View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF15367_high_6 (Length: 365)

Name: NF15367_high_6
Description: NF15367
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF15367_high_6
NF15367_high_6
[»] chr4 (92 HSPs)
chr4 (36-327)||(40200737-40201029)
chr4 (36-156)||(29269296-29269415)
chr4 (38-155)||(9285642-9285759)
chr4 (38-155)||(21476064-21476181)
chr4 (36-156)||(20753106-20753226)
chr4 (43-155)||(50657875-50657987)
chr4 (36-139)||(10098136-10098239)
chr4 (47-157)||(47017938-47018048)
chr4 (47-156)||(31601800-31601909)
chr4 (36-156)||(17859772-17859892)
chr4 (47-155)||(43115263-43115371)
chr4 (36-139)||(3465594-3465697)
chr4 (40-151)||(34773668-34773779)
chr4 (38-155)||(8941567-8941684)
chr4 (46-155)||(24234065-24234174)
chr4 (56-149)||(35747483-35747576)
chr4 (47-151)||(26203779-26203883)
chr4 (36-155)||(31578014-31578131)
chr4 (49-156)||(6637716-6637822)
chr4 (36-139)||(54304910-54305012)
chr4 (38-155)||(5430347-5430465)
chr4 (39-156)||(31152512-31152629)
chr4 (36-156)||(9924850-9924970)
chr4 (47-139)||(16201307-16201399)
chr4 (44-152)||(32885686-32885794)
chr4 (36-156)||(44074848-44074967)
chr4 (36-84)||(51536925-51536973)
chr4 (36-139)||(3442854-3442957)
chr4 (44-159)||(12856175-12856290)
chr4 (36-135)||(13073136-13073234)
chr4 (36-155)||(15021420-15021539)
chr4 (36-155)||(33944344-33944463)
chr4 (47-137)||(12868019-12868108)
chr4 (44-153)||(36008271-36008381)
chr4 (48-130)||(37032172-37032254)
chr4 (47-137)||(44975921-44976011)
chr4 (38-139)||(51077878-51077980)
chr4 (36-154)||(52560760-52560878)
chr4 (43-149)||(55345765-55345871)
chr4 (36-81)||(2487356-2487401)
chr4 (51-156)||(38433305-38433410)
chr4 (47-156)||(40082215-40082324)
chr4 (36-97)||(20610792-20610855)
chr4 (39-150)||(44374063-44374175)
chr4 (38-129)||(31480292-31480383)
chr4 (36-135)||(35451102-35451201)
chr4 (110-161)||(50783489-50783540)
chr4 (39-149)||(52608552-52608661)
chr4 (36-139)||(53697961-53698064)
chr4 (38-135)||(23376199-23376296)
chr4 (38-156)||(39992830-39992947)
chr4 (51-137)||(43336974-43337060)
chr4 (50-139)||(1297864-1297953)
chr4 (43-156)||(9172359-9172472)
chr4 (51-136)||(22478736-22478821)
chr4 (70-155)||(23661373-23661458)
chr4 (36-81)||(27584039-27584084)
chr4 (36-137)||(35112721-35112822)
chr4 (36-129)||(41003153-41003245)
chr4 (46-107)||(52587330-52587391)
chr4 (36-155)||(548868-548987)
chr4 (36-133)||(19311811-19311909)
chr4 (37-97)||(28221289-28221349)
chr4 (37-99)||(1589138-1589201)
chr4 (44-139)||(6330925-6331020)
chr4 (43-153)||(12820393-12820504)
chr4 (44-151)||(35031382-35031489)
chr4 (39-153)||(48512195-48512310)
chr4 (36-155)||(56546430-56546549)
chr4 (110-156)||(4722519-4722565)
chr4 (38-97)||(12585540-12585601)
chr4 (106-152)||(20181209-20181255)
chr4 (39-85)||(22158312-22158358)
chr4 (47-97)||(37274633-37274683)
chr4 (36-98)||(41943959-41944021)
chr4 (110-156)||(46735024-46735070)
chr4 (110-156)||(52743222-52743268)
chr4 (56-89)||(6082872-6082905)
chr4 (66-103)||(8434804-8434841)
chr4 (40-97)||(10757760-10757817)
chr4 (40-97)||(10970931-10970988)
chr4 (110-155)||(13211407-13211452)
chr4 (36-81)||(20266932-20266977)
chr4 (36-81)||(30152183-30152228)
chr4 (36-81)||(30295582-30295627)
chr4 (36-81)||(30324484-30324529)
chr4 (36-137)||(33536238-33536339)
chr4 (108-152)||(20955496-20955540)
chr4 (110-154)||(26253948-26253992)
chr4 (36-68)||(37739188-37739220)
chr4 (105-157)||(46482867-46482919)
chr4 (110-154)||(55266490-55266534)
[»] chr2 (64 HSPs)
chr2 (44-150)||(36426845-36426951)
chr2 (36-154)||(20122456-20122574)
chr2 (36-156)||(8234773-8234893)
chr2 (36-156)||(9547108-9547228)
chr2 (36-155)||(7086248-7086367)
chr2 (36-156)||(580764-580884)
chr2 (36-156)||(2114416-2114536)
chr2 (36-155)||(16973903-16974022)
chr2 (36-155)||(22538534-22538653)
chr2 (45-156)||(30474185-30474296)
chr2 (43-155)||(1836583-1836695)
chr2 (36-156)||(3179318-3179438)
chr2 (36-156)||(39726416-39726535)
chr2 (40-155)||(17239896-17240011)
chr2 (36-139)||(32891292-32891395)
chr2 (36-149)||(16762770-16762882)
chr2 (38-135)||(18386795-18386892)
chr2 (51-151)||(9791891-9791991)
chr2 (39-139)||(16028092-16028192)
chr2 (36-156)||(17154643-17154763)
chr2 (36-155)||(31564090-31564203)
chr2 (36-139)||(31956877-31956981)
chr2 (43-153)||(11133072-11133183)
chr2 (36-155)||(15392192-15392311)
chr2 (36-156)||(18209922-18210045)
chr2 (72-139)||(27495549-27495616)
chr2 (40-131)||(32891618-32891709)
chr2 (36-129)||(9796918-9797011)
chr2 (36-81)||(29664672-29664717)
chr2 (36-154)||(17115525-17115643)
chr2 (36-139)||(30471952-30472055)
chr2 (56-155)||(30811833-30811932)
chr2 (36-139)||(45523676-45523779)
chr2 (61-135)||(19052617-19052691)
chr2 (37-151)||(22297434-22297548)
chr2 (70-156)||(36520795-36520881)
chr2 (43-156)||(14879122-14879235)
chr2 (39-155)||(10262734-10262850)
chr2 (38-154)||(32988346-32988462)
chr2 (36-156)||(33001534-33001654)
chr2 (36-152)||(38820573-38820688)
chr2 (39-139)||(42091259-42091358)
chr2 (43-139)||(44721692-44721788)
chr2 (43-137)||(3364738-3364832)
chr2 (38-153)||(34107271-34107388)
chr2 (36-97)||(3037603-3037664)
chr2 (36-81)||(14483638-14483683)
chr2 (54-139)||(18007260-18007345)
chr2 (38-151)||(34620517-34620630)
chr2 (36-152)||(44422105-44422221)
chr2 (43-80)||(44950976-44951013)
chr2 (37-77)||(41699450-41699490)
chr2 (36-135)||(19905636-19905735)
chr2 (110-157)||(36481062-36481109)
chr2 (105-152)||(41711686-41711733)
chr2 (106-156)||(2558309-2558359)
chr2 (36-118)||(11837021-11837103)
chr2 (44-154)||(20533753-20533863)
chr2 (43-80)||(2557571-2557608)
chr2 (110-155)||(15690089-15690134)
chr2 (56-97)||(18424154-18424194)
chr2 (36-81)||(34018051-34018096)
chr2 (36-97)||(1244622-1244685)
chr2 (37-69)||(37246446-37246478)
[»] chr1 (67 HSPs)
chr1 (39-152)||(4429466-4429579)
chr1 (36-155)||(49916435-49916554)
chr1 (44-156)||(15774301-15774413)
chr1 (36-154)||(48110525-48110643)
chr1 (38-155)||(21884570-21884687)
chr1 (36-155)||(3532955-3533073)
chr1 (36-139)||(15368816-15368919)
chr1 (61-139)||(17889072-17889150)
chr1 (47-157)||(18923877-18923987)
chr1 (36-158)||(23930525-23930647)
chr1 (43-156)||(42831941-42832054)
chr1 (36-156)||(4354086-4354206)
chr1 (36-156)||(37490884-37491004)
chr1 (36-156)||(43555855-43555975)
chr1 (36-156)||(46116155-46116275)
chr1 (36-139)||(19793537-19793640)
chr1 (36-155)||(24661977-24662096)
chr1 (46-157)||(30649086-30649197)
chr1 (43-158)||(39434610-39434725)
chr1 (72-155)||(49010717-49010800)
chr1 (36-153)||(9527422-9527540)
chr1 (36-156)||(538310-538430)
chr1 (36-156)||(27745151-27745271)
chr1 (36-156)||(34560319-34560438)
chr1 (43-159)||(49251383-49251499)
chr1 (56-135)||(35840110-35840189)
chr1 (36-139)||(37733766-37733869)
chr1 (43-158)||(39433350-39433465)
chr1 (49-135)||(8865171-8865257)
chr1 (39-157)||(29331148-29331266)
chr1 (38-139)||(11802003-11802104)
chr1 (39-155)||(49606681-49606798)
chr1 (48-152)||(749580-749683)
chr1 (36-139)||(8364389-8364492)
chr1 (39-155)||(12073061-12073177)
chr1 (43-155)||(20357455-20357566)
chr1 (43-155)||(20562389-20562500)
chr1 (36-152)||(22346418-22346533)
chr1 (39-139)||(23345041-23345139)
chr1 (48-156)||(23463979-23464087)
chr1 (105-153)||(29442017-29442065)
chr1 (36-155)||(38019928-38020048)
chr1 (36-99)||(5485487-5485550)
chr1 (36-139)||(16110001-16110104)
chr1 (36-139)||(17064248-17064351)
chr1 (36-139)||(24636735-24636838)
chr1 (36-122)||(4616901-4616987)
chr1 (39-81)||(32711128-32711170)
chr1 (36-98)||(35593815-35593877)
chr1 (43-85)||(39994836-39994878)
chr1 (44-134)||(44803243-44803333)
chr1 (44-97)||(11405509-11405562)
chr1 (36-89)||(30632365-30632418)
chr1 (36-97)||(47939180-47939241)
chr1 (49-97)||(1031640-1031688)
chr1 (36-139)||(17871062-17871163)
chr1 (49-97)||(35176249-35176297)
chr1 (39-155)||(40814750-40814866)
chr1 (114-157)||(9408673-9408716)
chr1 (110-156)||(5172657-5172703)
chr1 (39-81)||(9590329-9590371)
chr1 (44-78)||(12866196-12866230)
chr1 (44-137)||(36164675-36164769)
chr1 (106-152)||(38851633-38851679)
chr1 (36-139)||(11213430-11213533)
chr1 (36-80)||(11907280-11907324)
chr1 (36-97)||(41677113-41677176)
[»] chr8 (68 HSPs)
chr8 (43-155)||(43468693-43468805)
chr8 (36-156)||(34073220-34073340)
chr8 (46-156)||(42688050-42688160)
chr8 (36-156)||(7649523-7649642)
chr8 (44-139)||(8740645-8740740)
chr8 (36-139)||(24074517-24074620)
chr8 (36-134)||(10184782-10184880)
chr8 (39-156)||(31373314-31373431)
chr8 (36-156)||(4798522-4798642)
chr8 (44-155)||(15042354-15042465)
chr8 (36-155)||(25119203-25119322)
chr8 (44-155)||(39484359-39484470)
chr8 (44-157)||(5184876-5184989)
chr8 (43-155)||(10970261-10970373)
chr8 (43-155)||(30461531-30461643)
chr8 (36-156)||(40249859-40249981)
chr8 (36-139)||(25139868-25139971)
chr8 (39-139)||(44360921-44361018)
chr8 (36-97)||(14683929-14683990)
chr8 (36-156)||(23857304-23857425)
chr8 (36-156)||(28378806-28378927)
chr8 (38-139)||(43874960-43875061)
chr8 (48-156)||(9524951-9525059)
chr8 (56-156)||(9737361-9737461)
chr8 (36-156)||(25689369-25689489)
chr8 (48-155)||(24608476-24608583)
chr8 (36-155)||(27558852-27558970)
chr8 (39-156)||(6064371-6064488)
chr8 (36-157)||(8682374-8682495)
chr8 (36-97)||(14684197-14684258)
chr8 (106-155)||(29108657-29108706)
chr8 (36-81)||(36359699-36359744)
chr8 (44-156)||(14010761-14010873)
chr8 (47-139)||(37219516-37219608)
chr8 (62-157)||(40329212-40329307)
chr8 (36-120)||(41125415-41125498)
chr8 (108-156)||(41225718-41225766)
chr8 (36-152)||(44070349-44070465)
chr8 (44-139)||(10199731-10199826)
chr8 (36-139)||(27822081-27822184)
chr8 (58-131)||(8034549-8034622)
chr8 (36-157)||(27868699-27868820)
chr8 (110-155)||(28465613-28465658)
chr8 (36-97)||(30542817-30542878)
chr8 (36-81)||(39258649-39258694)
chr8 (70-139)||(43763294-43763362)
chr8 (39-139)||(6978831-6978931)
chr8 (38-81)||(7603806-7603849)
chr8 (36-153)||(10292348-10292466)
chr8 (38-81)||(13537294-13537337)
chr8 (38-81)||(13626842-13626885)
chr8 (39-129)||(22838027-22838118)
chr8 (56-139)||(23766408-23766491)
chr8 (56-99)||(31821032-31821075)
chr8 (38-81)||(33570412-33570455)
chr8 (73-156)||(43847696-43847779)
chr8 (110-156)||(13762567-13762613)
chr8 (36-153)||(14012608-14012726)
chr8 (110-156)||(17980276-17980322)
chr8 (37-131)||(30942582-30942675)
chr8 (36-98)||(37154566-37154628)
chr8 (110-155)||(2376513-2376558)
chr8 (111-156)||(25689503-25689548)
chr8 (106-155)||(35556437-35556486)
chr8 (36-136)||(42762013-42762111)
chr8 (36-81)||(44923278-44923323)
chr8 (38-97)||(8349464-8349525)
chr8 (56-152)||(44136278-44136374)
[»] chr5 (55 HSPs)
chr5 (43-155)||(2029116-2029228)
chr5 (38-139)||(14487572-14487673)
chr5 (36-156)||(32158395-32158515)
chr5 (36-154)||(18872517-18872633)
chr5 (36-158)||(19058985-19059107)
chr5 (38-156)||(29629928-29630046)
chr5 (36-149)||(27440279-27440392)
chr5 (36-156)||(20945872-20945992)
chr5 (36-139)||(6671767-6671870)
chr5 (38-137)||(15978660-15978759)
chr5 (36-157)||(843349-843470)
chr5 (36-137)||(6014792-6014893)
chr5 (36-150)||(29096289-29096403)
chr5 (36-151)||(29841347-29841462)
chr5 (38-139)||(23925554-23925655)
chr5 (36-97)||(29331296-29331357)
chr5 (36-155)||(21017584-21017706)
chr5 (37-139)||(6561909-6562011)
chr5 (36-151)||(18478002-18478117)
chr5 (36-139)||(20762292-20762395)
chr5 (36-155)||(33800888-33801007)
chr5 (36-139)||(42455375-42455478)
chr5 (43-156)||(1244715-1244828)
chr5 (36-97)||(21212947-21213008)
chr5 (38-155)||(27219546-27219663)
chr5 (36-136)||(39760088-39760191)
chr5 (39-136)||(42450092-42450189)
chr5 (36-155)||(29106019-29106138)
chr5 (36-139)||(29144153-29144256)
chr5 (38-155)||(33729772-33729890)
chr5 (36-155)||(36888074-36888193)
chr5 (49-139)||(2411288-2411378)
chr5 (36-153)||(3102108-3102226)
chr5 (36-78)||(5156969-5157011)
chr5 (36-153)||(6806621-6806739)
chr5 (110-156)||(10508574-10508620)
chr5 (56-138)||(23648341-23648422)
chr5 (56-138)||(23810150-23810231)
chr5 (42-155)||(8015830-8015943)
chr5 (36-81)||(9577362-9577407)
chr5 (51-160)||(13753996-13754105)
chr5 (62-155)||(22599943-22600035)
chr5 (36-85)||(34921095-34921144)
chr5 (36-97)||(38618662-38618723)
chr5 (43-156)||(40339088-40339200)
chr5 (39-86)||(22863831-22863878)
chr5 (56-155)||(42801442-42801541)
chr5 (43-86)||(43166733-43166776)
chr5 (63-125)||(28378073-28378135)
chr5 (37-153)||(9963412-9963529)
chr5 (110-155)||(29050795-29050840)
chr5 (65-150)||(33599909-33599994)
chr5 (36-97)||(36226116-36226177)
chr5 (36-88)||(555156-555208)
chr5 (110-154)||(7645157-7645201)
[»] chr3 (60 HSPs)
chr3 (36-156)||(33206751-33206871)
chr3 (36-154)||(13539945-13540063)
chr3 (43-155)||(49639023-49639135)
chr3 (51-155)||(16277947-16278051)
chr3 (36-156)||(35483263-35483383)
chr3 (36-156)||(42270994-42271114)
chr3 (36-156)||(43566777-43566897)
chr3 (44-155)||(20623766-20623877)
chr3 (39-133)||(31698550-31698644)
chr3 (36-97)||(8175813-8175874)
chr3 (43-136)||(13616062-13616155)
chr3 (44-152)||(48173284-48173392)
chr3 (38-139)||(49146095-49146196)
chr3 (36-157)||(50724361-50724481)
chr3 (36-157)||(50788367-50788487)
chr3 (44-156)||(32508783-32508895)
chr3 (36-156)||(45713474-45713594)
chr3 (44-155)||(14417863-14417974)
chr3 (36-153)||(47191369-47191487)
chr3 (36-152)||(335011-335127)
chr3 (39-139)||(55195845-55195945)
chr3 (36-155)||(13874815-13874933)
chr3 (44-139)||(36727452-36727546)
chr3 (36-156)||(54983686-54983810)
chr3 (43-132)||(48558704-48558793)
chr3 (46-139)||(23820640-23820733)
chr3 (70-139)||(29507228-29507297)
chr3 (36-97)||(46328905-46328966)
chr3 (39-155)||(16006490-16006606)
chr3 (56-139)||(4072734-4072817)
chr3 (36-139)||(28206518-28206621)
chr3 (108-155)||(50720417-50720464)
chr3 (108-155)||(50792384-50792431)
chr3 (38-139)||(49019194-49019295)
chr3 (39-156)||(53472618-53472736)
chr3 (43-132)||(15498224-15498313)
chr3 (36-85)||(24751505-24751554)
chr3 (36-81)||(34344759-34344804)
chr3 (36-97)||(35477784-35477845)
chr3 (36-129)||(36331707-36331800)
chr3 (44-149)||(38682247-38682352)
chr3 (44-156)||(34136757-34136867)
chr3 (36-140)||(37059457-37059561)
chr3 (56-156)||(19540335-19540439)
chr3 (105-156)||(34503209-34503260)
chr3 (36-79)||(42909184-42909227)
chr3 (43-153)||(43774181-43774292)
chr3 (39-97)||(14271911-14271969)
chr3 (110-156)||(24751315-24751361)
chr3 (39-97)||(50144590-50144648)
chr3 (36-154)||(53870830-53870948)
chr3 (110-155)||(17440020-17440065)
chr3 (48-97)||(24537880-24537929)
chr3 (36-97)||(27066663-27066724)
chr3 (37-78)||(36256661-36256702)
chr3 (36-97)||(37279680-37279741)
chr3 (110-151)||(40786279-40786320)
chr3 (36-97)||(42832043-42832104)
chr3 (49-101)||(8493278-8493330)
chr3 (59-135)||(9167275-9167351)
[»] chr7 (60 HSPs)
chr7 (37-158)||(42887146-42887267)
chr7 (36-155)||(22706009-22706128)
chr7 (36-155)||(45198079-45198198)
chr7 (44-155)||(29710090-29710200)
chr7 (36-155)||(34948101-34948220)
chr7 (36-155)||(38025336-38025455)
chr7 (47-156)||(7262990-7263099)
chr7 (38-155)||(22965941-22966058)
chr7 (36-156)||(38778660-38778780)
chr7 (44-139)||(30152752-30152847)
chr7 (38-155)||(22741198-22741317)
chr7 (37-156)||(30644163-30644282)
chr7 (45-139)||(35368407-35368501)
chr7 (36-97)||(33202535-33202596)
chr7 (36-89)||(35890871-35890924)
chr7 (36-156)||(2366351-2366471)
chr7 (41-149)||(46716334-46716442)
chr7 (36-139)||(21086115-21086218)
chr7 (36-155)||(29778976-29779095)
chr7 (36-139)||(46918937-46919040)
chr7 (36-151)||(47552212-47552327)
chr7 (36-153)||(21285334-21285452)
chr7 (70-155)||(34961987-34962072)
chr7 (38-154)||(5787457-5787573)
chr7 (36-139)||(14967614-14967718)
chr7 (36-139)||(15397090-15397194)
chr7 (44-120)||(43902525-43902601)
chr7 (36-155)||(46337848-46337968)
chr7 (38-97)||(29658255-29658314)
chr7 (56-155)||(31694066-31694164)
chr7 (110-156)||(49012392-49012438)
chr7 (110-155)||(4818015-4818060)
chr7 (45-138)||(7908722-7908814)
chr7 (111-156)||(8195909-8195954)
chr7 (36-81)||(8214179-8214224)
chr7 (36-154)||(23470480-23470599)
chr7 (36-81)||(27907877-27907922)
chr7 (40-97)||(33555122-33555179)
chr7 (36-81)||(38451932-38451977)
chr7 (39-120)||(44843722-44843802)
chr7 (36-159)||(4590592-4590710)
chr7 (43-155)||(21925470-21925582)
chr7 (51-155)||(25086946-25087050)
chr7 (39-79)||(39969027-39969067)
chr7 (112-155)||(13905483-13905526)
chr7 (44-150)||(22047520-22047626)
chr7 (36-98)||(3595339-3595401)
chr7 (39-129)||(22926263-22926352)
chr7 (39-81)||(30604404-30604446)
chr7 (110-156)||(36316029-36316075)
chr7 (110-156)||(45417467-45417513)
chr7 (70-155)||(1513482-1513567)
chr7 (36-97)||(4042249-4042310)
chr7 (36-93)||(11680728-11680785)
chr7 (106-139)||(31279357-31279390)
chr7 (106-139)||(36176882-36176915)
chr7 (36-129)||(42286345-42286438)
chr7 (110-155)||(44437880-44437925)
chr7 (36-76)||(22043099-22043139)
chr7 (44-80)||(47403577-47403613)
[»] chr6 (49 HSPs)
chr6 (36-151)||(12127890-12128005)
chr6 (45-151)||(15288945-15289051)
chr6 (36-154)||(35190759-35190877)
chr6 (36-156)||(22389731-22389851)
chr6 (36-155)||(30566053-30566172)
chr6 (43-156)||(12089091-12089204)
chr6 (36-156)||(22501012-22501133)
chr6 (38-155)||(32057029-32057146)
chr6 (36-156)||(10377105-10377225)
chr6 (39-139)||(20716376-20716476)
chr6 (36-139)||(18904664-18904767)
chr6 (36-139)||(19165362-19165464)
chr6 (43-157)||(9491723-9491837)
chr6 (38-139)||(9438313-9438414)
chr6 (43-155)||(19417817-19417929)
chr6 (44-156)||(34365729-34365841)
chr6 (48-139)||(6025380-6025470)
chr6 (36-155)||(7563557-7563676)
chr6 (44-155)||(18631467-18631578)
chr6 (44-131)||(22983599-22983686)
chr6 (44-131)||(23804722-23804809)
chr6 (51-149)||(31741459-31741557)
chr6 (36-155)||(34396078-34396197)
chr6 (45-155)||(21507192-21507301)
chr6 (36-97)||(3448405-3448466)
chr6 (36-97)||(16251504-16251565)
chr6 (59-156)||(16269721-16269818)
chr6 (36-97)||(25020509-25020570)
chr6 (44-152)||(5288334-5288442)
chr6 (36-135)||(753293-753392)
chr6 (38-81)||(6530187-6530230)
chr6 (36-155)||(8233081-8233200)
chr6 (36-135)||(23771048-23771147)
chr6 (36-81)||(5134415-5134460)
chr6 (36-81)||(5678198-5678243)
chr6 (43-132)||(6270597-6270686)
chr6 (36-137)||(6652223-6652323)
chr6 (38-139)||(7709896-7709996)
chr6 (110-155)||(19642602-19642647)
chr6 (40-155)||(16801784-16801899)
chr6 (110-156)||(7303786-7303832)
chr6 (47-89)||(7303878-7303920)
chr6 (106-156)||(18991478-18991528)
chr6 (70-139)||(29284128-29284198)
chr6 (36-97)||(7720484-7720545)
chr6 (110-155)||(17419752-17419797)
chr6 (42-151)||(22850810-22850919)
chr6 (38-86)||(18991425-18991472)
chr6 (111-155)||(34521988-34522032)
[»] scaffold0039 (1 HSPs)
scaffold0039 (38-155)||(101826-101943)
[»] scaffold1086 (1 HSPs)
scaffold1086 (36-155)||(2483-2602)
[»] scaffold0008 (1 HSPs)
scaffold0008 (44-150)||(43686-43791)
[»] scaffold0009 (2 HSPs)
scaffold0009 (36-155)||(185493-185612)
scaffold0009 (36-97)||(26812-26873)
[»] scaffold0343 (1 HSPs)
scaffold0343 (44-137)||(8573-8666)
[»] scaffold0044 (1 HSPs)
scaffold0044 (36-97)||(49873-49934)
[»] scaffold1990 (1 HSPs)
scaffold1990 (42-150)||(894-1002)
[»] scaffold0533 (1 HSPs)
scaffold0533 (43-139)||(9337-9433)
[»] scaffold0092 (1 HSPs)
scaffold0092 (42-150)||(47304-47412)
[»] scaffold0178 (1 HSPs)
scaffold0178 (36-151)||(4322-4437)
[»] scaffold0002 (1 HSPs)
scaffold0002 (44-130)||(451364-451450)
[»] scaffold0020 (1 HSPs)
scaffold0020 (39-97)||(166649-166707)
[»] scaffold0687 (1 HSPs)
scaffold0687 (38-81)||(1490-1533)
[»] scaffold0059 (1 HSPs)
scaffold0059 (37-151)||(28602-28716)
[»] scaffold0229 (1 HSPs)
scaffold0229 (49-97)||(22477-22524)


Alignment Details
Target: chr4 (Bit Score: 173; Significance: 6e-93; HSPs: 92)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 173; E-Value: 6e-93
Query Start/End: Original strand, 36 - 327
Target Start/End: Original strand, 40200737 - 40201029
Alignment:
Q  36 aggtagtctagtggctagatttcaccttataagatgaataagtgggatgttcggagttcgaatctcaaatcctacatataataatacattgtcctaccaa 135  Q
    ||||| |||||||| ||||||| |||||||||||||||||||||| |||||||||||||||| | |  ||| | ||||||||||| ||||||||||||||    
T  40200737 aggtaatctagtggttagattttaccttataagatgaataagtggaatgttcggagttcgaaccccggatcatgcatataataatgcattgtcctaccaa 40200836  T
Q  136 ctgatcaatgctcacgggacacattggaggtgtgttatatatagagtaaatgtgaaattataattacttaatcaaaaagatttaataaagatt-nnnnnn 234  Q
    |||| ||||| |||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||           
T  40200837 ctgagcaatgttcacgggacacattggaggcttgttatatatagagtaaatgtgaaattataattacttaat-aaaaagatttaataaagattaaaaaaa 40200935  T
Q  235 ncatataaaccgt-aacatttaataaactatgatttatattttaacaaaatagtcattttttcgttctttaaagtgtgtaacgaatagtacaat 327  Q
     |||||||| ||| ||||||||||||| |||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  40200936 acatataaatcgtaaacatttaataaagtatgatttttattttaataaaatagtcattttttcgttctttaaagtgtgtaacgaatagtacaat 40201029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 36 - 156
Target Start/End: Original strand, 29269296 - 29269415
Alignment:
Q  36 aggtagtctagtggctagatttcaccttataagatgaataagtgggatgttcggagttcgaatctcaaatcctacatataataatacattgtcctaccaa 135  Q
    |||||| |||||||||| | |||||| ||||||||||||||||||| ||| ||| ||||||||| ||   ||||||||||||||| |||||||| |||||    
T  29269296 aggtagcctagtggctaaaattcaccatataagatgaataagtggggtgtccggggttcgaatcccagcccctacatataataatgcattgtcc-accaa 29269394  T
Q  136 ctgatcaatgctcacgggaca 156  Q
    |||| | ||||||||||||||    
T  29269395 ctgagctatgctcacgggaca 29269415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 38 - 155
Target Start/End: Original strand, 9285642 - 9285759
Alignment:
Q  38 gtagtctagtggctagatttcaccttataagatgaataagtgggatgttcggagttcgaatctcaaatcctacatataataatacattgtcctaccaact 137  Q
    ||||||||||||||||| ||||||||||||| | |||||||||| |||  || ||||||| | || | ||| ||||||||||| |||||||||||||| |    
T  9285642 gtagtctagtggctagaattcaccttataaggttaataagtggggtgtctggggttcgaaccccagaccctgcatataataatgcattgtcctaccaatt 9285741  T
Q  138 gatcaatgctcacgggac 155  Q
    || | |||||||||||||    
T  9285742 gagctatgctcacgggac 9285759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 38 - 155
Target Start/End: Original strand, 21476064 - 21476181
Alignment:
Q  38 gtagtctagtggctagatttcaccttataagatgaataagtgggatgttcggagttcgaatctcaaatcctacatataataatacattgtcctaccaact 137  Q
    |||| |||||||||||| ||||| |||||||||||||||||||||||| |||||||||||  || |  ||| ||||||||||| || | ||||| |||||    
T  21476064 gtagcctagtggctagaattcactttataagatgaataagtgggatgtccggagttcgaacatcgacccctgcatataataatgcaatatcctatcaact 21476163  T
Q  138 gatcaatgctcacgggac 155  Q
    || | |||||||||||||    
T  21476164 gagctatgctcacgggac 21476181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 36 - 156
Target Start/End: Original strand, 20753106 - 20753226
Alignment:
Q  36 aggtagtctagtggctagatttcaccttataagatgaataagtgggatgttcggagttcgaatctcaaatcctacatataataatacattgtcctaccaa 135  Q
    |||||| |||||||||||| ||||||||||||| |||||||||| | ||| ||| ||||||| | |    ||||||||||||||| |||| |||||||||    
T  20753106 aggtagcctagtggctagaattcaccttataaggtgaataagtgtggtgtccggggttcgaaccccggcccctacatataataatgcattttcctaccaa 20753205  T
Q  136 ctgatcaatgctcacgggaca 156  Q
    |||| | ||||||||||||||    
T  20753206 ctgagctatgctcacgggaca 20753226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 43 - 155
