactaaatagata 51011994  T
Q  211 ttttgcaaaattcagagacgaatttggccgattttttaaaattcagggacgaatttgaggtattagtct 279  Q
    ||| ||||||||||   | ||||||| |||||||||||||||||| ||||||||||||| |||||||||    
T  51011993 tttcgcaaaattcaagaaagaatttgaccgattttttaaaattcaaggacgaatttgagatattagtct 51011925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 183; E-Value: 5e-99
Query Start/End: Original strand, 14 - 275
Target Start/End: Original strand, 41761605 - 41761867
Alignment:
Q  14 aggaaaaattatactgaaaagttaagtctcgaatttttaccatttccatcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaa 113  Q
    ||||||||||| | ||||||||||| ||| |||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||| || ||    
T  41761605 aggaaaaattacattgaaaagttaaatcttgaatttttaccatttccatcgatttagtccttgtacacgtgactgccttgttgacacgtgtacatgagaa 41761704  T
Q  114 cacagcatgcaagag-atacgtcatcaccactaacggaggttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatatt 212  Q
    ||||||||||||||| | || ||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41761705 cacagcatgcaagaggacacatcatcaccactaacgaagcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatatt 41761804  T
Q  213 ttgcaaaattcagagacgaatttggccgattttttaaaattcagggacgaatttgaggtatta 275  Q
    | ||||||||  | |||||||||||||||||||| |||||||| |||||||||||||||||||    
T  41761805 tcgcaaaatttcgggacgaatttggccgatttttgaaaattcaaggacgaatttgaggtatta 41761867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 176; E-Value: 8e-95
Query Start/End: Original strand, 19 - 277
Target Start/End: Complemental strand, 49523384 - 49523125
Alignment:
Q  19 aaattatactgaaaagttaagtctcgaatttttaccatttccatcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacacag 118  Q
    |||||| ||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||| || || ||||||||||||||||||||||||||||     
T  49523384 aaattacactgaaaagttaaatctcgaatttttaccatttccatcaatttagtctttgtacacgcggttgtcttgttgacacgtgtacaagacaacacaa 49523285  T
Q  119 catgcaaga-gatacgtcatcaccactaacggaggttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatattttgca 217  Q
    ||||||||| |  || |||||||||||||||||  |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||    
T  49523284 catgcaagaaggcacatcatcaccactaacggattttttggacggagggaccattttgatgaacgtctgtaaaattcagggactaaatagatatttcgca 49523185  T
Q  218 aaattcagagacgaatttggccgattttttaaaattcagggacgaatttgaggtattagt 277  Q
    |||||||  ||||||||| |||||||||||||||||||  ||||||||||||||||||||    
T  49523184 aaattcatggacgaatttagccgattttttaaaattcaatgacgaatttgaggtattagt 49523125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 161; E-Value: 7e-86
Query Start/End: Original strand, 11 - 278
Target Start/End: Complemental strand, 41781807 - 41781539
Alignment:
Q  11 cataggaaaaattatactgaaaagttaagtctcgaatttttaccatttccatcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaaga 110  Q
    ||||| |||||| | | ||||||||||| ||||||| |||||||||||||||||||||||| ||||||||| ||||||| ||||||||||  ||||| ||    
T  41781807 catagaaaaaatgacattgaaaagttaaatctcgaagttttaccatttccatcaatttagttcttgtacacatggctgctttgttgacacacgtacatga 41781708  T
Q  111 caacacagcatgcaagag-atacgtcatcaccactaacggaggttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagat 209  Q
    ||||||| |||||||||| | || |||||| ||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||    
T  41781707 caacacatcatgcaagaggacacatcatcatcactaacggagcttttggacggagggaccattttgatggatgtctgtaaaattcagggactaaataaat 41781608  T
Q  210 attttgcaaaattcagagacgaatttggccgattttttaaaattcagggacgaatttgaggtattagtc 278  Q
    |||||||||||||||| ||| |||||| |||||||||||||||||| | || |||||||||||||||||    
T  41781607 attttgcaaaattcagggacaaatttgaccgattttttaaaattcaagaacaaatttgaggtattagtc 41781539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 158; E-Value: 4e-84
Query Start/End: Original strand, 14 - 278
Target Start/End: Original strand, 35404304 - 35404569
Alignment:
Q  14 aggaaaaattatactgaaaagttaagtctcgaatttttaccatttccatcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaa 113  Q
    ||||||||||| ||| ||||||||| | ||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||| |||||| |||||    
T  35404304 aggaaaaattacactaaaaagttaaatatcgaatttttaccatttccatcaatttagtcattgtacacgtggctgtcttgttgacacatgtacatgacaa 35404403  T
Q  114 cacagcatgcaagag-atacgtcatcaccactaacggaggttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatatt 212  Q
    |||| |||| ||||| | ||||||||||||||||||||| ||||||||||| ||||||||||| ||||||||||||||||||||||| |||||| |||||    
T  35404404 cacaacatggaagaggacacgtcatcaccactaacggagcttttggacggatggaccattttgttggacgtctgtaaaattcagggattaaataaatatt 35404503  T
Q  213 ttgcaaaattcagagacgaatttggccgattttttaaaattcagggacgaatttgaggtattagtc 278  Q
    | |||||||| |  ||||||||| ||||||||||||||||||| | | |||| |||||||||||||    
T  35404504 tcgcaaaattgaaggacgaatttagccgattttttaaaattcaagtatgaatctgaggtattagtc 35404569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 155; E-Value: 3e-82
Query Start/End: Original strand, 17 - 278
Target Start/End: Complemental strand, 48814049 - 48813787
Alignment:
Q  17 aaaaattatactgaaaagttaagtctcgaatttttaccatttccatcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacac 116  Q
    |||||| | |||||||||||||  ||  ||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||| ||||||||    
T  48814049 aaaaatgacactgaaaagttaacactacaatttttaccatttccatcaatttagtccttgtacacgtggctgccttgttaacacatgtacatgacaacac 48813950  T
Q  117 agcatgcaagag-atacgtcatcaccactaacggaggttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatattttg 215  Q
    | |||||||||| | || |||||||||| ||| ||| ||||||||| ||||||||||||||||||||||| ||||||||||| |||||||| ||||||||    
T  48813949 aacatgcaagaggacacatcatcaccaccaacagagcttttggacgaagggaccattttgatggacgtctataaaattcaggaactaaatatatattttg 48813850  T
Q  216 caaaattcagagacgaatttggccgattttttaaaattcagggacgaatttgaggtattagtc 278  Q
    |||||||||| ||  |||||||| ||||||| |||||||| ||||||||||||||||||||||    
T  48813849 caaaattcagggataaatttggctgatttttgaaaattcaaggacgaatttgaggtattagtc 48813787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 136; E-Value: 6e-71
Query Start/End: Original strand, 17 - 239
Target Start/End: Complemental strand, 42980897 - 42980674
Alignment:
Q  17 aaaaattatactgaaaagttaagtctcgaatttttaccatttccatcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacac 116  Q
    |||||||| | ||||||||||| |||||||||||||| |||||||||||||||||| ||||||||||| ||| |||||||||||||||||| ||||||||    
T  42980897 aaaaattacaatgaaaagttaaatctcgaatttttacaatttccatcaatttagtctttgtacacgtgactgtcttgttgacacgtgtacaggacaacac 42980798  T
Q  117 agcatgcaaga-gatacgtcatcaccactaacggaggttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatattttg 215  Q
    | ||||||||| || || |||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||| |    
T  42980797 aacatgcaagaggacacatcatcaccactaacagagcttttggacggagggaccattttgatggacgtctgtaaaattaagggactaaatagaaatttcg 42980698  T
Q  216 caaaattcagagacgaatttggcc 239  Q
     ||||||||  ||| |||||||||    
T  42980697 taaaattcatggacaaatttggcc 42980674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 128; E-Value: 4e-66
Query Start/End: Original strand, 17 - 255
Target Start/End: Original strand, 48646609 - 48646848
Alignment:
Q  17 aaaaattatactgaaaagttaagtctcgaatttttaccatttccatcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacac 116  Q
    |||||| | |||||||||||||  ||  ||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||| | ||||||||    
T  48646609 aaaaatgacactgaaaagttaaaactacaatttttaccatttccatcaaattagtccttgtacacgtggttgccttgttgacacgtgtaaatgacaacac 48646708  T
Q  117 agcatgcaagag-atacgtcatcaccactaacggaggttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatattttg 215  Q
    | |||||||||| | || ||||||||||||||| || ||||||||||| |||||||||||||| | |||||||||||||||||||||||||||||||| |    
T  48646709 aacatgcaagaggacacatcatcaccactaacgaagcttttggacggaaggaccattttgatgaaggtctgtaaaattcagggactaaatagatatttcg 48646808  T
Q  216 caaaattcagagacgaatttggccgattttttaaaattca 255  Q
    | |||||||  ||||||||| || || |||| ||||||||    
T  48646809 ctaaattcaaggacgaatttagctgacttttgaaaattca 48646848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 29 - 278
Target Start/End: Complemental strand, 43519674 - 43519424
Alignment:
Q  29 gaaaagttaagtctcgaatttttaccatttccatcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacacagcatgcaaga- 127  Q
    |||| ||||| | ||||||||| |||||||||||||||||||||||||||||| |||||| |||| |||||||||| || ||||||| |||||||||||     
T  43519674 gaaatgttaaatatcgaattttgaccatttccatcaatttagtccttgtacacatggctgacttgctgacacgtgtgcatgacaacaaagcatgcaagaa 43519575  T
Q  128 gatacgtcatcaccactaacggaggttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatattttgcaaaattcagag 227  Q
    |  || ||||||| | ||| |||  ||||||||||||||||   |||||||||||| ||||||||||||||||||| | ||||||| ||||||||||| |    
T  43519574 gccacatcatcactattaatggaccttttggacggagggacggatttgatggacgtttgtaaaattcagggactaatttgatatttcgcaaaattcaggg 43519475  T
Q  228 acgaatttggccgattttttaaaattcagggacgaatttgaggtattagtc 278  Q
    ||||| ||||||||||||| |||||||| ||||||||||||||||||||||    
T  43519474 acgaaattggccgatttttcaaaattcaaggacgaatttgaggtattagtc 43519424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 114; E-Value: 8e-58
Query Start/End: Original strand, 47 - 275
Target Start/End: Original strand, 2693145 - 2693373
Alignment:
Q  47 tttttaccatttccatcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacacagcatgcaaga-gatacgtcatcaccacta 145  Q
    ||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||| || || |||||| |||||    
T  2693145 tttttaccatttccatcaaattagtccttgtacacgtggctgccttcttgacacgtgtacaggacaacacagcatgcaagatgacacatcatcatcacta 2693244  T
Q  146 acggaggttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatattttgcaaaattcagagacgaatttggccgatttt 245  Q
    | |||  || |||||||| ||||||||||||||||| | | |||||||||  |||||||||||||||| |||||||| ||  |  |||||||| ||||||    
T  2693245 atggaacttatggacggatggaccattttgatggacat-tttaaaattcaaagactaaatagatatttcgcaaaatttaggaataaatttggctgatttt 2693343  T
Q  246 ttaaaattcagggacgaatttgaggtatta 275  Q
    ||||||||||  |||||| |||||||||||    
T  2693344 ttaaaattcaaagacgaagttgaggtatta 2693373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 104; E-Value: 7e-52
Query Start/End: Original strand, 17 - 275
Target Start/End: Complemental strand, 11601932 - 11601674
Alignment:
Q  17 aaaaattatactgaaaagttaagtctcgaatttttaccatttccatcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacac 116  Q
    |||||| | |||||||||||||  ||  ||||||||||||||||||||| ||||||||| ||||||||  |||||| |||||||||||||| ||||||||    
T  11601932 aaaaatgacactgaaaagttaaaactgcaatttttaccatttccatcaaattagtccttatacacgtgattgccttcttgacacgtgtacatgacaacac 11601833  T
Q  117 agcatgcaaga-gatacgtcatcaccactaacggaggttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatattttg 215  Q
    | || |||||| || || ||| || |||||||| || || ||||| ||||||| |||||||||||||||||||||||||||||||| |||| ||||||||    
T  11601832 aacacgcaagaggacacatcagcatcactaacgaagcttgtggacagagggactattttgatggacgtctgtaaaattcagggact-aatatatattttg 11601734  T
Q  216 caaaattcagagacgaatttggccgattttttaaaattcagggacgaatttgaggtatta 275  Q
    |||||||  | ||  |||||| | ||||||| |||||||| | |||||||| ||||||||    
T  11601733 caaaatttggggataaatttgactgatttttgaaaattcaagaacgaattttaggtatta 11601674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 18 - 255
Target Start/End: Original strand, 52868031 - 52868250
Alignment:
Q  18 aaaattatactgaaaagttaagtctcgaatttttaccatttccatcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacaca 117  Q
    ||||||| ||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||                   |||| |||||||||    
T  52868031 aaaattacactgaaaagttaaatctcaaatttttaccatttccatcaatttagtccttgtacacgtg-------------------tacatgacaacaca 52868111  T
Q  118 gcatgcaagag-atacgtcatcaccactaacggaggttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatattttgc 216  Q
    ||||||||||| | |||||||| |||||||||||| ||||||||| || |||||||||||| | ||||||| |||||||| |||||||||||||||| ||    
T  52868112 gcatgcaagaggacacgtcatcgccactaacggagcttttggacgaagtgaccattttgataggcgtctgttaaattcagagactaaatagatatttcgc 52868211  T
Q  217 aaaattcagagacgaatttggccgattttttaaaattca 255  Q
    |||||| | ||||||||||| ||||||||||||||||||    
T  52868212 aaaatttatagacgaatttgaccgattttttaaaattca 52868250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 14 - 128
Target Start/End: Original strand, 11255799 - 11255913
Alignment:
Q  14 aggaaaaattatactgaaaagttaagtctcgaatttttaccatttccatcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaa 113  Q
    ||||||||||| ||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11255799 aggaaaaattacactgaaaagttaaatctcgaatttttacaatttccatcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaa 11255898  T
Q  114 cacagcatgcaagag 128  Q
    ||||||||| |||||    
T  11255899 cacagcatgtaagag 11255913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 189 - 278
Target Start/End: Original strand, 49524733 - 49524822
Alignment:
Q  189 aaattcagggactaaatagatattttgcaaaattcagagacgaatttggccgattttttaaaattcagggacgaatttgaggtattagtc 278  Q
    ||||||||||||||||||| ||||||||||||||||| |||||||||| |||||||||||||||||| ||||||||||||||||||||||    
T  49524733 aaattcagggactaaatagctattttgcaaaattcagggacgaatttgaccgattttttaaaattcaaggacgaatttgaggtattagtc 49524822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 48 - 241
Target Start/End: Complemental strand, 35996294 - 35996100
Alignment:
Q  48 ttttaccatttccatcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacacagcatgcaaga-gatacgtcatcaccactaa 146  Q
    |||| ||| ||| ||||| |||||||||| |||||||||| |||| ||| |||||||||||||||||||| |||||| |  || | |||| ||   ||||    
T  35996294 tttttccaattcaatcaaattagtccttgaacacgtggcttccttcttgccacgtgtacaagacaacacaacatgcatggcgacatgtcagcatggctaa 35996195  T
Q  147 cggaggttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatattttgcaaaattcagagacgaatttggccga 241  Q
    |||||   ||||||||||||||| ||||||||||||||||  ||||||||||| ||||| ||||||||||| |||| || |||||||||| ||||    
T  35996194 cggagcacttggacggagggacctttttgatggacgtctgataaattcagggattaaattgatattttgcacaattgagggacgaatttgaccga 35996100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 189 - 278
Target Start/End: Complemental strand, 35401838 - 35401749
Alignment:
Q  189 aaattcagggactaaatagatattttgcaaaattcagagacgaatttggccgattttttaaaattcagggacgaatttgaggtattagtc 278  Q
    ||||||| |||||||||||||||||  |||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  35401838 aaattcaaggactaaatagatatttcacaaaattcagggacgaatttggccgattttttaaaattcaaggacgaatttgaggtattagtc 35401749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 189 - 268
Target Start/End: Complemental strand, 39345653 - 39345574
Alignment:
Q  189 aaattcagggactaaatagatattttgcaaaattcagagacgaatttggccgattttttaaaattcagggacgaatttga 268  Q
    ||||||||||||||||||| ||||| ||||||||||| ||||||||||||||||||||||||||||| ||||||||||||    
T  39345653 aaattcagggactaaatagctatttcgcaaaattcagggacgaatttggccgattttttaaaattcaaggacgaatttga 39345574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 189 - 278
Target Start/End: Original strand, 4173740 - 4173829
Alignment:
Q  189 aaattcagggactaaatagatattttgcaaaattcagagacgaatttggccgattttttaaaattcagggacgaatttgaggtattagtc 278  Q
    ||||||||||||||| | ||||||| ||||||||||| |||||| ||||||||||||| |||||||| ||||||||||||||||||||||    
T  4173740 aaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccgatttttcaaaattcaaggacgaatttgaggtattagtc 4173829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 189 - 278
Target Start/End: Complemental strand, 43507256 - 43507167
Alignment:
Q  189 aaattcagggactaaatagatattttgcaaaattcagagacgaatttggccgattttttaaaattcagggacgaatttgaggtattagtc 278  Q
    ||||||||||||||| | ||||||| ||||||||||| |||||| ||||||||||||| |||||||| ||||||||||||||||||||||    
T  43507256 aaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccgatttttcaaaattcaaggacgaatttgaggtattagtc 43507167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 189 - 278
Target Start/End: Original strand, 43508653 - 43508742
Alignment:
Q  189 aaattcagggactaaatagatattttgcaaaattcagagacgaatttggccgattttttaaaattcagggacgaatttgaggtattagtc 278  Q
    ||||||||||||||| | ||||||| ||||||||||| |||||| ||||||||||||| |||||||| ||||||||||||||||||||||    
T  43508653 aaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccgatttttcaaaattcaaggacgaatttgaggtattagtc 43508742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 189 - 278
Target Start/End: Complemental strand, 20493916 - 20493827
Alignment:
Q  189 aaattcagggactaaatagatattttgcaaaattcagagacgaatttggccgattttttaaaattcagggacgaatttgaggtattagtc 278  Q
    ||||||||| ||||||||||||||| ||||||||||   ||||||||||||||| ||||||||||||  |||||||||||||||||||||    
T  20493916 aaattcaggaactaaatagatatttcgcaaaattcaagaacgaatttggccgatattttaaaattcaatgacgaatttgaggtattagtc 20493827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 189 - 278
Target Start/End: Complemental strand, 33264471 - 33264382
Alignment:
Q  189 aaattcagggactaaatagatattttgcaaaattcagagacgaatttggccgattttttaaaattcagggacgaatttgaggtattagtc 278  Q
    ||||||||| ||||| | ||||||||||||||||||| |||||| ||| ||||||||| |||||||| ||||||||||||||||||||||    
T  33264471 aaattcaggaactaatttgatattttgcaaaattcagggacgaaattgaccgatttttcaaaattcaaggacgaatttgaggtattagtc 33264382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 189 - 278
Target Start/End: Original strand, 51013886 - 51013975
Alignment:
Q  189 aaattcagggactaaatagatattttgcaaaattcagagacgaatttggccgattttttaaaattcagggacgaatttgaggtattagtc 278  Q
    ||||||||||||| | | ||||||||||||||||||| |||||| ||| ||||||||| |||||||| ||||||||||||||||||||||    
T  51013886 aaattcagggactcatttgatattttgcaaaattcagggacgaaattgaccgatttttcaaaattcaaggacgaatttgaggtattagtc 51013975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 197 - 281
Target Start/End: Complemental strand, 48645336 - 48645252
Alignment:
Q  197 ggactaaatagatattttgcaaaattcagagacgaatttggccgattttttaaaattcagggacgaatttgaggtattagtctat 281  Q
    ||||||||||||||||| ||||||||||  |||||||||| | ||||||| |||||||| |||||||||||||||||||||||||    
T  48645336 ggactaaatagatatttcgcaaaattcatggacgaatttgactgatttttgaaaattcaaggacgaatttgaggtattagtctat 48645252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 61 - 268
Target Start/End: Complemental strand, 2827622 - 2827417
Alignment:
Q  61 atcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacacagcatgcaaga-gatacgtcatcaccactaacggaggttttgga 159  Q
    ||||| ||||||| || |||||||||| |||| ||| |||| ||||||||||||||| ||||||||| || |  ||| ||   ||||||||||  |||||    
T  2827622 atcaaattagtccctgaacacgtggcttccttcttgccacgcgtacaagacaacacatcatgcaagacgacagatcagcaaggctaacggaggacttgga 2827523  T
Q  160 cggagggaccattttgatggacgtctgtaaaattcagggactaaatagatattttgcaaaattcagagacgaatttggccgattttttaaaattcaggga 259  Q
    |||||||||| ||||||||||||||||  ||||||| ||||||| | |||||||  || |||| || ||||   ||||||||  | | |||||| |||||    
T  2827522 cggagggacctttttgatggacgtctgacaaattcaaggactaagttgatatttcacataattgagggacg---ttggccgacgtgtgaaaatttaggga 2827426  T
Q  260 cgaatttga 268  Q
    |||||||||    
T  2827425 cgaatttga 2827417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 189 - 279
Target Start/End: Complemental strand, 4169775 - 4169685
Alignment:
Q  189 aaattcagggactaaatagatattttgcaaaattcagagacgaatttggccgattttttaaaattcagggacgaatttgaggtattagtct 279  Q
    ||||||||||||||| | ||||||| |||||||||||||||||| |||  | |||||| |||||||| |||||||||||||||||||||||    
T  4169775 aaattcagggactaatttgatatttcgcaaaattcagagacgaaattgatcaatttttcaaaattcaaggacgaatttgaggtattagtct 4169685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 189 - 278
Target Start/End: Complemental strand, 319362 - 319273
Alignment:
Q  189 aaattcagggactaaatagatattttgcaaaattcagagacgaatttggccgattttttaaaattcagggacgaatttgaggtattagtc 278  Q
    ||||||||| ||||| | ||||||| ||||||||||| |||||| ||| ||||||||| |||||||| ||||||||||||||||||||||    
T  319362 aaattcaggaactaatttgatatttcgcaaaattcagggacgaaattgaccgatttttcaaaattcaaggacgaatttgaggtattagtc 319273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 45 - 200
Target Start/End: Complemental strand, 50131396 - 50131240
Alignment:
Q  45 aatttttaccatttccatcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacacagcatgcaaga-gatacgtcatcaccac 143  Q
    |||||||||| ||| |||||| |||||||||||||||||| || |||||| ||||||||||||||||||||   |||| | || ||||  ||| || |||    
T  50131396 aatttttaccgttttcatcaaattagtccttgtacacgtgacttccttgtagacacgtgtacaagacaacatgacatgtaggacgatagctcagcagcac 50131297  T
Q  144 taacggaggttttggacggagggaccattttgatggacgtctgtaaaattcagggac 200  Q
    ||  ||||  ||||||||||  ||| |||||||||||||| ||| ||||||||||||    
T  50131296 tactggagcatttggacggaatgactattttgatggacgtttgtcaaattcagggac 50131240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 48 - 241
Target Start/End: Original strand, 2350397 - 2350594
Alignment:
Q  48 ttttaccatttccatcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaaga---caacacagcatgca-agagatacgtcatcaccac 143  Q
    |||| ||| ||| ||||| |||||||||| |||||||||| |||| ||| |||||||||||||   |||||||||||||| || || | |||| ||   |    
T  2350397 tttttccaattcaatcaaattagtccttgaacacgtggcttccttcttgccacgtgtacaagagtacaacacagcatgcagagcgacatgtcagcatggc 2350496  T
Q  144 taacggaggttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatattttgcaaaattcagagacgaatttggccga 241  Q
    ||||||||   |||||| |||||||| |||||||| |||||||  |||||||| || ||||| ||||||| ||| |||| || ||| |||||||||||    
T  2350497 taacggagcacttggacagagggacctttttgatgaacgtctgataaattcagagattaaattgatatttcgcataattgagggacaaatttggccga 2350594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 28 - 275
Target Start/End: Complemental strand, 7149791 - 7149542
Alignment:
Q  28 tgaaaagttaagtctcgaatttttaccatttccatcaatttagtccttgtacacgt-ggctgccttgttgacacgtgtacaagacaacacagcatgcaag 126  Q
    |||||||||||  ||  |||||||| | ||||||| || || |||||||||||||| || || || | ||||||||||||| ||||||||| ||||||      
T  7149791 tgaaaagttaaaactgcaatttttaacgtttccattaaattggtccttgtacacgtaggttgactagatgacacgtgtacaggacaacacaacatgcaga 7149692  T
Q  127 a-gatacgtcatcaccactaacggaggttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatattttgcaaaattcag 225  Q
    | || | |||| |  ||||||  |||   ||||||||||||||||||||||| ||| | ||| ||||||| |||  ||||| |||||| |||||||| |     
T  7149691 acgacatgtcagcctcactaatagagtgattggacggagggaccattttgattgacctatgttaaattcaaggatgaaataaatatttcgcaaaatttaa 7149592  T
Q  226 agacgaatttggccgattttttaaaattcagggacgaatttgaggtatta 275  Q
    ||| ||||| ||| ||||||| |||||||| ||| |||||| | ||||||    
T  7149591 agatgaattcggctgatttttgaaaattcaaggatgaattttatgtatta 7149542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 189 - 274
Target Start/End: Complemental strand, 11254208 - 11254123
Alignment:
Q  189 aaattcagggactaaatagatattttgcaaaattcagagacgaatttggccgattttttaaaattcagggacgaatttgaggtatt 274  Q
    ||||||| |||| ||| || ||||| |||||||| ||||||| ||||||||||||||| |||||||| ||||||||||||||||||    
T  11254208 aaattcaaggacaaaagagctatttcgcaaaatttagagacggatttggccgatttttaaaaattcaaggacgaatttgaggtatt 11254123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 61 - 241
Target Start/End: Complemental strand, 47942029 - 47941848
Alignment:
Q  61 atcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacacagcatgcaaga-gatacgtcatcaccactaacggaggttttgga 159  Q
    ||||| || ||||||| |||||||||| |||| ||| |||| |||||||||| |||| ||||||||  || | |||| ||   |||||||||    |  |    
T  47942029 atcaaattcgtccttgaacacgtggcttccttcttgccacgcgtacaagacagcacaacatgcaaggcgacatgtcagcatggctaacggagcccgttaa 47941930  T
Q  160 cggagggaccattttgatggacgtctgtaaaattcagggactaaatagatattttgcaaaattcagagacgaatttggccga 241  Q
    |||||||||| ||||||||||||||||  ||||||||||| ||||| ||||||| ||| |||| ||||||||||||| ||||    
T  47941929 cggagggacctttttgatggacgtctgataaattcagggattaaattgatatttcgcataattgagagacgaatttgaccga 47941848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 61 - 260
Target Start/End: Original strand, 44794666 - 44794866
Alignment:
Q  61 atcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacacagcatgcaaga-gatacgtcatcaccactaacggaggttttgga 159  Q
    ||||| || |||| || |||||||||| |||| ||| |||| |||||||||| |||||||||||||  || | |||| ||   |||||||||    |  |    
T  44794666 atcaaattcgtccctgaacacgtggcttccttcttgccacgcgtacaagacatcacagcatgcaaggcgacatgtcagcatggctaacggagcccgttaa 44794765  T
Q  160 cggagggaccattttgatggacgtctgtaaaattcagggactaaatagatattttgcaaaattcagagacgaatttggccgattttttaaaattcaggga 259  Q
    |||||||||| ||||||||||||||||  ||||||||||| ||||| ||||||| ||| |||| || |||||||||| ||||  | | ||||||||||||    
T  44794766 cggagggacctttttgatggacgtctgataaattcagggattaaattgatatttcgcataattgagggacgaatttgaccgacgtgtgaaaattcaggga 44794865  T
Q  260 c 260  Q
    |    
T  44794866 c 44794866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 45 - 112
Target Start/End: Complemental strand, 27382351 - 27382284
Alignment:
Q  45 aatttttaccatttccatcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagaca 112  Q
    |||||||| | |||||||||| |||||||||||||||||||||  |||||||||||||||||||||||    
T  27382351 aatttttagcgtttccatcaaattagtccttgtacacgtggctttcttgttgacacgtgtacaagaca 27382284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 192 - 278
Target Start/End: Original strand, 320903 - 320989
Alignment:
Q  192 ttcagggactaaatagatattttgcaaaattcagagacgaatttggccgattttttaaaattcagggacgaatttgaggtattagtc 278  Q
    |||| ||||||| | ||||||| ||||||||||  || ||| ||||||||||||| |||||||| ||||||||||||||||||||||    
T  320903 ttcaaggactaatttgatatttcgcaaaattcaaggatgaaattggccgatttttcaaaattcaaggacgaatttgaggtattagtc 320989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 159 - 268
Target Start/End: Original strand, 10372711 - 10372820
Alignment:
Q  159 acggagggaccattttgatggacgtctgtaaaattcagggactaaatagatattttgcaaaattcagagacgaatttggccgattttttaaaattcaggg 258  Q
    ||||||||||| ||||||||||||||||  |||||||||||  |||| ||||||| ||| |||| || ||| |||||||||||    | |||||||||||    
T  10372711 acggagggacctttttgatggacgtctgacaaattcagggatgaaattgatatttcgcataattgagggactaatttggccgacgcgtgaaaattcaggg 10372810  T
Q  259 acgaatttga 268  Q
    ||||||||||    
T  10372811 acgaatttga 10372820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 188 - 277
Target Start/End: Complemental strand, 20820075 - 20819986
Alignment:
Q  188 aaaattcagggactaaatagatattttgcaaaattcagagacgaatttggccgattttttaaaattcagggacgaatttgaggtattagt 277  Q
    ||||||||||||||||||| ||||||||||||||| ||  |  |||||| | ||||||| |||||||| ||||||| |||||||||||||    
T  20820075 aaaattcagggactaaataaatattttgcaaaatttaggaataaatttgactgatttttgaaaattcaaggacgaagttgaggtattagt 20819986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 45 - 122
Target Start/End: Complemental strand, 25993730 - 25993653
Alignment:
Q  45 aatttttaccatttccatcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacacagcatg 122  Q
    |||||| | |||||||||||| || |||| ||||||||||||| | ||||||||||||||||||||||||||| ||||    
T  25993730 aattttcatcatttccatcaaattggtccatgtacacgtggcttcattgttgacacgtgtacaagacaacacatcatg 25993653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 189 - 278
Target Start/End: Original strand, 33266010 - 33266099
Alignment:
Q  189 aaattcagggactaaatagatattttgcaaaattcagagacgaatttggccgattttttaaaattcagggacgaatttgaggtattagtc 278  Q
    ||||||||||||||| | ||||||| |||||||||||  ||||| || |||||||||| |||||||| | ||||||||||| ||||||||    
T  33266010 aaattcagggactaatttgatatttcgcaaaattcaggaacgaaattagccgatttttcaaaattcaagaacgaatttgagatattagtc 33266099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 188 - 255
Target Start/End: Complemental strand, 2691463 - 2691396
Alignment:
Q  188 aaaattcagggactaaatagatattttgcaaaattcagagacgaatttggccgattttttaaaattca 255  Q
    |||||||||||||||||||||||||||||||||||    |||||||||||| ||||||| ||||||||    
T  2691463 aaaattcagggactaaatagatattttgcaaaatttgtggacgaatttggctgatttttgaaaattca 2691396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 46 - 200
Target Start/End: Original strand, 26296785 - 26296940
Alignment:
Q  46 atttttaccatttccatcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacacagcatgcaaga-gatacgtcatcaccact 144  Q
    ||||||| | ||| |||||| || ||||||||| |||||||| |||||| ||||||||||||||||||||   ||||||||| || |  |||||| ||||    
T  26296785 atttttagcgttttcatcaaattggtccttgtatacgtggcttccttgtagacacgtgtacaagacaacatgacatgcaagacgacagctcatcaacact 26296884  T
Q  145 aacggaggttttggacggagggaccattttgatggacgtctgtaaaattcagggac 200  Q
    ||| ||   |||||| |||  ||| |||||||||||||| ||  ||||||||||||    
T  26296885 aacagatcatttggatggaatgactattttgatggacgtttgacaaattcagggac 26296940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 155 - 241
Target Start/End: Original strand, 44558494 - 44558580
Alignment:
Q  155 ttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatattttgcaaaattcagagacgaatttggccga 241  Q
    ||||||||| ||||| ||||||||||||||||  ||||||||||||||| | ||||||| ||| |||| || || ||||||||||||    
T  44558494 ttggacggaaggacctttttgatggacgtctgacaaattcagggactaagttgatatttcgcataattgagggatgaatttggccga 44558580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 189 - 278
Target Start/End: Complemental strand, 833312 - 833223
Alignment:
Q  189 aaattcagggactaaatagatattttgcaaaattcagagacgaatttggccgattttttaaaattcagggacgaatttgaggtattagtc 278  Q
    ||||||||||||||  | ||||||| | | ||||||| |||||| ||||||||||||| |||||||| |||| | |||||||||||||||    
T  833312 aaattcagggactattttgatatttcgaataattcagggacgaaattggccgatttttcaaaattcaaggactattttgaggtattagtc 833223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 189 - 278
Target Start/End: Original strand, 5439647 - 5439736
Alignment:
Q  189 aaattcagggactaaatagatattttgcaaaattcagagacgaatttggccgattttttaaaattcagggacgaatttgaggtattagtc 278  Q
    ||||||||||||||  | ||||||| | | ||||||| |||||| ||||||||||||| |||||||| |||| | |||||||||||||||    
T  5439647 aaattcagggactattttgatatttcgaataattcagggacgaaattggccgatttttcaaaattcaaggactattttgaggtattagtc 5439736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 159 - 268
Target Start/End: Complemental strand, 10762700 - 10762591
Alignment:
Q  159 acggagggaccattttgatggacgtctgtaaaattcagggactaaatagatattttgcaaaattcagagacgaatttggccgattttttaaaattcaggg 258  Q
    ||||||||||| ||||||||||||||||  |||||||||||  |||| || |||| ||| |||| || ||| |||||||||||    | |||||||||||    
T  10762700 acggagggacctttttgatggacgtctgacaaattcagggatgaaattgaaatttcgcataattgagggactaatttggccgacgcgtgaaaattcaggg 10762601  T
Q  259 acgaatttga 268  Q
    ||||||||||    
T  10762600 acgaatttga 10762591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 58 - 124
Target Start/End: Complemental strand, 4519597 - 4519531
Alignment:
Q  58 tccatcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacacagcatgca 124  Q
    |||||||| |||||||||| ||||||| ||  ||| ||| |||||||||||||||||||||||||||    
T  4519597 tccatcaaattagtccttgaacacgtgactttctttttgccacgtgtacaagacaacacagcatgca 4519531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 189 - 278
Target Start/End: Complemental strand, 5437900 - 5437811
Alignment:
Q  189 aaattcagggactaaatagatattttgcaaaattcagagacgaatttggccgattttttaaaattcagggacgaatttgaggtattagtc 278  Q
    ||||||||||||||  | ||||||| | | ||||||| |||||| || |||||||||| |||||||| |||| | |||||||||||||||    
T  5437900 aaattcagggactattttgatatttcgaataattcagggacgaaatttgccgatttttcaaaattcaaggactattttgaggtattagtc 5437811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 56 - 120
Target Start/End: Complemental strand, 5484742 - 5484678
Alignment:
Q  56 tttccatcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacacagca 120  Q
    |||||||||||||||||| |||||||||||||  ||| ||  |||||||||||| ||||||||||    
T  5484742 tttccatcaatttagtccctgtacacgtggctttctttttcccacgtgtacaagccaacacagca 5484678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 56 - 120
Target Start/End: Complemental strand, 32652301 - 32652237
Alignment:
Q  56 tttccatcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacacagca 120  Q
    |||||||||||||||||| ||||||||||||| |||| ||  |||||||| ||| ||||||||||    
T  32652301 tttccatcaatttagtccatgtacacgtggcttcctttttcccacgtgtataagccaacacagca 32652237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 56 - 120
Target Start/End: Original strand, 42880683 - 42880747
Alignment:
Q  56 tttccatcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacacagca 120  Q
    |||||||||||||||||| |||||||||||||  ||| ||  |||||||||||| ||||||||||    
T  42880683 tttccatcaatttagtccctgtacacgtggctttctttttcccacgtgtacaagtcaacacagca 42880747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 189 - 273
Target Start/End: Original strand, 43521109 - 43521193
Alignment:
Q  189 aaattcagggactaaatagatattttgcaaaattcagagacgaatttggccgattttttaaaattcagggacgaatttgaggtat 273  Q
    ||||||||||||||| | ||||||| |||||||||| | ||||| ||| | ||||||| |||||||| | || ||||||||||||    
T  43521109 aaattcagggactaatttgatatttcgcaaaattcaaaaacgaaattgactgatttttcaaaattcaagaacaaatttgaggtat 43521193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 56 - 120
Target Start/End: Original strand, 43779789 - 43779853
Alignment:
Q  56 tttccatcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacacagca 120  Q
    |||||||||||||||||| |||||||||||||  ||| ||  |||||||||||| ||||||||||    
T  43779789 tttccatcaatttagtccctgtacacgtggctttctttttcccacgtgtacaagccaacacagca 43779853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 159 - 278
Target Start/End: Original strand, 835012 - 835131
Alignment:
Q  159 acggagggaccattttgatggacgtctgtaaaattcagggactaaatagatattttgcaaaattcagagacgaatttggccgattttttaaaattcaggg 258  Q
    |||||||||| | |||||| ||||| |   ||||||||||||||  | ||||||| | | ||||||| ||| || |||| |||||||| |||||||| ||    
T  835012 acggagggactaatttgattgacgttttgtaaattcagggactattttgatatttcgaataattcagggacaaaattggtcgatttttcaaaattcaagg 835111  T