Target Start/End: Complemental strand, 50657987 - 50657875
Alignment:
Q  43 ctagtggctagatttcaccttataagatgaataagtgggatgttcggagttcgaatctcaaatcctacatataataatacattgtcctaccaactgatca 142  Q
    |||||| ||| | |||| |||||||||||||||||||||||||| |||||||||| |   |  ||| ||||||||||| |||||||||||||||||| |     
T  50657987 ctagtgactaaaattcatcttataagatgaataagtgggatgtttggagttcgaaccatgacccctgcatataataatgcattgtcctaccaactgagct 50657888  T
Q  143 atgctcacgggac 155  Q
    |||||||||||||    
T  50657887 atgctcacgggac 50657875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 36 - 139
Target Start/End: Complemental strand, 10098239 - 10098136
Alignment:
Q  36 aggtagtctagtggctagatttcaccttataagatgaataagtgggatgttcggagttcgaatctcaaatcctacatataataatacattgtcctaccaa 135  Q
    ||||||||||||||||||| |||| ||||||||||||||||||||| ||| ||| ||||||||| |    ||| ||||||||||| |||||||||||||     
T  10098239 aggtagtctagtggctagaattcatcttataagatgaataagtggggtgtccggggttcgaatcccggcccctgcatataataatgcattgtcctaccag 10098140  T
Q  136 ctga 139  Q
    ||||    
T  10098139 ctga 10098136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 47 - 157
Target Start/End: Original strand, 47017938 - 47018048
Alignment:
Q  47 tggctagatttcaccttataagatgaataagtgggatgttcggagttcgaatctcaaatcctacatataataatacattgtcctaccaactgatcaatgc 146  Q
    |||||||| ||||||||||||| |||||||||||| ||| ||| ||||||| | |    ||| ||||||||||| |||||||||||||||||| | ||||    
T  47017938 tggctagaattcaccttataaggtgaataagtggggtgtccggggttcgaaccccggcccctgcatataataatgcattgtcctaccaactgagctatgc 47018037  T
Q  147 tcacgggacac 157  Q
    |||||||||||    
T  47018038 tcacgggacac 47018048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 47 - 156
Target Start/End: Complemental strand, 31601909 - 31601800
Alignment:
Q  47 tggctagatttcaccttataagatgaataagtgggatgttcggagttcgaatctcaaatcctacatataataatacattgtcctaccaactgatcaatgc 146  Q
    |||||||| |||| |||||||| |||||||||||| ||| ||| |||||||||||    ||| |||||||||||||||||| ||||||||||| | || |    
T  31601909 tggctagaattcatcttataaggtgaataagtggggtgtccggggttcgaatctcggcccctgcatataataatacattgttctaccaactgagctatac 31601810  T
Q  147 tcacgggaca 156  Q
    ||||||||||    
T  31601809 tcacgggaca 31601800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 36 - 156
Target Start/End: Complemental strand, 17859892 - 17859772
Alignment:
Q  36 aggtagtctagtggctagatttcaccttataagatgaataagtgggatgttcggagttcgaatctcaaatcctacatataataatacattgtcctaccaa 135  Q
    |||||| |||||||||||| ||||||||||||| |||||||||| | ||||||| |||||||   |    ||||| ||||||||| ||||||||||||||    
T  17859892 aggtagcctagtggctagaattcaccttataaggtgaataagtgaggtgttcggggttcgaactccggcccctacgtataataatgcattgtcctaccaa 17859793  T
Q  136 ctgatcaatgctcacgggaca 156  Q
    |||| | |||||||| |||||    
T  17859792 ctgagctatgctcacaggaca 17859772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 47 - 155
Target Start/End: Complemental strand, 43115371 - 43115263
Alignment:
Q  47 tggctagatttcaccttataagatgaataagtgggatgttcggagttcgaatctcaaatcctacatataataatacattgtcctaccaactgatcaatgc 146  Q
    |||||| | ||||| ||||||| ||||||| |||| ||| ||| ||||||||||| |  ||| |||||||||||||||||||||||||||||| | | ||    
T  43115371 tggctaaaattcactttataaggtgaataaatggggtgtccggggttcgaatctcgacccctgcatataataatacattgtcctaccaactgaactaagc 43115272  T
Q  147 tcacgggac 155  Q
    |||||||||    
T  43115271 tcacgggac 43115263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 36 - 139
Target Start/End: Complemental strand, 3465697 - 3465594
Alignment:
Q  36 aggtagtctagtggctagatttcaccttataagatgaataagtgggatgttcggagttcgaatctcaaatcctacatataataatacattgtcctaccaa 135  Q
    ||||||||||||||||||| ||||||||||||| |||||||||||| ||| ||| |||||||   |    ||| ||||||||||| ||||||||||||||    
T  3465697 aggtagtctagtggctagaattcaccttataaggtgaataagtggggtgtccggggttcgaactccggcccctgcatataataatgcattgtcctaccaa 3465598  T
Q  136 ctga 139  Q
    ||||    
T  3465597 ctga 3465594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 40 - 151
Target Start/End: Original strand, 34773668 - 34773779
Alignment:
Q  40 agtctagtggctagatttcaccttataagatgaataagtgggatgttcggagttcgaatctcaaatcctacatataataatacattgtcctaccaactga 139  Q
    |||| |||||||||| ||||||||||||  |||||||||||| ||| ||| ||||||| ||||   ||| ||||||||||| |||||||||| |||||||    
T  34773668 agtccagtggctagaattcaccttataaagtgaataagtggggtgtccggggttcgaacctcagcccctgcatataataatgcattgtcctatcaactga 34773767  T
Q  140 tcaatgctcacg 151  Q
     | |||||||||    
T  34773768 actatgctcacg 34773779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 38 - 155
Target Start/End: Original strand, 8941567 - 8941684
Alignment:
Q  38 gtagtctagtggctagatttcaccttataagatgaataagtgggatgttcggagttcgaatctcaaatcctacatataataatacattgtcctaccaact 137  Q
    ||||| |||||| |||| |||||||||||||| ||||||||||  |||||||| |||||| |  || | |||||||||||||| ||||||| || |||||    
T  8941567 gtagtttagtggttagaattcaccttataagacgaataagtggagtgttcggaattcgaaccctaacttctacatataataatgcattgtcttaacaact 8941666  T
Q  138 gatcaatgctcacgggac 155  Q
    || | ||||||| |||||    
T  8941667 gagctatgctcatgggac 8941684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 46 - 155
Target Start/End: Original strand, 24234065 - 24234174
Alignment:
Q  46 gtggctagatttcaccttataagatgaataagtgggatgttcggagttcgaatctcaaatcctacatataataatacattgtcctaccaactgatcaatg 145  Q
    ||||||||| |||||||||||||||||||||||||| ||| ||| |||| || | |    ||| ||||||||||| ||||| |||||||||||| | |||    
T  24234065 gtggctagaattcaccttataagatgaataagtggggtgtccggggttcaaaccccggcccctgcatataataatgcattgacctaccaactgagctatg 24234164  T
Q  146 ctcacgggac 155  Q
    ||||||||||    
T  24234165 ctcacgggac 24234174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 56 - 149
Target Start/End: Original strand, 35747483 - 35747576
Alignment:
Q  56 ttcaccttataagatgaataagtgggatgttcggagttcgaatctcaaatcctacatataataatacattgtcctaccaactgatcaatgctca 149  Q
    ||||||||||||| |||||||||||| ||| ||||||||||| ||| |  ||| |||| ||||||||||||||||||||| ||| | |||||||    
T  35747483 ttcaccttataaggtgaataagtggggtgtccggagttcgaacctcgacccctgcataaaataatacattgtcctaccaattgagctatgctca 35747576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 47 - 151
Target Start/End: Original strand, 26203779 - 26203883
Alignment:
Q  47 tggctagatttcaccttataagatgaataagtgggatgttcggagttcgaatctcaaatcctacatataataatacattgtcctaccaactgatcaatgc 146  Q
    |||||||| ||||||||||||||||||||||||||||||  || |||| || | |||  |||  |||||||||| || ||||||||||||||| | ||||    
T  26203779 tggctagaattcaccttataagatgaataagtgggatgtcaggggttcaaaccccaacccctttatataataatgcactgtcctaccaactgagctatgc 26203878  T
Q  147 tcacg 151  Q
    |||||    
T  26203879 tcacg 26203883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 36 - 155
Target Start/End: Complemental strand, 31578131 - 31578014
Alignment:
Q  36 aggtagtctagtggctagatttcaccttataagatgaataagtgggatgttcggagttcgaatctcaaatcctacatataataatacattgtcctaccaa 135  Q
    |||||| |||||||||||| ||||||||||||  |||||||||||| ||| |||  |||||||| |||  ||  ||||||||||| ||||||||||||||    
T  31578131 aggtagcctagtggctagaattcaccttataatgtgaataagtggggtgtccgggtttcgaatcccaa--cccgcatataataatgcattgtcctaccaa 31578034  T
Q  136 ctgatcaatgctcacgggac 155  Q
    || | | ||| |||||||||    
T  31578033 ctcagctatgttcacgggac 31578014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 49 - 156
Target Start/End: Original strand, 6637716 - 6637822
Alignment:
Q  49 gctagatttcaccttataagatgaataagtgggatgttcggagttcgaatctcaaatcctacatataataatacattgtcctaccaactgatcaatgctc 148  Q
    |||||| |||||||||||||||||||||||||| ||||||| ||||||| | |||  ||| |||||||||||  ||||| |||| |||||  | ||||||    
T  6637716 gctagaattcaccttataagatgaataagtggggtgttcggggttcgaaccccaacccctgcatataataatgtattgttctacgaactg-gctatgctc 6637814  T
Q  149 acgggaca 156  Q
    ||||||||    
T  6637815 acgggaca 6637822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 36 - 139
Target Start/End: Original strand, 54304910 - 54305012
Alignment:
Q  36 aggtagtctagtggctagatttcaccttataagatgaataagtgggatgttcggagttcgaatctcaaatcctacatataataatacattgtcctaccaa 135  Q
    |||||| |||||||||||| ||||||||||||| ||||||||||||||||||||  |||||| | |    ||||||||| ||||| |||||| |||||||    
T  54304910 aggtagcctagtggctagaattcaccttataagctgaataagtgggatgttcgggattcgaa-cccggcccctacatatgataatgcattgttctaccaa 54305008  T
Q  136 ctga 139  Q
    ||||    
T  54305009 ctga 54305012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 38 - 155
Target Start/End: Original strand, 5430347 - 5430465
Alignment:
Q  38 gtagtctagtggctagatttcaccttataagatgaataa-gtgggatgttcggagttcgaatctcaaatcctacatataataatacattgtcctaccaac 136  Q
    |||| |||||||||||| |||| |||||||| ||||||| ||||| ||| ||| ||||||| |      ||| |||||||||||||||||||||||||||    
T  5430347 gtagcctagtggctagaattcatcttataaggtgaataaagtggggtgtccggggttcgaaccctggtccctgcatataataatacattgtcctaccaac 5430446  T
Q  137 tgatcaatgctcacgggac 155  Q
    ||| | |||||||||||||    
T  5430447 tgagctatgctcacgggac 5430465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 39 - 156
Target Start/End: Complemental strand, 31152629 - 31152512
Alignment:
Q  39 tagtctagtggctagatttcaccttataagatgaataagtgggatgttcggagttcgaatctcaaatcctacatataataatacattgtcctaccaactg 138  Q
    |||||||||||||||| ||||||||||||| || ||||||||  ||| | |||||| ||| || |  |||| |||||||||| |||||| |||||||||     
T  31152629 tagtctagtggctagaattcaccttataaggtggataagtggagtgtcctgagttcaaatttcgatccctatatataataatgcattgttctaccaacta 31152530  T
Q  139 atcaatgctcacgggaca 156  Q
    | | ||||| ||||||||    
T  31152529 agctatgcttacgggaca 31152512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 36 - 156
Target Start/End: Complemental strand, 9924970 - 9924850
Alignment:
Q  36 aggtagtctagtggctagatttcaccttataagatgaataagtgggatgttcggagttcgaatctcaaatcctacatataataatacattgtcctaccaa 135  Q
    |||||||||||||| || | |||||| || ||| |||||||||||  ||| ||| ||||||| | | |  ||| ||||||||||| | ||||||||||||    
T  9924970 aggtagtctagtggataaaattcaccatacaaggtgaataagtggagtgtccggggttcgaaccccgacccctgcatataataatgcgttgtcctaccaa 9924871  T
Q  136 ctgatcaatgctcacgggaca 156  Q
    |||| | ||||||||||||||    
T  9924870 ctgaactatgctcacgggaca 9924850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 47 - 139
Target Start/End: Complemental strand, 16201399 - 16201307
Alignment:
Q  47 tggctagatttcaccttataagatgaataagtgggatgttcggagttcgaatctcaaatcctacatataataatacattgtcctaccaactga 139  Q
    |||||||| |||| |||||||| ||||||| | |||||| |||||||| || | |||  ||||||| ||||||| ||||||||||||||||||    
T  16201399 tggctagaattcaacttataaggtgaataaataggatgtccggagttcaaaccccaacccctacatgtaataatgcattgtcctaccaactga 16201307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 44 - 152
Target Start/End: Complemental strand, 32885794 - 32885686
Alignment:
Q  44 tagtggctagatttcaccttataagatgaataagtgggatgttcggagttcgaatctcaaatcctacatataataatacattgtcctaccaactgatcaa 143  Q
    |||||| |||| ||||||||||||| |||||||||||| ||| ||  |||||||   | |  ||| ||||||||||| |||||||||||||||||| | |    
T  32885794 tagtggatagaattcaccttataaggtgaataagtggggtgtccgaggttcgaactccgacccctgcatataataatgcattgtcctaccaactgagcta 32885695  T
Q  144 tgctcacgg 152  Q
    |||||||||    
T  32885694 tgctcacgg 32885686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 36 - 156
Target Start/End: Complemental strand, 44074967 - 44074848
Alignment:
Q  36 aggtagtctagtggctagatttcaccttataagatgaataagtgggatgttcggagttcgaatctcaaatcctacatataataatacattgtcctaccaa 135  Q
    |||||| ||| |||||| | ||||||||||||| |||||||||||| ||| |||  ||||||  ||||  ||| ||||||||||| |||||||||||| |    
T  44074967 aggtagcctaatggctaaaattcaccttataaggtgaataagtggggtgtccgggattcgaacttcaatccctgcatataataatgcattgtcctacc-a 44074869  T
Q  136 ctgatcaatgctcacgggaca 156  Q
    |||| | |||||| |||||||    
T  44074868 ctgagctatgctcgcgggaca 44074848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 36 - 84
Target Start/End: Complemental strand, 51536973 - 51536925
Alignment:
Q  36 aggtagtctagtggctagatttcaccttataagatgaataagtgggatg 84  Q
    ||||||||||||||||||| ||||||| |||||||||||||||||||||    
T  51536973 aggtagtctagtggctagaattcacctgataagatgaataagtgggatg 51536925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 36 - 139
Target Start/End: Complemental strand, 3442957 - 3442854
Alignment:
Q  36 aggtagtctagtggctagatttcaccttataagatgaataagtgggatgttcggagttcgaatctcaaatcctacatataataatacattgtcctaccaa 135  Q
    |||||||||| ||| |||| ||||||||||||| |||||||||||| |||  || ||||||| | |    || |||||||||||| ||||||||||||||    
T  3442957 aggtagtctactggttagaattcaccttataaggtgaataagtggggtgtctggggttcgaaccccggccccgacatataataatgcattgtcctaccaa 3442858  T
Q  136 ctga 139  Q
    ||||    
T  3442857 ctga 3442854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 44 - 159
Target Start/End: Complemental strand, 12856290 - 12856175
Alignment:
Q  44 tagtggctagatttcaccttataagatgaataagtgggatgttcggagttcgaatctcaaatcctacatataataatacattgtcctaccaactgatcaa 143  Q
    |||||| |||| ||||||||||||| |||||||||||| ||| ||| |||||||   | |  ||| ||||||||| | |||| ||||||||||||| | |    
T  12856290 tagtggttagaattcaccttataaggtgaataagtggggtgtccggggttcgaactccgaccccttcatataatagtgcattatcctaccaactgagcta 12856191  T
Q  144 tgctcacgggacacat 159  Q
    ||||||||| ||||||    
T  12856190 tgctcacggaacacat 12856175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 36 - 135
Target Start/End: Original strand, 13073136 - 13073234
Alignment:
Q  36 aggtagtctagtggctagatttcaccttataagatgaataagtgggatgttcggagttcgaatctcaaatcctacatataataatacattgtcctaccaa 135  Q
    |||||| ||||| |||||| ||||||||||||| | |||||||||||||| ||| ||||||| | | |  ||||||||||||||| ||||||| ||||||    
T  13073136 aggtagcctagtagctagaattcaccttataaggttaataagtgggatgtccgg-gttcgaaccccgatccctacatataataatgcattgtcataccaa 13073234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 36 - 155
Target Start/End: Complemental strand, 15021539 - 15021420
Alignment:
Q  36 aggtagtctagtggctagatttcaccttataagatgaataagtgggatgttcggagttcgaatctcaaatcctacatataataatacattgtcctaccaa 135  Q
    |||||| |||||||||| | ||||||||||||| |||||||||||| ||||||| |||||||   |   ||||||||| |||||| ||||| | |||||     
T  15021539 aggtagcctagtggctataattcaccttataaggtgaataagtgggctgttcggggttcgaactccggctcctacatacaataattcattgccataccag 15021440  T
Q  136 ctgatcaatgctcacgggac 155  Q
    |||| | |||||||| ||||    
T  15021439 ctgagctatgctcacaggac 15021420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 36 - 155
Target Start/End: Original strand, 33944344 - 33944463
Alignment:
Q  36 aggtagtctagtggctagatttcaccttataagatgaataagtgggatgttcggagttcgaatctcaaatcctacatataataatacattgtcctaccaa 135  Q
    |||||| |||||||||||| |||||||||||| ||||||||||||  | ||||  ||||||| | |    ||| ||||||||||| |||| |||||||||    
T  33944344 aggtagcctagtggctagaattcaccttataaaatgaataagtggagtattcgaggttcgaaccccggcccctgcatataataatgcattatcctaccaa 33944443  T
Q  136 ctgatcaatgctcacgggac 155  Q
    ||||   |||||||||||||    
T  33944444 ctgagttatgctcacgggac 33944463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 47 - 137
Target Start/End: Original strand, 12868019 - 12868108
Alignment:
Q  47 tggctagatttcaccttataagatgaataagtgggatgttcggagttcgaatctcaaatcctacatataataatacattgtcctaccaact 137  Q
    |||||||| |||| |||||||| ||||||||||||||||||||  |||||| ||| |   || ||||||||||| ||||||||||||||||    
T  12868019 tggctagagttcatcttataaggtgaataagtgggatgttcgggattcgaacctc-agcactgcatataataatgcattgtcctaccaact 12868108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 44 - 153
Target Start/End: Complemental strand, 36008381 - 36008271
Alignment:
Q  44 tagtggctagatttcaccttataagatgaataagtgggatgttcggagttcgaatctcaaatcctacatataataatacattgt-cctaccaactgatca 142  Q
    ||||||||||| ||||||||||||| |||||||||||| ||||||| ||||||| | |    ||| ||||||| ||| |||||| ||| |||||||| |     
T  36008381 tagtggctagaattcaccttataaggtgaataagtggggtgttcggggttcgaaccccggcccctgcatataacaatgcattgtccctgccaactgagct 36008282  T
Q  143 atgctcacggg 153  Q
    |||||||||||    
T  36008281 atgctcacggg 36008271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 48 - 130
Target Start/End: Original strand, 37032172 - 37032254
Alignment:
Q  48 ggctagatttcaccttataagatgaataagtgggatgttcggagttcgaatctcaaatcctacatataataatacattgtcct 130  Q
    ||||||| ||||||||||||| |||||||||||| ||| ||| ||||||||| | |  ||| ||||||||||| |||||||||    
T  37032172 ggctagaattcaccttataaggtgaataagtggggtgtccggggttcgaatcccgacccctgcatataataatgcattgtcct 37032254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 47 - 137
Target Start/End: Complemental strand, 44976011 - 44975921
Alignment:
Q  47 tggctagatttcaccttataagatgaataagtgggatgttcggagttcgaatctcaaatcctacatataataatacattgtcctaccaact 137  Q
    |||||||| |||| |||||||| |||||||||||||||| ||   |||||| | |||  ||| |||| |||||||||||||||||||||||    
T  44976011 tggctagaattcatcttataaggtgaataagtgggatgtccgagattcgaaccccaacccctgcatacaataatacattgtcctaccaact 44975921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 38 - 139
Target Start/End: Complemental strand, 51077980 - 51077878
Alignment:
Q  38 gtagtctagtggctagatttcacc-ttataagatgaataagtgggatgttcggagttcgaatctcaaatcctacatataataatacattgtcctaccaac 136  Q
    ||||||||||||||||| |||||| ||||||| |||||||||||| ||||||   ||||||   | |  ||| ||||||||||| |||||||||||||||    
T  51077980 gtagtctagtggctagaattcacccttataaggtgaataagtggggtgttcgagattcgaactccgacccctgcatataataatgcattgtcctaccaac 51077881  T
Q  137 tga 139  Q
    |||    
T  51077880 tga 51077878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 36 - 154
Target Start/End: Complemental strand, 52560878 - 52560760
Alignment:
Q  36 aggtagtctagtggctagatttcaccttataagatgaataagtgggatgttcggagttcgaatctcaaatcctacatataataatacattgtcctaccaa 135  Q
    ||||||||||||||||||| ||||||||||||| ||||||||||   |||  |  ||||||| | |    ||| ||||||||||| ||||||||||||||    
T  52560878 aggtagtctagtggctagaattcaccttataaggtgaataagtgaagtgtatgtggttcgaaccccggcccctgcatataataatgcattgtcctaccaa 52560779  T
Q  136 ctgatcaatgctcacggga 154  Q
     ||| | ||||||||||||    
T  52560778 ttgagctatgctcacggga 52560760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 43 - 149
Target Start/End: Complemental strand, 55345871 - 55345765
Alignment:
Q  43 ctagtggctagatttcaccttataagatgaataagtgggatgttcggagttcgaatctcaaatcctacatataataatacattgtcctaccaactgatca 142  Q
    |||||||||||| || | ||||||| ||   ||||||||||||||||| |||||| |||||  |||  |||||||||  |||||||||||||||||| |     
T  55345871 ctagtggctagaatttatcttataaaatttgtaagtgggatgttcggaattcgaacctcaacccctgtatataataacgcattgtcctaccaactgagct 55345772  T
Q  143 atgctca 149  Q
    |||||||    
T  55345771 atgctca 55345765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 36 - 81
Target Start/End: Complemental strand, 2487401 - 2487356
Alignment:
Q  36 aggtagtctagtggctagatttcaccttataagatgaataagtggg 81  Q
    |||||| |||||||||||| ||||||||||||||||||||||||||    
T  2487401 aggtagcctagtggctagaattcaccttataagatgaataagtggg 2487356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 51 - 156
Target Start/End: Complemental strand, 38433410 - 38433305
Alignment:
Q  51 tagatttcaccttataagatgaataagtgggatgttcggagttcgaatctcaaatcctacatataataatacattgtcctaccaactgatcaatgctcac 150  Q
    |||| ||||||||||||| |||||||||||| |||  || |||||||   | | |||||||||||||||| |||||||||| ||||||| | ||| ||||    
T  38433410 tagaattcaccttataaggtgaataagtggggtgtctggggttcgaactccgactcctacatataataatgcattgtcctatcaactgaactatgttcac 38433311  T
Q  151 gggaca 156  Q
     |||||    
T  38433310 aggaca 38433305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 47 - 156
Target Start/End: Original strand, 40082215 - 40082324
Alignment:
Q  47 tggctagatttcaccttataagatgaataagtgggatgttcggagttcgaatctcaaatcctacatataataatacattgtcctaccaactgatcaatgc 146  Q
    |||||||| ||||||||||||| |||||| |||  |||| | | ||||||||| |||  ||| |||||||||||||||| || ||| ||||||   ||||    
T  40082215 tggctagaattcaccttataaggtgaatatgtgaaatgtccagggttcgaatcacaacccctgcatataataatacattatcatacaaactgagttatgc 40082314  T
Q  147 tcacgggaca 156  Q
    ||||||||||    
T  40082315 tcacgggaca 40082324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 36 - 97
Target Start/End: Complemental strand, 20610855 - 20610792
Alignment:
Q  36 aggtagtctagtggctagatttcaccttat--aagatgaataagtgggatgttcggagttcgaa 97  Q
    ||||||||||||||||||| |||||||| |  ||| |||||||||||||||| |||||||||||    
T  20610855 aggtagtctagtggctagaattcaccttttttaaggtgaataagtgggatgtccggagttcgaa 20610792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 39 - 150
Target Start/End: Original strand, 44374063 - 44374175
Alignment:
Q  39 tagtctagtggctagatttcaccttataagatgaataagtgggatgttcggagttcgaatctcaaatcctacatataataataca-ttgtcctaccaact 137  Q
    |||| ||||| ||||| ||||||||||||||| |||||||||| ||| ||   |||||||   || |||| ||||||||||| || ||||||||||||||    
T  44374063 tagtttagtgactagaattcaccttataagataaataagtggggtgtccgagattcgaattctaactcctgcatataataatgcatttgtcctaccaact 44374162  T
Q  138 gatcaatgctcac 150  Q
    || | ||||||||    
T  44374163 gaactatgctcac 44374175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 38 - 129
Target Start/End: Complemental strand, 31480383 - 31480292
Alignment:
Q  38 gtagtctagtggctagatttcaccttataagatgaataagtgggatgttcggagttcgaatctcaaatcctacatataataatacattgtcc 129  Q
    |||||||||||| |||| ||||| || |||| |||||||||||| ||||||| |||||||| |||   ||| ||||||| ||| ||||||||    
T  31480383 gtagtctagtggttagaattcacgttttaaggtgaataagtggggtgttcggggttcgaatttcagcccctgcatataacaatgcattgtcc 31480292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 36 - 135
Target Start/End: Original strand, 35451102 - 35451201
Alignment:
Q  36 aggtagtctagtggctagatttcaccttataagatgaataagtgggatgttcggagttcgaatctcaaatcctacatataataatacattgtcctaccaa 135  Q
    ||||||||||||||||||| |||| |||||||| |||||||||| | ||| || ||||||||   | |  ||| ||||||||||| ||||||| ||||||    
T  35451102 aggtagtctagtggctagaattcatcttataaggtgaataagtgaggtgtccgtagttcgaactccgacccctgcatataataatgcattgtcataccaa 35451201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 110 - 161
Target Start/End: Original strand, 50783489 - 50783540
Alignment:
Q  110 catataataatacattgtcctaccaactgatcaatgctcacgggacacattg 161  Q
    ||||||||||| || ||||||||||||||| | |||||||||||||||||||    
T  50783489 catataataatgcaatgtcctaccaactgagctatgctcacgggacacattg 50783540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 39 - 149
Target Start/End: Original strand, 52608552 - 52608661
Alignment:
Q  39 tagtctagtggctagatttcaccttataagatgaataagtgggatgttcggagttcgaatctcaaatcc-tacatataataatacattgtcctaccaact 137  Q
    ||||||| |||||||| |||  ||| ||||||||||||||||| ||| ||| ||||||| |||  |||| | ||||||||||| ||||||||||||||||    
T  52608552 tagtctaatggctagaattcgtcttgtaagatgaataagtggg-tgtccggggttcgaa-ctccgatccatgcatataataatgcattgtcctaccaact 52608649  T
Q  138 gatcaatgctca 149  Q
    || | |||||||    
T  52608650 gagctatgctca 52608661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 36 - 139
Target Start/End: Original strand, 53697961 - 53698064
Alignment:
Q  36 aggtagtctagtggctagatttcaccttataagatgaataagtgggatgttcggagttcgaatctcaaatcctacatataataatacattgtcctaccaa 135  Q
    |||||| ||||| |||||| ||||||||||||| | |||||||||| ||| ||| ||||||| | |    ||| ||||||||||| |||||||||| |||    