Q  259 acgaatttgaggtattagtc 278  Q
    || | |||||||||||||||    
T  835112 actattttgaggtattagtc 835131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 141 - 268
Target Start/End: Complemental strand, 39083776 - 39083649
Alignment:
Q  141 cactaacggaggttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatattttgcaaaattcagagacgaatttggccg 240  Q
    ||||||||||  |||||||||||||||| |  ||||||||||||    ||||||||||||||  | ||||||| |  ||||| || ||||||||||||||    
T  39083776 cactaacggaccttttggacggagggacgaaattgatggacgtcaaacaaattcagggactattttgatatttcgttaaatttagggacgaatttggccg 39083677  T
Q  241 attttttaaaattcagggacgaatttga 268  Q
    |    | |||||||||||||||| ||||    
T  39083676 acccctgaaaattcagggacgaaattga 39083649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 154 - 243
Target Start/End: Original strand, 13450980 - 13451069
Alignment:
Q  154 tttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatattttgcaaaattcagagacgaatttggccgatt 243  Q
    |||||| ||||||||||||||||||||||||||  ||||||| ||||||  | ||||||| |  |||||  | |||||||||||| ||||    
T  13450980 tttggatggagggaccattttgatggacgtctgataaattcaaggactattttgatatttcgttaaattgggggacgaatttggctgatt 13451069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 56 - 117
Target Start/End: Complemental strand, 39083841 - 39083780
Alignment:
Q  56 tttccatcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacaca 117  Q
    |||||||||||||||||| |||||||||||||  ||| ||  |||||||||||| |||||||    
T  39083841 tttccatcaatttagtccctgtacacgtggctttctttttcccacgtgtacaagccaacaca 39083780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 56 - 117
Target Start/End: Complemental strand, 39189584 - 39189523
Alignment:
Q  56 tttccatcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacaca 117  Q
    |||||||||||||||||| |||||||||||||  ||| ||  |||||||||||| |||||||    
T  39189584 tttccatcaatttagtccctgtacacgtggctttctttttcccacgtgtacaagccaacaca 39189523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 189 - 278
Target Start/End: Original strand, 42982452 - 42982541
Alignment:
Q  189 aaattcagggactaaatagatattttgcaaaattcagagacgaatttggccgattttttaaaattcagggacgaatttgaggtattagtc 278  Q
    ||||||| |||| |||||  ||||| ||||||||||| |||||||||| | ||||||| |||||||| |||  ||||| | |||||||||    
T  42982452 aaattcaaggacaaaataactatttcgcaaaattcagggacgaatttgacagatttttaaaaattcaaggaaaaatttaacgtattagtc 42982541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 61 - 236
Target Start/End: Complemental strand, 27625024 - 27624848
Alignment:
Q  61 atcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacacagcatgca-agagatacgtcatcaccactaacggaggttttgga 159  Q
    ||||| |||||||||| |||||||||| |||| ||| |||  ||||||||||||| ||||||||  | || |  ||| ||   ||||| |||   || ||    
T  27625024 atcaaattagtccttgaacacgtggcttccttcttgccacacgtacaagacaacaaagcatgcatggcgacagatcaacatggctaacagagcactttga 27624925  T
Q  160 cggagggaccattttgatggacgtctgtaaaattcagggactaaatagatattttgcaaaattcagagacgaatttg 236  Q
    ||||  |||| ||||||||||||||||  ||||||||||||||| | ||||||| ||| |||| | ||| |||||||    
T  27624924 cggaatgacctttttgatggacgtctgacaaattcagggactaagttgatatttcgcataattgaaagatgaatttg 27624848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 56 - 120
Target Start/End: Complemental strand, 39921696 - 39921632
Alignment:
Q  56 tttccatcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacacagca 120  Q
    |||||||||||||||||| |||||||||||||  ||| ||  ||| |||||||| ||||||||||    
T  39921696 tttccatcaatttagtccctgtacacgtggctttctttttcccacatgtacaagccaacacagca 39921632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 48 - 124
Target Start/End: Original strand, 51041824 - 51041900
Alignment:
Q  48 ttttaccatttccatcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacacagcatgca 124  Q
    |||| ||| ||| ||||| |||||||||| ||| |||||| |||| ||| |||||||| ||||||||||| ||||||    
T  51041824 tttttccaattcaatcaaattagtccttgaacatgtggcttccttcttgccacgtgtataagacaacacaacatgca 51041900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 197 - 281
Target Start/End: Original strand, 54387890 - 54387973
Alignment:
Q  197 ggactaaatagatattttgcaaaattcagagacgaatttggccgattttttaaaattcagggacgaatttgaggtattagtctat 281  Q
    ||||||||||||||||| |||||||| ||  || |||||||| ||||||| |||||| | |||||||||| || |||| ||||||    
T  54387890 ggactaaatagatatttcgcaaaatt-aggaactaatttggctgatttttaaaaatttaaggacgaatttaagatattggtctat 54387973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 141 - 268
Target Start/End: Complemental strand, 39921631 - 39921504
Alignment:
Q  141 cactaacggaggttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatattttgcaaaattcagagacgaatttggccg 240  Q
    ||||||||||  |||||||||||||||| |  ||||||||||||    ||||||||||||||  | ||||||| |  |||||  | ||||||||||||||    
T  39921631 cactaacggaccttttggacggagggacgaaattgatggacgtcaaacaaattcagggactattttgatatttcgttaaatttggggacgaatttggccg 39921532  T
Q  241 attttttaaaattcagggacgaatttga 268  Q
    |    | |||||||||||||||| ||||    
T  39921531 acccctgaaaattcagggacgaaattga 39921504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 189 - 268
Target Start/End: Original strand, 39923009 - 39923088
Alignment:
Q  189 aaattcagggactaaatagatattttgcaaaattcagagacgaatttggccgattttttaaaattcagggacgaatttga 268  Q
    ||||||||||| ||||| ||||||| ||| |||| || |||||| ||||||||  | | |||||||||||||||| ||||    
T  39923009 aaattcagggattaaattgatatttcgcataattgagggacgaagttggccgacctgtaaaaattcagggacgaaattga 39923088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 141 - 268
Target Start/End: Original strand, 43779854 - 43779981
Alignment:
Q  141 cactaacggaggttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatattttgcaaaattcagagacgaatttggccg 240  Q
    ||||||||||  |||||||||||||||| |  ||||||||||||    ||||||||||||||  | ||||||| |  |||||  | ||||||||||||||    
T  43779854 cactaacggaccttttggacggagggacgaaattgatggacgtcaaacaaattcagggactattttgatatttcgttaaatttggggacgaatttggccg 43779953  T
Q  241 attttttaaaattcagggacgaatttga 268  Q
    |    | |||||||||||||||| ||||    
T  43779954 acccctgaaaattcagggacgaaattga 43779981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 69 - 124
Target Start/End: Original strand, 44558407 - 44558462
Alignment:
Q  69 agtccttgtacacgtggctgccttgttgacacgtgtacaagacaacacagcatgca 124  Q
    |||||||| |||||||||| |||| ||| |||| ||||||||||||| ||||||||    
T  44558407 agtccttgaacacgtggcttccttcttgccacgcgtacaagacaacagagcatgca 44558462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 141 - 200
Target Start/End: Complemental strand, 44972548 - 44972489
Alignment:
Q  141 cactaacggaggttttggacggagggaccattttgatggacgtctgtaaaattcagggac 200  Q
    |||||||||||  |||||||||| |||| |||||||||||||| ||| ||||| ||||||    
T  44972548 cactaacggagcatttggacggaaggactattttgatggacgtttgttaaatttagggac 44972489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 189 - 242
Target Start/End: Complemental strand, 34460314 - 34460261
Alignment:
Q  189 aaattcagggactaaatagatattttgcaaaattcagagacgaatttggccgat 242  Q
    ||||| ||||| ||||| ||||||||||| |||| ||||||||||||| |||||    
T  34460314 aaatttagggattaaattgatattttgcataattaagagacgaatttgaccgat 34460261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 56 - 117
Target Start/End: Original strand, 41356094 - 41356155
Alignment:
Q  56 tttccatcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacaca 117  Q
    |||||||||| || |||||||| ||||||||| ||||||||||||   ||||| ||||||||    
T  41356094 tttccatcaaattggtccttgttcacgtggcttccttgttgacacaattacaaaacaacaca 41356155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 141 - 241
Target Start/End: Complemental strand, 5484677 - 5484577
Alignment:
Q  141 cactaacggaggttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatattttgcaaaattcagagacgaatttggccg 240  Q
    ||||||||||  |||||||||||||||| |  ||||||||||||    ||||||||||||||  | ||||||| |  |||||  | ||||||||||||||    
T  5484677 cactaacggaccttttggacggagggacgaaattgatggacgtcaaacaaattcagggactattttgatatttcgttaaatttggggacgaatttggccg 5484578  T
Q  241 a 241  Q
    |    
T  5484577 a 5484577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 144 - 268
Target Start/End: Complemental strand, 39189516 - 39189392
Alignment:
Q  144 taacggaggttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatattttgcaaaattcagagacgaatttggccgatt 243  Q
    |||||||  |||||||||||||||| |  ||||||||||||    ||||||||||||||  | ||||||| |  |||||  | |||||||||||||||      
T  39189516 taacggaccttttggacggagggacgaaattgatggacgtcaaacaaattcagggactattttgatatttcgttaaatttggggacgaatttggccgacc 39189417  T
Q  244 ttttaaaattcagggacgaatttga 268  Q
      | |||||||||||||||| ||||    
T  39189416 cctgaaaattcagggacgaaattga 39189392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 189 - 241
Target Start/End: Complemental strand, 44793023 - 44792971
Alignment:
Q  189 aaattcagggactaaatagatattttgcaaaattcagagacgaatttggccga 241  Q
    ||||||||||| ||||| ||||||| ||| |||| || |||||||||||||||    
T  44793023 aaattcagggattaaattgatatttcgcataattgagggacgaatttggccga 44792971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 56 - 120
Target Start/End: Original strand, 44994209 - 44994273
Alignment:
Q  56 tttccatcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacacagca 120  Q
    |||||||||||||||||| ||||||| || ||  ||| ||  |||||||||||| ||||||||||    
T  44994209 tttccatcaatttagtccctgtacacatgactttctttttcccacgtgtacaagccaacacagca 44994273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 200; Significance: 1e-109; HSPs: 80)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 14 - 280
Target Start/End: Original strand, 39859088 - 39859355
Alignment:
Q  14 aggaaaaattatactgaaaagttaagtctcgaatttttaccatttccatcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaa 113  Q
    ||||||||||| | |||||||| || |||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||| |||||    
T  39859088 aggaaaaattacattgaaaagtcaaatctcgaatttttaccatttccatcaaattagtccttgtacacgtggctgtcttgttgacacgtgtacatgacaa 39859187  T
Q  114 cacagcatgcaagag-atacgtcatcaccactaacggaggttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatatt 212  Q
    ||||||||||||||| | ||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||    
T  39859188 cacagcatgcaagaggacacgtcatcaccactaacggagcttttggacggagggaccattttgacggacgtctgtaaaattcaaggactaaatagatatt 39859287  T
Q  213 ttgcaaaattcagagacgaatttggccgattttttaaaattcagggacgaatttgaggtattagtcta 280  Q
    | ||||||||||| ||| ||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  39859288 tcgcaaaattcagggactaatttggccgattttttaaaattcaaggacgaatttgaggtattagtcta 39859355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 180; E-Value: 3e-97
Query Start/End: Original strand, 16 - 278
Target Start/End: Complemental strand, 6602598 - 6602335
Alignment:
Q  16 gaaaaattatactgaaaagttaagtctcgaatttttaccatttccatcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaaca 115  Q
    ||||||||| ||||||||| ||| |||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||| |||||||    
T  6602598 gaaaaattacactgaaaagataaatctcgaatttttaccatttccatcaaattagtccttgtacacgtggctgcctggttgacacgtgtacatgacaaca 6602499  T
Q  116 cagcatgcaagag-atacgtcatcaccactaacggaggttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatatttt 214  Q
    |||||||||| || | | ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  6602498 cagcatgcaaaaggacatgtcatcaccactaacggagcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatatttc 6602399  T
Q  215 gcaaaattcagagacgaatttggccgattttttaaaattcagggacgaatttgaggtattagtc 278  Q
    ||||||||||| ||  | ||| ||||||||||||||||||| || |||||||||| ||||||||    
T  6602398 gcaaaattcagggataagtttagccgattttttaaaattcaaggtcgaatttgagttattagtc 6602335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 175; E-Value: 3e-94
Query Start/End: Original strand, 17 - 278
Target Start/End: Original strand, 30940287 - 30940549
Alignment:
Q  17 aaaaattatactgaaaagttaagtctcgaatttttaccatttccatcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacac 116  Q
    |||||||| || |||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||    
T  30940287 aaaaattacaccgaaaagttaaatctcgaatttttacaatttccatcaatttagtccttgtacacgtggctgccttgttgacatgtgtacaggacaacac 30940386  T
Q  117 agcatgcaagag-atacgtcatcaccactaacggaggttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatattttg 215  Q
    ||||||||| || | || |||||||||||||||||| |||||||||||| ||||||||||||| |||| ||||||||||||||||||||||||||||| |    
T  30940387 agcatgcaataggacacatcatcaccactaacggagcttttggacggagagaccattttgatgaacgtttgtaaaattcagggactaaatagatatttcg 30940486  T
Q  216 caaaattcagagacgaatttggccgattttttaaaattcagggacgaatttgaggtattagtc 278  Q
     |||||| |||||||||||||||||||||||||||||||| | || ||||| |||||||||||    
T  30940487 taaaattaagagacgaatttggccgattttttaaaattcaagaacaaatttaaggtattagtc 30940549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 174; E-Value: 1e-93
Query Start/End: Original strand, 14 - 278
Target Start/End: Complemental strand, 45359601 - 45359336
Alignment:
Q  14 aggaaaaattatactgaaaagttaagtctcgaatttttaccatttccatcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaa 113  Q
    ||||||||||| | |||||||| || |||||||||||||||||||||||||| |||||||||||||||||| ||||||| |||| ||||||||| |||||    
T  45359601 aggaaaaattacattgaaaagtcaaatctcgaatttttaccatttccatcaaattagtccttgtacacgtgactgcctttttgaaacgtgtacatgacaa 45359502  T
Q  114 cacagcatgcaagag-atacgtcatcaccactaacggaggttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatatt 212  Q
    ||||||||||||||| | ||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  45359501 cacagcatgcaagaggacacgtcatcaccactaacggagcttttggatggagggaccattttgatggacgtctgtaaaattcaaggactaaatagatatt 45359402  T
Q  213 ttgcaaaattcagagacgaatttggccgattttttaaaattcagggacgaatttgaggtattagtc 278  Q
    | ||||||||||  |||| ||||| |||||||||||||||||| |||| ||||| |||||||||||    
T  45359401 tcgcaaaattcaaggacggatttgaccgattttttaaaattcatggacaaatttaaggtattagtc 45359336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 172; E-Value: 2e-92
Query Start/End: Original strand, 16 - 278
Target Start/End: Original strand, 47386070 - 47386333
Alignment:
Q  16 gaaaaattatactgaaaagttaagtctcgaatttttaccatttccatcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaaca 115  Q
    ||||||||| ||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||    
T  47386070 gaaaaattacactgaaaagttaaatctcgaatttttacaatttccatcaatttagtccttgtacacgtggctgccttgttgacacttgtacaggacaaca 47386169  T
Q  116 cagcatgcaagagat-acgtcatcaccactaacggaggttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatatttt 214  Q
    || |||||||||||  || |||||||||||||||||| |||||||||||  |||||||||||||||||||||||||||| || ||||||||| ||||||     
T  47386170 catcatgcaagagaacacatcatcaccactaacggagcttttggacggaatgaccattttgatggacgtctgtaaaatttagagactaaataaatatttc 47386269  T
Q  215 gcaaaattcagagacgaatttggccgattttttaaaattcagggacgaatttgaggtattagtc 278  Q
    ||||||||||  |||||||||| | |||||||||||||| | ||||||||||||||||||||||    
T  47386270 gcaaaattcaaggacgaatttgactgattttttaaaattaaaggacgaatttgaggtattagtc 47386333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 167; E-Value: 2e-89
Query Start/End: Original strand, 17 - 278
Target Start/End: Original strand, 38474005 - 38474267
Alignment:
Q  17 aaaaattatactgaaaagttaagtctcgaatttttaccatttccatcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacac 116  Q
    |||||||| ||||||||||||| ||| |||||||||||||||||||||||| |||||||| ||||||||||| |||||||||||||||||| ||||||||    
T  38474005 aaaaattacactgaaaagttaaatcttgaatttttaccatttccatcaattcagtccttgcacacgtggctgtcttgttgacacgtgtacaggacaacac 38474104  T
Q  117 agcatgcaagag-atacgtcatcaccactaacggaggttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatattttg 215  Q
    ||||| |||||| | || |||||||||||||||||| ||||||||||| ||||||||||||| | ||||||||||||||| ||||||||||||||||| |    
T  38474105 agcatacaagaggacacatcatcaccactaacggagcttttggacggatggaccattttgataggcgtctgtaaaattcaaggactaaatagatatttcg 38474204  T
Q  216 caaaattcagagacgaatttggccgattttttaaaattcagggacgaatttgaggtattagtc 278  Q
    |||||||||| |||||||||| ||||||||| |||||||  |||| |||||||||||||||||    
T  38474205 caaaattcagggacgaatttgaccgatttttaaaaattcgaggactaatttgaggtattagtc 38474267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 164; E-Value: 1e-87
Query Start/End: Original strand, 17 - 275
Target Start/End: Original strand, 24228271 - 24228530
Alignment:
Q  17 aaaaattatactgaaaagttaagtctcgaatttttaccatttccatcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacac 116  Q
    |||||||| |||||||| |||| |||| ||||||||| |||||||||||||||||| | |||||||||||||||||||||||||||||| | ||||||||    
T  24228271 aaaaattagactgaaaaattaaatctcaaatttttacaatttccatcaatttagtcttcgtacacgtggctgccttgttgacacgtgtatatgacaacac 24228370  T
Q  117 agcatgcaagag-atacgtcatcaccactaacggaggttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatattttg 215  Q
    | |||||||||| | || ||||||||||||| |||| ||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||| |    
T  24228371 aacatgcaagaggacacatcatcaccactaatggagcttttggacgaagggaccattttgatggacgtctgtaaaattcagagactaaatagatatttcg 24228470  T
Q  216 caaaattcagagacgaatttggccgattttttaaaattcagggacgaatttgaggtatta 275  Q
    |||||||||| ||||||||||||| ||||||||||||||| | ||||| |||||||||||    
T  24228471 caaaattcagggacgaatttggccaattttttaaaattcaagaacgaaattgaggtatta 24228530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 161; E-Value: 7e-86
Query Start/End: Original strand, 17 - 255
Target Start/End: Complemental strand, 13168385 - 13168143
Alignment:
Q  17 aaaaattatactgaaaagttaagtctcgaatttttaccatttccatcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacac 116  Q
    |||||||| | |||||| | || |||||||||||||||||||||||||| |||||||||||||||||| ||| |||||||||||||||||| ||||||||    
T  13168385 aaaaattacattgaaaattcaaatctcgaatttttaccatttccatcaaattagtccttgtacacgtgtctgtcttgttgacacgtgtacatgacaacac 13168286  T
Q  117 agcatgcaaga-gatacgtcatcaccactaacggaggttttggacggagggaccattttgatggacgtctgtaaaattc---agggactaaatagatatt 212  Q
    ||||||||||| || ||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||   ||||||||||||||||||    
T  13168285 agcatgcaagatgacacgtcatcaccactaacggagcttttggacggatggaccattttgatggacgtctgtaaaattcaggagggactaaatagatatt 13168186  T
Q  213 ttgcaaaattcagagacgaatttggccgattttttaaaattca 255  Q
    | ||||||||||  |||||||||||||||||||||||||||||    
T  13168185 tcgcaaaattcaaggacgaatttggccgattttttaaaattca 13168143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 159; E-Value: 1e-84
Query Start/End: Original strand, 14 - 275
Target Start/End: Original strand, 34776774 - 34777036
Alignment:
Q  14 aggaaaaattatactgaaaagttaagtctcgaatttttaccatttccatcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaa 113  Q
    ||||||||||| | |||||| | || | |||||||||||||||||||||||| ||||| |||||||| |||| |||||||||| |||||||||| |||||    
T  34776774 aggaaaaattacattgaaaattcaaatatcgaatttttaccatttccatcaaattagttcttgtacatgtggttgccttgttggcacgtgtacatgacaa 34776873  T
Q  114 cacagcatgcaagag-atacgtcatcaccactaacggaggttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatatt 212  Q
    |||| |||||||||| | ||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34776874 cacaacatgcaagaggacacgtcatcatcactaacggagtttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatatt 34776973  T
Q  213 ttgcaaaattcagagacgaatttggccgattttttaaaattcagggacgaatttgaggtatta 275  Q
    | |||||||||||  | |||||||||| ||||||||||||| | | |||||||||||||||||    
T  34776974 tcgcaaaattcaggaatgaatttggccaattttttaaaatttaagaacgaatttgaggtatta 34777036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 141; E-Value: 6e-74
Query Start/End: Original strand, 16 - 236
Target Start/End: Original strand, 35693231 - 35693454
Alignment:
Q  16 gaaaaattatactgaaaagttaagtctcgaatttttaccatttccatcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaaca 115  Q
    ||||||||||||||||||||||| |||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  35693231 gaaaaattatactgaaaagttaaatctcgaatctttaccattttcatcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaaca 35693330  T
Q  116 cagcatgcaaga-gatacgtcatcaccactaacggaggttttggacggagggaccattttgatggacgtctgtaaaattcagggactaa--atagatatt 212  Q
    |  ||||||||| || || |||||||||||||| ||  ||||||| |||||||||||||||||||||||||||||||||||||||||||  | |||||||    
T  35693331 ctacatgcaagaggacacatcatcaccactaacagaacttttggatggagggaccattttgatggacgtctgtaaaattcagggactaattagagatatt 35693430  T
Q  213 ttgcaaaattcagagacgaatttg 236  Q
      ||||||||||  ||||||||||    
T  35693431 ccgcaaaattcaaggacgaatttg 35693454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 141; E-Value: 6e-74
Query Start/End: Original strand, 17 - 279
Target Start/End: Original strand, 37115402 - 37115651
Alignment:
Q  17 aaaaattatactgaaaagttaagtctcgaatttttaccatttccatcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacac 116  Q
    |||||||| ||| ||||||||| ||||||||||||||||||| ||| ||| ||||||||||||||||||||||||||||||||||||                 
T  37115402 aaaaattacactaaaaagttaaatctcgaatttttaccattttcattaatatagtccttgtacacgtggctgccttgttgacacgtg------------- 37115488  T
Q  117 agcatgcaagag-atacgtcatcaccactaacggaggttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatattttg 215  Q
     ||||||||||| | || |||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||    
T  37115489 -gcatgcaagaggacacatcatcaccactaacggagcttttggacggagggactattttgatggacgtctgtaaaattcaggtactaaatagatattttg 37115587  T
Q  216 caaaattcagagacgaatttggccgattttttaaaattcagggacgaatttgaggtattagtct 279  Q
    ||||||||||  ||||||||| | ||||||||||||||||  ||||||||||||||||||||||    
T  37115588 caaaattcaggaacgaatttgactgattttttaaaattcaatgacgaatttgaggtattagtct 37115651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 134; E-Value: 9e-70
Query Start/End: Original strand, 26 - 278
Target Start/End: Original strand, 27665936 - 27666189
Alignment:
Q  26 actgaaaagttaagtctcgaatttttaccatttccatcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacacagcatgcaa 125  Q
    ||||||| ||||| | ||||||||| || |||||||||||||||||||||||||||||||||| |||| ||||||||||||| ||||||| |||||||||    
T  27665936 actgaaatgttaaatatcgaattttgacaatttccatcaatttagtccttgtacacgtggctgacttgctgacacgtgtacaggacaacaaagcatgcaa 27666035  T
Q  126 ga-gatacgtcatcaccactaacggaggttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatattttgcaaaattca 224  Q
    || |  || ||||||| | ||||||   ||||||||||||||||   |||||||||||| ||||||||||||||||||| | ||||||| ||||||||||    
T  27666036 gaagccacatcatcactattaacgggccttttggacggagggacggatttgatggacgtttgtaaaattcagggactaatttgatatttcgcaaaattca 27666135  T
Q  225 gagacgaatttggccgattttttaaaattcagggacgaatttgaggtattagtc 278  Q
    | |||||| ||||||||||||| |||||||| ||||||||||||||||||||||    
T  27666136 gggacgaaattggccgatttttcaaaattcaaggacgaatttgaggtattagtc 27666189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 124; E-Value: 9e-64
Query Start/End: Original strand, 18 - 200
Target Start/End: Original strand, 23906124 - 23906307
Alignment:
Q  18 aaaattatactgaaaagttaagtctcgaatttttaccatttccatcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacaca 117  Q
    ||||||| ||||||||||||| |||||||||||||| |||||||||||||||||||||||||| |||  ||||||||||||||||||||| |||||||||    
T  23906124 aaaattacactgaaaagttaaatctcgaatttttacaatttccatcaatttagtccttgtacaagtgtttgccttgttgacacgtgtacaggacaacaca 23906223  T
Q  118 gcatgcaaga-gatacgtcatcaccactaacggaggttttggacggagggaccattttgatggacgtctgtaaaattcagggac 200  Q
    |||||||||| || |||||||| ||| |||||||| |||||||||||||||||||||||||||||| |||||||||| ||||||    
T  23906224 gcatgcaagaggacacgtcatcgccattaacggagcttttggacggagggaccattttgatggacgactgtaaaatttagggac 23906307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 26 - 278
Target Start/End: Complemental strand, 56582 - 56330
Alignment:
Q  26 actgaaaagttaagtctcgaatttttaccatttccatcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacacagcatgcaa 125  Q
    ||||||| ||||| | ||||||||| |||||||||||||||||||||  | |||||||||||| |||| ||||||||||||||||||||||| |||||||    
T  56582 actgaaatgttaaatatcgaattttgaccatttccatcaatttagtctct-tacacgtggctgacttgctgacacgtgtacaagacaacacaacatgcaa 56484  T
Q  126 ga-gatacgtcatcaccactaacggaggttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatattttgcaaaattca 224  Q
    || |  || ||||||| |||||| ||  |||||||||||||||     ||||||||||||||||||||||||||||||| | ||||||| ||||||||||    
T  56483 gaagccacatcatcactactaacagacattttggacggagggagtgaattgatggacgtctgtaaaattcagggactaatttgatatttcgcaaaattca 56384  T
Q  225 gagacgaatttggccgattttttaaaattcagggacgaatttgaggtattagtc 278  Q
    | |||||| || |||||||||| |||||||| ||||||||||||||||||||||    
T  56383 gggacgaaatttgccgatttttcaaaattcaaggacgaatttgaggtattagtc 56330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 26 - 278
Target Start/End: Original strand, 29996385 - 29996638
Alignment:
Q  26 actgaaaagttaagtctcgaatttttaccatttccatcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacacagcatgcaa 125  Q
    ||||||| ||||| | | ||||||| ||||||||||||||||||||||||||||||||| |||  ||| ||||||||||||| ||||||| | |||| ||    
T  29996385 actgaaatgttaaatattgaattttgaccatttccatcaatttagtccttgtacacgtgactgatttgctgacacgtgtacatgacaacaaaacatgtaa 29996484  T
Q  126 ga-gatacgtcatcaccactaacggaggttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatattttgcaaaattca 224  Q
    || |  |||||||||| | |||||||  ||||||| |||||||| | |||||||||||||||||||||||||||| ||| | ||||||| ||||||||||    
T  29996485 gaagccacgtcatcactattaacggaccttttggatggagggacgaatttgatggacgtctgtaaaattcagggattaatttgatatttcgcaaaattca 29996584  T
Q  225 gagacgaatttggccgattttttaaaattcagggacgaatttgaggtattagtc 278  Q
    | ||| || ||| ||||||||| |||||||| ||||||||||||||||||||||    
T  29996585 gggacaaaattgaccgatttttcaaaattcaaggacgaatttgaggtattagtc 29996638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 17 - 222
Target Start/End: Original strand, 48852209 - 48852415
Alignment:
Q  17 aaaaattatactgaaaagttaagtctcgaatttttaccatttccatcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacac 116  Q
    |||||| | ||| |||||||||  || |||||||||||||||||||||| ||||| |||||||||||| ||| ||||||||||| |||||||||||||||    
T  48852209 aaaaatgacactaaaaagttaaaactggaatttttaccatttccatcaaattagttcttgtacacgtgactgtcttgttgacacatgtacaagacaacac 48852308  T
Q  117 agcatgcaagag-atacgtcatcaccactaacggaggttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatattttg 215  Q
    | |||| ||||| | || |||||||||||||| ||| |||||||| ||| |||||||||||||||||||||||||||||| ||| |||||||||||||||    
T  48852309 atcatgtaagaggacacatcatcaccactaacagagcttttggaccgagagaccattttgatggacgtctgtaaaattcaaggattaaatagatattttg 48852408  T
Q  216 caaaatt 222  Q
    |||||||    
T  48852409 caaaatt 48852415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 77 - 275
Target Start/End: Original strand, 37796103 - 37796302
Alignment:
Q  77 tacacgtggctgccttgttgacacgtgtacaagacaacacagcatgcaagag-atacgtcatcaccactaacggaggttttggacggagggaccattttg 175  Q
    |||||||||||||||| |||||||||||| ||||||||||| |||||||||| | || ||| || | ||||||||| || ||||||||||||| ||||||    
T  37796103 tacacgtggctgccttcttgacacgtgtagaagacaacacaacatgcaagaggacacatcagcatcgctaacggagcttatggacggagggactattttg 37796202  T
Q  176 atggacgtctgtaaaattcagggactaaatagatattttgcaaaattcagagacgaatttggccgattttttaaaattcagggacgaatttgaggtatta 275  Q
    ||||||||| |||||||||||||||||||||||||||| ||||||||    |||||||||||| ||||||| |||||||| |||| ||||||||||||||    
T  37796203 atggacgtccgtaaaattcagggactaaatagatatttcgcaaaatttgaggacgaatttggctgatttttgaaaattcaaggacaaatttgaggtatta 37796302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 14 - 168
Target Start/End: Original strand, 46439389 - 46439544
Alignment:
Q  14 aggaaaaattatactgaaaagttaagtctcgaatttttaccatttccatcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaa 113  Q
    ||||||||||| | ||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||    
T  46439389 aggaaaaattacattgaaaagttaaatctcgaatttttaccatttccatcaatttagtccatgtacacgtggctgccctgttgacacgtgtacaagacaa 46439488  T
Q  114 cacagcatgcaaga-gatacgtcatcaccactaacggaggttttggacggagggac 168  Q
    |||| ||||||||| || || || ||||||||||||||| ||||||||||||||||    
T  46439489 cacaacatgcaagaggacacatcgtcaccactaacggagcttttggacggagggac 46439544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 189 - 278
Target Start/End: Complemental strand, 23904672 - 23904583
Alignment:
Q  189 aaattcagggactaaatagatattttgcaaaattcagagacgaatttggccgattttttaaaattcagggacgaatttgaggtattagtc 278  Q
    ||||||| ||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||    
T  23904672 aaattcatggactaaatagctattttgcaaaattcagagacgaatttgaccgattttttaaaattcaaggacgaatttgaggtattagtc 23904583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 189 - 278
Target Start/End: Original strand, 13169683 - 13169772
Alignment:
Q  189 aaattcagggactaaatagatattttgcaaaattcagagacgaatttggccgattttttaaaattcagggacgaatttgaggtattagtc 278  Q
    ||||||||||||||||||||||||| ||||||||||| ||| |||||||||||||||| |||||||| ||||||||||||||||||||||    
T  13169683 aaattcagggactaaatagatatttcgcaaaattcagggacaaatttggccgatttttgaaaattcaaggacgaatttgaggtattagtc 13169772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 134 - 278
Target Start/End: Complemental strand, 20478186 - 20478042
Alignment:
Q  134 tcatcaccactaacggaggttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatattttgcaaaattcagagacgaat 233  Q
    ||||||| | |||||||  ||||||||||||||||   ||||||||||||||| |||||||||||||||| | ||||||| | |||||||||  |||||     
T  20478186 tcatcactattaacggacattttggacggagggactgatttgatggacgtctgcaaaattcagggactaatttgatatttcgaaaaattcaggtacgaaa 20478087  T
Q  234 ttggccgattttttaaaattcagggacgaatttgaggtattagtc 278  Q
    ||||||||||||| |||||||| |||| | |||||||||||||||    
T  20478086 ttggccgatttttcaaaattcaaggactattttgaggtattagtc 20478042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 61 - 268
Target Start/End: Original strand, 46996608 - 46996816
Alignment:
Q  61 atcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacacagcatgcaaga-gatacgtcatcaccactaacggaggttttgga 159  Q
    ||||| || ||||||| |||||||||| |||| ||| |||| ||||||||||||||||||||||||  || |  ||| || | |||||||||   |||||    
T  46996608 atcaaattcgtccttgaacacgtggcttccttcttgccacgcgtacaagacaacacagcatgcaaggcgacagatcagcatcgctaacggagcacttgga 46996707  T
Q  160 cggagggaccattttgatggacgtctgtaaaattcagggactaaatagatattttgcaaaattcagagacgaatttggccgattttttaaaattcaggga 259  Q
    |||||||||| ||||||||||||||||  |||||||| |||||| | ||||||| ||| |||| || |||||| ||||||||    | ||||||||||||    
T  46996708 cggagggacctttttgatggacgtctgacaaattcagtgactaagttgatatttcgcataattgagggacgaagttggccgacgcgtgaaaattcaggga 46996807  T
Q  260 cgaatttga 268  Q
    |||||||||    
T  46996808 cgaatttga 46996816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 189 - 275
Target Start/End: Complemental strand, 39857734 - 39857648
Alignment:
Q  189 aaattcagggactaaatagatattttgcaaaattcagagacgaatttggccgattttttaaaattcagggacgaatttgaggtatta 275  Q
    |||||| |||||||||||||||||| ||||||||||| |||||||||| |||||||||||||||||| |||||||||||||||||||    
T  39857734 aaattctgggactaaatagatatttcgcaaaattcagggacgaatttgaccgattttttaaaattcaaggacgaatttgaggtatta 39857648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 189 - 278
Target Start/End: Original strand, 35403619 - 35403708
Alignment:
Q  189 aaattcagggactaaatagatattttgcaaaattcagagacgaatttggccgattttttaaaattcagggacgaatttgaggtattagtc 278  Q
    ||||||||||||||| | ||||||| ||||||||||| |||||| |||||||||||||||||||||| ||||||||||||||||||||||    
T  35403619 aaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccgattttttaaaattcaaggacgaatttgaggtattagtc 35403708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 56 - 222
Target Start/End: Complemental strand, 1546510 - 1546343
Alignment:
Q  56 tttccatcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacacagcatgca-agagatacgtcatcaccactaacggaggtt 154  Q
    ||||||||||||||||||||||||||||| || |||| ||||||||| || ||||||||||| ||||||  |||  |  ||| || ||||||||||  ||    
T  1546510 tttccatcaatttagtccttgtacacgtgacttcctttttgacacgtatataagacaacacaacatgcagggagccagctcagcatcactaacggacctt 1546411  T
Q  155 ttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatattttgcaaaatt 222  Q
    |||||||||||||||||||||||||||||  |  ||||||| ||||  ||| ||||||| ||||||||    
T  1546410 ttggacggagggaccattttgatggacgtgagagaaattcaaggacgcaattgatatttcgcaaaatt 1546343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 189 - 279
Target Start/End: Complemental strand, 37114030 - 37113940
Alignment:
Q  189 aaattcagggactaaatagatattttgcaaaattcagagacgaatttggccgattttttaaaattcagggacgaatttgaggtattagtct 279  Q
    ||||| ||||||||||||||||||| ||||||||||| || ||||||| || ||||||||||||||| |||||||||||||||||||||||    
T  37114030 aaatttagggactaaatagatatttcgcaaaattcagggatgaatttgaccaattttttaaaattcaaggacgaatttgaggtattagtct 37113940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 189 - 275
Target Start/End: Original strand, 48227941 - 48228027
Alignment:
Q  189 aaattcagggactaaatagatattttgcaaaattcagagacgaatttggccgattttttaaaattcagggacgaatttgaggtatta 275  Q
    |||||||||||| |||||||||||| |||||||||| ||||||||||| ||||||||||||||||||  ||||||||||||||||||    
T  48227941 aaattcagggacaaaatagatatttcgcaaaattcaaagacgaatttgaccgattttttaaaattcaaagacgaatttgaggtatta 48228027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 189 - 278
Target Start/End: Original strand, 78014 - 78103
Alignment:
Q  189 aaattcagggactaaatagatattttgcaaaattcagagacgaatttggccgattttttaaaattcagggacgaatttgaggtattagtc 278  Q
    |||||||||||| || | ||||||||||||||||||| |||||| ||||||||||||| ||||||||  |||||||||||||||||||||    
T  78014 aaattcagggacaaatttgatattttgcaaaattcagggacgaaattggccgatttttcaaaattcaaagacgaatttgaggtattagtc 78103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 141 - 275
Target Start/End: Complemental strand, 13018172 - 13018036
Alignment:
Q  141 cactaacggaggttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatatttt--gcaaaattcagagacgaatttggc 238  Q