T  53697961 aggtagcctagttgctagaattcaccttataaggtaaataagtggggtgtccggggttcgaaccccggcccctgcatataataatgcattgtcctaacaa 53698060  T
Q  136 ctga 139  Q
    ||||    
T  53698061 ctga 53698064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 38 - 135
Target Start/End: Complemental strand, 23376296 - 23376199
Alignment:
Q  38 gtagtctagtggctagatttcaccttataagatgaataagtgggatgt-tcggagttcgaatctcaaatcctacatataataatacattgtcctaccaa 135  Q
    |||| ||| |||||||| ||||| || |||| |||||||||||| ||| | || ||||||| | | | |||||||||||||||||||||||||||||||    
T  23376296 gtagcctaatggctagaattcactttgtaaggtgaataagtggggtgtctgggggttcgaaccccga-tcctacatataataatacattgtcctaccaa 23376199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 38 - 156
Target Start/End: Complemental strand, 39992947 - 39992830
Alignment:
Q  38 gtagtctagtggctagatttcaccttataagatgaataagtgggatgttcggagttcgaatctcaaatcctacatataataatacattgtcctaccaact 137  Q
    |||| |||||||||||| ||||||||||||| |||||||||||| ||| | || |||||| | ||   ||| |||||| |||| ||||||||||  ||||    
T  39992947 gtagcctagtggctagaattcaccttataaggtgaataagtggggtgtccagaattcgaa-cccagcccctgcatatattaatgcattgtcctaataact 39992849  T
Q  138 gatcaatgctcacgggaca 156  Q
    || | ||||||||| ||||    
T  39992848 gagctatgctcacgagaca 39992830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 51 - 137
Target Start/End: Complemental strand, 43337060 - 43336974
Alignment:
Q  51 tagatttcaccttataagatgaataagtgggatgttcggagttcgaatctcaaatcctacatataataatacattgtcctaccaact 137  Q
    |||| ||||| |||||||||||||||||||| |||||||  |||||| | | |  ||||||||||||||| |||| ||||| |||||    
T  43337060 tagaattcactttataagatgaataagtggggtgttcgggattcgaaccccgatccctacatataataatgcattctcctatcaact 43336974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 50 - 139
Target Start/End: Complemental strand, 1297953 - 1297864
Alignment:
Q  50 ctagatttcaccttataagatgaataagtgggatgttcggagttcgaatctcaaatcctacatataataatacattgtcctaccaactga 139  Q
    ||||| ||||||||||||| |||||||||||  ||||| | ||||||||| | |  ||| |||||||||||   ||||||||||||||||    
T  1297953 ctagaattcaccttataaggtgaataagtggagtgttcagggttcgaatcccgacccctgcatataataatgtgttgtcctaccaactga 1297864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 43 - 156
Target Start/End: Original strand, 9172359 - 9172472
Alignment:
Q  43 ctagtggctagatttcaccttataagatgaataagtgggatgttcggagttcgaatctcaaatcctacatataataatacattgtcctaccaactgatca 142  Q
    |||||| ||||| || ||||||| || |||||| || || ||||||  ||||||| | | |  ||| ||||||||||| ||||||||||||||||||       
T  9172359 ctagtgactagaatttaccttattaggtgaatacgtagggtgttcgaggttcgaaccccgacccctgcatataataatgcattgtcctaccaactgagtt 9172458  T
Q  143 atgctcacgggaca 156  Q
    ||||||||||||||    
T  9172459 atgctcacgggaca 9172472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 51 - 136
Target Start/End: Original strand, 22478736 - 22478821
Alignment:
Q  51 tagatttcaccttataagatgaataagtgggatgttcggagttcgaatctcaaatcctacatataataatacattgtcctaccaac 136  Q
    |||| ||||||||||||| ||||||| |||| ||| ||| ||||||||| |    || ||||||||||||||||||| ||||||||    
T  22478736 tagaattcaccttataaggtgaataaatggggtgtccggggttcgaatcacggccccgacatataataatacattgtactaccaac 22478821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 70 - 155
Target Start/End: Original strand, 23661373 - 23661458
Alignment:
Q  70 tgaataagtgggatgttcggagttcgaatctcaaatcctacatataataatacattgtcctaccaactgatcaatgctcacgggac 155  Q
    |||||||||||| ||||||| ||||||| | | |  ||||||||||| ||| |||||||||| ||||||| | ||| |||||||||    
T  23661373 tgaataagtggggtgttcggggttcgaacccctacccctacatataacaatgcattgtcctagcaactgagctatgttcacgggac 23661458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 36 - 81
Target Start/End: Original strand, 27584039 - 27584084
Alignment:
Q  36 aggtagtctagtggctagatttcaccttataagatgaataagtggg 81  Q
    |||||| |||||||||||| ||||||||||||| ||||||||||||    
T  27584039 aggtagcctagtggctagaattcaccttataaggtgaataagtggg 27584084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 36 - 137
Target Start/End: Complemental strand, 35112822 - 35112721
Alignment:
Q  36 aggtagtctagtggctagatttcaccttataagatgaataagtgggatgttcggagttcgaatctcaaatcctacatataataatacattgtcctaccaa 135  Q
    |||||||||| ||| |||| ||||| ||||||| | |||||| ||||||| ||  ||||||| | | |  ||||||||||||||| |||| |||||||||    
T  35112822 aggtagtctactggttagaattcactttataaggtaaataagcgggatgtccgatgttcgaaccccgacccctacatataataatgcattatcctaccaa 35112723  T
Q  136 ct 137  Q
    ||    
T  35112722 ct 35112721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 36 - 129
Target Start/End: Original strand, 41003153 - 41003245
Alignment:
Q  36 aggtagtctagtggctagatttcaccttataagatgaataagtgggatgttcggagttcgaatctcaaatcctacatataataatacattgtcc 129  Q
    |||||| ||||||| |||| |||| ||| |||| |||||||||||| ||| ||||||||||| |||||  ||| ||||||| ||| ||||||||    
T  41003153 aggtagcctagtggttagaattcatcttgtaaggtgaataagtggggtgtccggagttcgaa-ctcaacccctgcatataacaatgcattgtcc 41003245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 46 - 107
Target Start/End: Original strand, 52587330 - 52587391
Alignment:
Q  46 gtggctagatttcaccttataagatgaataagtgggatgttcggagttcgaatctcaaatcc 107  Q
    ||||||||| ||||| |||||||||||||||||| | ||| ||| ||||||| |||||||||    
T  52587330 gtggctagaattcactttataagatgaataagtgaggtgtccggggttcgaacctcaaatcc 52587391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 36 - 155
Target Start/End: Original strand, 548868 - 548987
Alignment:
Q  36 aggtagtctagtggctagatttcaccttataagatgaataagtgggatgttcggagtt-cgaatctcaaatcctacatataataatacattgtcctacca 134  Q
    |||||| ||||| |||| | ||||||||||||| |||||||||||| ||| | ||||| |||| | |    ||| ||||||||||| |||||||||||||    
T  548868 aggtagcctagtagctaaaattcaccttataaggtgaataagtggggtgt-ctgagtttcgaaccccggcccctgcatataataatgcattgtcctacca 548966  T
Q  135 actgatcaatgctcacgggac 155  Q
    ||||  | |||||||||||||    
T  548967 actgggctatgctcacgggac 548987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 36 - 133
Target Start/End: Complemental strand, 19311909 - 19311811
Alignment:
Q  36 aggtagtctagtggctagatttcaccttataagatga--ataagtgggatgttcggagttcgaatctcaaatcctacatataataatacattgtcctacc 133  Q
    |||||||||| ||| |||| ||||||||||||| |||  ||||||||| | | || |||||| ||| |||  ||||||||||||||| ||||||||||||    
T  19311909 aggtagtctattggttagaattcaccttataaggtgagaataagtggggtatccg-agttcgtatcccaacccctacatataataatgcattgtcctacc 19311811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 37 - 97
Target Start/End: Original strand, 28221289 - 28221349
Alignment:
Q  37 ggtagtctagtggctagatttcaccttataagatgaataagtgggatgttcggagttcgaa 97  Q
    ||||| ||||||| |||| ||||||||||||| |||||||||||| ||| ||| |||||||    
T  28221289 ggtagcctagtggttagaattcaccttataaggtgaataagtggggtgtccggggttcgaa 28221349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 37 - 99
Target Start/End: Original strand, 1589138 - 1589201
Alignment:
Q  37 ggtagtctagtggctagatttcaccttat-aagatgaataagtgggatgttcggagttcgaatc 99  Q
    |||||| ||||||||||| |||||||| | ||||||||||| |||||||| ||| |||||||||    
T  1589138 ggtagtttagtggctagaattcacctttttaagatgaataaatgggatgtccggggttcgaatc 1589201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 44 - 139
Target Start/End: Original strand, 6330925 - 6331020
Alignment:
Q  44 tagtggctagatttcaccttataagatgaataagtgggatgttcggagttcgaatctcaaatcctacatataataatacattgtcctaccaactga 139  Q
    ||||||||| | ||||||||||||| |||||||||||| ||| |||  || ||| | |||  |||||||||||||||  ||| | |||||||||||    
T  6330925 tagtggctaaaattcaccttataaggtgaataagtggggtgtccgggatttgaaccccaacccctacatataataatgtattattctaccaactga 6331020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 43 - 153
Target Start/End: Original strand, 12820393 - 12820504
Alignment:
Q  43 ctagtggctagatttcaccttataagatgaataagtgggatgttcggagttcgaatctcaaatcctacatataataatacattgtc-ctaccaactgatc 141  Q
    |||||||||||| ||||||||||||| |||||||||||| ||| | | |||| || | | |  ||| ||||||| ||| ||||||| || |||||||| |    
T  12820393 ctagtggctagaattcaccttataaggtgaataagtggggtgtccagggttctaaccccgacccctgcatataacaatgcattgtctctgccaactgagc 12820492  T
Q  142 aatgctcacggg 153  Q
     |||||||||||    
T  12820493 tatgctcacggg 12820504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 44 - 151
Target Start/End: Complemental strand, 35031489 - 35031382
Alignment:
Q  44 tagtggctagatttcaccttataagatgaataagtgggatgttcggagttcgaatctcaaatcctacatataataatacattgtcctaccaactgatcaa 143  Q
    ||||||||||| ||||  ||||||  | ||||| |||||| |  || ||||||| |||   |||| ||||||||||| |||||||||||||||||| | |    
T  35031489 tagtggctagaattcattttataaagtaaataaatgggatatctggggttcgaacctcggctcctgcatataataatgcattgtcctaccaactgagcta 35031390  T
Q  144 tgctcacg 151  Q
    ||||||||    
T  35031389 tgctcacg 35031382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 39 - 153
Target Start/End: Complemental strand, 48512310 - 48512195
Alignment:
Q  39 tagtctagtggctagatttcaccttataagatgaataagtgggatgttcggagttcgaatctcaaatcctacatataataatacattgt-cctaccaact 137  Q
    |||||||||||||| | ||||||||||||| |||||||||||| ||| ||| || |||| |  |   ||| ||||||| ||| |||||| ||| ||||||    
T  48512310 tagtctagtggctaaaattcaccttataaggtgaataagtggggtgtccggggtacgaaccctagcccctgcatataacaatgcattgtccctgccaact 48512211  T
Q  138 gatcaatgctcacggg 153  Q
    || | |||||||||||    
T  48512210 gagctatgctcacggg 48512195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 36 - 155
Target Start/End: Original strand, 56546430 - 56546549
Alignment:
Q  36 aggtagtctagtggctagatttcaccttataagatgaataagtgggatgttcggagttcgaatctcaaatcctacatataataatacattgtcctaccaa 135  Q
    |||||| |||||||||||| ||||| || |||  |||||||||||| |||  |  ||||||| | |    ||| ||||||||||| ||||||||||||||    
T  56546430 aggtagcctagtggctagaattcactttttaaagtgaataagtggggtgtctgtggttcgaaccccggcccctgcatataataatgcattgtcctaccaa 56546529  T
Q  136 ctgatcaatgctcacgggac 155  Q
     ||| | |||||||||||||    
T  56546530 ttgagctatgctcacgggac 56546549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 110 - 156
Target Start/End: Original strand, 4722519 - 4722565
Alignment:
Q  110 catataataatacattgtcctaccaactgatcaatgctcacgggaca 156  Q
    ||||||||||| |||||||||||||||||| | ||| ||||||||||    
T  4722519 catataataatgcattgtcctaccaactgagctatgttcacgggaca 4722565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 38 - 97
Target Start/End: Original strand, 12585540 - 12585601
Alignment:
Q  38 gtagtctagtggctagatttcaccttat--aagatgaataagtgggatgttcggagttcgaa 97  Q
    ||||||||||||||||| |||||||| |  |||||||||||||| | ||||||| |||||||    
T  12585540 gtagtctagtggctagaattcacctttttcaagatgaataagtgaggtgttcggggttcgaa 12585601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 106 - 152
Target Start/End: Complemental strand, 20181255 - 20181209
Alignment:
Q  106 cctacatataataatacattgtcctaccaactgatcaatgctcacgg 152  Q
    ||||||||||||| | |||||||||||||||||| | ||||||||||    
T  20181255 cctacatataatactgcattgtcctaccaactgagctatgctcacgg 20181209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 39 - 85
Target Start/End: Complemental strand, 22158358 - 22158312
Alignment:
Q  39 tagtctagtggctagatttcaccttataagatgaataagtgggatgt 85  Q
    |||||||||||| ||| ||||||||||||| ||||||||| ||||||    
T  22158358 tagtctagtggcaagaattcaccttataaggtgaataagttggatgt 22158312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 47 - 97
Target Start/End: Complemental strand, 37274683 - 37274633
Alignment:
Q  47 tggctagatttcaccttataagatgaataagtgggatgttcggagttcgaa 97  Q
    |||||||| || ||||||||||||||||||||||| ||| ||| |||||||    
T  37274683 tggctagaatttaccttataagatgaataagtggggtgtccggggttcgaa 37274633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 36 - 98
Target Start/End: Complemental strand, 41944021 - 41943959
Alignment:
Q  36 aggtagtctagtggctagatttcaccttataagatgaataagtgggatgttcggagttcgaat 98  Q
    |||||| |||| ||||||| ||||||||||||| ||||||||| || ||| ||| ||||||||    
T  41944021 aggtagcctagcggctagaattcaccttataaggtgaataagtagggtgtccggggttcgaat 41943959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 110 - 156
Target Start/End: Original strand, 46735024 - 46735070
Alignment:
Q  110 catataataatacattgtcctaccaactgatcaatgctcacgggaca 156  Q
    ||||||||||| || ||||||||||||||| | ||||||||||||||    
T  46735024 catataataatgcagtgtcctaccaactgagctatgctcacgggaca 46735070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 110 - 156
Target Start/End: Complemental strand, 52743268 - 52743222
Alignment:
Q  110 catataataatacattgtcctaccaactgatcaatgctcacgggaca 156  Q
    ||||||||||| ||||||||||||||| || | ||||||||||||||    
T  52743268 catataataatgcattgtcctaccaaccgagctatgctcacgggaca 52743222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 56 - 89
Target Start/End: Original strand, 6082872 - 6082905
Alignment:
Q  56 ttcaccttataagatgaataagtgggatgttcgg 89  Q
    ||||||||||||||||||||| ||||||||||||    
T  6082872 ttcaccttataagatgaataaatgggatgttcgg 6082905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 66 - 103
Target Start/End: Complemental strand, 8434841 - 8434804
Alignment:
Q  66 aagatgaataagtgggatgttcggagttcgaatctcaa 103  Q
    |||||||||||||||||| ||||||||||||| |||||    
T  8434841 aagatgaataagtgggatattcggagttcgaaactcaa 8434804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 40 - 97
Target Start/End: Original strand, 10757760 - 10757817
Alignment:
Q  40 agtctagtggctagatttcaccttataagatgaataagtgggatgttcggagttcgaa 97  Q
    |||||| |||||||| || |||||||||| |||||||||||| ||| ||| |||||||    
T  10757760 agtctaatggctagaatttaccttataaggtgaataagtggggtgtccggggttcgaa 10757817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #81
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 40 - 97
Target Start/End: Original strand, 10970931 - 10970988
Alignment:
Q  40 agtctagtggctagatttcaccttataagatgaataagtgggatgttcggagttcgaa 97  Q
    |||||| |||||||| || |||||||||| |||||||||||| ||| ||| |||||||    
T  10970931 agtctaatggctagaatttaccttataaggtgaataagtggggtgtccggggttcgaa 10970988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #82
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 110 - 155
Target Start/End: Original strand, 13211407 - 13211452
Alignment:
Q  110 catataataatacattgtcctaccaactgatcaatgctcacgggac 155  Q
    ||||||||||| |||||||||||||||||| | || ||||||||||    
T  13211407 catataataatgcattgtcctaccaactgaactatactcacgggac 13211452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #83
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 36 - 81
Target Start/End: Complemental strand, 20266977 - 20266932
Alignment:
Q  36 aggtagtctagtggctagatttcaccttataagatgaataagtggg 81  Q
    |||||| || ||||||||| ||||||||||||| ||||||||||||    
T  20266977 aggtagcctggtggctagaattcaccttataaggtgaataagtggg 20266932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #84
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 36 - 81
Target Start/End: Complemental strand, 30152228 - 30152183
Alignment:
Q  36 aggtagtctagtggctagatttcaccttataagatgaataagtggg 81  Q
    |||||| ||| |||||||| ||||||||||||| ||||||||||||    
T  30152228 aggtagcctattggctagaattcaccttataaggtgaataagtggg 30152183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #85
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 36 - 81
Target Start/End: Complemental strand, 30295627 - 30295582
Alignment:
Q  36 aggtagtctagtggctagatttcaccttataagatgaataagtggg 81  Q
    |||||| |||||||||||| |||||||| |||| ||||||||||||    
T  30295627 aggtagcctagtggctagaattcaccttctaaggtgaataagtggg 30295582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #86
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 36 - 81
Target Start/End: Complemental strand, 30324529 - 30324484
Alignment:
Q  36 aggtagtctagtggctagatttcaccttataagatgaataagtggg 81  Q
    |||||| |||||||||||| |||||||| |||| ||||||||||||    
T  30324529 aggtagcctagtggctagaattcaccttctaaggtgaataagtggg 30324484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #87
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 36 - 137
Target Start/End: Complemental strand, 33536339 - 33536238
Alignment:
Q  36 aggtagtctagtggctagatttcaccttataagatgaataagtgggatgttcggagttcgaatctcaaatcctacatataataatacattgtcctaccaa 135  Q
    |||||||||||||| |  | |||||||||||| |||||||| | |||||| ||   |||||| ||| |  |||||||| |||||| ||||||| ||||||    
T  33536339 aggtagtctagtggttgaaattcaccttataaaatgaataaattggatgtccgagattcgaacctcgacccctacataaaataatgcattgtcttaccaa 33536240  T
Q  136 ct 137  Q
    ||    
T  33536239 ct 33536238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #88
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 108 - 152
Target Start/End: Complemental strand, 20955540 - 20955496
Alignment:
Q  108 tacatataataatacattgtcctaccaactgatcaatgctcacgg 152  Q
    |||||||||||||||||||||||| |||||||   ||||||||||    
T  20955540 tacatataataatacattgtcctatcaactgagttatgctcacgg 20955496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #89
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 110 - 154
Target Start/End: Complemental strand, 26253992 - 26253948
Alignment:
Q  110 catataataatacattgtcctaccaactgatcaatgctcacggga 154  Q
    |||||||||||||||||| ||||||||||| | ||||||| ||||    
T  26253992 catataataatacattgttctaccaactgaactatgctcatggga 26253948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #90
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 36 - 68
Target Start/End: Complemental strand, 37739220 - 37739188
Alignment:
Q  36 aggtagtctagtggctagatttcaccttataag 68  Q
    ||||||||||||||||||| |||||||||||||    
T  37739220 aggtagtctagtggctagaattcaccttataag 37739188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #91
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 105 - 157
Target Start/End: Original strand, 46482867 - 46482919
Alignment:
Q  105 tcctacatataataatacattgtcctaccaactgatcaatgctcacgggacac 157  Q
    |||| |||||||||||  |||||||||||||||||   |||||||||||||||    
T  46482867 tcctgcatataataatgtattgtcctaccaactgaattatgctcacgggacac 46482919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #92
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 110 - 154
Target Start/End: Original strand, 55266490 - 55266534
Alignment:
Q  110 catataataatacattgtcctaccaactgatcaatgctcacggga 154  Q
    ||||||||||| |||||| ||||||||||| | ||||||||||||    
T  55266490 catataataatgcattgttctaccaactgagctatgctcacggga 55266534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 67; Significance: 1e-29; HSPs: 64)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 44 - 150
Target Start/End: Original strand, 36426845 - 36426951
Alignment:
Q  44 tagtggctagatttcaccttataagatgaataagtgggatgttcggagttcgaatctcaaatcctacatataataatacattgtcctaccaactgatcaa 143  Q
    ||||||||||| |||||||||||||||||||||||||| ||||||||||||||| | |||  ||||||||||||||| |||||||||||||| ||| | |    
T  36426845 tagtggctagaattcaccttataagatgaataagtggggtgttcggagttcgaaccccaacccctacatataataatgcattgtcctaccaagtgagcta 36426944  T
Q  144 tgctcac 150  Q
    |||||||    
T  36426945 tgctcac 36426951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 36 - 154
Target Start/End: Original strand, 20122456 - 20122574
Alignment:
Q  36 aggtagtctagtggctagatttcaccttataagatgaataagtgggatgttcggagttcgaatctcaaatcctacatataataatacattgtcctaccaa 135  Q
    |||||| |||||||||||| |||||||||||||||||||||||||  ||| ||| ||||||| | |    ||||||||||||||| ||||||||||||||    
T  20122456 aggtagcctagtggctagaattcaccttataagatgaataagtggcgtgtccggggttcgaaccccggcccctacatataataatgcattgtcctaccaa 20122555  T
Q  136 ctgatcaatgctcacggga 154  Q
    |||| | ||||||||||||    
T  20122556 ctgagctatgctcacggga 20122574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 36 - 156
Target Start/End: Original strand, 8234773 - 8234893
Alignment:
Q  36 aggtagtctagtggctagatttcaccttataagatgaataagtgggatgttcggagttcgaatctcaaatcctacatataataatacattgtcctaccaa 135  Q
    |||||| |||||||||||| ||||||||||||| |||||||||||| ||| ||| ||||||| | |    |||||||||||||||  |||||||||||||    
T  8234773 aggtagcctagtggctagaattcaccttataaggtgaataagtggggtgtccggggttcgaaccccggcccctacatataataatgtattgtcctaccaa 8234872  T
Q  136 ctgatcaatgctcacgggaca 156  Q
    |||| | ||||||||||||||    
T  8234873 ctgagctatgctcacgggaca 8234893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 36 - 156
Target Start/End: Original strand, 9547108 - 9547228
Alignment:
Q  36 aggtagtctagtggctagatttcaccttataagatgaataagtgggatgttcggagttcgaatctcaaatcctacatataataatacattgtcctaccaa 135  Q
    |||||||||| |||||||| |||||||||||||||||||||||||| |||||||  |||||| | |    ||| |||||||||||||||||||||| |||    
T  9547108 aggtagtctattggctagaattcaccttataagatgaataagtggggtgttcgggattcgaaccccggcccctgcatataataatacattgtcctatcaa 9547207  T
Q  136 ctgatcaatgctcacgggaca 156  Q
    |||| | ||| ||||||||||    
T  9547208 ctgagctatgttcacgggaca 9547228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 36 - 155
Target Start/End: Complemental strand, 7086367 - 7086248
Alignment:
Q  36 aggtagtctagtggctagatttcaccttataagatgaataagtgggatgttcggagttcgaatctcaaatcctacatataataatacattgtcctaccaa 135  Q
    |||||||||||||| |||| ||||||||||||| ||||||| |||| ||||||| ||||||||| |    ||| ||||||||||| ||||| ||||||||    
T  7086367 aggtagtctagtggttagaattcaccttataaggtgaataattggggtgttcggggttcgaatcccggcccctgcatataataatgcattgccctaccaa 7086268  T
Q  136 ctgatcaatgctcacgggac 155  Q
    |||| | |||||||||||||    
T  7086267 ctgagctatgctcacgggac 7086248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 36 - 156
Target Start/End: Original strand, 580764 - 580884
Alignment:
Q  36 aggtagtctagtggctagatttcaccttataagatgaataagtgggatgttcggagttcgaatctcaaatcctacatataataatacattgtcctaccaa 135  Q
    |||||| |||||||||||| |||| |||||||| |||||||||||| ||| ||| ||||||| | |    ||| ||||||||||| ||||||||||||||    
T  580764 aggtagcctagtggctagaattcatcttataaggtgaataagtggggtgtccggggttcgaaccccggcccctgcatataataatgcattgtcctaccaa 580863  T
Q  136 ctgatcaatgctcacgggaca 156  Q
    |||| | ||||||||||||||    
T  580864 ctgagctatgctcacgggaca 580884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 36 - 156
Target Start/End: Original strand, 2114416 - 2114536
Alignment:
Q  36 aggtagtctagtggctagatttcaccttataagatgaataagtgggatgttcggagttcgaatctcaaatcctacatataataatacattgtcctaccaa 135  Q
    |||||||| |||||||||| ||||||||||||| ||||||| || | ||| ||| ||||||| | | |  ||||||||||||||| |||||| |||||||    
T  2114416 aggtagtccagtggctagaattcaccttataaggtgaataaatgaggtgtccggggttcgaaccccgacccctacatataataatgcattgttctaccaa 2114515  T
Q  136 ctgatcaatgctcacgggaca 156  Q
    |||| | ||||||||||||||    
T  2114516 ctgagctatgctcacgggaca 2114536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 36 - 155
Target Start/End: Complemental strand, 16974022 - 16973903
Alignment:
Q  36 aggtagtctagtggctagatttcaccttataagatgaataagtgggatgttcggagttcgaatctcaaatcctacatataataatacattgtcctaccaa 135  Q
    ||||||| |||||| |||| ||||||||||||| | |||||||||| ||| ||| |||||||||  ||  ||| ||||||||||| ||||||||||| ||    
T  16974022 aggtagtttagtgggtagaattcaccttataaggtaaataagtggggtgtccggggttcgaatcctaacccctgcatataataatccattgtcctacaaa 16973923  T
Q  136 ctgatcaatgctcacgggac 155  Q
    |||| | |||||||||||||    
T  16973922 ctgagctatgctcacgggac 16973903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 36 - 155
Target Start/End: Complemental strand, 22538653 - 22538534
Alignment:
Q  36 aggtagtctagtggctagatttcaccttataagatgaataagtgggatgttcggagttcgaatctcaaatcctacatataataatacattgtcctaccaa 135  Q
    |||||| |||||||||||| ||||||||||||| |||||||||| | |||||||  |||||| | |||  ||| ||||||||||| ||||||||||||||    
T  22538653 aggtagcctagtggctagaattcaccttataaggtgaataagtgaggtgttcgggattcgaaccccaacccctgcatataataatgcattgtcctaccaa 22538554  T
Q  136 ctgatcaatgctcacgggac 155  Q
    ||||   | |||||||||||    
T  22538553 ctgagttaggctcacgggac 22538534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 45 - 156
Target Start/End: Original strand, 30474185 - 30474296
Alignment:
Q  45 agtggctagatttcaccttataagatgaataagtgggatgttcggagttcgaatctcaaatcctacatataataatacattgtcctaccaactgatcaat 144  Q
    |||||||||| ||||||||||||| |||||||||||| |||  || ||||||| |||    ||| ||||||||||| |||||||||||||||||| | ||    
T  30474185 agtggctagaattcaccttataaggtgaataagtggggtgtctggggttcgaacctcggcccctgcatataataatgcattgtcctaccaactgagctat 30474284  T
Q  145 gctcacgggaca 156  Q
    ||||||||||||    
T  30474285 gctcacgggaca 30474296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 43 - 155
Target Start/End: Complemental strand, 1836695 - 1836583
Alignment:
Q  43 ctagtggctagatttcaccttataagatgaataagtgggatgttcggagttcgaatctcaaatcctacatataataatacattgtcctaccaactgatca 142  Q
    |||||||||||| ||||||||||| | ||||||||| || ||| ||| ||||||| | | | |||| ||||||||||| |||||||||||||||||| |     
T  1836695 ctagtggctagaattcaccttatatggtgaataagtagggtgtccggggttcgaaccccgattccttcatataataatgcattgtcctaccaactgagct 1836596  T
Q  143 atgctcacgggac 155  Q
    | |||||||||||    
T  1836595 aggctcacgggac 1836583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 36 - 156
Target Start/End: Complemental strand, 3179438 - 3179318
Alignment:
Q  36 aggtagtctagtggctagatttcaccttataagatgaataagtgggatgttcggagttcgaatctcaaatcctacatataataatacattgtcctaccaa 135  Q
    |||||| |||||||||||| ||||||||||||| |||||||||||| |||  |  ||||||| ||| |  ||| ||||||||||| |||||| |||||||    
T  3179438 aggtagcctagtggctagaattcaccttataaggtgaataagtggggtgtctgaggttcgaacctcgacccctgcatataataatgcattgttctaccaa 3179339  T
Q  136 ctgatcaatgctcacgggaca 156  Q
    ||||   ||||||||||||||    
T  3179338 ctgagttatgctcacgggaca 3179318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 36 - 156
Target Start/End: Original strand, 39726416 - 39726535
Alignment:
Q  36 aggtagtctagtggctagatttcaccttataagatgaataagtgggatgttcggagttcgaatctcaaatcctacatataataatacattgtcctaccaa 135  Q
    ||||||||||||||||||| ||||  ||||||| | ||||||||| |||||||  ||||||| ||| |  ||||||||||||||| ||||||||||||||    
T  39726416 aggtagtctagtggctagaattcattttataaggtaaataagtgg-atgttcgaggttcgaacctcgacccctacatataataatgcattgtcctaccaa 39726514  T
Q  136 ctgatcaatgctcacgggaca 156  Q
    |||| | |  |||||||||||    
T  39726515 ctgagctagactcacgggaca 39726535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 40 - 155
Target Start/End: Complemental strand, 17240011 - 17239896
Alignment:
Q  40 agtctagtggctagatttcaccttataagatgaataagtgggatgttcggagttcgaatctcaaatcctacatataataatacattgtcctaccaactga 139  Q
    ||||| |||| |||| |||||||||||||||||||||||||| ||| ||  ||||||||| | |  ||| ||||||||||| |||||| |||||||||||    
T  17240011 agtctggtggttagaattcaccttataagatgaataagtggggtgtccgaggttcgaatcccgacccctgcatataataatgcattgttctaccaactga 17239912  T
Q  140 tcaatgctcacgggac 155  Q
     | ||||||| |||||    
T  17239911 gctatgctcatgggac 17239896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 36 - 139
Target Start/End: Complemental strand, 32891395 - 32891292
Alignment:
Q  36 aggtagtctagtggctagatttcaccttataagatgaataagtgggatgttcggagttcgaatctcaaatcctacatataataatacattgtcctaccaa 135  Q
    |||||| |||||||||||| |||| ||||||||||||||||||||| ||| ||| |||||||   | |  ||| ||||||||||| ||||||||||||||    
T  32891395 aggtagcctagtggctagaattcatcttataagatgaataagtggggtgtccggggttcgaaaaccgacccctgcatataataatgcattgtcctaccaa 32891296  T
Q  136 ctga 139  Q
    ||||    
T  32891295 ctga 32891292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 36 - 149
Target Start/End: Original strand, 16762770 - 16762882
Alignment:
Q  36 aggtagtctagtggctagatttcaccttataagatgaataagtgggatgttcggagttcgaatctcaaatcctacatataataatacattgtcctaccaa 135  Q
    |||||| ||||||| || | |||||||||| |||    |||||||| ||||||| ||||||||| |||||||||||||||| ||| ||||||||||||||    
T  16762770 aggtagcctagtggttaaaattcaccttatcagaaatgtaagtggggtgttcgg-gttcgaatcccaaatcctacatataaaaatgcattgtcctaccaa 16762868  T
Q  136 ctgatcaatgctca 149  Q
    |||| | |||||||    
T  16762869 ctgagctatgctca 16762882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 38 - 135
Target Start/End: Original strand, 18386795 - 18386892
Alignment:
Q  38 gtagtctagtggctagatttcaccttataagatgaataagtgggatgttcggagttcgaatctcaaatcctacatataataatacattgtcctaccaa 135  Q
    |||| |||| ||||||| |||| |||||||| |||||||||||| ||| ||||||||||| | ||   ||||||||||||||| ||||||||||||||    
T  18386795 gtagcctagcggctagaattcatcttataaggtgaataagtggggtgtccggagttcgaaccccagcccctacatataataatgcattgtcctaccaa 18386892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 51 - 151
Target Start/End: Original strand, 9791891 - 9791991
Alignment:
Q  51 tagatttcaccttataagatgaataagtgggatgttcggagttcgaatctcaaatcctacatataataatacattgtcctaccaactgatcaatgctcac 150  Q
    |||| |||| ||||||||||||||||||||| ||| | || |||||| | | |  ||||||||||||||| |||||||||||||||||| | ||||||||    
T  9791891 tagaattcatcttataagatgaataagtggggtgtccagaattcgaaccccgacacctacatataataatgcattgtcctaccaactgaactatgctcac 9791990  T
Q  151 g 151  Q
    |    
T  9791991 g 9791991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 39 - 139
Target Start/End: Original strand, 16028092 - 16028192
Alignment:
Q  39 tagtctagtggctagatttcaccttataagatgaataagtgggatgttcggagttcgaatctcaaatcctacatataataatacattgtcctaccaactg 138  Q
    |||||| ||||||||| ||||||||||||  ||||||||||||||||  |||||||||| | | |   || ||||||||||| |||||||||||||||||    
T  16028092 tagtctggtggctagaattcaccttataaagtgaataagtgggatgtctggagttcgaaccccgaccactgcatataataatgcattgtcctaccaactg 16028191  T
Q  139 a 139  Q
    |    
T  16028192 a 16028192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 36 - 156
Target Start/End: Complemental strand, 17154763 - 17154643
Alignment:
Q  36 aggtagtctagtggctagatttcaccttataagatgaataagtgggatgttcggagttcgaatctcaaatcctacatataataatacattgtcctaccaa 135  Q
    |||||| ||||||||||||  |||||||||||| |||||||||||| ||| ||| ||||||| | |    ||| ||||||||||| ||||||||||||||    
T  17154763 aggtagcctagtggctagaactcaccttataaggtgaataagtggggtgtccggggttcgaaccccggcccctgcatataataatgcattgtcctaccaa 17154664  T
Q  136 ctgatcaatgctcacgggaca 156  Q
    | ||   ||||||||||||||    
T  17154663 ccgagttatgctcacgggaca 17154643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 36 - 155
Target Start/End: Complemental strand, 31564203 - 31564090
Alignment:
Q  36 aggtagtctagtggctagatttcaccttataagatgaataagtgggatgttcggagttcgaatctcaaatcctacatataataatacattgtcctaccaa 135  Q
    ||||||||||||||||||| |||| |||||||| |||||||||||| | | ||| ||||||| |      ||| ||||||||||| ||||||||||||||    
T  31564203 aggtagtctagtggctagaattcatcttataaggtgaataagtggggtttccggggttcgaacc------cctgcatataataatgcattgtcctaccaa 31564110  T
Q  136 ctgatcaatgctcacgggac 155  Q
    ||||   |||||||||||||    
T  31564109 ctgagttatgctcacgggac 31564090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 36 - 139
Target Start/End: Complemental strand, 31956981 - 31956877
Alignment:
Q  36 aggtagtctagtggctagatttcaccttataagatgaataagtggga-tgttcggagttcgaatctcaaatcctacatataataatacattgtcctacca 134  Q
    |||||| || |||| |||| ||||||||||||  ||||||||||||  ||||||||||||||| | ||   ||||||||||||||| |||||||||||||    
T  31956981 aggtagcctggtggttagaattcaccttataacgtgaataagtgggggtgttcggagttcgaaccccagcccctacatataataatgcattgtcctacca 31956882  T
Q  135 actga 139  Q
    |||||    
T  31956881 actga 31956877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 43 - 153
Target Start/End: Complemental strand, 11133183 - 11133072
Alignment:
Q  43 ctagtggctagatttcaccttataagatgaataagtgggatgttcggagttcgaatctcaaatcctacatataataatacattgt-cctaccaactgatc 141  Q
    |||||||||||| ||||||||||||| |||||||||||| ||| ||| ||||||| | | |  ||| ||||||| ||| |||||| |||||||||||| |    
T  11133183 ctagtggctagaattcaccttataaggtgaataagtggggtgtccggggttcgaaccccgacccctgcatataacaatgcattgtccctaccaactgagc 11133084  T
Q  142 aatgctcacggg 153  Q
     |||||||||||    
T  11133083 tatgctcacggg 11133072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 36 - 155
Target Start/End: Original strand, 15392192 - 15392311
Alignment:
Q  36 aggtagtctagtggctagatttcaccttataagatgaataagtgggatgttcggagttcgaatctcaaatcctacatataataatacattgtcctaccaa 135  Q
    |||||| |||||||||| | | ||||||||||  |||||||||| | ||| ||  ||||||| |||   |||||||||||||||| ||||||||||||||    
T  15392192 aggtagcctagtggctaaaatacaccttataaagtgaataagtgaggtgtccgaggttcgaacctcgtctcctacatataataatgcattgtcctaccaa 15392291  T
Q  136 ctgatcaatgctcacgggac 155  Q
    ||||   |||||||||||||    
T  15392292 ctgagttatgctcacgggac 15392311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 36 - 156
Target Start/End: Original strand, 18209922 - 18210045
Alignment:
Q  36 aggtagtctagtggctagatttcaccttataagatgaataagtgggatgttcggagttcgaatctcaaat----cctacatataataatacattgtccta 131  Q
    |||||| |||||||||| | ||||||||||||| ||||||| || |||||| |||||||||| ||| |      ||||||||||||||||||||||||||    
T  18209922 aggtagcctagtggctataattcaccttataaggtgaataaatgagatgtttggagttcgaa-ctccagcggcccctacatataataatacattgtccta 18210020  T
Q  132 ccaactgatcaatgctcacgggaca 156  Q
    ||||| || | ||||||||| ||||    
T  18210021 ccaaccgagctatgctcacgagaca 18210045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 72 - 139
Target Start/End: Complemental strand, 27495616 - 27495549
Alignment:
Q  72 aataagtgggatgttcggagttcgaatctcaaatcctacatataataatacattgtcctaccaactga 139  Q
    ||||||| |||||||||| |||||||||||||  ||| ||||||||||| ||||||||||||||||||    
T  27495616 aataagtaggatgttcggggttcgaatctcaacccctgcatataataatgcattgtcctaccaactga 27495549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 40 - 131
Target Start/End: Complemental strand, 32891709 - 32891618
Alignment:
Q  40 agtctagtggctagatttcaccttataagatgaataagtgggatgttcggagttcgaatctcaaatcctacatataataatacattgtccta 131  Q
    ||||||||||||| | |||||||| ||||||||||||||||| ||||| | ||||||| | |||  ||| ||||||||||| ||||||||||    
T  32891709 agtctagtggctaaaattcaccttgtaagatgaataagtggggtgttcagggttcgaaccccaacccctgcatataataatgcattgtccta 32891618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 36 - 129
Target Start/End: Complemental strand, 9797011 - 9796918
Alignment:
Q  36 aggtagtctagtggctagatttcaccttataagatgaataagtgggatgttcggagttcgaatctcaaatcctacatataataatacattgtcc 129  Q
    |||||| |||||| ||||| |||||||||||||||||||||||||| ||| ||| ||||||| | | |  ||| ||||||||||| ||||||||    
T  9797011 aggtaggctagtgtctagaattcaccttataagatgaataagtggggtgtccggggttcgaaccccgacccctgcatataataatgcattgtcc 9796918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 36 - 81
Target Start/End: Complemental strand, 29664717 - 29664672
Alignment:
Q  36 aggtagtctagtggctagatttcaccttataagatgaataagtggg 81  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||    
T  29664717 aggtagtctagtggctagaattcaccttataagatgaataagtggg 29664672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 36 - 154
Target Start/End: Original strand, 17115525 - 17115643
Alignment:
Q  36 aggtagtctagtggctagatttcaccttataagatgaataagtgggatgttcggagttcgaatctcaaatccta-catataataatacattgtcctacca 134  Q
    |||||| ||||| |||||| ||||||||||||  ||||||| |||||||| ||| ||||||| |||  | | |  |||||||||||||| ||||||||||    
T  17115525 aggtagcctagttgctagaattcaccttataaagtgaataaatgggatgtccggggttcgaa-ctccgacctttgcatataataatacagtgtcctacca 17115623  T
Q  135 actgatcaatgctcacggga 154  Q
    ||||| | ||||||||||||    
T  17115624 actgagctatgctcacggga 17115643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 36 - 139
Target Start/End: Original strand, 30471952 - 30472055
Alignment:
Q  36 aggtagtctagtggctagatttcaccttataagatgaataagtgggatgttcggagttcgaatctcaaatcctacatataataatacattgtcctaccaa 135  Q
    ||||||| ||||||||||| ||||||||||||  ||||||| ||| ||||||||||||| ||   | | |||||||||||||||   ||||||||| |||    
T  30471952 aggtagtttagtggctagaattcaccttataaagtgaataaatggaatgttcggagttcaaactccgactcctacatataataaagtattgtcctatcaa 30472051  T
Q  136 ctga 139  Q
    ||||    
T  30472052 ctga 30472055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 56 - 155
Target Start/End: Original strand, 30811833 - 30811932
Alignment:
Q  56 ttcaccttataagatgaataagtgggatgttcggagttcgaatctcaaatcctacatataataatacattgtcctaccaactgatcaatgctcacgggac 155  Q
    |||| |||||||| |||||||||||||||| || |||||||||| |||  | || || ||||||| ||||||||||| |||||| | ||| |||||||||    
T  30811833 ttcatcttataaggtgaataagtgggatgtccgaagttcgaatcccaacccttatatgtaataatgcattgtcctactaactgagctatggtcacgggac 30811932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 36 - 139
Target Start/End: Complemental strand, 45523779 - 45523676
Alignment:
Q  36 aggtagtctagtggctagatttcaccttataagatgaataagtgggatgttcggagttcgaatctcaaatcctacatataataatacattgtcctaccaa 135  Q
    ||||||| |||||| |||| ||||||||||||| |||||| ||| | |||| || ||||||| | | |  ||| |||||||| |||||||||||||||||    
T  45523779 aggtagtttagtggttagaattcaccttataaggtgaataggtgaggtgtttggggttcgaaccccgacccctgcatataattatacattgtcctaccaa 45523680  T
Q  136 ctga 139  Q
    ||||    
T  45523679 ctga 45523676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 61 - 135
Target Start/End: Original strand, 19052617 - 19052691
Alignment:
Q  61 cttataagatgaataagtgggatgttcggagttcgaatctcaaatcctacatataataatacattgtcctaccaa 135  Q
    ||||||||||||||||||||||||| ||| |||||||||   |  ||| ||||||||||| ||||||||||||||    
T  19052617 cttataagatgaataagtgggatgtccggggttcgaatcctgacccctgcatataataatgcattgtcctaccaa 19052691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 37 - 151
Target Start/End: Original strand, 22297434 - 22297548
Alignment:
Q  37 ggtagtctagtggctagatttcaccttataagatgaataagtgggatgttcggagttcgaatctcaaatcctacatataataatacattgtcctaccaac 136  Q
    |||||| ||||||||||| || || ||||||| ||||||| |||| ||| ||| ||||||| | |    ||| ||||||||||| |||||||||||||||    
T  22297434 ggtagtttagtggctagaattaacattataaggtgaataaatggggtgtccggggttcgaacccctgcccctgcatataataatgcattgtcctaccaac 22297533  T
Q  137 tgatcaatgctcacg 151  Q
    ||| | |||||||||    
T  22297534 tgagctatgctcacg 22297548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 70 - 156
Target Start/End: Original strand, 36520795 - 36520881
Alignment:
Q  70 tgaataagtgggatgttcggagttcgaatctcaaatcctacatataataatacattgtcctaccaactgatcaatgctcacgggaca 156  Q
    |||||||||||| ||| ||| ||||||| | | |  ||||||||||||||| |||||||||||||||||| | | ||||||||||||    
T  36520795 tgaataagtggggtgtccggggttcgaaccccgacccctacatataataatgcattgtcctaccaactgagctacgctcacgggaca 36520881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 43 - 156
Target Start/End: Complemental strand, 14879235 - 14879122
Alignment:
Q  43 ctagtggctagatttcaccttataagatgaataagtgggatgttcggagttcgaatctcaaatcctacatataataatacattgtcctaccaactgatca 142  Q
    ||||| |||||| ||||||||||||| ||||||||| || | || || ||| |||  |||   |||||||||||||||  |||||||||||||| || |     
T  14879235 ctagttgctagaattcaccttataaggtgaataagttgggtatttggggtttgaacttcagcccctacatataataatgtattgtcctaccaacggaact 14879136  T
Q  143 atgctcacgggaca 156  Q
    ||||||||||||||    
T  14879135 atgctcacgggaca 14879122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 39 - 155
Target Start/End: Complemental strand, 10262850 - 10262734
Alignment:
Q  39 tagtctagtggctagatttcaccttataagatgaataagtgggatgttcggagttcgaatctcaaatcctacatataataatacattgtcctaccaactg 138  Q
    |||| ||| ||||| | ||||| ||||||| |||||||||||| |||  || ||||||| | | |  ||| ||||||||||| |||||||||||||||||    
T  10262850 tagtttaggggctataattcactttataaggtgaataagtggggtgtctggggttcgaaccccgacccctgcatataataatgcattgtcctaccaactg 10262751  T
Q  139 atcaatgctcacgggac 155  Q
    |   |||||||||||||    
T  10262750 agttatgctcacgggac 10262734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 38 - 154
Target Start/End: Complemental strand, 32988462 - 32988346
Alignment:
Q  38 gtagtctagtggctagatttcaccttataagatgaataagtgggatgttcggagttcgaatctcaaatcctacatataataatacattgtcctaccaact 137  Q
    ||||||||||| ||||| ||||| ||||||   ||||||||||| ||||||  ||||||| | ||   ||| | ||||||||| ||||||| ||||||||    
T  32988462 gtagtctagtgactagaattcactttataaagagaataagtggggtgttcgatgttcgaaccccagcccctgcgtataataatgcattgtcttaccaact 32988363  T
Q  138 gatcaatgctcacggga 154  Q
    || | ||||||||||||    
T  32988362 gagctatgctcacggga 32988346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 36 - 156
Target Start/End: Original strand, 33001534 - 33001654
Alignment:
Q  36 aggtagtctagtggctagatttcaccttataagatgaataagtgggatgttcggagttcgaatctcaaatcctacatataataatacattgtcctaccaa 135  Q
    |||||| ||||| |||||| |||||||||||||||||||||||||| ||| |||  ||| || | |    | | ||||||||||  ||||||||||||||    
T  33001534 aggtagcctagtagctagaattcaccttataagatgaataagtggggtgtccgggattcaaaccccggcccttgcatataataacgcattgtcctaccaa 33001633  T
Q  136 ctgatcaatgctcacgggaca 156  Q
    ||||   ||||||||||||||    
T  33001634 ctgagttatgctcacgggaca 33001654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 36 - 152
Target Start/End: Complemental strand, 38820688 - 38820573
Alignment:
Q  36 aggtagtctagtggctagatttcaccttataagatgaataagtgggatgttcggagttcgaatctcaaatcctacatataataatacattgtcctaccaa 135  Q
    ||||||| || |||||||| ||||||||||||||||||||| |||| || || | |||| || | ||   ||||||||||||||| |||||||||| |||    
T  38820688 aggtagtttaatggctagaattcaccttataagatgaataaatggggtg-tctgggttcaaaccccagcccctacatataataatgcattgtcctaacaa 38820590  T
Q  136 ctgatcaatgctcacgg 152  Q
    |||| | ||| ||||||    
T  38820589 ctgagctatgttcacgg 38820573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 39 - 139
Target Start/End: Original strand, 42091259 - 42091358
Alignment:
Q  39 tagtctagtggctagatttcaccttataagatgaataagtgggatgttcggagttcgaatctcaaatcctacatataataatacattgtcctaccaactg 138  Q
    |||||||||||||| | |||||||| |||| |||||||||||| ||||||| |||||||   |   ||||  |||||||||| |||||||||||||||||    
T  42091259 tagtctagtggctaaaattcaccttgtaaggtgaataagtgggttgttcgg-gttcgaactccggctcctgaatataataatgcattgtcctaccaactg 42091357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 43 - 139
Target Start/End: Original strand, 44721692 - 44721788
Alignment:
Q  43 ctagtggctagatttcaccttataagatgaataagtgggatgttcggagttcgaatctcaaatcctacatataataatacattgtcctaccaactga 139  Q
    |||||||||||| ||||||||||||| ||||||| |||| ||| ||  ||||||| | | |  ||| ||||||||||| |||||| |||||||||||    
T  44721692 ctagtggctagaattcaccttataaggtgaataaatggggtgtccgaggttcgaaccccgacccctgcatataataatgcattgttctaccaactga 44721788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 43 - 137
Target Start/End: Complemental strand, 3364832 - 3364738
Alignment:
Q  43 ctagtggctagatttcaccttataagatgaataagtgggatgttcggagttcgaatctcaaatcctacatataataatacattgtcctaccaact 137  Q
    |||||||||||| ||||||||| |||||||||||||||| |||    |||||||| |||    ||| |||||||||||  |||||||||||||||    
T  3364832 ctagtggctagaattcaccttaaaagatgaataagtggggtgtctaaagttcgaacctcggcccctgcatataataatgtattgtcctaccaact 3364738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 38 - 153
Target Start/End: Complemental strand, 34107388 - 34107271
Alignment:
Q  38 gtagtctagtggctagatttcaccttat--aagatgaataagtgggatgttcggagttcgaatctcaaatcctacatataataatacattgtcctaccaa 135  Q
    ||||||||||||||||| ||||| || |  ||| |||||||||||| |||  |||||||||| |||||  ||| |||||||| ||||||   ||| ||||    
T  34107388 gtagtctagtggctagaattcacatttttcaaggtgaataagtggggtgtctggagttcgaacctcaacccctgcatataattatacatgtccctgccaa 34107289  T
Q  136 ctgatcaatgctcacggg 153  Q
    |||| | |||||||||||    
T  34107288 ctgagctatgctcacggg 34107271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 36 - 97
Target Start/End: Original strand, 3037603 - 3037664
Alignment:
Q  36 aggtagtctagtggctagatttcaccttataagatgaataagtgggatgttcggagttcgaa 97  Q
    |||||| |||||| ||||| ||||||||||||| |||||||||||| ||| ||| |||||||    
T  3037603 aggtagcctagtgcctagaattcaccttataaggtgaataagtggggtgtccggggttcgaa 3037664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 36 - 81
Target Start/End: Original strand, 14483638 - 14483683
Alignment:
Q  36 aggtagtctagtggctagatttcaccttataagatgaataagtggg 81  Q
    |||||||||| ||| |||| ||||||||||||||||||||||||||    
T  14483638 aggtagtctattggttagaattcaccttataagatgaataagtggg 14483683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 54 - 139
Target Start/End: Complemental strand, 18007345 - 18007260
Alignment:
Q  54 atttcaccttataagatgaataagtgggatgttcggagttcgaatctcaaatcctacatataataatacattgtcctaccaactga 139  Q
    ||||||| |||||| ||||||||||||| |||  || ||| ||| | |||    ||||||||||||||||||||||||||||||||    
T  18007345 atttcactttataaaatgaataagtggggtgtatggggtttgaaccccaacctttacatataataatacattgtcctaccaactga 18007260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 38 - 151
Target Start/End: Complemental strand, 34620630 - 34620517
Alignment:
Q  38 gtagtctagtggctagatttcaccttataagatgaataagtgggatgttcggagttcgaatctcaaatcctacatataataatacattgtcctaccaact 137  Q
    ||||||||||||||||| ||||||||||||| ||||||| | |  |||  || |||| || | |||  | | ||||||||||| |||||||||||||||     
T  34620630 gtagtctagtggctagaattcaccttataaggtgaataaatagagtgtctggggttcaaaccccaacccttgcatataataatgcattgtcctaccaacc 34620531  T
Q  138 gatcaatgctcacg 151  Q
    || | |||||||||    
T  34620530 gagctatgctcacg 34620517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 36 - 152
Target Start/End: Complemental strand, 44422221 - 44422105
Alignment:
Q  36 aggtagtctagtggctagatttcaccttataagatgaataagtgggatgttcggagttcgaatctcaaat-cctacatataataatacattgtcctacca 134  Q
    |||||| ||||||| |||| || |||||||||  |||||||||||| ||| ||| ||||||| |||  || ||| ||||||||||| |||||||||||||    
T  44422221 aggtagcctagtggttagaatttaccttataaagtgaataagtggggtgtccggggttcgaa-ctccgatccctgcatataataatgcattgtcctacca 44422123  T
Q  135 actgatcaatgctcacgg 152  Q
    | | | | ||||||||||    
T  44422122 aataagccatgctcacgg 44422105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 43 - 80
Target Start/End: Complemental strand, 44951013 - 44950976
Alignment:
Q  43 ctagtggctagatttcaccttataagatgaataagtgg 80  Q
    |||||||||||| |||||||||||||||||||||||||    
T  44951013 ctagtggctagaattcaccttataagatgaataagtgg 44950976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 37 - 77
Target Start/End: Complemental strand, 41699490 - 41699450
Alignment:
Q  37 ggtagtctagtggctagatttcaccttataagatgaataag 77  Q
    |||||||||||||||||| ||||||||||||| ||||||||    
T  41699490 ggtagtctagtggctagaattcaccttataaggtgaataag 41699450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 36 - 135
Target Start/End: Original strand, 19905636 - 19905735
Alignment:
Q  36 aggtagtctagtggctagatttcaccttataagatgaataagtgggatgttcggagttcgaatctcaaatcctacatataataatacattgtcctaccaa 135  Q
    |||||| ||| |||||||| ||||||||||||| ||||||||| || ||| ||| ||||||| | | |  |||  |||||||||| |||||||| |||||    
T  19905636 aggtagcctaatggctagaattcaccttataaggtgaataagtcgggtgtccggggttcgaaccccgacccctgtatataataatgcattgtccaaccaa 19905735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 110 - 157