    |||||||||||   ||||||||||||||||||||||||||||| ||| |||||||| ||  |||||||||| ||  || |||||    ||||||||||||    
T  13018172 cactaacggagtgattggacggagggaccattttgatggacgtatgttaaattcagagatgaaatagatatatttcgctaaatttgaggacgaatttggc 13018073  T
Q  239 cgattttttaaaattcagggacgaatttgaggtatta 275  Q
     |||||||||||||||| ||| |||||||||||||||    
T  13018072 tgattttttaaaattcaaggatgaatttgaggtatta 13018036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 189 - 278
Target Start/End: Original strand, 22155847 - 22155936
Alignment:
Q  189 aaattcagggactaaatagatattttgcaaaattcagagacgaatttggccgattttttaaaattcagggacgaatttgaggtattagtc 278  Q
    |||||||||||| |||||| ||||||||||||||||  |||||||||||||||||||| |||||||| ||||||| || |||||||||||    
T  22155847 aaattcagggacaaaatagctattttgcaaaattcatggacgaatttggccgatttttgaaaattcaaggacgaagtttaggtattagtc 22155936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 189 - 278
Target Start/End: Original strand, 22211762 - 22211851
Alignment:
Q  189 aaattcagggactaaatagatattttgcaaaattcagagacgaatttggccgattttttaaaattcagggacgaatttgaggtattagtc 278  Q
    |||||||||||| |||||| ||||||||||||||||  |||||||||||||||||||| |||||||| ||||||| || |||||||||||    
T  22211762 aaattcagggacaaaatagctattttgcaaaattcatggacgaatttggccgatttttgaaaattcaaggacgaagtttaggtattagtc 22211851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 189 - 277
Target Start/End: Complemental strand, 24226670 - 24226582
Alignment:
Q  189 aaattcagggactaaatagatattttgcaaaattcagagacgaatttggccgattttttaaaattcagggacgaatttgaggtattagt 277  Q
    ||||||| |||| |||||| ||||| ||||||||||  |||||||||||||||||||| |||||||| |||||||||||||||||||||    
T  24226670 aaattcaaggacaaaatagctatttcgcaaaattcaaggacgaatttggccgatttttgaaaattcaaggacgaatttgaggtattagt 24226582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 69 - 268
Target Start/End: Original strand, 33038711 - 33038911
Alignment:
Q  69 agtccttgtacacgtggctgccttgttgacacgtgtacaagacaacacagcatgcaaga-gatacgtcatcaccactaacggaggttttggacggaggga 167  Q
    |||||||| |||| ||||| |||| |||||||||||| ||||||||||| |||||| || || |  ||| ||   ||||| |||   |||||||||||||    
T  33038711 agtccttgaacacatggcttccttcttgacacgtgtataagacaacacaacatgcaggacgacagatcaacatgcctaacagagcacttggacggaggga 33038810  T
Q  168 ccattttgatggacgtctgtaaaattcagggactaaatagatattttgcaaaattcagagacgaatttggccgattttttaaaattcagggacgaatttg 267  Q
    || |||||||||||||||| |||||||||||||||| | ||||||| ||| |||| || || ||||||| ||||    | |||||||| |||||||||||    
T  33038811 cctttttgatggacgtctgaaaaattcagggactaagttgatatttcgcataattgagggatgaatttgaccgacccataaaaattcaaggacgaatttg 33038910  T
Q  268 a 268  Q
    |    
T  33038911 a 33038911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 189 - 281
Target Start/End: Complemental strand, 47384383 - 47384291
Alignment:
Q  189 aaattcagggactaaatagatattttgcaaaattcagagacgaatttggccgattttttaaaattcagggacgaatttgaggtattagtctat 281  Q
    |||||| |||||||| ||||||||| ||||||||||  ||||||||||||  |||||| |||||||| |||||||||||||||||||||||||    
T  47384383 aaattcggggactaattagatatttcgcaaaattcaaggacgaatttggctcatttttcaaaattcaaggacgaatttgaggtattagtctat 47384291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 189 - 280
Target Start/End: Complemental strand, 34775087 - 34774996
Alignment:
Q  189 aaattcagggactaaatagatattttgcaaaattcagagacgaatttggccgattttttaaaattcagggacgaatttgaggtattagtcta 280  Q
    ||||||||||||||||||| ||||||||||||||||   | ||||||| ||||||||||||||||||  |||||||||||| ||||||||||    
T  34775087 aaattcagggactaaatagctattttgcaaaattcatgaatgaatttgaccgattttttaaaattcaaagacgaatttgagatattagtcta 34774996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 189 - 280
Target Start/End: Complemental strand, 46437196 - 46437105
Alignment:
Q  189 aaattcagggactaaatagatattttgcaaaattcagagacgaatttggccgattttttaaaattcagggacgaatttgaggtattagtcta 280  Q
    ||||||| |||| |||||| ||||| ||||||||||  |||||||||||| ||||||| |||||||| ||||||||||||||||||||||||    
T  46437196 aaattcaaggacaaaatagctatttcgcaaaattcaacgacgaatttggctgatttttgaaaattcaaggacgaatttgaggtattagtcta 46437105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 189 - 275
Target Start/End: Original strand, 6605397 - 6605483
Alignment:
Q  189 aaattcagggactaaatagatattttgcaaaattcagagacgaatttggccgattttttaaaattcagggacgaatttgaggtatta 275  Q
    ||||||||||||||||||| ||||| |||||||||||  || |||||| |||||||||||||||||| |||| ||||||||||||||    
T  6605397 aaattcagggactaaatagctatttcgcaaaattcaggaacaaatttgaccgattttttaaaattcaaggacaaatttgaggtatta 6605483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 189 - 275
Target Start/End: Complemental strand, 27664519 - 27664433
Alignment:
Q  189 aaattcagggactaaatagatattttgcaaaattcagagacgaatttggccgattttttaaaattcagggacgaatttgaggtatta 275  Q
    ||||||||||||||| | ||||||||||||||||||| ||| || ||||||||||||| |||||||| |||| ||||||||||||||    
T  27664519 aaattcagggactaatttgatattttgcaaaattcagggacaaaattggccgatttttcaaaattcaaggactaatttgaggtatta 27664433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 189 - 279
Target Start/End: Complemental strand, 35402058 - 35401968
Alignment:
Q  189 aaattcagggactaaatagatattttgcaaaattcagagacgaatttggccgattttttaaaattcagggacgaatttgaggtattagtct 279  Q
    ||||||||||||||| | ||||||| ||||||||||| |||||| || |||||||||| |||||||| ||||||||||||| |||||||||    
T  35402058 aaattcagggactaatttgatatttcgcaaaattcagggacgaaattagccgatttttcaaaattcaaggacgaatttgagatattagtct 35401968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 189 - 274
Target Start/End: Complemental strand, 35691516 - 35691431
Alignment:
Q  189 aaattcagggactaaatagatattttgcaaaattcagagacgaatttggccgattttttaaaattcagggacgaatttgaggtatt 274  Q
    ||||||| |||| |||||| ||||| |||||||| ||||||||||||| ||||||||| |||||||| ||||||||||||||||||    
T  35691516 aaattcaaggacaaaatagctatttcgcaaaatttagagacgaatttgaccgatttttgaaaattcaaggacgaatttgaggtatt 35691431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 58 - 241
Target Start/End: Complemental strand, 2167700 - 2167516
Alignment:
Q  58 tccatcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacacagcatgcaaga-gatacgtcatcaccactaacggaggtttt 156  Q
    |||||||| |||||||||| || |||||||  ||| ||| |||||||||||||||||||| |||||| |  || |||||| ||   |||| ||||   ||    
T  2167700 tccatcaaattagtccttgaacgcgtggctttctttttgccacgtgtacaagacaacacatcatgcagggtgacacgtcagcatggctaatggagcactt 2167601  T
Q  157 ggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatattttgcaaaattcagagacgaatttggccga 241  Q
    ||||||||||||| ||||||||| ||||||  ||||||||||||||| | ||||||| ||| |||| || || ||||||| ||||    
T  2167600 ggacggagggacctttttgatgggcgtctgacaaattcagggactaagttgatatttcgcataattgagggatgaatttgaccga 2167516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 45 - 200
Target Start/End: Complemental strand, 6057000 - 6056844
Alignment:
Q  45 aatttttaccatttccatcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacacagcatgcaaga-gatacgtcatcaccac 143  Q
    |||||||| | |||||||||| || ||||||||| |||||||| |||||| ||||||||||||| ||||||   |||||| || || |  ||| || |||    
T  6057000 aatttttagcgtttccatcaaattggtccttgtagacgtggcttccttgtagacacgtgtacaatacaacaggacatgcaggacgacagctcagcagcac 6056901  T
Q  144 taacggaggttttggacggagggaccattttgatggacgtctgtaaaattcagggac 200  Q
    ||||||||  |||||||||| |||| |||||||||||||| ||| ||||||| ||||    
T  6056900 taacggagcatttggacggaaggactattttgatggacgtttgttaaattcaaggac 6056844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 189 - 278
Target Start/End: Original strand, 20479719 - 20479808
Alignment:
Q  189 aaattcagggactaaatagatattttgcaaaattcagagacgaatttggccgattttttaaaattcagggacgaatttgaggtattagtc 278  Q
    ||||||||||||||| | ||||||| | ||||||||| |||||| ||||||||||||| |||||||| |||| | |||||||||||||||    
T  20479719 aaattcagggactaatttgatatttcgaaaaattcagggacgaaattggccgatttttcaaaattcaaggactattttgaggtattagtc 20479808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 73 - 236
Target Start/End: Complemental strand, 11682987 - 11682823
Alignment:
Q  73 cttgtacacgtggctgccttgttgacacgtgtacaagacaacacagcatgcaaga-gatacgtcatcaccactaacggaggttttggacggagggaccat 171  Q
    |||||| ||||||||| |||| ||||| |||||||| ||| |||||||| ||||| || || |||||||||||||| |||   |||||||||||||| |     
T  11682987 cttgtatacgtggctgacttgatgacatgtgtacaacacatcacagcattcaagaagacacctcatcaccactaacagagagattggacggagggactaa 11682888  T
Q  172 tttgatggacgtctgtaaaattcagggactaaatagatattttgcaaaattcagagacgaatttg 236  Q
     |||||||||||||    |||||| ||||||| | ||||||||||| |||| || ||||| ||||    
T  11682887 attgatggacgtctaacgaattcaaggactaatttgatattttgcataattgagggacgattttg 11682823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 57 - 268
Target Start/End: Complemental strand, 27955592 - 27955380
Alignment:
Q  57 ttccatcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacacagcatgcaaga-gatacgtcatcaccactaacggaggttt 155  Q
    ||||||||| || ||||||| |||| ||||| |||||||| || ||||||||||||||||| ||||||  | || || ||| ||  ||||||||||   |    
T  27955592 ttccatcaaattggtccttgaacacatggcttccttgttgccaagtgtacaagacaacacaacatgcagcacgacacatcagcatgactaacggagcact 27955493  T
Q  156 tggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatattttgcaaaattcagagacgaatttggccgattttttaaaattca 255  Q
    ||||||||||||||  |||||||||||||||  ||||||||  | ||| | ||||||| | |||||| || || |||||| || |||   | ||||||||    
T  27955492 tggacggagggacctctttgatggacgtctgacaaattcagaaattaagttgatatttcgtaaaattgagggatgaatttagctgatccgtaaaaattca 27955393  T
Q  256 gggacgaatttga 268  Q
     ||||||||||||    
T  27955392 aggacgaatttga 27955380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 58 - 235
Target Start/End: Complemental strand, 23954026 - 23953848
Alignment:
Q  58 tccatcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacacagcatgca-agagatacgtcatcaccactaacggaggtttt 156  Q
    |||||||| |||||||| | |||||||||| |||| ||| |||||||||||||||||||| ||||||  | || |  ||| ||   |||||||||   ||    
T  23954026 tccatcaaattagtcctggaacacgtggcttcctttttgccacgtgtacaagacaacacaacatgcatggcgacatatcagcatggctaacggagcactt 23953927  T
Q  157 ggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatattttgcaaaattcagagacgaattt 235  Q
    ||||||||||||| ||||||| ||||||||  ||||||| ||||||| | ||||||| ||| |||| |  |||||||||    
T  23953926 ggacggagggacctttttgattgacgtctgacaaattcacggactaagttgatatttcgcataattgatggacgaattt 23953848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 217 - 278
Target Start/End: Original strand, 23906295 - 23906356
Alignment:
Q  217 aaaattcagagacgaatttggccgattttttaaaattcagggacgaatttgaggtattagtc 278  Q
    |||||| || ||||||||||||||||||||||||||||| ||| ||||||||||||||||||    
T  23906295 aaaatttagggacgaatttggccgattttttaaaattcaaggaggaatttgaggtattagtc 23906356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 56 - 200
Target Start/End: Complemental strand, 31913692 - 31913547
Alignment:
Q  56 tttccatcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacacagcatgcaaga-gatacgtcatcaccactaacggaggtt 154  Q
    |||| ||||| || |||||||||||||||||| |||||| ||||||||| ||||||||||   |||||| || || |  ||| || |||||||||||  |    
T  31913692 tttcaatcaaattggtccttgtacacgtggcttccttgtagacacgtgtgcaagacaacaagccatgcaggacgacaactcagcaacactaacggagcat 31913593  T
Q  155 ttggacggagggaccattttgatggacgtctgtaaaattcagggac 200  Q
    ||||||||| | || |||||||||||||| |||  |||||||||||    
T  31913592 ttggacggaagaactattttgatggacgtttgttgaattcagggac 31913547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 201 - 278
Target Start/End: Complemental strand, 38549624 - 38549547
Alignment:
Q  201 taaatagatattttgcaaaattcagagacgaatttggccgattttttaaaattcagggacgaatttgaggtattagtc 278  Q
    |||||||||||||  |||||||||| |||||| ||||| ||||||| |||||||| |||||||||| |||||||||||    
T  38549624 taaatagatatttcacaaaattcagggacgaacttggctgatttttgaaaattcaaggacgaatttaaggtattagtc 38549547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 48 - 268
Target Start/End: Original strand, 47341575 - 47341800
Alignment:
Q  48 ttttaccatttccatcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacacagcatgca-----agagatacgtcatcacca 142  Q
    |||| ||| ||| ||||| |||||||||| |||||||||| |||| ||| |||||||||||||||||||||||||||      | || | |||  ||       
T  47341575 tttttccaattcaatcaaattagtccttgaacacgtggcttccttcttgccacgtgtacaagacaacacagcatgcatgcagggcgacatgtccccatgg 47341674  T
Q  143 ctaacggaggttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatattttgcaaaattcagagacgaatttggccgat 242  Q
    |||||||||   ||||||||||  ||| |||||||  |||||||  ||||||||||||||| | ||||||| ||| |||| || || ||||||||||||     
T  47341675 ctaacggagcacttggacggagatacctttttgattaacgtctgacaaattcagggactaagttgatatttcgcataattgagggatgaatttggccgac 47341774  T
Q  243 tttttaaaattcagggacgaatttga 268  Q
       | |||||||| ||||||||||||    
T  47341775 ccgtgaaaattcaaggacgaatttga 47341800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 45 - 124
Target Start/End: Complemental strand, 13034907 - 13034828
Alignment:
Q  45 aatttttaccatttccatcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacacagcatgca 124  Q
    |||||||| | ||||||| || || ||||||||||||||||||| || | ||||||||||||| ||||||||||||||||    
T  13034907 aatttttaacgtttccatgaaattggtccttgtacacgtggctgactagatgacacgtgtacaggacaacacagcatgca 13034828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 218 - 277
Target Start/End: Complemental strand, 29994966 - 29994907
Alignment:
Q  218 aaattcagagacgaatttggccgattttttaaaattcagggacgaatttgaggtattagt 277  Q
    |||||||| |||||| ||||||||||||| |||||||| |||||||||||||||||||||    
T  29994966 aaattcagggacgaaattggccgatttttcaaaattcaaggacgaatttgaggtattagt 29994907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 56 - 205
Target Start/End: Complemental strand, 23962527 - 23962377
Alignment:
Q  56 tttccatcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacacagcatgcaag-agatacgtcatcaccactaacggaggtt 154  Q
    |||| ||||| || ||||||||||| |||||| |||||| | ||||||||||||||||||   |||||| | ||| |  ||| || |||||||||||  |    
T  23962527 tttcaatcaaattggtccttgtacatgtggcttccttgtaggcacgtgtacaagacaacaagccatgcaggaagacaactcagcagcactaacggagcat 23962428  T
Q  155 ttggacggagggaccattttgatggacgtctgtaaaattcagggactaaat 205  Q
    || |||||| |||| |||||||| ||||| ||| |||||||||||| ||||    
T  23962427 tttgacggaaggactattttgattgacgtttgttaaattcagggacaaaat 23962377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 192 - 278
Target Start/End: Original strand, 45361279 - 45361365
Alignment:
Q  192 ttcagggactaaatagatattttgcaaaattcagagacgaatttggccgattttttaaaattcagggacgaatttgaggtattagtc 278  Q
    |||| ||||||||||  |||||||||||||||||  || || ||| || ||||||||||||||| ||| ||||||||||||||||||    
T  45361279 ttcaaggactaaataactattttgcaaaattcaggaacaaaattgacccattttttaaaattcaaggaagaatttgaggtattagtc 45361365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 56 - 122
Target Start/End: Complemental strand, 48704403 - 48704337
Alignment:
Q  56 tttccatcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacacagcatg 122  Q
    |||||||||| || ||||||||||||||| || ||||||||||||||||||| ||||||||| ||||    
T  48704403 tttccatcaaattggtccttgtacacgtgacttccttgttgacacgtgtacacgacaacacaacatg 48704337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 188 - 269
Target Start/End: Original strand, 13039641 - 13039722
Alignment:
Q  188 aaaattcagggactaaatagatattttgcaaaattcagagacgaatttggccgattttttaaaattcagggacgaatttgag 269  Q
    |||||||||||||||||||| ||||| |||||||| || ||||||||||   ||||||| |||||||| ||||||| |||||    
T  13039641 aaaattcagggactaaatagttatttcgcaaaatttagggacgaatttgattgatttttgaaaattcaaggacgaacttgag 13039722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 56 - 117
Target Start/End: Complemental strand, 34691197 - 34691136
Alignment:
Q  56 tttccatcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacaca 117  Q
    |||||||||||||| ||| ||||||||||||| |||||||| |||||||||||| |||||||    
T  34691197 tttccatcaatttaatccctgtacacgtggcttccttgttgccacgtgtacaagccaacaca 34691136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 195 - 279
Target Start/End: Original strand, 46439539 - 46439623
Alignment:
Q  195 agggactaaatagatattttgcaaaattcagagacgaatttggccgattttttaaaattcagggacgaatttgaggtattagtct 279  Q
    ||||||||||||||||||| |||||||| | |||| | ||||  |||||||| ||||||||  |||||||||||| |||||||||    
T  46439539 agggactaaatagatatttcgcaaaatttaaagacaagtttgatcgatttttaaaaattcaatgacgaatttgagatattagtct 46439623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 159 - 238
Target Start/End: Original strand, 35344295 - 35344374
Alignment:
Q  159 acggagggaccattttgatggacgtctgtaaaattcagggactaaatagatattttgcaaaattcagagacgaatttggc 238  Q
    ||||||||||| |||||||||||||||   ||||||||||| ||||| ||||||| ||| |||| || ||||||||||||    
T  35344295 acggagggacctttttgatggacgtcttataaattcagggattaaattgatatttcgcataattgagggacgaatttggc 35344374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 188 - 275
Target Start/End: Complemental strand, 37791744 - 37791657
Alignment:
Q  188 aaaattcagggactaaatagatattttgcaaaattcagagacgaatttggccgattttttaaaattcagggacgaatttgaggtatta 275  Q
    |||||| ||||||||||||||||||| ||||||||  | || ||||||||| |||||||||||||| |  |||||| || ||||||||    
T  37791744 aaaatttagggactaaatagatatttggcaaaatttggggatgaatttggctgattttttaaaatttaaagacgaagtttaggtatta 37791657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 61 - 238
Target Start/End: Original strand, 8423187 - 8423365
Alignment:
Q  61 atcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacacagcatgcaaga-gatacgtcatcaccactaacggaggttttgga 159  Q
    ||||| || |||| || |||||||||| |||| ||| |||| |||||||||| |||||||||||||  || | |||| ||   |||||||||    |  |    
T  8423187 atcaaattcgtccctgaacacgtggcttccttcttgccacgcgtacaagacagcacagcatgcaaggcgacatgtcagcatggctaacggagcccgttaa 8423286  T
Q  160 cggagggaccattttgatggacgtctgtaaaattcagggactaaatagatattttgcaaaattcagagacgaatttggc 238  Q
    |||||||||| ||||||| ||||||||  ||||||||||| ||||| ||||||| ||| |||| || ||| ||||||||    
T  8423287 cggagggacctttttgattgacgtctgataaattcagggattaaattgatatttcgcataattgagggacaaatttggc 8423365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 26 - 88
Target Start/End: Complemental strand, 20478254 - 20478192
Alignment:
Q  26 actgaaaagttaagtctcgaatttttaccatttccatcaatttagtccttgtacacgtggctg 88  Q
    ||||||| ||||| | ||||||||| || |||||||||| |||||||||||||||||||||||    
T  20478254 actgaaatgttaaatatcgaattttgacaatttccatcagtttagtccttgtacacgtggctg 20478192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 45 - 115
Target Start/End: Original strand, 46867825 - 46867895
Alignment:
Q  45 aatttttaccatttccatcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaaca 115  Q
    |||||||| | |||||||||| || ||||||||||| |||||| |||||  ||||||||||||||||||||    
T  46867825 aatttttagcgtttccatcaaattggtccttgtacatgtggcttccttgaagacacgtgtacaagacaaca 46867895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 68 - 268
Target Start/End: Original strand, 46812495 - 46812696
Alignment:
Q  68 tagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacacagcatgcaaga-gatacgtcatcaccactaacggaggttttggacggaggg 166  Q
    ||||||||| |||||||||| |||| ||| |||  |||||||||||||||||||||| |  || |  ||| ||   ||||| |||   |||||||||  |    
T  46812495 tagtccttgaacacgtggcttccttcttgccacacgtacaagacaacacagcatgcagggcgacatatcagcatggctaacagagcacttggacggaatg 46812594  T
Q  167 accattttgatggacgtctgtaaaattcagggactaaatagatattttgcaaaattcagagacgaatttggccgattttttaaaattcagggacgaattt 266  Q
    ||| ||||||||||||||||  ||||| ||||||||||| |||||||  |  |||| || || |||||||||||| |  | |||||||| ||||||| ||    
T  46812595 acctttttgatggacgtctgacaaatttagggactaaattgatatttcacgtaattgagggatgaatttggccgactcgtaaaaattcaaggacgaagtt 46812694  T
Q  267 ga 268  Q
    ||    
T  46812695 ga 46812696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 141 - 268
Target Start/End: Complemental strand, 45463807 - 45463680
Alignment:
Q  141 cactaacggaggttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatattttgcaaaattcagagacgaatttggccg 240  Q
    ||||||||||  |||||||||||||||| |  ||||||||||||    ||||||||||||||  | ||||||| |  ||||| || ||||||||||||||    
T  45463807 cactaacggaccttttggacggagggacgaaattgatggacgtcaaacaaattcagggactattttgatatttcgttaaatttagggacgaatttggccg 45463708  T
Q  241 attttttaaaattcagggacgaatttga 268  Q
    |    | |||||||||||||||| ||||    
T  45463707 acccctgaaaattcagggacgaaattga 45463680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 56 - 213
Target Start/End: Complemental strand, 366921 - 366763
Alignment:
Q  56 tttccatcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacacagcatgcaaga-gatacgtcatcaccactaacggaggtt 154  Q
    |||||||||| || |||||| |||||||||||| |  | ||||| ||| |||  |||||||| ||||||  | || | |||| |  ||||||||| ||      
T  366921 tttccatcaaattggtccttctacacgtggctgacgggatgacatgtggacatcacaacacaacatgcataacgacatgtcagcctcactaacggtggga 366822  T
Q  155 ttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatattt 213  Q
    |||||||||||||  | |||||| ||||||||| ||||||||||||||| | |||||||    
T  366821 ttggacggagggatgaatttgatagacgtctgttaaattcagggactaatttgatattt 366763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 56 - 213
Target Start/End: Complemental strand, 7402116 - 7401958
Alignment:
Q  56 tttccatcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacacagcatgca-agagatacgtcatcaccactaacggaggtt 154  Q
    ||||| |||| || ||| ||||||||||||||| || | |||| ||||||||| ||| |||| |||| | || |  || ||| || ||||||||||| |     
T  7402116 tttccgtcaaattggtctttgtacacgtggctgactggatgacgcgtgtacaacacagcacaacatgaagagcggcacctcagcatcactaacggagata 7402017  T
Q  155 ttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatattt 213  Q
    ||||| |||| ||  | |||||||||||||||| |||||||||||| || | |||||||    
T  7402016 ttggatggagtgatgaatttgatggacgtctgttaaattcagggacgaatttgatattt 7401958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 58 - 124
Target Start/End: Complemental strand, 38613684 - 38613618
Alignment:
Q  58 tccatcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacacagcatgca 124  Q
    |||||||| |||||||||| ||||||||||  ||| ||  |||||||||||||||||||| ||||||    
T  38613684 tccatcaagttagtccttgaacacgtggctttctttttcccacgtgtacaagacaacacaccatgca 38613618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 61 - 222
Target Start/End: Complemental strand, 40784564 - 40784402
Alignment:
Q  61 atcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacacagcatgcaaga-gatacgtcatcaccactaacggaggttttgga 159  Q
    ||||| |||||||||| ||| |||||| |||| ||| |||||||| ||||||||||| |||||| || || |  ||| ||  | |||| | |  ||||||    
T  40784564 atcaaattagtccttgaacatgtggcttccttcttgccacgtgtataagacaacacaacatgcaggacgacagatcagcatgattaacagcgcatttgga 40784465  T
Q  160 cggagggaccattttgatggacgtctgtaaaattcagggactaaatagatattttgcaaaatt 222  Q
    |||||||||| |||||||||| |||||  |||||||  |||||| | ||||||| ||| ||||    
T  40784464 cggagggacctttttgatggatgtctgacaaattcaaagactaagttgatatttcgcataatt 40784402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 57 - 122
Target Start/End: Complemental strand, 2492548 - 2492483
Alignment:
Q  57 ttccatcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacacagcatg 122  Q
    ||||||||| |||||||||| ||||||| || |||| ||| ||||||||||||||| || ||||||    
T  2492548 ttccatcaaattagtccttgaacacgtgacttcctttttgccacgtgtacaagacagcagagcatg 2492483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 56 - 117
Target Start/End: Complemental strand, 45463872 - 45463811
Alignment:
Q  56 tttccatcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacaca 117  Q
    |||||||||||||||||| |||||||||||||  ||| ||  |||||||||||| |||||||    
T  45463872 tttccatcaatttagtccctgtacacgtggctttctttttcccacgtgtacaagccaacaca 45463811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #72
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 56 - 120
Target Start/End: Original strand, 4322494 - 4322558
Alignment:
Q  56 tttccatcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacacagca 120  Q
    |||||||||||||||||| |||||||||| ||  ||| ||  |||||||||||| ||||||||||    
T  4322494 tttccatcaatttagtccctgtacacgtgactttctttttcccacgtgtacaagccaacacagca 4322558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #73
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 56 - 120
Target Start/End: Original strand, 48303571 - 48303635
Alignment:
Q  56 tttccatcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacacagca 120  Q
    |||| ||||||||||||| |||||||||||||  ||| ||  |||||||||||| ||||||||||    
T  48303571 tttctatcaatttagtccctgtacacgtggctttctttttcccacgtgtacaagccaacacagca 48303635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #74
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 189 - 268
Target Start/End: Complemental strand, 46810794 - 46810715
Alignment:
Q  189 aaattcagggactaaatagatattttgcaaaattcagagacgaatttggccgattttttaaaattcagggacgaatttga 268  Q
    ||||||||||| ||||| ||||||| ||| |||| || ||| ||||||||||||   | |||||||||||||||| ||||    
T  46810794 aaattcagggattaaattgatatttcgcataattgagggactaatttggccgatccgtgaaaattcagggacgaagttga 46810715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #75
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 171 - 241
Target Start/End: Original strand, 38613498 - 38613568
Alignment:
Q  171 ttttgatggacgtctgtaaaattcagggactaaatagatattttgcaaaattcagagacgaatttggccga 241  Q
    |||| |||||||||||  ||||||||||||||| | ||||||| ||| |||| || || ||||||||||||    
T  38613498 tttttatggacgtctgacaaattcagggactaagttgatatttcgcataattgagggatgaatttggccga 38613568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #76
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 279 - 309
Target Start/End: Complemental strand, 39426318 - 39426288
Alignment:
Q  279 tatcatatttcttttaatttcttcttataca 309  Q
    |||||||||||||||||||||||||||||||    
T  39426318 tatcatatttcttttaatttcttcttataca 39426288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #77
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 61 - 126
Target Start/End: Original strand, 35344196 - 35344261
Alignment:
Q  61 atcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacacagcatgcaag 126  Q
    ||||| || |||| || |||||||||| |||| ||| |||| |||||||||| |||||||||||||    
T  35344196 atcaaattcgtccctgaacacgtggcttccttcttgccacgcgtacaagacagcacagcatgcaag 35344261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #78
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 189 - 241
Target Start/End: Complemental strand, 8421505 - 8421453
Alignment:
Q  189 aaattcagggactaaatagatattttgcaaaattcagagacgaatttggccga 241  Q
    ||||||||||| ||||| ||||||| ||| |||| || |||||||||||||||    
T  8421505 aaattcagggattaaattgatatttcgcataattgagggacgaatttggccga 8421453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #79
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 155 - 203
Target Start/End: Original strand, 19712264 - 19712312
Alignment:
Q  155 ttggacggagggaccattttgatggacgtctgtaaaattcagggactaa 203  Q
    |||||||| ||||||||||||||||||||||   |||||||| ||||||    
T  19712264 ttggacggtgggaccattttgatggacgtctaataaattcagagactaa 19712312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #80
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 156 - 200
Target Start/End: Original strand, 31915040 - 31915084
Alignment:
Q  156 tggacggagggaccattttgatggacgtctgtaaaattcagggac 200  Q
    |||||| |||||| |||||||||||||| ||| ||||||||||||    
T  31915040 tggacgtagggactattttgatggacgtttgttaaattcagggac 31915084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1454 (Bit Score: 198; Significance: 1e-108; HSPs: 1)
Name: scaffold1454
Description:

Target: scaffold1454; HSP #1
Raw Score: 198; E-Value: 1e-108
Query Start/End: Original strand, 14 - 275
Target Start/End: Complemental strand, 1527 - 1266
Alignment:
Q  14 aggaaaaattatactgaaaagttaagtctcgaatttttaccatttccatcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaa 113  Q
    |||||||| |||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  1527 aggaaaaaatatattgaaaagttaagtcttgaatttttaccatttccatcaatttagtccttgtacacgtggttgccttgttgacacgtgtacaagacaa 1428  T
Q  114 cacagcatgcaagagatacgtcatcaccactaacggaggttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatattt 213  Q
    ||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1427 cacagcatgcaagggatacgtcatcaccactaacggagcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatattt 1328  T
Q  214 tgcaaaattcagagacgaatttggccgattttttaaaattcagggacgaatttgaggtatta 275  Q
       ||||||||  |||||||||  || ||||||||||||||| ||||| |||||||||||||    
T  1327 cataaaattcatggacgaatttaaccaattttttaaaattcaaggacggatttgaggtatta 1266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 185; Significance: 1e-100; HSPs: 46)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 14 - 277
Target Start/End: Complemental strand, 11355487 - 11355223
Alignment:
Q  14 aggaaaaattatactgaaaagttaagtctcgaatttttaccatttccatcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaa 113  Q
    ||||||||||| ||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||    
T  11355487 aggaaaaattacactgaaaagttaaatctcgaatttttaccatttccatcaaattagtccttgtacacgtggctgccttgttgacacgtgtacatgacaa 11355388  T
Q  114 cacagcatgcaagag-atacgtcatcaccactaacggaggttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatatt 212  Q
    |||| |||||||||| | ||||||||||||||| ||||| ||||||||||||||||||||||| ||| ||||||||||||||||||| | ||||||||||    
T  11355387 cacaacatgcaagaggacacgtcatcaccactaccggagcttttggacggagggaccattttggtggccgtctgtaaaattcagggagttaatagatatt 11355288  T
Q  213 ttgcaaaattcagagacgaatttggccgattttttaaaattcagggacgaatttgaggtattagt 277  Q
    |   ||||||||| |||||||||| |||||||||||||||||| |||||||||||||||||||||    
T  11355287 tcataaaattcagtgacgaatttgaccgattttttaaaattcaaggacgaatttgaggtattagt 11355223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 184; E-Value: 1e-99
Query Start/End: Original strand, 14 - 278
Target Start/End: Original strand, 32438943 - 32439215
Alignment:
Q  14 aggaaaaattatactgaaaagttaagtctcgaatttttaccatttccatcaatttagtccttgta--------cacgtggctgccttgttgacacgtgta 105  Q
    ||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||        |||||||||||||||||||||||||||    
T  32438943 aggaaaaattatattgaaaagttaagtctcgaaattttaccatttccatcaatttagtccttgtacacgtgtacacgtggctgccttgttgacacgtgta 32439042  T
Q  106 caagacaacacagcatgcaagagatacgtcatcaccactaacggaggttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaat 205  Q
    |||||||||||| |||||||| || |||||||||| |||||| ||  |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32439043 caagacaacacatcatgcaagggacacgtcatcactactaacagatcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaat 32439142  T
Q  206 agatattttgcaaaattcagagacgaatttggccgattttttaaaattcagggacgaatttgaggtattagtc 278  Q
    |||||||| ||||||||||| |||||||||| ||||||||||||||||||  ||| |||||||||||||||||    
T  32439143 agatatttcgcaaaattcagggacgaatttgaccgattttttaaaattcaatgactaatttgaggtattagtc 32439215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 181; E-Value: 8e-98
Query Start/End: Original strand, 14 - 277
Target Start/End: Complemental strand, 20523631 - 20523367
Alignment:
Q  14 aggaaaaattatactgaaaagttaagtctcgaatttttaccatttccatcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaa 113  Q
    ||||||||||| ||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  20523631 aggaaaaattacactgaaaagttaaatctcgaatttttaccattttcatcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaggacaa 20523532  T
Q  114 cacagcatgcaaga-gatacgtcatcaccactaacggaggttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatatt 212  Q
    ||| |||||||||| || || |||||||||||||| ||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20523531 cacggcatgcaagaagacacatcatcaccactaacagaacttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatatt 20523432  T
Q  213 ttgcaaaattcagagacgaatttggccgattttttaaaattcagggacgaatttgaggtattagt 277  Q
    | ||||||||||  |||||||||| ||||||||| |||||||  ||| |||||||| ||||||||    
T  20523431 tcgcaaaattcaaggacgaatttgaccgatttttgaaaattctaggaagaatttgatgtattagt 20523367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 172; E-Value: 2e-92
Query Start/End: Original strand, 28 - 278
Target Start/End: Complemental strand, 32517128 - 32516877
Alignment:
Q  28 tgaaaagttaagtctcgaatttttaccatttccatcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacacagcatgcaaga 127  Q
    ||||||||||| |||| ||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||| |||| |||| |||||||||    
T  32517128 tgaaaagttaaatctcaaatttttaccatttccatcaatttagtccttatacacgtggctgccttgttaacacgtgtacatgacagcacatcatgcaaga 32517029  T
Q  128 gat-acgtcatcaccactaacggaggttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatattttgcaaaattcaga 226  Q
    ||  ||||||||||||||||||||| |||||||||||||||| |||||||||||||| ||||||||||| || |||||||| ||||||| |||||||||     
T  32517028 gaacacgtcatcaccactaacggagcttttggacggagggacaattttgatggacgtatgtaaaattcaagggctaaataggtattttgtaaaattcagg 32516929  T
Q  227 gacgaatttggccgattttttaaaattcagggacgaatttgaggtattagtc 278  Q
    |||||||||| |||||||||||||||||| ||||||||||||||||||||||    
T  32516928 gacgaatttgaccgattttttaaaattcaaggacgaatttgaggtattagtc 32516877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 146; E-Value: 6e-77
Query Start/End: Original strand, 26 - 278
Target Start/End: Original strand, 13613453 - 13613706
Alignment:
Q  26 actgaaaagttaagtctcgaatttttaccatttccatcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacacagcatgcaa 125  Q
    ||||||| ||||| |||||||||||||| ||||||||||||||||||||||||||| |||||| |||| ||||||||||| | |||||||||||||| ||    
T  13613453 actgaaatgttaaatctcgaatttttacaatttccatcaatttagtccttgtacacatggctgacttgctgacacgtgtataggacaacacagcatgaaa 13613552  T
Q  126 ga-gatacgtcatcaccactaacggaggttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatattttgcaaaattca 224  Q
    || |  || ||||||||||||| |||  |||||||||||||||| | |||||||||||||||||||||||||||||||| | ||||||| ||||||||||    