Target Start/End: Complemental strand, 36481109 - 36481062
Alignment:
Q  110 catataataatacattgtcctaccaactgatcaatgctcacgggacac 157  Q
    ||||||||||| |||||||||||||||||| | |||||||||| ||||    
T  36481109 catataataatgcattgtcctaccaactgagctatgctcacggaacac 36481062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 105 - 152
Target Start/End: Original strand, 41711686 - 41711733
Alignment:
Q  105 tcctacatataataatacattgtcctaccaactgatcaatgctcacgg 152  Q
    |||||||||||||||| ||||||||||||||| || | ||||||||||    
T  41711686 tcctacatataataatgcattgtcctaccaacagagctatgctcacgg 41711733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 106 - 156
Target Start/End: Original strand, 2558309 - 2558359
Alignment:
Q  106 cctacatataataatacattgtcctaccaactgatcaatgctcacgggaca 156  Q
    ||||||||||||||| |||||||||||||| ||| | || |||||||||||    
T  2558309 cctacatataataatgcattgtcctaccaattgagctattctcacgggaca 2558359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 36 - 118
Target Start/End: Complemental strand, 11837103 - 11837021
Alignment:
Q  36 aggtagtctagtggctagatttcaccttataagatgaataagtgggatgttcggagttcgaatctcaaatcctacatataata 118  Q
    |||||| |||||||||||| ||||| ||||||| |||||||||| | ||| ||| ||||||| | | |  |||||||||||||    
T  11837103 aggtagcctagtggctagaattcactttataaggtgaataagtgaggtgtccggggttcgaaccccgacccctacatataata 11837021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 44 - 154
Target Start/End: Complemental strand, 20533863 - 20533753
Alignment:
Q  44 tagtggctagatttcaccttataagatgaataagtgggatgttcggagttcgaatctcaaatcctacatataataatacattgtcctaccaactgatcaa 143  Q
    |||||| |||| || |||||||||| ||||||||||||||||  || ||||||| ||| |   || |||||||||||   |||| ||||||||||| | |    
T  20533863 tagtggttagaatttaccttataaggtgaataagtgggatgtgtggggttcgaacctcgatctctgcatataataatgttttgttctaccaactgagcta 20533764  T
Q  144 tgctcacggga 154  Q
    |||||| ||||    
T  20533763 tgctcatggga 20533753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 43 - 80
Target Start/End: Original strand, 2557571 - 2557608
Alignment:
Q  43 ctagtggctagatttcaccttataagatgaataagtgg 80  Q
    |||||||||||| ||||||||||||| |||||||||||    
T  2557571 ctagtggctagaattcaccttataaggtgaataagtgg 2557608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 110 - 155
Target Start/End: Original strand, 15690089 - 15690134
Alignment:
Q  110 catataataatacattgtcctaccaactgatcaatgctcacgggac 155  Q
    ||||||| ||| |||||||||||||||||| | |||||||||||||    
T  15690089 catataacaatgcattgtcctaccaactgagctatgctcacgggac 15690134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 56 - 97
Target Start/End: Original strand, 18424154 - 18424194
Alignment:
Q  56 ttcaccttataagatgaataagtgggatgttcggagttcgaa 97  Q
    ||||||||| |||||||||||||||||||| |||||||||||    
T  18424154 ttcacctta-aagatgaataagtgggatgtccggagttcgaa 18424194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 36 - 81
Target Start/End: Original strand, 34018051 - 34018096
Alignment:
Q  36 aggtagtctagtggctagatttcaccttataagatgaataagtggg 81  Q
    |||||| ||||||| |||| ||||||||||||| ||||||||||||    
T  34018051 aggtagcctagtggttagaattcaccttataaggtgaataagtggg 34018096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 36 - 97
Target Start/End: Complemental strand, 1244685 - 1244622
Alignment:
Q  36 aggtagtctagtggctagatttcaccttat--aagatgaataagtgggatgttcggagttcgaa 97  Q
    ||||||||||||||||||| |||||||| |  ||| |||||||||||| ||| ||| |||||||    
T  1244685 aggtagtctagtggctagaattcacctttttcaaggtgaataagtggggtgtccggggttcgaa 1244622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 37 - 69
Target Start/End: Complemental strand, 37246478 - 37246446
Alignment:
Q  37 ggtagtctagtggctagatttcaccttataaga 69  Q
    |||||||||||||||||| ||||||||||||||    
T  37246478 ggtagtctagtggctagaattcaccttataaga 37246446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 66; Significance: 4e-29; HSPs: 67)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 39 - 152
Target Start/End: Original strand, 4429466 - 4429579
Alignment:
Q  39 tagtctagtggctagatttcaccttataagatgaataagtgggatgttcggagttcgaatctcaaatcctacatataataatacattgtcctaccaactg 138  Q
    |||||||||||||||| ||||||||||||||||||||||||| |||||| | ||||||| | |||  ||| ||||||||||| |||||||||||||||||    
T  4429466 tagtctagtggctagaattcaccttataagatgaataagtggaatgttcagggttcgaaccccaacccctgcatataataatgcattgtcctaccaactg 4429565  T
Q  139 atcaatgctcacgg 152  Q
    | | ||||||||||    
T  4429566 agctatgctcacgg 4429579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 36 - 155
Target Start/End: Complemental strand, 49916554 - 49916435
Alignment:
Q  36 aggtagtctagtggctagatttcaccttataagatgaataagtgggatgttcggagttcgaatctcaaatcctacatataataatacattgtcctaccaa 135  Q
    ||||||| ||||||||||| |||||||||||| |||||||| |||||||| |||  |||||| | | |  ||||||||||||||| ||||||||||||||    
T  49916554 aggtagtttagtggctagaattcaccttataatatgaataaatgggatgtccgggattcgaaccccgacccctacatataataatgcattgtcctaccaa 49916455  T
Q  136 ctgatcaatgctcacgggac 155  Q
     ||||| |||||||||||||    
T  49916454 ttgatctatgctcacgggac 49916435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 44 - 156
Target Start/End: Original strand, 15774301 - 15774413
Alignment:
Q  44 tagtggctagatttcaccttataagatgaataagtgggatgttcggagttcgaatctcaaatcctacatataataatacattgtcctaccaactgatcaa 143  Q
    ||||||||||| ||||||||||||| |||||||||||| ||| ||| ||||||| | | |  ||||||||||||||| ||||||||||||||||||   |    
T  15774301 tagtggctagaattcaccttataaggtgaataagtggggtgtccggggttcgaaccccgacccctacatataataatgcattgtcctaccaactgagtta 15774400  T
Q  144 tgctcacgggaca 156  Q
    |||||||||||||    
T  15774401 tgctcacgggaca 15774413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 36 - 154
Target Start/End: Complemental strand, 48110643 - 48110525
Alignment:
Q  36 aggtagtctagtggctagatttcaccttataagatgaataagtgggatgttcggagttcgaatctcaaatcctacatataataatacattgtcctaccaa 135  Q
    |||||| ||||||||||||||||||||||||||||||||||||| | ||| ||  |||||||   |||  ||| ||||||||||| |||||| |||||||    
T  48110643 aggtagcctagtggctagatttcaccttataagatgaataagtgaggtgtccgaggttcgaactccaacccctgcatataataatgcattgttctaccaa 48110544  T
Q  136 ctgatcaatgctcacggga 154  Q
    |||| | | ||||||||||    
T  48110543 ctgagctacgctcacggga 48110525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 38 - 155
Target Start/End: Complemental strand, 21884687 - 21884570
Alignment:
Q  38 gtagtctagtggctagatttcaccttataagatgaataagtgggatgttcggagttcgaatctcaaatcctacatataataatacattgtcctaccaact 137  Q
    |||||||||||| |||| ||||||||||||| |||||||||||| |||  || ||||||| |||    ||| ||||||||||| |||||||||||||| |    
T  21884687 gtagtctagtggttagaattcaccttataaggtgaataagtggggtgtctggggttcgaacctcggcccctgcatataataatgcattgtcctaccaatt 21884588  T
Q  138 gatcaatgctcacgggac 155  Q
    || | |||||||||||||    
T  21884587 gagctatgctcacgggac 21884570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 36 - 155
Target Start/End: Original strand, 3532955 - 3533073
Alignment:
Q  36 aggtagtctagtggctagatttcaccttataagatgaataagtgggatgttcggagttcgaatctcaaatcctacatataataatacattgtcctaccaa 135  Q
    |||||| ||||| |||||| ||||||||||||| |||||||||||| ||| ||| ||| ||| | | |  ||||||||||||||| ||||||||||| ||    
T  3532955 aggtagcctagtagctagaattcaccttataaggtgaataagtggggtgtccggggttggaacc-cgacccctacatataataatgcattgtcctactaa 3533053  T
Q  136 ctgatcaatgctcacgggac 155  Q
    |||| | |||||||||||||    
T  3533054 ctgagctatgctcacgggac 3533073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 36 - 139
Target Start/End: Complemental strand, 15368919 - 15368816
Alignment:
Q  36 aggtagtctagtggctagatttcaccttataagatgaataagtgggatgttcggagttcgaatctcaaatcctacatataataatacattgtcctaccaa 135  Q
    |||||| |||||||||||| |||||||||||| ||||||||||||| ||| ||| ||||||| | |    ||| ||||||||||| ||||||||||||||    
T  15368919 aggtagcctagtggctagaattcaccttataaaatgaataagtggggtgtccggggttcgaaccccggcccctgcatataataatgcattgtcctaccaa 15368820  T
Q  136 ctga 139  Q
    ||||    
T  15368819 ctga 15368816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 61 - 139
Target Start/End: Complemental strand, 17889150 - 17889072
Alignment:
Q  61 cttataagatgaataagtgggatgttcggagttcgaatctcaaatcctacatataataatacattgtcctaccaactga 139  Q
    |||||||| |||||||||||||||| ||||||||||| | | | |||| |||||||||||||||| |||||||||||||    
T  17889150 cttataaggtgaataagtgggatgtccggagttcgaaccccgattcctgcatataataatacattatcctaccaactga 17889072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 47 - 157
Target Start/End: Original strand, 18923877 - 18923987
Alignment:
Q  47 tggctagatttcaccttataagatgaataagtgggatgttcggagttcgaatctcaaatcctacatataataatacattgtcctaccaactgatcaatgc 146  Q
    |||||||| ||||||||||||| |||||| ||||| ||| ||  ||||||| |   || ||| ||||||||||| |||||||||||||||||| | ||||    
T  18923877 tggctagaattcaccttataaggtgaatacgtggggtgtccgaggttcgaaccctgaaccctgcatataataatgcattgtcctaccaactgagctatgc 18923976  T
Q  147 tcacgggacac 157  Q
    |||||||||||    
T  18923977 tcacgggacac 18923987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 36 - 158
Target Start/End: Original strand, 23930525 - 23930647
Alignment:
Q  36 aggtagtctagtggctagatttcaccttataagatgaataagtgggatgttcggagttcgaatctcaaatcctacatataataatacattgtcctaccaa 135  Q
    |||||| |||||||||||| ||||| ||||||| | ||||| |||| ||| | | ||||||| | | |  ||| ||||||||||| ||||||||||||||    
T  23930525 aggtagcctagtggctagagttcactttataaggtaaataaatggggtgtccagggttcgaaccccgacccctgcatataataatgcattgtcctaccaa 23930624  T
Q  136 ctgatcaatgctcacgggacaca 158  Q
    |||| | ||||||||||||||||    
T  23930625 ctgaactatgctcacgggacaca 23930647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 43 - 156
Target Start/End: Complemental strand, 42832054 - 42831941
Alignment:
Q  43 ctagtggctagatttcaccttataagatgaataagtgggatgttcggagttcgaatctcaaatcctacatataataatacattgtcctaccaactgatca 142  Q
    |||||| ||||| ||||||||||||| |||||||||||| ||| ||| ||| ||| | ||   ||| ||||||||||| || ||||||||||||||| |     
T  42832054 ctagtgactagaattcaccttataaggtgaataagtggggtgtccggggtttgaaccccagcccctgcatataataatgcaatgtcctaccaactgagct 42831955  T
Q  143 atgctcacgggaca 156  Q
    ||||||||||||||    
T  42831954 atgctcacgggaca 42831941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 36 - 156
Target Start/End: Original strand, 4354086 - 4354206
Alignment:
Q  36 aggtagtctagtggctagatttcaccttataagatgaataagtgggatgttcggagttcgaatctcaaatcctacatataataatacattgtcctaccaa 135  Q
    |||||| || ||||||||| ||||| ||||||| |||||||||||| ||| || |||||||| | |    ||| ||||||||||| ||||||||||||||    
T  4354086 aggtagcctggtggctagaattcactttataaggtgaataagtggggtgtccgaagttcgaaccccggcccctgcatataataatgcattgtcctaccaa 4354185  T
Q  136 ctgatcaatgctcacgggaca 156  Q
    |||| | |||||||| |||||    
T  4354186 ctgagctatgctcacaggaca 4354206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 36 - 156
Target Start/End: Complemental strand, 37491004 - 37490884
Alignment:
Q  36 aggtagtctagtggctagatttcaccttataagatgaataagtgggatgttcggagttcgaatctcaaatcctacatataataatacattgtcctaccaa 135  Q
    |||||| |||||||||||| |||||||||||||||||||||| ||| ||| ||  ||||| | | |    ||| ||||||||||| ||||||||||||||    
T  37491004 aggtagcctagtggctagaattcaccttataagatgaataagcggggtgtccgtggttcgtaccccggcccctgcatataataatgcattgtcctaccaa 37490905  T
Q  136 ctgatcaatgctcacgggaca 156  Q
    ||||   ||||||||||||||    
T  37490904 ctgagttatgctcacgggaca 37490884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 36 - 156
Target Start/End: Original strand, 43555855 - 43555975
Alignment:
Q  36 aggtagtctagtggctagatttcaccttataagatgaataagtgggatgttcggagttcgaatctcaaatcctacatataataatacattgtcctaccaa 135  Q
    ||||||||||||||||||| | ||||||||||| | |||||||||| ||| | | ||| ||| | | |  ||| ||||||||||| ||||||||||||||    
T  43555855 aggtagtctagtggctagaatccaccttataaggtaaataagtggggtgtcctgggtttgaaccccgatccctgcatataataatgcattgtcctaccaa 43555954  T
Q  136 ctgatcaatgctcacgggaca 156  Q
    |||| | ||||||||| ||||    
T  43555955 ctgagctatgctcacgagaca 43555975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 36 - 156
Target Start/End: Original strand, 46116155 - 46116275
Alignment:
Q  36 aggtagtctagtggctagatttcaccttataagatgaataagtgggatgttcggagttcgaatctcaaatcctacatataataatacattgtcctaccaa 135  Q
    |||||| ||||||| |||| ||||||||||||| ||||||| |||| ||| ||| ||||||| | ||   ||| ||||| ||||| ||||||||||||||    
T  46116155 aggtagcctagtggttagaattcaccttataaggtgaataattggggtgtccggggttcgaaccccagcccctgcatatgataatgcattgtcctaccaa 46116254  T
Q  136 ctgatcaatgctcacgggaca 156  Q
    || | | ||||||||||||||    
T  46116255 ctaagctatgctcacgggaca 46116275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 36 - 139
Target Start/End: Complemental strand, 19793640 - 19793537
Alignment:
Q  36 aggtagtctagtggctagatttcaccttataagatgaataagtgggatgttcggagttcgaatctcaaatcctacatataataatacattgtcctaccaa 135  Q
    |||||| ||||||| |||| ||||||||||||| |||||||||||| ||| ||| ||||||||  |    ||| ||||||||||| ||||||||||||||    
T  19793640 aggtagcctagtggttagaattcaccttataaggtgaataagtggggtgtccggggttcgaattccggcccctgcatataataatgcattgtcctaccaa 19793541  T
Q  136 ctga 139  Q
    ||||    
T  19793540 ctga 19793537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 36 - 155
Target Start/End: Complemental strand, 24662096 - 24661977
Alignment:
Q  36 aggtagtctagtggctagatttcaccttataagatgaataagtgggatgttcggagttcgaatctcaaatcctacatataataatacattgtcctaccaa 135  Q
    |||||||  |||||||||| ||||||||||||| ||||||| |||| |||  || |||||||||   |  ||| ||||||||||| ||||||||||||||    
T  24662096 aggtagttcagtggctagaattcaccttataagttgaataaatggggtgtctggggttcgaatcctgacccctgcatataataatgcattgtcctaccaa 24661997  T
Q  136 ctgatcaatgctcacgggac 155  Q
     ||| | |||||||||||||    
T  24661996 ttgagctatgctcacgggac 24661977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 46 - 157
Target Start/End: Complemental strand, 30649197 - 30649086
Alignment:
Q  46 gtggctagatttcaccttataagatgaataagtgggatgttcggagttcgaatctcaaatcctacatataataatacattgtcctaccaactgatcaatg 145  Q
    ||||||||| ||||| ||||||| |||||||||||| |||  || ||||||| | ||| |||| ||||||||||| | |||||||| ||||||| |  ||    
T  30649197 gtggctagaattcacgttataaggtgaataagtggggtgtctggggttcgaaccccaactcctgcatataataatgcgttgtcctatcaactgagctttg 30649098  T
Q  146 ctcacgggacac 157  Q
    ||||||||||||    
T  30649097 ctcacgggacac 30649086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 43 - 158
Target Start/End: Complemental strand, 39434725 - 39434610
Alignment:
Q  43 ctagtggctagatttcaccttataagatgaataagtgggatgttcggagttcgaatctcaaatcctacatataataatacattgtcctaccaactgatca 142  Q
    |||||||| ||| ||||||||||||| |||||||||||| ||| ||  |||||||  ||   |||||||||||| ||| ||||||| |||||||||| |     
T  39434725 ctagtggcaagaattcaccttataaggtgaataagtggggtgtccgaggttcgaacatcggctcctacatataacaatgcattgtcataccaactgaact 39434626  T
Q  143 atgctcacgggacaca 158  Q
    ||||||| ||||||||    
T  39434625 atgctcatgggacaca 39434610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 72 - 155
Target Start/End: Original strand, 49010717 - 49010800
Alignment:
Q  72 aataagtgggatgttcggagttcgaatctcaaatcctacatataataatacattgtcctaccaactgatcaatgctcacgggac 155  Q
    |||||||| |||||||| | |||||| | ||| || | |||||||||||||||||||||||||||||| | |||||||||||||    
T  49010717 aataagtgagatgttcgaaattcgaaccccaactcatgcatataataatacattgtcctaccaactgagctatgctcacgggac 49010800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 36 - 153
Target Start/End: Complemental strand, 9527540 - 9527422
Alignment:
Q  36 aggtagtctagtggctagatttcaccttataagatgaataagtgggatgttcggagttcgaatctcaaatcctacatataataatacattgt-cctacca 134  Q
    ||||||||||||||||||| |||||||||||||||||||||||||| ||| | | |||| || | | |  ||| ||||||| ||| |||||| ||| |||    
T  9527540 aggtagtctagtggctagaattcaccttataagatgaataagtggggtgtccagggttcaaaccccgacccctgcatataacaatgcattgtccctgcca 9527441  T
Q  135 actgatcaatgctcacggg 153  Q
    ||||| | |||||||||||    
T  9527440 actgagctatgctcacggg 9527422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 36 - 156
Target Start/End: Original strand, 538310 - 538430
Alignment:
Q  36 aggtagtctagtggctagatttcaccttataagatgaataagtgggatgttcggagttcgaatctcaaatcctacatataataatacattgtcctaccaa 135  Q
    |||||| ||| || ||||| |||| |||||||| |||||||||||| ||||||| |||||||   |    ||| ||||||||||| |||||| |||||||    
T  538310 aggtagcctattgtctagaattcatcttataaggtgaataagtggggtgttcggggttcgaactccggcccctgcatataataatgcattgttctaccaa 538409  T
Q  136 ctgatcaatgctcacgggaca 156  Q
    |||| | ||||||||||||||    
T  538410 ctgaactatgctcacgggaca 538430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 36 - 156
Target Start/End: Complemental strand, 27745271 - 27745151
Alignment:
Q  36 aggtagtctagtggctagatttcaccttataagatgaataagtgggatgttcggagttcgaatctcaaatcctacatataataatacattgtcctaccaa 135  Q
    ||||||| |||||||||||  |||| ||||||| ||||||| |||| ||| ||| ||||||| | | |  ||| ||||||||||| |||| |||||||||    
T  27745271 aggtagtttagtggctagaactcactttataaggtgaataaatggggtgtccggggttcgaaccccgatccctgcatataataatgcattttcctaccaa 27745172  T
Q  136 ctgatcaatgctcacgggaca 156  Q
     ||| | ||||||||||||||    
T  27745171 atgagctatgctcacgggaca 27745151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 36 - 156
Target Start/End: Original strand, 34560319 - 34560438
Alignment:
Q  36 aggtagtctagtggctagatttcaccttataagatgaataagtgggatgttcggagttcgaatctcaaatcctacatataataatacattgtcctaccaa 135  Q
    ||||||||||||| ||||| ||||||||||||| |||||||||||| ||| ||  ||||||| ||  |  | ||||||||||||| |||| |||||||||    
T  34560319 aggtagtctagtgactagaattcaccttataaggtgaataagtggggtgtccgaggttcgaacct-gacccatacatataataatgcattatcctaccaa 34560417  T
Q  136 ctgatcaatgctcacgggaca 156  Q
    |||| | |  |||||||||||    
T  34560418 ctgagctaaactcacgggaca 34560438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 43 - 159
Target Start/End: Original strand, 49251383 - 49251499
Alignment:
Q  43 ctagtggctagatttcaccttataagatgaataagtgggatgttcggagttcgaatctcaaatcctacatataataatacattgtcctaccaactgatca 142  Q
    ||||||| |||| ||||| ||||||| |||||||||||| |||  || ||||||| | | |  ||| ||||||||||| ||||||||||||||||||       
T  49251383 ctagtggttagaattcacattataaggtgaataagtggggtgtctggggttcgaaccccgacccctgcatataataatgcattgtcctaccaactgagtt 49251482  T
Q  143 atgctcacgggacacat 159  Q
    |||||||| ||||||||    
T  49251483 atgctcacaggacacat 49251499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 56 - 135
Target Start/End: Original strand, 35840110 - 35840189
Alignment:
Q  56 ttcaccttataagatgaataagtgggatgttcggagttcgaatctcaaatcctacatataataatacattgtcctaccaa 135  Q
    ||||||||||||||||||||||||   |||||||| |||||| ||| | |||| |||||||||||| |||||||| ||||    
T  35840110 ttcaccttataagatgaataagtgaagtgttcggaattcgaacctcgactcctgcatataataatatattgtcctgccaa 35840189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 36 - 139
Target Start/End: Complemental strand, 37733869 - 37733766
Alignment:
Q  36 aggtagtctagtggctagatttcaccttataagatgaataagtgggatgttcggagttcgaatctcaaatcctacatataataatacattgtcctaccaa 135  Q
    |||||| ||||||| |||| ||||||||||||| |||||||||||| ||| ||| ||||||| | |     || ||||||||||| ||||||||||||||    
T  37733869 aggtagcctagtggttagaattcaccttataaggtgaataagtggggtgtccggggttcgaaccccgtccactgcatataataatgcattgtcctaccaa 37733770  T
Q  136 ctga 139  Q
    ||||    
T  37733769 ctga 37733766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 43 - 158
Target Start/End: Complemental strand, 39433465 - 39433350
Alignment:
Q  43 ctagtggctagatttcaccttataagatgaataagtgggatgttcggagttcgaatctcaaatcctacatataataatacattgtcctaccaactgatca 142  Q
    |||||||||||| ||||||||||||| |||||||||||| ||| ||  |||||||  ||    ||| ||||||||||| |||| || |||||||||| |     
T  39433465 ctagtggctagaattcaccttataaggtgaataagtggggtgtccgaggttcgaacatcggcccctgcatataataatgcattttcataccaactgaact 39433366  T
Q  143 atgctcacgggacaca 158  Q
    ||||||| ||||||||    
T  39433365 atgctcatgggacaca 39433350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 49 - 135
Target Start/End: Original strand, 8865171 - 8865257
Alignment:
Q  49 gctagatttcaccttataagatgaataagtgggatgttcggagttcgaatctcaaatcctacatataataatacattgtcctaccaa 135  Q
    |||||| ||||||||||||||| |||||||||| ||||| | ||||||| |||||  | | ||||||||||| |||| |||||||||    
T  8865171 gctagaattcaccttataagataaataagtggggtgttctgggttcgaacctcaatccttgcatataataatgcattatcctaccaa 8865257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 39 - 157
Target Start/End: Original strand, 29331148 - 29331266
Alignment:
Q  39 tagtctagtggctagatttcaccttataagatgaataagtgggatgttcggagttcgaatctcaaatcctacatataataatacattgtcctaccaactg 138  Q
    |||| ||||||||||| ||||||||||||  | ||||| | || ||| ||  ||||||||| |  | ||| ||||||||||| ||||||||||||||||     
T  29331148 tagtttagtggctagaattcaccttataatgtaaataaatagggtgtccgaggttcgaatcccggaccctgcatataataatgcattgtcctaccaacta 29331247  T
Q  139 atcaatgctcacgggacac 157  Q
    | | |||||||||||||||    
T  29331248 agctatgctcacgggacac 29331266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 38 - 139
Target Start/End: Original strand, 11802003 - 11802104
Alignment:
Q  38 gtagtctagtggctagatttcaccttataagatgaataagtgggatgttcggagttcgaatctcaaatcctacatataataatacattgtcctaccaact 137  Q
    ||||||||||| ||||| || |||||||||  ||||||| ||   ||| ||| ||||||| | |||  ||||||||||||||| ||||||||||||||||    
T  11802003 gtagtctagtgactagaatttaccttataacgtgaataaatgaagtgtccggggttcgaaccccaacccctacatataataatgcattgtcctaccaact 11802102  T
Q  138 ga 139  Q
    ||    
T  11802103 ga 11802104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 39 - 155
Target Start/End: Original strand, 49606681 - 49606798
Alignment:
Q  39 tagtctagtggctagatttcacc-ttataagatgaataagtgggatgttcggagttcgaatctcaaatcctacatataataatacattgtcctaccaact 137  Q
    |||||||||||||| | |||||| ||||||| |||||||||||| ||| || ||||||||   |    ||||||||||||||| |||||||||| |||||    
T  49606681 tagtctagtggctaaaattcacccttataagctgaataagtggggtgtccgaagttcgaactccggcccctacatataataatgcattgtcctaacaact 49606780  T
Q  138 gatcaatgctcacgggac 155  Q
    || | ||||| |||||||    
T  49606781 gagctatgcttacgggac 49606798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 48 - 152
Target Start/End: Original strand, 749580 - 749683
Alignment:
Q  48 ggctagatttcaccttataagatgaataagtgggatgttcggagttcgaatctcaaatcctacatataataatacattgtcctaccaactgatcaatgct 147  Q
    ||||||| |||| |||||||| |||||||||||| ||| ||| ||||||| | |||  ||||||||||||||| |||||| | |||||||||   |||||    
T  749580 ggctagaattcatcttataaggtgaataagtggggtgt-cggggttcgaaccccaacccctacatataataatgcattgttcgaccaactgagttatgct 749678  T
Q  148 cacgg 152  Q
    |||||    
T  749679 cacgg 749683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 36 - 139
Target Start/End: Original strand, 8364389 - 8364492
Alignment:
Q  36 aggtagtctagtggctagatttcaccttataagatgaataagtgggatgttcggagttcgaatctcaaatcc-tacatataataatacattgtcctacca 134  Q
    |||||| |||||| ||||| ||||||||| ||| ||||||||||||  |||||| ||||||| |||  | || ||||||||||||| |||| ||||||||    
T  8364389 aggtagcctagtgactagaattcaccttaaaaggtgaataagtggggcgttcggggttcgaa-ctccgacccatacatataataatgcattttcctacca 8364487  T
Q  135 actga 139  Q
    |||||    
T  8364488 actga 8364492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 39 - 155
Target Start/End: Original strand, 12073061 - 12073177
Alignment:
Q  39 tagtctagtggctagatttcaccttataagatgaataagtgggatgttcggagttcgaatctcaaatcctacatataataatacattgtcctaccaactg 138  Q
    ||||||||||| |||| || || ||||||| ||||||| | || ||| ||||||||||| ||| |  | || |||||||||| |||| ||||||||||||    
T  12073061 tagtctagtggttagaatttactttataaggtgaataaattgggtgtccggagttcgaacctcgatccttagatataataatgcattatcctaccaactg 12073160  T
Q  139 atcaatgctcacgggac 155  Q
    |   |||||||||||||    
T  12073161 agttatgctcacgggac 12073177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 43 - 155
Target Start/End: Complemental strand, 20357566 - 20357455
Alignment:
Q  43 ctagtggctagatttcaccttataagatgaataagtgggatgttcggagttcgaatctcaaatcctacatataataatacattgtcctaccaactgatca 142  Q
    ||||||| |||| ||||||||||||| |||||||||  | ||| ||| ||||||| | ||   ||| ||||||||||| ||||||||||||||||||       
T  20357566 ctagtggttagaattcaccttataaggtgaataagttagttgtccgg-gttcgaaccccagcccctgcatataataatgcattgtcctaccaactgagtt 20357468  T
Q  143 atgctcacgggac 155  Q
    |||||||||||||    
T  20357467 atgctcacgggac 20357455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 43 - 155
Target Start/End: Original strand, 20562389 - 20562500
Alignment:
Q  43 ctagtggctagatttcaccttataagatgaataagtgggatgttcggagttcgaatctcaaatcctacatataataatacattgtcctaccaactgatca 142  Q
    ||||||| |||| ||||||||||||| |||||||||  | ||| ||| ||||||| | ||   ||| ||||||||||| ||||||||||||||||||       
T  20562389 ctagtggttagaattcaccttataaggtgaataagttagttgtccgg-gttcgaaccccagcccctgcatataataatgcattgtcctaccaactgagtt 20562487  T
Q  143 atgctcacgggac 155  Q
    |||||||||||||    
T  20562488 atgctcacgggac 20562500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 36 - 152
Target Start/End: Complemental strand, 22346533 - 22346418
Alignment:
Q  36 aggtagtctagtggctagatttcaccttataagatgaataagtgggatgttcggagttcgaatctcaaatcctacatataataatacattgtcctaccaa 135  Q
    |||||| |||||||||||| ||||||||||||| ||||||| |||| ||||| | ||||||| | | |  ||| | |||||||||  |||||||||||||    
T  22346533 aggtagcctagtggctagagttcaccttataaggtgaataaatggggtgttcagggttcgaa-cccgacccctgcttataataatgtattgtcctaccaa 22346435  T
Q  136 ctgatcaatgctcacgg 152  Q
    || | | ||||||||||    
T  22346434 cttagctatgctcacgg 22346418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 39 - 139
Target Start/End: Original strand, 23345041 - 23345139
Alignment:
Q  39 tagtctagtggctagatttcaccttataagatgaataagtgggatgttcggagttcgaatctcaaatcctacatataataatacattgtcctaccaactg 138  Q
    |||||||||||||||| ||||||||||||| |||||||||||  |||| |||||||||| | |    ||| ||||||| ||| |||||||||||||||||    
T  23345041 tagtctagtggctagaattcaccttataaggtgaataagtggagtgtt-ggagttcgaa-cccggcccctgcatataacaatgcattgtcctaccaactg 23345138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 48 - 156
Target Start/End: Original strand, 23463979 - 23464087
Alignment:
Q  48 ggctagatttcaccttataagatgaataagtgggatgttcggagttcgaatctcaaatcctacatataataatacattgtcctaccaactgatcaatgct 147  Q
    ||||||| ||||||||||||  |||| ||||||| ||| ||| ||||||| | |    ||| ||||||||||| |||||||||||||||||| | |||||    
T  23463979 ggctagaattcaccttataaagtgaacaagtggggtgtccggggttcgaaccccggcccctgcatataataatgcattgtcctaccaactgaactatgct 23464078  T
Q  148 cacgggaca 156  Q
    || ||||||    
T  23464079 catgggaca 23464087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 105 - 153
Target Start/End: Original strand, 29442017 - 29442065
Alignment:
Q  105 tcctacatataataatacattgtcctaccaactgatcaatgctcacggg 153  Q
    |||||||||||||||| |||||||||||||||||| | |||||||||||    
T  29442017 tcctacatataataatgcattgtcctaccaactgagctatgctcacggg 29442065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 36 - 155
Target Start/End: Original strand, 38019928 - 38020048
Alignment:
Q  36 aggtagtctagtggctagatttcaccttataagatgaataagtgggatgttcggagtt-cgaatctcaaatcctacatataataatacattgtcctacca 134  Q
    |||||| |||||||||||| ||||| ||||||| |||||||||||| |||  || ||| ||||   |    ||| ||||||||||| |||||||||||||    
T  38019928 aggtagcctagtggctagaattcactttataaggtgaataagtggggtgtctggggtttcgaactccggcccctgcatataataatgcattgtcctacca 38020027  T
Q  135 actgatcaatgctcacgggac 155  Q
    ||||| | |||||||||||||    
T  38020028 actgagctatgctcacgggac 38020048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 36 - 99
Target Start/End: Original strand, 5485487 - 5485550
Alignment:
Q  36 aggtagtctagtggctagatttcaccttataagatgaataagtgggatgttcggagttcgaatc 99  Q
    ||||||| ||||||||| | ||||| ||||||| ||||||||| || |||||||||||||||||    
T  5485487 aggtagtttagtggctataattcacgttataaggtgaataagtaggttgttcggagttcgaatc 5485550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 36 - 139
Target Start/End: Original strand, 16110001 - 16110104
Alignment:
Q  36 aggtagtctagtggctagatttcaccttataagatgaataagtgggatgttcggagttcgaatctcaaatcctacatataataatacattgtcctaccaa 135  Q
    |||||||||||| | |||| ||||| |||||  ||||||||||||  | || || ||||||| |||||  ||| ||||||||||| |||||||||| |||    
T  16110001 aggtagtctagttgttagaattcactttatagaatgaataagtggagtctttggggttcgaacctcaacccctgcatataataatgcattgtcctatcaa 16110100  T
Q  136 ctga 139  Q
    ||||    
T  16110101 ctga 16110104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 36 - 139
Target Start/End: Original strand, 17064248 - 17064351
Alignment:
Q  36 aggtagtctagtggctagatttcaccttataagatgaataagtgggatgttcggagttcgaatctcaaatcctacatataataatacattgtcctaccaa 135  Q
    |||||| ||| ||| |||| ||||||||||||  |||||||||||| |||  |  ||||||| ||||| | |||||||||||||| |||||| | |||||    
T  17064248 aggtagcctaatggatagaattcaccttataacgtgaataagtggggtgtcagtggttcgaacctcaacttctacatataataatgcattgtacaaccaa 17064347  T
Q  136 ctga 139  Q
    ||||    
T  17064348 ctga 17064351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 36 - 139
Target Start/End: Complemental strand, 24636838 - 24636735
Alignment:
Q  36 aggtagtctagtggctagatttcaccttataagatgaataagtgggatgttcggagttcgaatctcaaatcctacatataataatacattgtcctaccaa 135  Q
    |||||||||| |||||||| || ||||||| || |||||||||| | ||| |||||||||||   |   ||||||||||||||||  |||||| ||||||    
T  24636838 aggtagtctaatggctagaatttaccttatcaggtgaataagtgaggtgtccggagttcgaactccggctcctacatataataatgtattgtcataccaa 24636739  T
Q  136 ctga 139  Q
    ||||    
T  24636738 ctga 24636735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 36 - 122
Target Start/End: Complemental strand, 4616987 - 4616901
Alignment:
Q  36 aggtagtctagtggctagatttcaccttataagatgaataagtgggatgttcggagttcgaatctcaaatcctacatataataatac 122  Q
    ||||||||||||||||||| ||||| ||||||| |||||||||||| |||  |  ||||||| | | |  |||||||||||||||||    
T  4616987 aggtagtctagtggctagaattcactttataaggtgaataagtggggtgtctgtggttcgaaccgcgacccctacatataataatac 4616901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 39 - 81
Target Start/End: Original strand, 32711128 - 32711170
Alignment:
Q  39 tagtctagtggctagatttcaccttataagatgaataagtggg 81  Q
    |||||||||||||||| ||||||||||||| ||||||||||||    
T  32711128 tagtctagtggctagaattcaccttataaggtgaataagtggg 32711170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 36 - 98
Target Start/End: Complemental strand, 35593877 - 35593815
Alignment:
Q  36 aggtagtctagtggctagatttcaccttataagatgaataagtgggatgttcggagttcgaat 98  Q
    |||||| |||| ||||||| ||||||||||||| |||||||||||| ||| ||| ||||||||    
T  35593877 aggtagcctagcggctagaattcaccttataaggtgaataagtggggtgtccggggttcgaat 35593815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 43 - 85
Target Start/End: Original strand, 39994836 - 39994878
Alignment:
Q  43 ctagtggctagatttcaccttataagatgaataagtgggatgt 85  Q
    |||||||||||| ||||||||||||| ||||||||||||||||    
T  39994836 ctagtggctagaattcaccttataaggtgaataagtgggatgt 39994878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 44 - 134
Target Start/End: Complemental strand, 44803333 - 44803243
Alignment:
Q  44 tagtggctagatttcaccttataagatgaataagtgggatgttcggagttcgaatctcaaatcctacatataataatacattgtcctacca 134  Q
    ||||||||||| |||| |||||||||||||||||| || ||| ||| |||||||   ||   || |||||||||||| |||||||||||||    
T  44803333 tagtggctagaattcatcttataagatgaataagtagggtgtacggggttcgaactccagccccaacatataataatgcattgtcctacca 44803243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 44 - 97
Target Start/End: Complemental strand, 11405562 - 11405509
Alignment:
Q  44 tagtggctagatttcaccttataagatgaataagtgggatgttcggagttcgaa 97  Q
    ||||||||||| ||||||||||||| |||||||||||| ||| ||| |||||||    
T  11405562 tagtggctagaattcaccttataaggtgaataagtggggtgtccggggttcgaa 11405509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 36 - 89
Target Start/End: Original strand, 30632365 - 30632418
Alignment:
Q  36 aggtagtctagtggctagatttcaccttataagatgaataagtgggatgttcgg 89  Q
    ||||||||| |||| |||| |||||||||||||||||||||||| | |||||||    
T  30632365 aggtagtctggtggttagaattcaccttataagatgaataagtgtggtgttcgg 30632418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 36 - 97
Target Start/End: Original strand, 47939180 - 47939241
Alignment:
Q  36 aggtagtctagtggctagatttcaccttataagatgaataagtgggatgttcggagttcgaa 97  Q
    |||||| ||||||| |||| ||||||| ||||| |||||||||||| ||| |||||||||||    
T  47939180 aggtagcctagtggttagaattcacctaataaggtgaataagtggggtgtccggagttcgaa 47939241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 49 - 97
Target Start/End: Complemental strand, 1031688 - 1031640
Alignment:
Q  49 gctagatttcaccttataagatgaataagtgggatgttcggagttcgaa 97  Q
    |||||| ||||||||||||| |||||||||||| ||||||| |||||||    
T  1031688 gctagaattcaccttataaggtgaataagtggggtgttcggggttcgaa 1031640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 36 - 139
Target Start/End: Original strand, 17871062 - 17871163
Alignment:
Q  36 aggtagtctagtggctagatttcaccttataagatgaataagtgggatgttcggagttcgaatctcaaatcctacatataataatacattgtcctaccaa 135  Q
    |||||||||||||| || | ||||||||| | ||||||||||| || ||||||| ||||||| | |    ||| ||||||||||| |||||||||| |||    
T  17871062 aggtagtctagtggataaaattcaccttacatgatgaataagtagggtgttcggggttcgaacccc--gccctgcatataataatgcattgtcctatcaa 17871159  T
Q  136 ctga 139  Q
    ||||    
T  17871160 ctga 17871163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 49 - 97
Target Start/End: Complemental strand, 35176297 - 35176249
Alignment:
Q  49 gctagatttcaccttataagatgaataagtgggatgttcggagttcgaa 97  Q
    |||||| |||||||| |||||| ||||||||||||||| ||||||||||    
T  35176297 gctagaattcaccttttaagataaataagtgggatgtttggagttcgaa 35176249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 39 - 155
Target Start/End: Original strand, 40814750 - 40814866
Alignment:
Q  39 tagtctagtggctagatttcaccttataagatgaataagtgggatgttcggagttcgaatctcaaatcctacatataataatacattgtcctaccaactg 138  Q
    |||||||||||||||| || |||||||||| |||  ||| ||| ||| |||  |||||| | | |  ||| ||||||||||| ||||||| ||| |||||    
T  40814750 tagtctagtggctagaatttaccttataaggtgagcaagcggggtgtccgggtttcgaaccccgacccctgcatataataatgcattgtcttactaactg 40814849  T
Q  139 atcaatgctcacgggac 155  Q
    | | |||||||||||||    
T  40814850 agctatgctcacgggac 40814866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 114 - 157
Target Start/End: Original strand, 9408673 - 9408716
Alignment:
Q  114 taataatacattgtcctaccaactgatcaatgctcacgggacac 157  Q
    ||||||| |||||||||||||||||| | |||||||||||||||    
T  9408673 taataatgcattgtcctaccaactgagctatgctcacgggacac 9408716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 110 - 156
Target Start/End: Original strand, 5172657 - 5172703
Alignment:
Q  110 catataataatacattgtcctaccaactgatcaatgctcacgggaca 156  Q
    ||||||||||| |||||||||| ||||||| | ||||||||||||||    
T  5172657 catataataatgcattgtcctatcaactgagctatgctcacgggaca 5172703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 39 - 81
Target Start/End: Original strand, 9590329 - 9590371
Alignment:
Q  39 tagtctagtggctagatttcaccttataagatgaataagtggg 81  Q
    ||||||||||| |||| ||||||||||||||| ||||||||||    
T  9590329 tagtctagtggttagaattcaccttataagataaataagtggg 9590371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 44 - 78
Target Start/End: Complemental strand, 12866230 - 12866196
Alignment:
Q  44 tagtggctagatttcaccttataagatgaataagt 78  Q
    ||||||||||| |||||||||||||||||||||||    
T  12866230 tagtggctagaattcaccttataagatgaataagt 12866196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 44 - 137
Target Start/End: Complemental strand, 36164769 - 36164675
Alignment:
Q  44 tagtggctagatttcaccttataagatgaataagtggga-tgttcggagttcgaatctcaaatcctacatataataatacattgtcctaccaact 137  Q
    |||||| |||| |||| |||||||||||||||| ||||  | ||||| ||||||| | |||  | ||||||||||||| |||| |||||||||||    
T  36164769 tagtggttagaattcatcttataagatgaataactgggggtattcggggttcgaaccccaacccttacatataataatgcattatcctaccaact 36164675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 106 - 152
Target Start/End: Complemental strand, 38851679 - 38851633
Alignment:
Q  106 cctacatataataatacattgtcctaccaactgatcaatgctcacgg 152  Q
    ||||||||||||||| |||||||||||||||||| | || |||||||    
T  38851679 cctacatataataatgcattgtcctaccaactgagctattctcacgg 38851633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 36 - 139
Target Start/End: Original strand, 11213430 - 11213533
Alignment:
Q  36 aggtagtctagtggctagatttcaccttataagatgaataagtgggatgttcggagttcgaatctcaaatc-ctacatataataatacattgtcctacca 134  Q
    |||||||||| || ||||| ||||||||||||  | |||||||||| ||| ||| ||||||| ||| || | ||||||||||||||  |||||  |||||    
T  11213430 aggtagtctattgactagaattcaccttataaagtaaataagtggggtgtccggggttcgaa-ctccaacctctacatataataatgtattgttttacca 11213528  T
Q  135 actga 139  Q
    |||||    
T  11213529 actga 11213533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 36 - 80
Target Start/End: Original strand, 11907280 - 11907324
Alignment:
Q  36 aggtagtctagtggctagatttcaccttataagatgaataagtgg 80  Q
    |||||| ||||||| |||| |||||||||||| ||||||||||||    
T  11907280 aggtagcctagtggttagaattcaccttataatatgaataagtgg 11907324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 36 - 97
Target Start/End: Complemental strand, 41677176 - 41677113
Alignment:
Q  36 aggtagtctagtggctagatttcaccttat--aagatgaataagtgggatgttcggagttcgaa 97  Q
    |||||| |||||||||||| |||||||| |  ||| |||||||||||| ||| |||||||||||    
T  41677176 aggtagcctagtggctagaattcacctttttcaaggtgaataagtggggtgtccggagttcgaa 41677113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 61; Significance: 4e-26; HSPs: 68)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 43 - 155
Target Start/End: Original strand, 43468693 - 43468805
Alignment:
Q  43 ctagtggctagatttcaccttataagatgaataagtgggatgttcggagttcgaatctcaaatcctacatataataatacattgtcctaccaactgatca 142  Q
    |||||||||||| ||||||||||||| |||||||||||| ||| ||||||||||| | | |  ||||||||||| ||| |||||||||||||||||| |     
T  43468693 ctagtggctagaattcaccttataaggtgaataagtggggtgtccggagttcgaaccccgacccctacatataacaatgcattgtcctaccaactgagct 43468792  T
Q  143 atgctcacgggac 155  Q
    |||||||||||||    
T  43468793 atgctcacgggac 43468805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 36 - 156
Target Start/End: Original strand, 34073220 - 34073340
Alignment:
Q  36 aggtagtctagtggctagatttcaccttataagatgaataagtgggatgttcggagttcgaatctcaaatcctacatataataatacattgtcctaccaa 135  Q
    ||||||||| ||||||||| ||||||||||||| |||||||||||| ||| ||| ||||||| ||  |  ||||||||||||||| |||| |||||||||    
T  34073220 aggtagtctcgtggctagaattcaccttataaggtgaataagtggggtgtccggggttcgaaccttgacccctacatataataatgcattatcctaccaa 34073319  T
Q  136 ctgatcaatgctcacgggaca 156  Q
    |||| | | ||||||||||||    
T  34073320 ctgaactacgctcacgggaca 34073340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 46 - 156
Target Start/End: Complemental strand, 42688160 - 42688050
Alignment:
Q  46 gtggctagatttcaccttataagatgaataagtgggatgttcggagttcgaatctcaaatcctacatataataatacattgtcctaccaactgatcaatg 145  Q
    |||| |||| ||||||||||||| | |||||||||| ||||||| ||||||||| | |  ||||||||||||||| |||||||||||||||||| | |||    
T  42688160 gtggttagaattcaccttataaggtaaataagtggggtgttcggggttcgaatcccgacccctacatataataatgcattgtcctaccaactgaactatg 42688061  T
Q  146 ctcacgggaca 156  Q
    |||||| ||||    
T  42688060 ctcacgagaca 42688050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 36 - 156
Target Start/End: Complemental strand, 7649642 - 7649523
Alignment:
Q  36 aggtagtctagtggctagatttcaccttataagatgaataagtgggatgttcggagttcgaatctcaaatcctacatataataatacattgtcctaccaa 135  Q
    |||||| |||||||||||| |||||||| |||| |||||||||||| ||||||  ||||||| | ||   ||||||||||||||| ||||||||||||||    
T  7649642 aggtagcctagtggctagaattcaccttgtaaggtgaataagtggggtgttcgaggttcgaaccccagc-cctacatataataatgcattgtcctaccaa 7649544  T
Q  136 ctgatcaatgctcacgggaca 156  Q
     ||| | ||||||||||||||    
T  7649543 gtgagctatgctcacgggaca 7649523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 44 - 139
Target Start/End: Original strand, 8740645 - 8740740
Alignment:
Q  44 tagtggctagatttcaccttataagatgaataagtgggatgttcggagttcgaatctcaaatcctacatataataatacattgtcctaccaactga 139  Q
    ||||||||||| ||||||||||||||||||||||| || ||| ||||||||||| ||||   ||| ||||||||| | ||||||||||||||||||    
T  8740645 tagtggctagaattcaccttataagatgaataagtagggtgtccggagttcgaacctcagcccctgcatataatactgcattgtcctaccaactga 8740740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 36 - 139
Target Start/End: Complemental strand, 24074620 - 24074517
Alignment:
Q  36 aggtagtctagtggctagatttcaccttataagatgaataagtgggatgttcggagttcgaatctcaaatcctacatataataatacattgtcctaccaa 135  Q
    |||||| |||||||||||| ||||||||||||| |||||||||| | ||| ||  |||||||  ||||  ||||||||||||||| ||||||||||||||    
T  24074620 aggtagcctagtggctagaattcaccttataaggtgaataagtgaggtgtccgaggttcgaacttcaacccctacatataataatgcattgtcctaccaa 24074521  T
Q  136 ctga 139  Q
    ||||    
T  24074520 ctga 24074517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 36 - 134
Target Start/End: Original strand, 10184782 - 10184880
Alignment:
Q  36 aggtagtctagtggctagatttcaccttataagatgaataagtgggatgttcggagttcgaatctcaaatcctacatataataatacattgtcctacca 134  Q
    |||||||||| |||||||| ||||||||||||| ||||||| |||  ||| ||||||||||| ||||   ||||||||||||||| |||||||||||||    
T  10184782 aggtagtctaatggctagaattcaccttataaggtgaataaatggagtgtccggagttcgaacctcagtccctacatataataatgcattgtcctacca 10184880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 39 - 156
Target Start/End: Complemental strand, 31373431 - 31373314
Alignment:
Q  39 tagtctagtggctagatttcaccttataagatgaataagtgggatgttcggagttcgaatctcaaatcctacatataataatacattgtcctaccaactg 138  Q
    |||||||||||||||| ||||||||||||| ||||||  |||||||| |||  |||||| |||    |||||||||||||||  | ||||||||||||||    
T  31373431 tagtctagtggctagaattcaccttataaggtgaatatatgggatgtccgggattcgaacctctgcccctacatataataatgtaatgtcctaccaactg 31373332  T
Q  139 atcaatgctcacgggaca 156  Q
    | | ||||||||||||||    
T  31373331 agctatgctcacgggaca 31373314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 36 - 156
Target Start/End: Original strand, 4798522 - 4798642
Alignment:
Q  36 aggtagtctagtggctagatttcaccttataagatgaataagtgggatgttcggagttcgaatctcaaatcctacatataataatacattgtcctaccaa 135  Q
    ||||||||||||||||||| ||||||||| ||| |||||||||||| ||| ||| ||||||| | |    ||| ||||||||||| |||| |||||||||    
T  4798522 aggtagtctagtggctagaattcaccttacaaggtgaataagtggggtgtccggggttcgaaccccggcccctgcatataataatgcattatcctaccaa 4798621  T
Q  136 ctgatcaatgctcacgggaca 156  Q
    |||| | || |||||||||||    
T  4798622 ctgagctatactcacgggaca 4798642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 44 - 155
Target Start/End: Original strand, 15042354 - 15042465
Alignment:
Q  44 tagtggctagatttcaccttataagatgaataagtgggatgttcggagttcgaatctcaaatcctacatataataatacattgtcctaccaactgatcaa 143  Q
    |||||| |||| ||||||||||||| |||||||||||| ||| ||| ||||||| | |    ||| ||||||||||| |||||||||||||||||| | |    
T  15042354 tagtggttagaattcaccttataaggtgaataagtggggtgtccggggttcgaaccccggcccctgcatataataatgcattgtcctaccaactgagcta 15042453  T
Q  144 tgctcacgggac 155  Q
    ||||||||||||    
T  15042454 tgctcacgggac 15042465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 36 - 155
Target Start/End: Complemental strand, 25119322 - 25119203
Alignment:
Q  36 aggtagtctagtggctagatttcaccttataagatgaataagtgggatgttcggagttcgaatctcaaatcctacatataataatacattgtcctaccaa 135  Q
    ||||||| ||||||||||| || || ||| ||| ||||| |||||||||| ||| ||||||| | |||  ||| ||||||||||| ||||||||||||||    
T  25119322 aggtagtttagtggctagaatttacattacaaggtgaatgagtgggatgtccggggttcgaaccccaacccctgcatataataatgcattgtcctaccaa 25119223  T
Q  136 ctgatcaatgctcacgggac 155  Q
     ||| | |||||||||||||    
T  25119222 ttgaactatgctcacgggac 25119203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 44 - 155
Target Start/End: Original strand, 39484359 - 39484470
Alignment:
Q  44 tagtggctagatttcaccttataagatgaataagtgggatgttcggagttcgaatctcaaatcctacatataataatacattgtcctaccaactgatcaa 143  Q
    |||||| |||| |||||||||||||||||||||||||| ||| |||  |||||| | |    ||| ||||||||||| |||||||||||||||||| | |    
T  39484359 tagtggttagaattcaccttataagatgaataagtggggtgtccggcattcgaaccccggcccctgcatataataatgcattgtcctaccaactgagcta 39484458  T
Q  144 tgctcacgggac 155  Q
    ||||||||||||    
T  39484459 tgctcacgggac 39484470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 44 - 157
Target Start/End: Original strand, 5184876 - 5184989
Alignment:
Q  44 tagtggctagatttcaccttataagatgaataagtgggatgttcggagttcgaatctcaaatcctacatataataatacattgtcctaccaactgatcaa 143  Q
    |||||| |||| ||||||||||||| |||||||||||| ||| | | ||||||| | ||   ||| ||||||||||| |||||||||||||||||| | |    
T  5184876 tagtggttagaattcaccttataaggtgaataagtggggtgtccagggttcgaaccccagcccctgcatataataatccattgtcctaccaactgagcta 5184975  T
Q  144 tgctcacgggacac 157  Q
    ||||||| ||||||    
T  5184976 tgctcacaggacac 5184989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 43 - 155
Target Start/End: Complemental strand, 10970373 - 10970261
Alignment:
Q  43 ctagtggctagatttcaccttataagatgaataagtgggatgttcggagttcgaatctcaaatcctacatataataatacattgtcctaccaactgatca 142  Q
    |||||||||||| |||| |||||||| |||||||||||| ||||||| ||| ||| | ||   ||| ||||||||||| |||| ||||||||||||| |     
T  10970373 ctagtggctagaattcatcttataaggtgaataagtggggtgttcggggtttgaaccccagcccctgcatataataatgcattatcctaccaactgagct 10970274  T
Q  143 atgctcacgggac 155  Q
    |||||||| ||||    
T  10970273 atgctcacaggac 10970261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 43 - 155
Target Start/End: Complemental strand, 30461643 - 30461531
Alignment:
Q  43 ctagtggctagatttcaccttataagatgaataagtgggatgttcggagttcgaatctcaaatcctacatataataatacattgtcctaccaactgatca 142  Q
    |||||||||||| ||||||||||||| |||||||||| |||||  |||||||||| | ||  | || ||||||||||||| || ||||||||| ||| |     
T  30461643 ctagtggctagaattcaccttataaggtgaataagtgagatgtctggagttcgaaccccaggtgctgcatataataataccttatcctaccaattgagct 30461544  T
Q  143 atgctcacgggac 155  Q
    ||||| |||||||    
T  30461543 atgcttacgggac 30461531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 36 - 156
Target Start/End: Original strand, 40249859 - 40249981
Alignment:
Q  36 aggtagtctagtggctagatttcaccttataagatgaataagtggga--tgttcggagttcgaatctcaaatc-ctacatataataatacattgtcctac 132  Q
    |||||| ||||||| |||| |||| |||||||| |||||||||||||  ||| ||||||||||| |||  ||| || ||||||||||| |||||||||||    
T  40249859 aggtagcctagtggttagaattcatcttataaggtgaataagtgggaggtgtccggagttcgaa-ctccgatcactgcatataataatgcattgtcctac 40249957  T