T  13613553 gaagccacatcatcaccactaatggaccttttggacggagggactaatttgatggacgtctgtaaaattcagggactaatttgatatttcgcaaaattca 13613652  T
Q  225 gagacgaatttggccgattttttaaaattcagggacgaatttgaggtattagtc 278  Q
    | |||||||||| ||||||||| |||||||| |||||||||| |||||||||||    
T  13613653 gggacgaatttgaccgatttttcaaaattcaaggacgaatttaaggtattagtc 13613706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 16 - 226
Target Start/End: Complemental strand, 9398923 - 9398712
Alignment:
Q  16 gaaaaattatactgaaaagttaagtctcgaatttttaccatttccatcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaaca 115  Q
    ||||||||| ||||||||||||| |||||||||||||  |||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||    
T  9398923 gaaaaattacactgaaaagttaaatctcgaatttttataatttccatcaatttagtccttgtacacgtggctgtcttgttgacacgtgtacaggacaaca 9398824  T
Q  116 cagcatgcaaga-gatacgtcatcaccactaacggaggttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatatttt 214  Q
    || ||||||| | || || |||||||||||||||||  |||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||     
T  9398823 caacatgcaaaatgacacatcatcaccactaacggaacttttggacggagggaccattttgatgaacgtctataaaattcagggactaaatagatatttc 9398724  T
Q  215 gcaaaattcaga 226  Q
    ||||||||||||    
T  9398723 gcaaaattcaga 9398712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 143; E-Value: 4e-75
Query Start/End: Original strand, 45 - 278
Target Start/End: Complemental strand, 6899719 - 6899485
Alignment:
Q  45 aatttttaccatttccatcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacacagcatgcaagag-atacgtcatcaccac 143  Q
    ||||||||| ||||||||||| ||||||||||||||||||| ||||||||||||||||||||| || |||||| |||||||||| | || |||||| |||    
T  6899719 aatttttactatttccatcaaattagtccttgtacacgtggttgccttgttgacacgtgtacatgataacacaacatgcaagaggacacatcatcaacac 6899620  T
Q  144 taacggaggttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatattttgcaaaattcagagacgaatttggccgatt 243  Q
    |||||||| ||||||||| |||||||||||||||||| |||||||||||| |||||||||||||||||||  ||||||| ||||||||||||| | ||||    
T  6899619 taacggagcttttggacgaagggaccattttgatggatgtctgtaaaatttagggactaaatagatatttcacaaaatttagagacgaatttgactgatt 6899520  T
Q  244 ttttaaaattcagggacgaatttgaggtattagtc 278  Q
    ||| |||||||| |||| |||||||||||||||||    
T  6899519 tttgaaaattcaaggacaaatttgaggtattagtc 6899485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 143; E-Value: 4e-75
Query Start/End: Original strand, 45 - 274
Target Start/End: Complemental strand, 10568633 - 10568403
Alignment:
Q  45 aatttttaccatttccatcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacacagcatgcaagag-atacgtcatcaccac 143  Q
    ||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||| ||||||||| ||||||| || | || ||||||||||    
T  10568633 aatttttaccatttccatcaaattagtccttgtacatgtggctgccttgttgacacgtgtacatgacaacacaacatgcaaaaggacacatcatcaccac 10568534  T
Q  144 taacggaggttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatattttgcaaaattcagagacgaatttggccgatt 243  Q
    |||||||| |||||||||||||||| |||||||| |||||||||||||||||||||||||||| |||||| || |||||||  |||||||||| | ||||    
T  10568533 taacggagcttttggacggagggactattttgatagacgtctgtaaaattcagggactaaataaatatttcgctaaattcaaggacgaatttgactgatt 10568434  T
Q  244 ttttaaaattcagggacgaatttgaggtatt 274  Q
    ||| |||||||| |||||||||||| |||||    
T  10568433 tttgaaaattcaaggacgaatttgatgtatt 10568403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 45 - 200
Target Start/End: Complemental strand, 7049991 - 7049835
Alignment:
Q  45 aatttttaccatttccatcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacacagcatgcaaga-gatacgtcatcaccac 143  Q
    ||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||| ||||||||| ||||||||| || || ||||||||||    
T  7049991 aatttttaccatttccatcaaattagtccttgtacacgtggatgccttgttgacacgtgtacatgacaacacaacatgcaagaggacacatcatcaccac 7049892  T
Q  144 taacggaggttttggacggagggaccattttgatggacgtctgtaaaattcagggac 200  Q
     ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  7049891 gaacggagcttttggacggagggaccattttgatggacgtctgtaaaattcagggac 7049835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 48 - 263
Target Start/End: Original strand, 14338368 - 14338584
Alignment:
Q  48 ttttaccatttccatcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacacagcatgcaaga-gatacgtcatcaccactaa 146  Q
    |||||||||||||||||| || |||||||||||||||||| ||||||||||||||||||| ||||||||| ||||||| | ||||| |||||| || |||    
T  14338368 ttttaccatttccatcaaattggtccttgtacacgtggcttccttgttgacacgtgtacaggacaacacatcatgcaacaggatacatcatcatcagtaa 14338467  T
Q  147 cggaggttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatattttgcaaaattcagagacgaatttggccgattttt 246  Q
    ||||| ||||| ||||||||||||||||||||||||||||| |||||||||||  || |||| |||| ||||||||    |||||||||||| |||||||    
T  14338468 cggagcttttgaacggagggaccattttgatggacgtctgtgaaattcagggatgaattagacatttcgcaaaatttgaggacgaatttggctgattttt 14338567  T
Q  247 taaaattcagggacgaa 263  Q
     |||||||| |||||||    
T  14338568 aaaaattcaaggacgaa 14338584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 67 - 275
Target Start/End: Original strand, 7372881 - 7373079
Alignment:
Q  67 ttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacacagcatgcaagag-atacgtcatcaccactaacggaggttttggacggagg 165  Q
    ||||||||||||||||||||||||||||||||||           ||||||||||  ||||| | || ||||||||||||| |||| |||||||||||||    
T  7372881 ttagtccttgtacacgtggctgccttgttgacac-----------aacacagcatataagagcacacatcatcaccactaatggagcttttggacggagg 7372969  T
Q  166 gaccattttgatggacgtctgtaaaattcagggactaaatagatattttgcaaaattcagagacgaatttggccgattttttaaaattcagggacgaatt 265  Q
    ||||||||||||||||| ||||||||||||||||||||||| |||||| ||||||||||| |||||||||| || |||||| ||||||||   |||||||    
T  7372970 gaccattttgatggacgcctgtaaaattcagggactaaataaatatttcgcaaaattcagggacgaatttgaccaatttttaaaaattcaatcacgaatt 7373069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 197 - 281
Target Start/End: Original strand, 10569927 - 10570011
Alignment:
Q  197 ggactaaatagatattttgcaaaattcagagacgaatttggccgattttttaaaattcagggacgaatttgaggtattagtctat 281  Q
    ||||||||||||||||||||||||||||  |||||||||||| |||||||||||||||| |||||||||||||||||||||||||    
T  10569927 ggactaaatagatattttgcaaaattcatggacgaatttggctgattttttaaaattcaaggacgaatttgaggtattagtctat 10570011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 134 - 260
Target Start/End: Complemental strand, 3456892 - 3456766
Alignment:
Q  134 tcatcaccactaacggaggttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatattttgcaaaattcagagacgaat 233  Q
    ||||||| | |||||||  ||||||||||||||||   ||||||||||||||| |||||||||||||||| | ||||||| | ||||||||| ||||||     
T  3456892 tcatcactattaacggatattttggacggagggactgatttgatggacgtctgcaaaattcagggactaatttgatatttcgaaaaattcagggacgaaa 3456793  T
Q  234 ttggccgattttttaaaattcagggac 260  Q
    ||||||||||||| |||||||| ||||    
T  3456792 ttggccgatttttcaaaattcaaggac 3456766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 189 - 279
Target Start/End: Original strand, 11357194 - 11357284
Alignment:
Q  189 aaattcagggactaaatagatattttgcaaaattcagagacgaatttggccgattttttaaaattcagggacgaatttgaggtattagtct 279  Q
    ||||||||||||||||| | |||||| |||||||||| |||||||||| |||||||||||||||||| |||||||||||| ||||||||||    
T  11357194 aaattcagggactaaattgctatttttcaaaattcagggacgaatttgaccgattttttaaaattcaaggacgaatttgatgtattagtct 11357284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 144 - 278
Target Start/End: Original strand, 32455881 - 32456015
Alignment:
Q  144 taacggaggttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatattttgcaaaattcagagacgaatttggccgatt 243  Q
    |||||||  ||||||||||||||||   ||||||||||||||| ||||||||| |||||| | ||||||| | ||||||||| |||||| ||| ||||||    
T  32455881 taacggacattttggacggagggactgatttgatggacgtctgcaaaattcagtgactaatttgatatttcgaaaaattcagggacgaaattgaccgatt 32455980  T
Q  244 ttttaaaattcagggacgaatttgaggtattagtc 278  Q
    ||| |||||||| |||| | |||||||||||||||    
T  32455981 tttcaaaattcaaggactattttgaggtattagtc 32456015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 189 - 279
Target Start/End: Original strand, 32518497 - 32518587
Alignment:
Q  189 aaattcagggactaaatagatattttgcaaaattcagagacgaatttggccgattttttaaaattcagggacgaatttgaggtattagtct 279  Q
    ||||||||||||||| | ||||||| ||||||||||| || ||| ||||||||||||| |||||||| |||||||||||||||||||||||    
T  32518497 aaattcagggactaatttgatatttcgcaaaattcagggatgaaattggccgatttttcaaaattcaaggacgaatttgaggtattagtct 32518587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 189 - 279
Target Start/End: Original strand, 18645104 - 18645193
Alignment:
Q  189 aaattcagggactaaatagatattttgcaaaattcagagacgaatttggccgattttttaaaattcagggacgaatttgaggtattagtct 279  Q
    ||||||| ||||||| | ||||||| |||||||||||||||||||| | ||||||||| |||||||| |||||||||||||||||||||||    
T  18645104 aaattcatggactaatttgatatttcgcaaaattcagagacgaatt-gtccgatttttcaaaattcaaggacgaatttgaggtattagtct 18645193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 59 - 263
Target Start/End: Original strand, 3018336 - 3018541
Alignment:
Q  59 ccatcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacacagcatgcaaga-gatacgtcatcaccactaacggaggttttg 157  Q
    ||||||| || |||| || ||| |||||| || | ||| |||| ||||||||||||||| ||||||||| ||||  ||| ||   |||||||||   |||    
T  3018336 ccatcaaattcgtccctgaacatgtggcttccgtcttgccacgcgtacaagacaacacatcatgcaagacgatagatcaacatggctaacggagcacttg 3018435  T
Q  158 gacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatattttgcaaaattcagagacgaatttggccgattttttaaaattcagg 257  Q
    || ||||||||| ||||||||||||||||  ||||||||||||||| | ||||||| ||| |||| || |||||| ||||||||    | ||||||||||    
T  3018436 gatggagggacctttttgatggacgtctgacaaattcagggactaagttgatatttcgcataattgagggacgaagttggccgacgcgtgaaaattcagg 3018535  T
Q  258 gacgaa 263  Q
    ||||||    
T  3018536 gacgaa 3018541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 189 - 278
Target Start/End: Complemental strand, 7371264 - 7371175
Alignment:
Q  189 aaattcagggactaaatagatattttgcaaaattcagagacgaatttggccgattttttaaaattcagggacgaatttgaggtattagtc 278  Q
    ||||||| |||| |||||  ||||| ||||||||||| ||| |||||||||||||||| |||||||| ||||||| ||||||||||||||    
T  7371264 aaattcaaggacaaaatatctatttcgcaaaattcagggaccaatttggccgatttttgaaaattcaaggacgaagttgaggtattagtc 7371175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 189 - 278
Target Start/End: Original strand, 9400035 - 9400124
Alignment:
Q  189 aaattcagggactaaatagatattttgcaaaattcagagacgaatttggccgattttttaaaattcagggacgaatttgaggtattagtc 278  Q
    |||||| |||||||| ||||||||| ||||||||||  || ||||||| | ||||||| |||||||| ||||||||||||||||||||||    
T  9400035 aaattcggggactaattagatatttcgcaaaattcaaggatgaatttgactgatttttcaaaattcaaggacgaatttgaggtattagtc 9400124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 189 - 278
Target Start/End: Original strand, 20525334 - 20525423
Alignment:
Q  189 aaattcagggactaaatagatattttgcaaaattcagagacgaatttggccgattttttaaaattcagggacgaatttgaggtattagtc 278  Q
    ||||||| |||| |||||| ||||||||||||||||| || ||||||| || |||||| ||||||||  |||||||||||||||||||||    
T  20525334 aaattcaaggacaaaatagctattttgcaaaattcagggatgaatttgacctatttttaaaaattcaaagacgaatttgaggtattagtc 20525423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 61 - 268
Target Start/End: Complemental strand, 29077546 - 29077338
Alignment:
Q  61 atcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacacagcatgcaaga-gatacgtcatcaccactaacggaggttttgga 159  Q
    ||||| || |||| || |||||||||| |||| ||| |||| ||||||||||||||||||||||||  || | |||| ||   |||||||||    |  |    
T  29077546 atcaaattcgtccctgaacacgtggcttccttcttgccacgcgtacaagacaacacagcatgcaaggcgacatgtcagcatggctaacggagcccgttaa 29077447  T
Q  160 cggagggaccattttgatggacgtctgtaaaattcagggactaaatagatattttgcaaaattcagagacgaatttggccgattttttaaaattcaggga 259  Q
    |||||||||| ||||||||||||||||  |||||||||||  |||| || |||| ||| |||| || ||| |||||||||||    | ||||||||||||    
T  29077446 cggagggacctttttgatggacgtctgacaaattcagggatgaaattgaaatttcgcataattgagggactaatttggccgacgcgtgaaaattcaggga 29077347  T
Q  260 cgaatttga 268  Q
    |||||||||    
T  29077346 cgaatttga 29077338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 199 - 278
Target Start/End: Original strand, 7051255 - 7051334
Alignment:
Q  199 actaaatagatattttgcaaaattcagagacgaatttggccgattttttaaaattcagggacgaatttgaggtattagtc 278  Q
    ||||||||||||||| |||||||||||||||||||||| | ||||||||||||||||    ||||||| |||||||||||    
T  7051255 actaaatagatatttcgcaaaattcagagacgaatttgactgattttttaaaattcaaattcgaatttaaggtattagtc 7051334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 213 - 280
Target Start/End: Original strand, 8605349 - 8605416
Alignment:
Q  213 ttgcaaaattcagagacgaatttggccgattttttaaaattcagggacgaatttgaggtattagtcta 280  Q
    |||||||||| || |||||||||||| ||||||| |||||||| ||||||||||||||||||||||||    
T  8605349 ttgcaaaatttagggacgaatttggctgatttttgaaaattcaaggacgaatttgaggtattagtcta 8605416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 197 - 279
Target Start/End: Original strand, 6902906 - 6902987
Alignment:
Q  197 ggactaaatagatattttgcaaaattcagagacgaatttggccgattttttaaaattcagggacgaatttgaggtattagtct 279  Q
    ||||||||||||||||  |||||||| || |||||||||| | ||||||| |||||||| |||||||||||||||||||||||    
T  6902906 ggactaaatagatattc-gcaaaatttagggacgaatttgactgatttttgaaaattcaaggacgaatttgaggtattagtct 6902987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 189 - 278
Target Start/End: Original strand, 3480657 - 3480746
Alignment:
Q  189 aaattcagggactaaatagatattttgcaaaattcagagacgaatttggccgattttttaaaattcagggacgaatttgaggtattagtc 278  Q
    ||||||||||||||  | ||||||| | ||||||||| |||||| ||||||||||||| |||||||| |||| | |||||||||||||||    
T  3480657 aaattcagggactagtttgatatttcgaaaaattcagggacgaaattggccgatttttcaaaattcaaggactattttgaggtattagtc 3480746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 45 - 122
Target Start/End: Complemental strand, 24662692 - 24662615
Alignment:
Q  45 aatttttaccatttccatcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacacagcatg 122  Q
    |||||| | |||||||||||| || | ||||||||||||| || ||||||||||||||||||||||||||||| ||||    
T  24662692 aattttcatcatttccatcaaattggcccttgtacacgtgtcttccttgttgacacgtgtacaagacaacacaacatg 24662615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 54 - 222
Target Start/End: Complemental strand, 30891349 - 30891180
Alignment:
Q  54 catttccatcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacacagcatgca-agagatacgtcatcaccactaacggagg 152  Q
    |||||||||||| || ||||||||||||||||||   ||||||||||||||||||||||| ||  ||||||  | || |  | || | ||||||  |||     
T  30891349 catttccatcaaattggtccttgtacacgtggcttgtttgttgacacgtgtacaagacaagactacatgcagggtgacaaattataagcactaatagagc 30891250  T
Q  153 ttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatattttgcaaaatt 222  Q
     ||||||||||||||| | |||| ||||||||||  ||||||||||||||||   |||||||||| ||||    
T  30891249 atttggacggagggactactttgttggacgtctgacaaattcagggactaaacgtatattttgcataatt 30891180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 189 - 278
Target Start/End: Complemental strand, 32454337 - 32454248
Alignment:
Q  189 aaattcagggactaaatagatattttgcaaaattcagagacgaatttggccgattttttaaaattcagggacgaatttgaggtattagtc 278  Q
    ||||||||||||||| | ||||||| | ||||||||  |||||| ||||||||||||| |||||||| |||| | |||||||||||||||    
T  32454337 aaattcagggactaatttgatatttcgaaaaattcaaggacgaaattggccgatttttcaaaattcaaggactattttgaggtattagtc 32454248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 200 - 274
Target Start/End: Complemental strand, 33276879 - 33276805
Alignment:
Q  200 ctaaatagatattttgcaaaattcagagacgaatttggccgattttttaaaattcagggacgaatttgaggtatt 274  Q
    |||||||||||||| |||||||| ||| ||||||||| | |||||||||||||||| ||||||| ||||| ||||    
T  33276879 ctaaatagatatttcgcaaaatttagaaacgaatttgactgattttttaaaattcaaggacgaagttgagttatt 33276805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 61 - 241
Target Start/End: Complemental strand, 4641573 - 4641392
Alignment:
Q  61 atcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacacagcatgcaag-agatacgtcatcaccactaacggaggttttgga 159  Q
    ||||| || |||| || |||||||||| |||| ||| |||| |||||||||| ||||||||||||| | | | |||| ||   |||||||||    |  |    
T  4641573 atcaaattcgtccctgaacacgtggcttccttcttgccacgcgtacaagacagcacagcatgcaaggaaacatgtcagcatggctaacggagcccgttaa 4641474  T
Q  160 cggagggaccattttgatggacgtctgtaaaattcagggactaaatagatattttgcaaaattcagagacgaatttggccga 241  Q
    |||||||||| |||||||||| |||||  ||||||||||| ||||| |||||||  || |||| || |||||||||||||||    
T  4641473 cggagggacctttttgatggaggtctgataaattcagggattaaattgatatttcacataattgagggacgaatttggccga 4641392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 197 - 278
Target Start/End: Complemental strand, 13610771 - 13610690
Alignment:
Q  197 ggactaaatagatattttgcaaaattcagagacgaatttggccgattttttaaaattcagggacgaatttgaggtattagtc 278  Q
    ||||||| | ||||||| ||||||||||| ||| ||||||  |||||||| |||||||| |||||||||| |||||||||||    
T  13610771 ggactaatttgatatttcgcaaaattcagggacaaatttgatcgatttttcaaaattcaaggacgaatttaaggtattagtc 13610690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 78 - 237
Target Start/End: Complemental strand, 2968340 - 2968180
Alignment:
Q  78 acacgtggctgccttgttgacacgtgtacaagacaacacagcatgcaaga-gatacgtcatcaccactaacggaggttttggacggagggaccattttga 176  Q
    |||||||||| |||| ||| |||| |||||||||| |||| ||||||||  || | |||| |||  |||||||||    |  ||||| ||||| ||||||    
T  2968340 acacgtggcttccttcttgccacgcgtacaagacagcacaacatgcaaggcgacatgtcagcacggctaacggagcccgttaacggatggacctttttga 2968241  T
Q  177 tggacgtctgtaaaattcagggactaaatagatattttgcaaaattcagagacgaatttgg 237  Q
    ||||||||||  ||||||||||| ||||| ||||||| ||| |||| || |||||||||||    
T  2968240 tggacgtctgataaattcagggattaaattgatatttcgcataattgagggacgaatttgg 2968180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 44 - 199
Target Start/End: Original strand, 25171998 - 25172154
Alignment:
Q  44 gaatttttaccatttccatcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacacagcatgcaaga-gatacgtcatcacca 142  Q
    ||||||||| | ||| |||||| || ||||||||||| ||| || |||||||||||||||||||||||||||   |||||| ||  | |  ||| ||  |    
T  25171998 gaatttttagcgttttcatcaaattggtccttgtacatgtgacttccttgttgacacgtgtacaagacaacatgacatgcaggacaacaactcaacaata 25172097  T
Q  143 ctaacggaggttttggacggagggaccattttgatggacgtctgtaaaattcaggga 199  Q
    |||| ||||  |||||||||| |||| ||||| |||||||| ||| |||||||||||    
T  25172098 ctaatggagcatttggacggaaggactatttttatggacgtttgttaaattcaggga 25172154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 210 - 278
Target Start/End: Complemental strand, 32437208 - 32437140
Alignment:
Q  210 attttgcaaaattcagagacgaatttggccgattttttaaaattcagggacgaatttgaggtattagtc 278  Q
    |||| ||||||||||| |||||| ||||||||||||| ||||||||  ||| |||||||||||||||||    
T  32437208 atttcgcaaaattcagggacgaaattggccgatttttcaaaattcaatgacaaatttgaggtattagtc 32437140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 26 - 88
Target Start/End: Complemental strand, 3456960 - 3456898
Alignment:
Q  26 actgaaaagttaagtctcgaatttttaccatttccatcaatttagtccttgtacacgtggctg 88  Q
    ||||||| ||||| | ||||||||| || |||||||||| |||||||||||||||||||||||    
T  3456960 actgaaatgttaaatatcgaattttgacaatttccatcagtttagtccttgtacacgtggctg 3456898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 56 - 120
Target Start/End: Original strand, 17951964 - 17952028
Alignment:
Q  56 tttccatcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacacagca 120  Q
    |||||||||||||||||| |||||||||||||  ||| ||  |||||||||||| ||||||||||    
T  17951964 tttccatcaatttagtccctgtacacgtggctttctttttcccacgtgtacaagccaacacagca 17952028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 56 - 120
Target Start/End: Original strand, 35175785 - 35175849
Alignment:
Q  56 tttccatcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacacagca 120  Q
    |||||||||||||||||| |||||||||||||  ||| ||  |||||||||||| ||||||||||    
T  35175785 tttccatcaatttagtccctgtacacgtggctttctttttcccacgtgtacaagccaacacagca 35175849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 197 - 275
Target Start/End: Complemental strand, 21068706 - 21068628
Alignment:
Q  197 ggactaaatagatattttgcaaaattcagagacgaatttggccgattttttaaaattcagggacgaatttgaggtatta 275  Q
    ||||||||||||||||| | ||||||    |||||||||| | |||| || |||||||| |||||||||||||||||||    
T  21068706 ggactaaatagatatttcgtaaaatttgtggacgaatttgactgattgttgaaaattcaaggacgaatttgaggtatta 21068628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 159 - 241
Target Start/End: Complemental strand, 29112419 - 29112337
Alignment:
Q  159 acggagggaccattttgatggacgtctgtaaaattcagggactaaatagatattttgcaaaattcagagacgaatttggccga 241  Q
    ||||||||||| ||||||||||||||||  |||||||||||  |||| || |||| ||| |||| || ||| |||||||||||    
T  29112419 acggagggacctttttgatggacgtctgacaaattcagggatgaaattgaaatttcgcataattgagggactaatttggccga 29112337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 26 - 88
Target Start/End: Original strand, 32455803 - 32455865
Alignment:
Q  26 actgaaaagttaagtctcgaatttttaccatttccatcaatttagtccttgtacacgtggctg 88  Q
    ||||||| ||||| | ||||||||| |  |||||||||| |||||||||||||||||||||||    
T  32455803 actgaaatgttaaatatcgaattttgataatttccatcagtttagtccttgtacacgtggctg 32455865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 217 - 274
Target Start/End: Complemental strand, 7049847 - 7049790
Alignment:
Q  217 aaaattcagagacgaatttggccgattttttaaaattcagggacgaatttgaggtatt 274  Q
    ||||||||| |||||||||||| ||||||| |||||||| ||| ||||||||| ||||    
T  7049847 aaaattcagggacgaatttggctgatttttgaaaattcaaggaagaatttgagatatt 7049790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 97 - 203
Target Start/End: Complemental strand, 11163982 - 11163875
Alignment:
Q  97 acacgtgtacaagacaacacagcatgcaaga-gatacgtcatcaccactaacggaggttttggacggagggaccattttgatggacgtctgtaaaattca 195  Q
    |||||||||||||||||||   |||||| || || |  ||| |||||||||||| |  |||||||||| |||| | |||||| ||||| ||| |||||||    
T  11163982 acacgtgtacaagacaacaagccatgcaggaagacaactcagcaccactaacggtgcatttggacggaaggactaatttgattgacgtttgttaaattca 11163883  T
Q  196 gggactaa 203  Q
    ||||||||    
T  11163882 gggactaa 11163875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 141 - 268
Target Start/End: Original strand, 17952029 - 17952156
Alignment:
Q  141 cactaacggaggttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatattttgcaaaattcagagacgaatttggccg 240  Q
    ||||||||||  |||||||||||||||| |  ||||||||||||    ||||||||||||||  | ||||||| |  |||||  | ||||||||||||||    
T  17952029 cactaacggaccttttggacggagggacgaaattgatggacgtcaaacaaattcagggactattttgatatttcgttaaatttggggacgaatttggccg 17952128  T
Q  241 attttttaaaattcagggacgaatttga 268  Q
    |    | |||||||||||||||| ||||    
T  17952129 acccctgaaaattcagggacgaaattga 17952156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 153 - 268
Target Start/End: Original strand, 35175862 - 35175977
Alignment:
Q  153 ttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatattttgcaaaattcagagacgaatttggccgattttttaaaat 252  Q
    |||||||||||||||| |  ||||||||||||    ||||||||||||||  | ||||||| |  |||||  ||||||||||||||||||   | |||||    
T  35175862 ttttggacggagggacgaaattgatggacgtcaaacaaattcagggactattttgatatttcgttaaatttggagacgaatttggccgatccctgaaaat 35175961  T
Q  253 tcagggacgaatttga 268  Q
    ||| ||||||| ||||    
T  35175962 tcaaggacgaaattga 35175977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 231 - 275
Target Start/End: Complemental strand, 21091153 - 21091109
Alignment:
Q  231 aatttggccgattttttaaaattcagggacgaatttgaggtatta 275  Q
    |||||||  ||||||| |||||||| |||||||||||||||||||    
T  21091153 aatttggttgatttttgaaaattcaaggacgaatttgaggtatta 21091109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0564 (Bit Score: 181; Significance: 8e-98; HSPs: 1)
Name: scaffold0564
Description:

Target: scaffold0564; HSP #1
Raw Score: 181; E-Value: 8e-98
Query Start/End: Original strand, 14 - 276
Target Start/End: Complemental strand, 8525 - 8264
Alignment:
Q  14 aggaaaaattatactgaaaagttaagtctcgaatttttaccatttccatcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaa 113  Q
    ||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  8525 aggaaaaattacactgaaaagttaaatctcgaatttttaccatttccatcaatttagtacttgtacacgtggctgccttgttgacacgtgtacaagacaa 8426  T
Q  114 cacagcatgcaaga-gatacgtcatcaccactaacggaggttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatatt 212  Q
    |||| | ||||||| || |||||||||||||||||| || ||||||||||| | ||||||||||||||||  | ||||||||||||||||||||||||||    
T  8425 cacatcttgcaagaggacacgtcatcaccactaacgaagcttttggacggatgtaccattttgatggacg--tataaaattcagggactaaatagatatt 8328  T
Q  213 ttgcaaaattcagagacgaatttggccgattttttaaaattcagggacgaatttgaggtattag 276  Q
    ||||||||||||   |||||||||||| ||||||||||||||| ||||||||||||||||||||    
T  8327 ttgcaaaattcaagaacgaatttggccaattttttaaaattcaaggacgaatttgaggtattag 8264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058 (Bit Score: 138; Significance: 4e-72; HSPs: 3)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 138; E-Value: 4e-72
Query Start/End: Original strand, 26 - 278
Target Start/End: Complemental strand, 3547 - 3294
Alignment:
Q  26 actgaaaagttaagtctcgaatttttaccatttccatcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacacagcatgcaa 125  Q
    ||||||| ||||| | ||||||||| ||||||||||||||||||||| ||||||||||||||| |||| |||||| |||||| ||||||| |||||||||    
T  3547 actgaaatgttaaatatcgaattttgaccatttccatcaatttagtctttgtacacgtggctgacttgctgacacatgtacaggacaacaaagcatgcaa 3448  T
Q  126 ga-gatacgtcatcaccactaacggaggttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatattttgcaaaattca 224  Q
    || |  || ||||||| | |||||||  |||||||||||||||| | |||||||||||||||||||||||||||||||| | ||||||| ||||||||||    
T  3447 gaagccacatcatcactattaacggaccttttggacggagggacgaatttgatggacgtctgtaaaattcagggactaatttgatatttcgcaaaattca 3348  T
Q  225 gagacgaatttggccgattttttaaaattcagggacgaatttgaggtattagtc 278  Q
    | ||| || ||||||||||||| |||||||| ||||||||||||||||||||||    
T  3347 gggacaaaattggccgatttttcaaaattcaaggacgaatttgaggtattagtc 3294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058; HSP #2
Raw Score: 138; E-Value: 4e-72
Query Start/End: Original strand, 26 - 278
Target Start/End: Complemental strand, 4719 - 4466
Alignment:
Q  26 actgaaaagttaagtctcgaatttttaccatttccatcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacacagcatgcaa 125  Q
    ||||||| ||||| | ||||||||| ||||||||||||||||||||| ||||||||||||||| |||| |||||| |||||| ||||||| |||||||||    
T  4719 actgaaatgttaaatatcgaattttgaccatttccatcaatttagtctttgtacacgtggctgacttgctgacacatgtacaggacaacaaagcatgcaa 4620  T
Q  126 ga-gatacgtcatcaccactaacggaggttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatattttgcaaaattca 224  Q
    || |  || ||||||| | |||||||  |||||||||||||||| | |||||||||||||||||||||||||||||||| | ||||||| ||||||||||    
T  4619 gaagccacatcatcactattaacggaccttttggacggagggacgaatttgatggacgtctgtaaaattcagggactaatttgatatttcgcaaaattca 4520  T
Q  225 gagacgaatttggccgattttttaaaattcagggacgaatttgaggtattagtc 278  Q
    | ||| || ||||||||||||| |||||||| ||||||||||||||||||||||    
T  4519 gggacaaaattggccgatttttcaaaattcaaggacgaatttgaggtattagtc 4466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 189 - 278
Target Start/End: Original strand, 14343 - 14432
Alignment:
Q  189 aaattcagggactaaatagatattttgcaaaattcagagacgaatttggccgattttttaaaattcagggacgaatttgaggtattagtc 278  Q
    ||||||||||||||| | ||||||| ||||||||||| |||||| || |||||||||| |||||||| ||||||||||||||||||||||    
T  14343 aaattcagggactaatttgatatttcgcaaaattcagggacgaaatttgccgatttttcaaaattcaaggacgaatttgaggtattagtc 14432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 89; Significance: 7e-43; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 29 - 200
Target Start/End: Complemental strand, 37454 - 37282
Alignment:
Q  29 gaaaagttaagtctcgaatttttaccatttccatcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacacagcatgcaag-a 127  Q
    |||||||||| | |||||||||||| ||||||||||| ||||||||||||||||||| ||||||||||||||||||| | ||||||||| ||| |||| |    
T  37454 gaaaagttaaatttcgaatttttacaatttccatcaaattagtccttgtacacgtggttgccttgttgacacgtgtaaaggacaacacaacatacaagaa 37355  T
Q  128 gatacgtcatcaccactaacggaggttttggacggagggaccattttgatggacgtctgtaaaattcagggac 200  Q
    || |  ||||||||| |||||||| ||||||| ||||  ||||||||||| ||||||||||||||||| ||||    
T  37354 gacatatcatcaccattaacggagtttttggatggagaaaccattttgatagacgtctgtaaaattcatggac 37282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0345 (Bit Score: 63; Significance: 2e-27; HSPs: 1)
Name: scaffold0345
Description:

Target: scaffold0345; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 189 - 279
Target Start/End: Original strand, 1555 - 1645
Alignment:
Q  189 aaattcagggactaaatagatattttgcaaaattcagagacgaatttggccgattttttaaaattcagggacgaatttgaggtattagtct 279  Q
    ||||||||||||||||| | |||||| |||||||||| |||||||||| |||||||||||||||||| |||||||||||| ||||||||||    
T  1555 aaattcagggactaaattgctatttttcaaaattcagggacgaatttgaccgattttttaaaattcaaggacgaatttgatgtattagtct 1645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0129 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0129
Description:

Target: scaffold0129; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 56 - 200
Target Start/End: Complemental strand, 4682 - 4537
Alignment:
Q  56 tttccatcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacacagcatgcaaga-gatacgtcatcaccactaacggaggtt 154  Q
    |||| ||||| || |||||||||||||||||| |||||| ||||||||||||||||||||   |||||| || || |  ||| || ||||||| ||   |    
T  4682 tttcaatcaaattggtccttgtacacgtggcttccttgtagacacgtgtacaagacaacaagccatgcaggacgacaactcagcaacactaacagaacat 4583  T
Q  155 ttggacggagggaccattttgatggacgtctgtaaaattcagggac 200  Q
    ||||||||| |||| |||||||||||||| |||  |||||||||||    
T  4582 ttggacggaaggactattttgatggacgtttgttgaattcagggac 4537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0081 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0081
Description:

Target: scaffold0081; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 189 - 278
Target Start/End: Original strand, 54258 - 54347
Alignment:
Q  189 aaattcagggactaaatagatattttgcaaaattcagagacgaatttggccgattttttaaaattcagggacgaatttgaggtattagtc 278  Q
    ||||||||||||||| | ||||||| | ||||||||| |||||| ||| ||||||||| |||||||| |||| | |||||||||||||||    
T  54258 aaattcagggactaatttgatatttcgaaaaattcagggacgaaattgaccgatttttcaaaattcaaggactattttgaggtattagtc 54347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0477 (Bit Score: 42; Significance: 0.000000000000007; HSPs: 1)
Name: scaffold0477
Description:

Target: scaffold0477; HSP #1
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 61 - 241
Target Start/End: Original strand, 6540 - 6721
Alignment:
Q  61 atcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacacagcatgcaaga-gatacgtcatcaccactaacggaggttttgga 159  Q
    ||||| || |||| || |||||||||| |||| ||| |||| |||||||||| |||||||||||||  || | |||| ||   |||||||||    |  |    
T  6540 atcaaattcgtccctgaacacgtggcttccttcttgccacgcgtacaagacagcacagcatgcaaggtgacatgtcagcatggctaacggagcccgttaa 6639  T
Q  160 cggagggaccattttgatggacgtctgtaaaattcagggactaaatagatattttgcaaaattcagagacgaatttggccga 241  Q
    |||||||||| |||||||||| |||||  ||||||||||| ||||| |||||||  || |||| || |||||||||||||||    
T  6640 cggagggacctttttgatggaggtctgataaattcagggattaaattgatatttcacataattgagggacgaatttggccga 6721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1712 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold1712
Description:

Target: scaffold1712; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 189 - 278
Target Start/End: Complemental strand, 1071 - 982
Alignment:
Q  189 aaattcagggactaaatagatattttgcaaaattcagagacgaatttggccgattttttaaaattcagggacgaatttgaggtattagtc 278  Q
    ||||||||||||||  | ||||||| | | ||||||| |||||| || |||||||||| |||||||| |||| | |||||||||||||||    
T  1071 aaattcagggactattttgatatttcgaataattcagggacgaaatttgccgatttttcaaaattcaaggactattttgaggtattagtc 982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 202 - 282
Target Start/End: Complemental strand, 436341 - 436261
Alignment:
Q  202 aaatagatattttgcaaaattcagagacgaatttggccgattttttaaaattcagggacgaatttgaggtattagtctatc 282  Q
    |||||||||||| |||||||| |  || ||||||||| ||||||| |||||||| | ||||||||||||| ||| ||||||    
T  436341 aaatagatatttcgcaaaatttatggatgaatttggctgatttttgaaaattcaagaacgaatttgaggtgttactctatc 436261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0092 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0092
Description:

Target: scaffold0092; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 97 - 203
Target Start/End: Original strand, 36792 - 36899
Alignment:
Q  97 acacgtgtacaagacaacacagcatgcaaga-gatacgtcatcaccactaacggaggttttggacggagggaccattttgatggacgtctgtaaaattca 195  Q
    |||||||||||||||||||   |||||| || || |  ||| |||||||||||| |  |||||||||| |||| | |||||| ||||| ||| |||||||    
T  36792 acacgtgtacaagacaacaagccatgcaggaagacaactcagcaccactaacggtgcatttggacggaaggactaatttgattgacgtttgttaaattca 36891  T
Q  196 gggactaa 203  Q
    ||||||||    
T  36892 gggactaa 36899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0146 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0146
Description:

Target: scaffold0146; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 61 - 115
Target Start/End: Original strand, 15899 - 15953
Alignment:
Q  61 atcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaaca 115  Q
    ||||| || ||||||||||||||| || |||||||||||| |||||||| |||||    
T  15899 atcaaattggtccttgtacacgtgacttccttgttgacacctgtacaaggcaaca 15953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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