Q  133 caactgatcaatgctcacgggaca 156  Q
    |||||||   ||||||||||||||    
T  40249958 caactgagttatgctcacgggaca 40249981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 36 - 139
Target Start/End: Original strand, 25139868 - 25139971
Alignment:
Q  36 aggtagtctagtggctagatttcaccttataagatgaataagtgggatgttcggagttcgaatctcaaatcctacatataataatacattgtcctaccaa 135  Q
    ||||||| | |||| |||| ||||| |||||||||||||||||||||||||||| ||||||| | | |  ||| ||||||||||| |||||| ||| |||    
T  25139868 aggtagtttggtggttagaattcacattataagatgaataagtgggatgttcggggttcgaaccccgacccctgcatataataatgcattgttctaacaa 25139967  T
Q  136 ctga 139  Q
    ||||    
T  25139968 ctga 25139971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 39 - 139
Target Start/End: Original strand, 44360921 - 44361018
Alignment:
Q  39 tagtctagtggctagatttcaccttataagatgaataagtgggatgttcggagttcgaatctcaaatcctacatataataatacattgtcctaccaactg 138  Q
    |||||||||||||||| ||||||||||||| || |||||||||||| |||| ||||||| | |||  ||| |||   ||||| |||||||||||||||||    
T  44360921 tagtctagtggctagaattcaccttataaggtggataagtgggatgatcggggttcgaaccccaacccctgcat---ataatgcattgtcctaccaactg 44361017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 36 - 97
Target Start/End: Complemental strand, 14683990 - 14683929
Alignment:
Q  36 aggtagtctagtggctagatttcaccttataagatgaataagtgggatgttcggagttcgaa 97  Q
    ||||||||||||| ||||| ||||||||||||| |||||||||||||||| ||| |||||||    
T  14683990 aggtagtctagtgactagaattcaccttataaggtgaataagtgggatgtccggggttcgaa 14683929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 36 - 156
Target Start/End: Original strand, 23857304 - 23857425
Alignment:
Q  36 aggtagtctagtggctagatttcaccttataagatgaataagtgggatgttcggagttcgaatctcaaatcc-tacatataataatacattgtcctacca 134  Q
    |||||| |||||||||||| |||||| |||||||||||||||| || ||| ||  ||||||| | |    || | ||||||||||| |||||||||||||    
T  23857304 aggtagcctagtggctagaattcaccgtataagatgaataagtcgggtgtccgaggttcgaaccccggccccctgcatataataatgcattgtcctacca 23857403  T
Q  135 actgatcaatgctcacgggaca 156  Q
    ||||| | ||||||||||||||    
T  23857404 actgagctatgctcacgggaca 23857425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 36 - 156
Target Start/End: Complemental strand, 28378927 - 28378806
Alignment:
Q  36 aggtagtctagtggctagatttcaccttataagatgaataagt-gggatgttcggagttcgaatctcaaatcctacatataataatacattgtcctacca 134  Q
    ||||||| |||||| |||| ||||||||||||| ||||||||| ||| ||| ||| ||||||| ||||   ||| ||||||||||||  |||||||||||    
T  28378927 aggtagtttagtggttagaattcaccttataaggtgaataagtgggggtgtccggggttcgaacctcagcccctgcatataataatatcttgtcctacca 28378828  T
Q  135 actgatcaatgctcacgggaca 156  Q
    | ||| | ||| ||||||||||    
T  28378827 attgagctatgttcacgggaca 28378806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 38 - 139
Target Start/End: Original strand, 43874960 - 43875061
Alignment:
Q  38 gtagtctagtggctagatttcaccttataagatgaataagtgggatgttcggagttcgaatctcaaatcctacatataataatacattgtcctaccaact 137  Q
    |||| ||||| | |||| ||||||||||||| |||||||||||| |||  || ||||||| ||||   ||||||||||||||| |||||||||| |||||    
T  43874960 gtagcctagttgttagaattcaccttataaggtgaataagtggggtgtctggtgttcgaacctcagcccctacatataataatgcattgtcctatcaact 43875059  T
Q  138 ga 139  Q
    ||    
T  43875060 ga 43875061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 48 - 156
Target Start/End: Complemental strand, 9525059 - 9524951
Alignment:
Q  48 ggctagatttcaccttataagatgaataagtgggatgttcggagttcgaatctcaaatcctacatataataatacattgtcctaccaactgatcaatgct 147  Q
    ||||||| ||||||||||||| ||||||||| || |||  || ||||||| | |    ||| ||||||||||| |||||||||||||||||| | |||||    
T  9525059 ggctagaattcaccttataaggtgaataagtagggtgtctggggttcgaaccccggcccctgcatataataatgcattgtcctaccaactgagctatgct 9524960  T
Q  148 cacgggaca 156  Q
    |||||||||    
T  9524959 cacgggaca 9524951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 56 - 156
Target Start/End: Original strand, 9737361 - 9737461
Alignment:
Q  56 ttcaccttataagatgaataagtgggatgttcggagttcgaatctcaaatcctacatataataatacattgtcctaccaactgatcaatgctcacgggac 155  Q
    ||||||||||||  | |||||||||| ||| ||||||||||| |||    |||| ||||||||||  ||||||||||||||||| | |||||||||||||    
T  9737361 ttcaccttataaagtaaataagtggggtgtccggagttcgaacctcggcccctatatataataatgtattgtcctaccaactgagctatgctcacgggac 9737460  T
Q  156 a 156  Q
    |    
T  9737461 a 9737461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 36 - 156
Target Start/End: Original strand, 25689369 - 25689489
Alignment:
Q  36 aggtagtctagtggctagatttcaccttataagatgaataagtgggatgttcggagttcgaatctcaaatcctacatataataatacattgtcctaccaa 135  Q
    |||||| ||||||| |||| ||||| ||||||| ||| ||||| || ||| ||| ||||||| |||    ||||||||||||||| || |||||||||||    
T  25689369 aggtagcctagtggttagaattcactttataaggtgattaagtagggtgtccggggttcgaacctcggcccctacatataataatgcagtgtcctaccaa 25689468  T
Q  136 ctgatcaatgctcacgggaca 156  Q
    |||| | ||||||||| ||||    
T  25689469 ctgagctatgctcacgagaca 25689489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 48 - 155
Target Start/End: Original strand, 24608476 - 24608583
Alignment:
Q  48 ggctagatttcaccttataagatgaataagtgggatgttcggagttcgaatctcaaatcctacatataataatacattgtcctaccaactgatcaatgct 147  Q
    ||||||| ||||||||||||| ||||||||| || |||  || ||||||| | |    ||| ||||||||||| |||||||||||||||||| | |||||    
T  24608476 ggctagaattcaccttataaggtgaataagtagggtgtctggggttcgaaccccggcccctgcatataataatgcattgtcctaccaactgagctatgct 24608575  T
Q  148 cacgggac 155  Q
    ||||||||    
T  24608576 cacgggac 24608583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 36 - 155
Target Start/End: Original strand, 27558852 - 27558970
Alignment:
Q  36 aggtagtctagtggctagatttcaccttataagatgaataagtgggatgttcggagttcgaatctcaaatcctacatataataatacattgtcctaccaa 135  Q
    |||||| |||||||||||| ||||||| ||||| |||||||||||| || || | ||||||||| | |  ||| ||||||||||| |||| |||||||||    
T  27558852 aggtagactagtggctagaattcacctaataaggtgaataagtggggtg-tctgggttcgaatcccgacccctgcatataataatgcattatcctaccaa 27558950  T
Q  136 ctgatcaatgctcacgggac 155  Q
     ||| | | |||||||||||    
T  27558951 atgagctacgctcacgggac 27558970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 39 - 156
Target Start/End: Complemental strand, 6064488 - 6064371
Alignment:
Q  39 tagtctagtggctagatttcaccttataagatgaataagtgggatgttcggagttcgaatctcaaatcctacatataataatacattgtcctaccaactg 138  Q
    |||||||||||||||| ||||||||||||| ||||||||||   ||| ||  ||||||| | | |  ||| ||||||||||| |||||||| ||||| ||    
T  6064488 tagtctagtggctagaattcaccttataagctgaataagtgaagtgtccgaggttcgaaccccgacccctgcatataataatgcattgtccaaccaattg 6064389  T
Q  139 atcaatgctcacgggaca 156  Q
    | | | ||||||||||||    
T  6064388 agctaagctcacgggaca 6064371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 36 - 157
Target Start/End: Complemental strand, 8682495 - 8682374
Alignment:
Q  36 aggtagtctagtggctagatttcaccttataagatgaataagtgggatgttcggagttcgaatctcaaatcctacatataataatacattgtcctaccaa 135  Q
    |||||| |||||| ||||| |||||||||||  ||||||||| ||  ||| ||| |||||||   |||  ||| ||||||||||   |||||||||||||    
T  8682495 aggtagcctagtgactagaattcaccttatataatgaataaggggactgtccggggttcgaactccaacccctgcatataataaagaattgtcctaccaa 8682396  T
Q  136 ctgatcaatgctcacgggacac 157  Q
    |||| | |||||||||||||||    
T  8682395 ctgagctatgctcacgggacac 8682374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 36 - 97
Target Start/End: Original strand, 14684197 - 14684258
Alignment:
Q  36 aggtagtctagtggctagatttcaccttataagatgaataagtgggatgttcggagttcgaa 97  Q
    |||||| |||||||||| | |||||||||||||||||||||||||| ||| || ||||||||    
T  14684197 aggtagcctagtggctataattcaccttataagatgaataagtggggtgtccgaagttcgaa 14684258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 106 - 155
Target Start/End: Complemental strand, 29108706 - 29108657
Alignment:
Q  106 cctacatataataatacattgtcctaccaactgatcaatgctcacgggac 155  Q
    ||||||||||||||| |||||||||||||||||| | |||||||||||||    
T  29108706 cctacatataataatgcattgtcctaccaactgagctatgctcacgggac 29108657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 36 - 81
Target Start/End: Original strand, 36359699 - 36359744
Alignment:
Q  36 aggtagtctagtggctagatttcaccttataagatgaataagtggg 81  Q
    ||||||||||||||||||| ||||||||||||| ||||||||||||    
T  36359699 aggtagtctagtggctagaattcaccttataaggtgaataagtggg 36359744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 44 - 156
Target Start/End: Original strand, 14010761 - 14010873
Alignment:
Q  44 tagtggctagatttcaccttataagatgaataagtgggatgttcggagttcgaatctcaaatcctacatataataatacattgtcctaccaactgatcaa 143  Q
    ||||||||||| || |||||||||| |||||||||||| ||| ||| ||||||| | | |     |||||||||||| || |||| |||||||||| | |    
T  14010761 tagtggctagaatttaccttataaggtgaataagtggggtgtccggggttcgaaccccgaccataacatataataatgcactgtcttaccaactgagcta 14010860  T
Q  144 tgctcacgggaca 156  Q
    |||||||||||||    
T  14010861 tgctcacgggaca 14010873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 47 - 139
Target Start/End: Complemental strand, 37219608 - 37219516
Alignment:
Q  47 tggctagatttcaccttataagatgaataagtgggatgttcggagttcgaatctcaaatcctacatataataatacattgtcctaccaactga 139  Q
    |||||||| |||| |||||||| ||||||| |||| ||| ||| ||| ||| | |||  ||| |||||||||||| |||||||||||||||||    
T  37219608 tggctagaattcatcttataaggtgaataaatggggtgtccggggtttgaaccccaacacctgcatataataatatattgtcctaccaactga 37219516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 62 - 157
Target Start/End: Original strand, 40329212 - 40329307
Alignment:
Q  62 ttataagatgaataagtgggatgttcggagttcgaatctcaaatc-ctacatataataatacattgtcctaccaactgatcaatgctcacgggacac 157  Q
    |||||||||||||||||||||||| || ||||| || ||| || | ||| |||||||||| |||||| |||||||| || | |||||||||||||||    
T  40329212 ttataagatgaataagtgggatgtccgaagttcaaa-ctccaaccgctatatataataatgcattgttctaccaaccgagctatgctcacgggacac 40329307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 36 - 120
Target Start/End: Original strand, 41125415 - 41125498
Alignment:
Q  36 aggtagtctagtggctagatttcaccttataagatgaataagtgggatgttcggagttcgaatctcaaatcctacatataataat 120  Q
    |||||| |||||| ||||| ||||||||||||| |||||||||||||||| |||| ||||||  || |  |||||||||||||||    
T  41125415 aggtagcctagtg-ctagaattcaccttataaggtgaataagtgggatgtccggacttcgaacttcgacccctacatataataat 41125498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 108 - 156
Target Start/End: Original strand, 41225718 - 41225766
Alignment:
Q  108 tacatataataatacattgtcctaccaactgatcaatgctcacgggaca 156  Q
    ||||||||||||| |||||||||||||||||| | ||||||||||||||    
T  41225718 tacatataataatgcattgtcctaccaactgagctatgctcacgggaca 41225766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 36 - 152
Target Start/End: Original strand, 44070349 - 44070465
Alignment:
Q  36 aggtagtctagtggctagatttcaccttataagatgaataagtgggatgttcggagttcgaatctcaaatcctacatataataatacattgtcctaccaa 135  Q
    ||||||| ||||||||||| ||||||||||||| ||||||||| || ||| ||  ||||||| | |    |||||||||||||||  |||||||||| ||    
T  44070349 aggtagtttagtggctagaattcaccttataaggtgaataagtagggtgtccgaggttcgaaccgcggcccctacatataataatgtattgtcctactaa 44070448  T
Q  136 ctgatcaatgctcacgg 152  Q
    |||| | | ||||||||    
T  44070449 ctgagctacgctcacgg 44070465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 44 - 139
Target Start/End: Original strand, 10199731 - 10199826
Alignment:
Q  44 tagtggctagatttcaccttataagatgaataagtgggatgttcggagttcgaatctcaaatcctacatataataatacattgtcctaccaactga 139  Q
    |||| |||||| ||||||||||||| |||||||||||| |||| || ||||||| | |    ||| ||||||||||| ||||||||||| ||||||    
T  10199731 tagtagctagaattcaccttataaggtgaataagtggggtgtttggggttcgaaccccggcccctgcatataataatgcattgtcctactaactga 10199826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 36 - 139
Target Start/End: Complemental strand, 27822184 - 27822081
Alignment:
Q  36 aggtagtctagtggctagatttcaccttataagatgaataagtgggatgttcggagttcgaatctcaaatcctacatataataatacattgtcctaccaa 135  Q
    |||||||||| |||||| | ||| ||||||||| |||||||||||| |||| || |||| ||||   |  ||| ||||||||||| |||| |||||||||    
T  27822184 aggtagtctaatggctaaaattctccttataaggtgaataagtggggtgtttggggttcaaatccggacccctgcatataataatgcattatcctaccaa 27822085  T
Q  136 ctga 139  Q
    ||||    
T  27822084 ctga 27822081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 58 - 131
Target Start/End: Complemental strand, 8034622 - 8034549
Alignment:
Q  58 caccttataagatgaataagtgggatgttcggagttcgaatctcaaatcctacatataataatacattgtccta 131  Q
    ||||||||||| |||||||||||| ||||||| ||||||| | |   |||| ||||||||||| ||||||||||    
T  8034622 caccttataaggtgaataagtggggtgttcggggttcgaaccccggctcctgcatataataatgcattgtccta 8034549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 36 - 157
Target Start/End: Complemental strand, 27868820 - 27868699
Alignment:
Q  36 aggtagtctagtggctagatttcaccttataagatgaataagtgggatgttcggagttcgaatctcaaatcctacatataataatacattgtcctaccaa 135  Q
    ||||||| || |||||||| |||||||||||||  |||||| |||||||||||   ||||||   |||  ||| |||||||||||  ||| | |||||||    
T  27868820 aggtagtataatggctagaattcaccttataaggagaataaatgggatgttcgagattcgaacaccaacccctgcatataataatgtattattctaccaa 27868721  T
Q  136 ctgatcaatgctcacgggacac 157  Q
    |||| | ||||||| |||||||    
T  27868720 ctgagctatgctcatgggacac 27868699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 110 - 155
Target Start/End: Complemental strand, 28465658 - 28465613
Alignment:
Q  110 catataataatacattgtcctaccaactgatcaatgctcacgggac 155  Q
    ||||||||||| |||||||||||||||||| | |||||||||||||    
T  28465658 catataataatgcattgtcctaccaactgagctatgctcacgggac 28465613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 36 - 97
Target Start/End: Complemental strand, 30542878 - 30542817
Alignment:
Q  36 aggtagtctagtggctagatttcaccttataagatgaataagtgggatgttcggagttcgaa 97  Q
    ||||| |||||||| |||| ||||||||||||| ||||||| ||| |||||||| |||||||    
T  30542878 aggtattctagtggttagaattcaccttataaggtgaataaatggaatgttcggggttcgaa 30542817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 36 - 81
Target Start/End: Complemental strand, 39258694 - 39258649
Alignment:
Q  36 aggtagtctagtggctagatttcaccttataagatgaataagtggg 81  Q
    |||||| |||||||||||| || |||||||||||||||||||||||    
T  39258694 aggtagcctagtggctagaatttaccttataagatgaataagtggg 39258649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 70 - 139
Target Start/End: Original strand, 43763294 - 43763362
Alignment:
Q  70 tgaataagtgggatgttcggagttcgaatctcaaatcctacatataataatacattgtcctaccaactga 139  Q
    ||||||||||||||||| | |||| ||| ||| |  |||||||||||||||| |||||||||||||||||    
T  43763294 tgaataagtgggatgttag-agtttgaacctccacccctacatataataataaattgtcctaccaactga 43763362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 39 - 139
Target Start/End: Complemental strand, 6978931 - 6978831
Alignment:
Q  39 tagtctagtggctagatttcaccttataagatgaataagtgggatgttcggagttcgaatctcaaatcctacatataataatacattgtcctaccaactg 138  Q
    ||||||| |||||||| ||||| ||||||| ||||||| |||  ||||||  ||||||| | |||  ||| ||||||||||| |||| ||||| ||||||    
T  6978931 tagtctaatggctagaattcactttataaggtgaataaatggagtgttcgtggttcgaaccccaacccctgcatataataatgcattatcctatcaactg 6978832  T
Q  139 a 139  Q
    |    
T  6978831 a 6978831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 38 - 81
Target Start/End: Complemental strand, 7603849 - 7603806
Alignment:
Q  38 gtagtctagtggctagatttcaccttataagatgaataagtggg 81  Q
    |||| |||||||||||| |||||| |||||||||||||||||||    
T  7603849 gtagcctagtggctagaattcaccctataagatgaataagtggg 7603806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 36 - 153
Target Start/End: Complemental strand, 10292466 - 10292348
Alignment:
Q  36 aggtagtctagtggctagat-ttcaccttataagatgaataagtgggatgttcggagttcgaatctcaaatcctacatataataatacattgt-cctacc 133  Q
    |||||||||||||||||||  ||||| ||  ||| |||||||||||| ||| ||  ||||||||||||   ||| ||||||||||| |||||| ||| ||    
T  10292466 aggtagtctagtggctagaaattcacttttaaag-tgaataagtggggtgtccgaggttcgaatctcagcccctgcatataataatgcattgtccctgcc 10292368  T
Q  134 aactgatcaatgctcacggg 153  Q
    |||||| | |||||||||||    
T  10292367 aactgagctatgctcacggg 10292348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 38 - 81
Target Start/End: Original strand, 13537294 - 13537337
Alignment:
Q  38 gtagtctagtggctagatttcaccttataagatgaataagtggg 81  Q
    ||||| ||||||||| | ||||||||||||||||||||||||||    
T  13537294 gtagtttagtggctacaattcaccttataagatgaataagtggg 13537337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 38 - 81
Target Start/End: Original strand, 13626842 - 13626885
Alignment:
Q  38 gtagtctagtggctagatttcaccttataagatgaataagtggg 81  Q
    ||||| ||||||||| | ||||||||||||||||||||||||||    
T  13626842 gtagtttagtggctacaattcaccttataagatgaataagtggg 13626885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 39 - 129
Target Start/End: Original strand, 22838027 - 22838118
Alignment:
Q  39 tagtctagtggctagatttcacc-ttataagatgaataagtgggatgttcggagttcgaatctcaaatcctacatataataatacattgtcc 129  Q
    |||||| ||||||||| |||||| ||||||| ||||||| || | ||| | ||||||||||| ||| ||||  ||||||||||| |||||||    
T  22838027 tagtctggtggctagaattcacccttataaggtgaataaatgtgctgtccagagttcgaatcccaactcctgaatataataatatattgtcc 22838118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 56 - 139
Target Start/End: Original strand, 23766408 - 23766491
Alignment:
Q  56 ttcaccttataagatgaataagtgggatgttcggagttcgaatctcaaatcctacatataataatacattgtcctaccaactga 139  Q
    |||||||||||||||||||||||    |||||||  || |||||||||  |||| |||||||||| |||| || ||||||||||    
T  23766408 ttcaccttataagatgaataagtatagtgttcgggatttgaatctcaacacctatatataataatgcattatcataccaactga 23766491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 56 - 99
Target Start/End: Original strand, 31821032 - 31821075
Alignment:
Q  56 ttcaccttataagatgaataagtgggatgttcggagttcgaatc 99  Q
    |||| ||| ||||| |||||||||||||||||||||||||||||    
T  31821032 ttcaacttttaagaagaataagtgggatgttcggagttcgaatc 31821075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 38 - 81
Target Start/End: Original strand, 33570412 - 33570455
Alignment:
Q  38 gtagtctagtggctagatttcaccttataagatgaataagtggg 81  Q
    ||||| ||||||||||| ||||||||||||| ||||||||||||    
T  33570412 gtagtttagtggctagaattcaccttataaggtgaataagtggg 33570455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 73 - 156
Target Start/End: Complemental strand, 43847779 - 43847696
Alignment:
Q  73 ataagtgggatgttcggagttcgaatctcaaatcctacatataataatacattgtcctaccaactgatcaatgctcacgggaca 156  Q
    ||||||||| ||||||| ||||||| | |    ||| ||||||||||| |||||||||||||||||| | ||||||||| ||||    
T  43847779 ataagtggggtgttcggggttcgaaccccggcccctgcatataataatgcattgtcctaccaactgagctatgctcacgagaca 43847696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 110 - 156
Target Start/End: Original strand, 13762567 - 13762613
Alignment:
Q  110 catataataatacattgtcctaccaactgatcaatgctcacgggaca 156  Q
    ||||||||||| |||||||||||||||||| | |||||||| |||||    
T  13762567 catataataatgcattgtcctaccaactgaactatgctcacaggaca 13762613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 36 - 153
Target Start/End: Complemental strand, 14012726 - 14012608
Alignment:
Q  36 aggtagtctagtggctagatttcaccttataagatgaataagtgggatgttcggagttcgaatctcaaatcctacatataataatacattgt-cctacca 134  Q
    ||||||| ||||||||| | ||||||||||||  |||||||||||| ||| |||| |||||| | |    ||| ||||||| ||| |||||| ||| |||    
T  14012726 aggtagtttagtggctaaaattcaccttataatgtgaataagtggggtgtccggacttcgaaccccggcccctgcatataacaatgcattgtccctgcca 14012627  T
Q  135 actgatcaatgctcacggg 153  Q
    ||||| | |||||||||||    
T  14012626 actgaactatgctcacggg 14012608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 110 - 156
Target Start/End: Complemental strand, 17980322 - 17980276
Alignment:
Q  110 catataataatacattgtcctaccaactgatcaatgctcacgggaca 156  Q
    ||||||||||| | |||||||||||||||| | ||||||||||||||    
T  17980322 catataataatgctttgtcctaccaactgagctatgctcacgggaca 17980276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 37 - 131
Target Start/End: Original strand, 30942582 - 30942675
Alignment:
Q  37 ggtagtctagtggctagatttcaccttataagatgaataagtgggatgttcggagttcgaatctcaaatcctacatataataatacattgtccta 131  Q
    ||||||||| |||||| | ||||||||||||| | |||||||||| ||||||| ||||||| | |    ||| ||||||||||| ||||||||||    
T  30942582 ggtagtcta-tggctataattcaccttataaggtaaataagtggggtgttcggggttcgaaccccggcccctgcatataataatgcattgtccta 30942675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 36 - 98
Target Start/End: Complemental strand, 37154628 - 37154566
Alignment:
Q  36 aggtagtctagtggctagatttcaccttataagatgaataagtgggatgttcggagttcgaat 98  Q
    ||||||||||||| ||||| ||||||||||||| ||||||| |||| ||| | | ||||||||    
T  37154628 aggtagtctagtgcctagaattcaccttataaggtgaataaatggggtgtccagggttcgaat 37154566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 110 - 155
Target Start/End: Complemental strand, 2376558 - 2376513
Alignment:
Q  110 catataataatacattgtcctaccaactgatcaatgctcacgggac 155  Q
    ||||||||||| |||||||||||||| ||| | |||||||||||||    
T  2376558 catataataatgcattgtcctaccaattgaactatgctcacgggac 2376513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 111 - 156
Target Start/End: Original strand, 25689503 - 25689548
Alignment:
Q  111 atataataatacattgtcctaccaactgatcaatgctcacgggaca 156  Q
    |||||||||| |||||||| ||||||||| | ||||||||||||||    
T  25689503 atataataatgcattgtccaaccaactgagctatgctcacgggaca 25689548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 106 - 155
Target Start/End: Original strand, 35556437 - 35556486
Alignment:
Q  106 cctacatataataatacattgtcctaccaactgatcaatgctcacgggac 155  Q
    |||||||||| |||| |||||||||||||||| | | |||||||||||||    
T  35556437 cctacatatactaatgcattgtcctaccaactaagctatgctcacgggac 35556486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 36 - 136
Target Start/End: Original strand, 42762013 - 42762111
Alignment:
Q  36 aggtagtctagtggctagatttcaccttataagatgaataagtgggatgttcggagttcgaatctcaaatcctacatataataatacattgtcctaccaa 135  Q
    ||||||||||||||||||| |||||||  |||| |||||||||||| ||| |||  || ||| ||| |  ||| |||||| |||| |||||||||| |||    
T  42762013 aggtagtctagtggctagaattcacct--taaggtgaataagtggggtgtccgggatttgaacctcgacccctgcatatagtaatgcattgtcctatcaa 42762110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #66
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 36 - 81
Target Start/End: Original strand, 44923278 - 44923323
Alignment:
Q  36 aggtagtctagtggctagatttcaccttataagatgaataagtggg 81  Q
    ||||||||||||| ||| | ||||||||||||||||||||| ||||    
T  44923278 aggtagtctagtgactatagttcaccttataagatgaataaatggg 44923323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #67
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 38 - 97
Target Start/End: Original strand, 8349464 - 8349525
Alignment:
Q  38 gtagtctagtggctagat---ttcaccttataagatgaataagtgggatgttcggagttcgaa 97  Q
    |||||||||||| |||||   |||| |||| |||||||||||||||| |||||||||||||||    
T  8349464 gtagtctagtggttagataaattcatctta-aagatgaataagtggggtgttcggagttcgaa 8349525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #68
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 56 - 152
Target Start/End: Original strand, 44136278 - 44136374
Alignment:
Q  56 ttcaccttataagatgaataagtgggatgttcggagttcgaatctcaaatcctacatataataatacattgtcctaccaactgatcaatgctcacgg 152  Q
    ||||||||||||  ||||||| || | |||  || ||||||| ||||   ||| |||||||||||| |||||||||||||||||   ||||||||||    
T  44136278 ttcaccttataaagtgaataattgaggtgtctggggttcgaacctcagcccctgcatataataatatattgtcctaccaactgagttatgctcacgg 44136374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 61; Significance: 4e-26; HSPs: 55)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 43 - 155
Target Start/End: Original strand, 2029116 - 2029228
Alignment:
Q  43 ctagtggctagatttcaccttataagatgaataagtgggatgttcggagttcgaatctcaaatcctacatataataatacattgtcctaccaactgatca 142  Q
    |||||||||||| ||||||||||||| |||||||||||| ||||||| ||||||||| | |  ||| |||||||||||||||||||||||||||| |       
T  2029116 ctagtggctagaattcaccttataaggtgaataagtggggtgttcggggttcgaatcccgacccctgcatataataatacattgtcctaccaactaagtt 2029215  T
Q  143 atgctcacgggac 155  Q
    |||||||||||||    
T  2029216 atgctcacgggac 2029228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 38 - 139
Target Start/End: Complemental strand, 14487673 - 14487572
Alignment:
Q  38 gtagtctagtggctagatttcaccttataagatgaataagtgggatgttcggagttcgaatctcaaatcctacatataataatacattgtcctaccaact 137  Q
    |||||||| |||||||| ||||||||||||| |||||||||||||| | ||  ||||||| | |||  ||||||||||||||| ||||||||||||||||    
T  14487673 gtagtctaatggctagaattcaccttataaggtgaataagtgggatatccgaggttcgaaccccaacccctacatataataatgcattgtcctaccaact 14487574  T
Q  138 ga 139  Q
    ||    
T  14487573 ga 14487572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 36 - 156
Target Start/End: Original strand, 32158395 - 32158515
Alignment:
Q  36 aggtagtctagtggctagatttcaccttataagatgaataagtgggatgttcggagttcgaatctcaaatcctacatataataatacattgtcctaccaa 135  Q
    |||||| |||||||||||| ||||||||||||| |||||||||||| ||||||| ||||||| | |    ||| ||||||||||| ||||||||||||||    
T  32158395 aggtagcctagtggctagaattcaccttataaggtgaataagtggggtgttcggggttcgaaccccggcccctgcatataataatgcattgtcctaccaa 32158494  T
Q  136 ctgatcaatgctcacgggaca 156  Q
     ||| | | ||||||||||||    
T  32158495 ttgagctaagctcacgggaca 32158515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 36 - 154
Target Start/End: Complemental strand, 18872633 - 18872517
Alignment:
Q  36 aggtagtctagtggctagatttcaccttataagatgaataagtgggatgttcggagttcgaatctcaaatcctacatataataatacattgtcctaccaa 135  Q
    |||||| |||||||||||| |||||||||  || |||||||||||| ||||||| ||||||| | | |  ||| ||||||||||| ||||||||||||||    
T  18872633 aggtagcctagtggctagaattcacctta--aggtgaataagtggggtgttcggggttcgaaccccgacccctgcatataataatgcattgtcctaccaa 18872536  T
Q  136 ctgatcaatgctcacggga 154  Q
    |||| | ||||||||||||    
T  18872535 ctgagctatgctcacggga 18872517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 36 - 158
Target Start/End: Original strand, 19058985 - 19059107
Alignment:
Q  36 aggtagtctagtggctagatttcaccttataagatgaataagtgggatgttcggagttcgaatctcaaatcctacatataataatacattgtcctaccaa 135  Q
    |||||| |||||||||||| ||||||||||||| |||||||||||| ||| | | ||||||| | |    ||| ||||| ||||| ||||||||||||||    
T  19058985 aggtaggctagtggctagaattcaccttataaggtgaataagtggggtgtccagggttcgaaccccggcccctgcatatgataatgcattgtcctaccaa 19059084  T
Q  136 ctgatcaatgctcacgggacaca 158  Q
    |||| | ||||||||||||||||    
T  19059085 ctgagctatgctcacgggacaca 19059107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 38 - 156
Target Start/End: Original strand, 29629928 - 29630046
Alignment:
Q  38 gtagtctagtggctagatttcaccttataagatgaataagtgggatgttcggagttcgaatctcaaatcctacatataataatacattgtcctaccaact 137  Q
    ||||||| ||||||||| |||||||||||||||||||||||| | ||| | | |||||||||||||  ||||||||| ||||| |||||||||| ||| |    
T  29629928 gtagtctggtggctagaattcaccttataagatgaataagtgaggtgtccagggttcgaatctcaacccctacatatgataatgcattgtcctatcaatt 29630027  T
Q  138 gatcaatgctcacgggaca 156  Q
     | | |||| |||||||||    
T  29630028 aagctatgcccacgggaca 29630046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 36 - 149
Target Start/End: Original strand, 27440279 - 27440392
Alignment:
Q  36 aggtagtctagtggctagatttcaccttataagatgaataagtgggatgttcggagttcgaatctcaaatcctacatataataatacattgtcctaccaa 135  Q
    |||||||||||||||| || ||||||||||||| |||||| || || ||||||| ||||||| ||| |   || ||||||||||| ||||||||||||||    
T  27440279 aggtagtctagtggctcgagttcaccttataaggtgaatatgtagggtgttcggggttcgaacctcgaccactgcatataataatgcattgtcctaccaa 27440378  T
Q  136 ctgatcaatgctca 149  Q
    |||| | |||||||    
T  27440379 ctgagctatgctca 27440392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 36 - 156
Target Start/End: Original strand, 20945872 - 20945992
Alignment:
Q  36 aggtagtctagtggctagatttcaccttataagatgaataagtgggatgttcggagttcgaatctcaaatcctacatataataatacattgtcctaccaa 135  Q
    ||||| ||||||||||||| ||||||||||||| |||||||||||| ||| |||| |||||| | |    ||| ||||||||||| ||||||||||||||    
T  20945872 aggtaatctagtggctagaattcaccttataaggtgaataagtggggtgtccggatttcgaaccccggcccctgcatataataatgcattgtcctaccaa 20945971  T
Q  136 ctgatcaatgctcacgggaca 156  Q
     |||   ||||||||||||||    
T  20945972 ttgagttatgctcacgggaca 20945992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 36 - 139
Target Start/End: Original strand, 6671767 - 6671870
Alignment:
Q  36 aggtagtctagtggctagatttcaccttataagatgaataagtgggatgttcggagttcgaatctcaaatcctacatataataatacattgtcctaccaa 135  Q
    ||||| ||||||||||||| |||||||||||||||||||||||| ||||| |||| |||||| |   | | ||  |||||||||| ||||||||||||||    
T  6671767 aggtaatctagtggctagaattcaccttataagatgaataagtgagatgtccggaattcgaaccctgatttctgtatataataatgcattgtcctaccaa 6671866  T
Q  136 ctga 139  Q
    ||||    
T  6671867 ctga 6671870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 38 - 137
Target Start/End: Original strand, 15978660 - 15978759
Alignment:
Q  38 gtagtctagtggctagatttcaccttataagatgaataagtgggatgttcggagttcgaatctcaaatcctacatataataatacattgtcctaccaact 137  Q
    |||| ||||||| || | ||||||||||||| |||||||||||| |||| || |||| || ||||   ||||||||||||||||||||||||||||||||    
T  15978660 gtagcctagtggttaaaattcaccttataaggtgaataagtggggtgtttggggttcaaacctcatcccctacatataataatacattgtcctaccaact 15978759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 36 - 157
Target Start/End: Original strand, 843349 - 843470
Alignment:
Q  36 aggtagtctagtggctagatttcaccttataagatgaataagtgggatgttcggagttcgaatctcaaatcctacatataataatacattgtcctaccaa 135  Q
    |||||| |||||||||||| ||||  ||||||| |||||||||||| ||| ||| ||||||| | |    ||||||||||||||| ||||||| ||||||    
T  843349 aggtagcctagtggctagaattcaatttataaggtgaataagtggggtgtccggggttcgaaccccgtcccctacatataataatgcattgtcataccaa 843448  T
Q  136 ctgatcaatgctcacgggacac 157  Q
    ||||   |||||||||||||||    
T  843449 ctgagatatgctcacgggacac 843470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 36 - 137
Target Start/End: Complemental strand, 6014893 - 6014792
Alignment:
Q  36 aggtagtctagtggctagatttcaccttataagatgaataagtgggatgttcggagttcgaatctcaaatcctacatataataatacattgtcctaccaa 135  Q
    |||||| |||||||||||| |||||||||||||||||||||||| | ||| |||||||| || | | |  ||||||||||||||| |||| |||||| ||    
T  6014893 aggtagcctagtggctagaattcaccttataagatgaataagtgaggtgtccggagttcaaaccccgatccctacatataataatgcattatcctacaaa 6014794  T
Q  136 ct 137  Q
    ||    
T  6014793 ct 6014792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 36 - 150
Target Start/End: Original strand, 29096289 - 29096403
Alignment:
Q  36 aggtagtctagtggctagatttcaccttataagatgaataagtgggatgttcggagttcgaatctcaaatcc-tacatataataatacattgtcctacca 134  Q
    |||||| |||||||||||| ||||||||||||| |||||||||||| ||| ||| ||||||| |||    || | ||||||||||| |||||||||||||    
T  29096289 aggtagcctagtggctagaattcaccttataaggtgaataagtggggtgtccggggttcgaa-ctccggcccttgcatataataatgcattgtcctacca 29096387  T
Q  135 actgatcaatgctcac 150  Q
    ||||| | ||||||||    
T  29096388 actgagctatgctcac 29096403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 36 - 151
Target Start/End: Complemental strand, 29841462 - 29841347
Alignment:
Q  36 aggtagtctagtggctagatttcaccttataagatgaataagtgggatgttcggagttcgaatctcaaatcctacatataataatacattgtcctaccaa 135  Q
    |||||| ||| |||||||| || ||||||||||  ||||||||||| ||| ||| |||||||||||    | | ||||||||||| ||||||||||||||    
T  29841462 aggtagcctaatggctagaatttaccttataaggggaataagtggggtgtccggggttcgaatctcggcccttgcatataataatgcattgtcctaccaa 29841363  T
Q  136 ctgatcaatgctcacg 151  Q
    |||| | |||||||||    
T  29841362 ctgagctatgctcacg 29841347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 38 - 139
Target Start/End: Complemental strand, 23925655 - 23925554
Alignment:
Q  38 gtagtctagtggctagatttcaccttataagatgaataagtgggatgttcggagttcgaatctcaaatcctacatataataatacattgtcctaccaact 137  Q
    ||||||||||||||||| |||||||||||||||||||||||||| | | |||  |||||| |   |  ||| ||||||||||| |||||||||| |||||    
T  23925655 gtagtctagtggctagaattcaccttataagatgaataagtggggtatccgggattcgaacccagacccctgcatataataatgcattgtcctatcaact 23925556  T
Q  138 ga 139  Q
    ||    
T  23925555 ga 23925554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 36 - 97
Target Start/End: Complemental strand, 29331357 - 29331296
Alignment:
Q  36 aggtagtctagtggctagatttcaccttataagatgaataagtgggatgttcggagttcgaa 97  Q
    |||||| |||||||||||| |||||||||||||||||||||||||  ||||||| |||||||    
T  29331357 aggtagcctagtggctagaattcaccttataagatgaataagtggagtgttcggggttcgaa 29331296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 36 - 155
Target Start/End: Original strand, 21017584 - 21017706
Alignment:
Q  36 aggtagtctagtggctagatttcaccttat---aagatgaataagtgggatgttcggagttcgaatctcaaatcctacatataataatacattgtcctac 132  Q
    |||||| ||| |||||||| ||||||||||   ||| |||||||||||||||| ||| |||| || | ||    |||||||||||||| |||||||||||    
T  21017584 aggtagcctactggctagaattcaccttattataaggtgaataagtgggatgtccggggttcaaaccccagccactacatataataatgcattgtcctac 21017683  T
Q  133 caactgatcaatgctcacgggac 155  Q
    ||||||| | ||| |||||||||    
T  21017684 caactgagctatgttcacgggac 21017706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 37 - 139
Target Start/End: Complemental strand, 6562011 - 6561909
Alignment:
Q  37 ggtagtctagtggctagatttcaccttataagatgaataagtgggatgttcggagttcgaatctcaaat-cctacatataataatacattgtcctaccaa 135  Q
    ||||| ||||||| |||| ||||||||||||| |||||| ||||| ||||||||||||||| |||  || ||| |||| |||||| |||| |||||||||    
T  6562011 ggtagcctagtggttagaattcaccttataaggtgaatatgtggggtgttcggagttcgaa-ctccgatccctgcataaaataatgcattatcctaccaa 6561913  T
Q  136 ctga 139  Q
    ||||    
T  6561912 ctga 6561909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 36 - 151
Target Start/End: Complemental strand, 18478117 - 18478002
Alignment:
Q  36 aggtagtctagtggctagatttcaccttataagatgaataagtgggatgttcggagttcgaatctcaaatcctacatataataatacattgtcctaccaa 135  Q
    |||||| ||| |||||||| ||||||||||||| |||||||||||| ||| | | ||||||| | |    ||  ||||||||||| ||||||||||||||    
T  18478117 aggtagcctaatggctagaattcaccttataaggtgaataagtggggtgtccagggttcgaaccccggccccagcatataataatgcattgtcctaccaa 18478018  T
Q  136 ctgatcaatgctcacg 151  Q
    |||| | |||||||||    
T  18478017 ctgagctatgctcacg 18478002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 36 - 139
Target Start/End: Complemental strand, 20762395 - 20762292
Alignment:
Q  36 aggtagtctagtggctagatttcaccttataagatgaataagtgggatgttcggagttcgaatctcaaatcctacatataataatacattgtcctaccaa 135  Q
    ||||||||||||| ||||| ||||||||||||| |||||||||||| ||| | | ||||||| | |||    || |||||||||| |||||| |||||||    
T  20762395 aggtagtctagtgactagaattcaccttataaggtgaataagtggggtgtccagggttcgaaccccaaccgttatatataataatgcattgttctaccaa 20762296  T
Q  136 ctga 139  Q
    ||||    
T  20762295 ctga 20762292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 36 - 155
Target Start/End: Complemental strand, 33801007 - 33800888
Alignment:
Q  36 aggtagtctagtggctagatttcaccttataagatgaataagtgggatgttcggagttcgaatctcaaatcctacatataataatacattgtcctaccaa 135  Q
    |||||| ||||| ||||||  |||||||||||| |||||||||||| |||  || ||||||| | |    ||| ||||||||||| ||||||||||||||    
T  33801007 aggtagcctagtagctagaactcaccttataaggtgaataagtggggtgtctggggttcgaaccccggcccctgcatataataatgcattgtcctaccaa 33800908  T
Q  136 ctgatcaatgctcacgggac 155  Q
    ||||   |||||||||||||    
T  33800907 ctgagttatgctcacgggac 33800888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 36 - 139
Target Start/End: Original strand, 42455375 - 42455478
Alignment:
Q  36 aggtagtctagtggctagatttcaccttataagatgaataagtgggatgttcggagttcgaatctcaaatcctacatataataatacattgtcctaccaa 135  Q
    |||||| |||||||||||| ||||||||||||| |||||||||||  ||| ||| |||||||   |    ||| ||||||||||| ||||||||||||||    
T  42455375 aggtagcctagtggctagaattcaccttataaggtgaataagtggagtgtccggggttcgaactccggcccctgcatataataatgcattgtcctaccaa 42455474  T
Q  136 ctga 139  Q
    ||||    
T  42455475 ctga 42455478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 43 - 156
Target Start/End: Original strand, 1244715 - 1244828
Alignment:
Q  43 ctagtggctagatttcaccttataagatgaataagtgggatgttcggagttcgaatctcaaatcctacatataataatacattgtcctaccaactgatca 142  Q
    |||||||||||| ||||||||||||| |||||||||||| |||  || ||||||| |   |  ||| ||||||||||| | |||||||||||||||  |     
T  1244715 ctagtggctagaattcaccttataaggtgaataagtggggtgtctggggttcgaaccctgacccctgcatataataatgctttgtcctaccaactgtgct 1244814  T
Q  143 atgctcacgggaca 156  Q
    |||||||| |||||    
T  1244815 atgctcacaggaca 1244828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 36 - 97
Target Start/End: Complemental strand, 21213008 - 21212947
Alignment:
Q  36 aggtagtctagtggctagatttcaccttataagatgaataagtgggatgttcggagttcgaa 97  Q
    ||||||| || |||||||| ||||||||||||||| |||||||||||||||| | |||||||    
T  21213008 aggtagtttaatggctagaattcaccttataagataaataagtgggatgttcagggttcgaa 21212947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 38 - 155
Target Start/End: Original strand, 27219546 - 27219663
Alignment:
Q  38 gtagtctagtggctagatttcaccttataagatgaataagtgggatgttcggagttcgaatctcaaatcctacatataataatacattgtcctaccaact 137  Q
    |||| |||||||||||| |||||||||| || |||||||||||| ||| ||| ||| ||| | |    | | ||||||||||| ||||||||||||||||    
T  27219546 gtagcctagtggctagaattcaccttattaggtgaataagtggggtgtacggggtttgaaccccggcccatgcatataataatgcattgtcctaccaact 27219645  T
Q  138 gatcaatgctcacgggac 155  Q
     | | |||||||||||||    
T  27219646 aagctatgctcacgggac 27219663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 36 - 136
Target Start/End: Complemental strand, 39760191 - 39760088
Alignment:
Q  36 aggtagtctagtggctagatttcaccttat---aagatgaataagtgggatgttcggagttcgaatctcaaatcctacatataataatacattgtcctac 132  Q
    |||||| | |||||||||| ||||||||||   ||| ||||||| |||||||||||| |||| ||   |||  ||| |||||||||||||||||||||||    
T  39760191 aggtagaccagtggctagaattcaccttattataaggtgaataaatgggatgttcggggttcaaactccaacccctgcatataataatacattgtcctac 39760092  T
Q  133 caac 136  Q
    ||||    
T  39760091 caac 39760088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 39 - 136
Target Start/End: Complemental strand, 42450189 - 42450092
Alignment:
Q  39 tagtctagtggctagatttcaccttataagatgaataagtgggatgttcggagttcgaatctcaaatcctacatataataatacattgtcctaccaac 136  Q
    |||||||||||||||| ||||||||||||| ||||||||| || | ||  | |||||||   ||   ||||||||||||||| |||||||||||||||    
T  42450189 tagtctagtggctagaattcaccttataagttgaataagtagggtatttagggttcgaactccagcccctacatataataatgcattgtcctaccaac 42450092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 36 - 155
Target Start/End: Original strand, 29106019 - 29106138
Alignment:
Q  36 aggtagtctagtggctagatttcaccttataagatgaataagtgggatgttcggagttcgaatctcaaatcctacatataataatacattgtcctaccaa 135  Q
    ||||||||| ||||||||| || |||||||||| |||||||||||| |||   | |||||||  ||    ||| ||||||||||| ||||||||||||||    
T  29106019 aggtagtctggtggctagaattaaccttataaggtgaataagtggggtgtctagggttcgaacttcggcccctgcatataataatgcattgtcctaccaa 29106118  T
Q  136 ctgatcaatgctcacgggac 155  Q
     ||| | |||||||| ||||    
T  29106119 ttgagctatgctcacaggac 29106138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 36 - 139
Target Start/End: Complemental strand, 29144256 - 29144153
Alignment:
Q  36 aggtagtctagtggctagatttcaccttataagatgaataagtgggatgttcggagttcgaatctcaaatcctacatataataatacattgtcctaccaa 135  Q
    ||||| |||||||| |||| ||||||||||||  ||||||| |||| |||  ||||||| || | | |  ||| ||||||||||| ||||||||||||||    
T  29144256 aggtaatctagtggttagaattcaccttataacgtgaataaatggggtgtctggagttcaaaccccgacccctgcatataataatgcattgtcctaccaa 29144157  T
Q  136 ctga 139  Q
    ||||    
T  29144156 ctga 29144153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 38 - 155
Target Start/End: Complemental strand, 33729890 - 33729772
Alignment:
Q  38 gtagtctagtggctagatttcaccttataagatgaataagtgggatgttcggag-ttcgaatctcaaatcctacatataataatacattgtcctaccaac 136  Q
    |||| ||||||| |||| ||||||||||||| |||||||||||| ||| | ||| |||||| | |    ||| ||||||||||| |||||||||||||||    
T  33729890 gtagcctagtggttagaattcaccttataaggtgaataagtggggtgt-ctgagattcgaaccccggcccctgcatataataatgcattgtcctaccaac 33729792  T
Q  137 tga-tcaatgctcacgggac 155  Q
    ||| | ||||||||||||||    
T  33729791 tgagttaatgctcacgggac 33729772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 36 - 155
Target Start/End: Original strand, 36888074 - 36888193
Alignment:
Q  36 aggtagtctagtggctagatttcaccttataagatgaataagtgggatgttcggagttcgaatctcaaatcctacatataataatacattgtcctaccaa 135  Q
    ||||||||| |||||| || |||||||||||||||||||||||||| | | | |  ||| || | |    ||| ||||||||||| ||||||||||||||    
T  36888074 aggtagtctggtggcttgaattcaccttataagatgaataagtggggtctccaggattccaaccccggcccctgcatataataatgcattgtcctaccaa 36888173  T
Q  136 ctgatcaatgctcacgggac 155  Q
    ||||   |||||||||||||    
T  36888174 ctgagatatgctcacgggac 36888193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 49 - 139
Target Start/End: Original strand, 2411288 - 2411378
Alignment:
Q  49 gctagatttcaccttataagatgaataagtgggatgttcggagttcgaatctcaaatcctacatataataatacattgtcctaccaactga 139  Q
    |||||| |||||| ||||||||||||||||||| |||  || |||||||   |    ||| ||||||||||||||||||||||||||||||    
T  2411288 gctagaattcaccatataagatgaataagtggggtgtctggggttcgaactccggcccctgcatataataatacattgtcctaccaactga 2411378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 36 - 153
Target Start/End: Original strand, 3102108 - 3102226
Alignment:
Q  36 aggtagtctagtggctagatttcaccttataagatgaataagtgggatgttcggagttcgaatctcaaatcctacatataataatacattgt-cctacca 134  Q
    ||||| ||||||||||||| ||||| ||||||  | ||||| |||| ||||||| ||||||| | | | |||||||||||| ||| |||||| ||| |||    
T  3102108 aggtaatctagtggctagaattcactttataaagtaaataaatggggtgttcggggttcgaaccccgactcctacatataacaatgcattgtccctgcca 3102207  T
Q  135 actgatcaatgctcacggg 153  Q
    ||||| | ||||| |||||    
T  3102208 actgagctatgcttacggg 3102226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 36 - 78
Target Start/End: Complemental strand, 5157011 - 5156969
Alignment:
Q  36 aggtagtctagtggctagatttcaccttataagatgaataagt 78  Q
    ||||||||||||||||||| ||||||||||||| |||||||||    
T  5157011 aggtagtctagtggctagaattcaccttataaggtgaataagt 5156969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 36 - 153
Target Start/End: Original strand, 6806621 - 6806739
Alignment:
Q  36 aggtagtctagtggctagatttcaccttataagatgaataagtgggatgttcggagttcgaatctcaaatcctacatataataatacattgtc-ctacca 134  Q
    |||||| ||| |||||||| ||||||||||||  |||||||||||  ||| ||| ||||||||| | |  ||| ||||||| ||| ||||||| || |||    
T  6806621 aggtagcctaatggctagaattcaccttataatgtgaataagtggagtgtccggggttcgaatcccgacccctgcatataacaatgcattgtctctgcca 6806720  T
Q  135 actgatcaatgctcacggg 153  Q
    ||||| | |||||||||||    
T  6806721 actgagctatgctcacggg 6806739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 110 - 156
Target Start/End: Complemental strand, 10508620 - 10508574
Alignment:
Q  110 catataataatacattgtcctaccaactgatcaatgctcacgggaca 156  Q
    |||||||||||||||||||||||||||||| | ||| ||||||||||    
T  10508620 catataataatacattgtcctaccaactgagctatgttcacgggaca 10508574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 56 - 138
Target Start/End: Complemental strand, 23648422 - 23648341
Alignment:
Q  56 ttcaccttataagatgaataagtgggatgttcggagttcgaatctcaaatcctacatataataatacattgtcctaccaactg 138  Q
    |||||||| |||| | ||||||||  ||| |||||||||||| ||||| | || ||||||||||| |||||||||||||||||    
T  23648422 ttcaccttgtaaggtaaataagtgt-atgatcggagttcgaacctcaatttctgcatataataatgcattgtcctaccaactg 23648341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 56 - 138
Target Start/End: Original strand, 23810150 - 23810231
Alignment:
Q  56 ttcaccttataagatgaataagtgggatgttcggagttcgaatctcaaatcctacatataataatacattgtcctaccaactg 138  Q
    |||||||| |||| | ||||||||  ||| |||||||||||| ||||| | || ||||||||||| |||||||||||||||||    
T  23810150 ttcaccttgtaaggtaaataagtgt-atgatcggagttcgaacctcaatttctgcatataataatgcattgtcctaccaactg 23810231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 42 - 155
Target Start/End: Complemental strand, 8015943 - 8015830
Alignment:
Q  42 tctagtggctagatttcaccttataagatgaataagtgggatgttcggagttcgaatctcaaatcctacatataataatacattgtcctaccaactgatc 141  Q
    |||||||| |||| ||||||||||||| |||||||||||| ||| ||| ||||||| | |    ||| ||| ||||||| |||| ||||||| |||||      
T  8015943 tctagtgggtagaattcaccttataaggtgaataagtggggtgtccggggttcgaaccccggcccctgcatgtaataatgcattatcctaccgactgaga 8015844  T
Q  142 aatgctcacgggac 155  Q
     |||||||||||||    
T  8015843 tatgctcacgggac 8015830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 36 - 81
Target Start/End: Complemental strand, 9577407 - 9577362
Alignment:
Q  36 aggtagtctagtggctagatttcaccttataagatgaataagtggg 81  Q
    |||||| |||||||||||| ||||||||||||| ||||||||||||    
T  9577407 aggtagcctagtggctagaattcaccttataaggtgaataagtggg 9577362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 51 - 160
Target Start/End: Complemental strand, 13754105 - 13753996
Alignment:
Q  51 tagatttcaccttataagatgaataagtgggatgttcggagttcgaatctcaaatcctacatataataatacattgtcctaccaactgatcaatgctcac 150  Q
    |||| ||||||||||||||||||||| |||| ||| ||  |||||||  || |  ||| |||||||||||  |||||||||||||||||   ||| | ||    
T  13754105 tagaattcaccttataagatgaataaatggggtgtccgacgttcgaacatcgacccctgcatataataatgtattgtcctaccaactgagttatgtttac 13754006  T
Q  151 gggacacatt 160  Q
    ||||||||||    
T  13754005 gggacacatt 13753996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 62 - 155
Target Start/End: Original strand, 22599943 - 22600035
Alignment:
Q  62 ttataagatgaataagtgggatgttcggagttcgaatctcaaatcctacatataataatacattgtcctaccaactgatcaatgctcacgggac 155  Q
    ||||||| |||||||||||| |||  || |||| |||| |||  ||| ||||||||||| ||||||||||||||||||   |||||||||||||    
T  22599943 ttataaggtgaataagtggggtgtctggggttcaaatcccaac-cctgcatataataatgcattgtcctaccaactgagttatgctcacgggac 22600035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 36 - 85
Target Start/End: Original strand, 34921095 - 34921144
Alignment:
Q  36 aggtagtctagtggctagatttcaccttataagatgaataagtgggatgt 85  Q
    ||||| ||||||||||||| |||| |||||||| ||||||||||||||||    
T  34921095 aggtaatctagtggctagaattcaacttataaggtgaataagtgggatgt 34921144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 36 - 97
Target Start/End: Original strand, 38618662 - 38618723
Alignment:
Q  36 aggtagtctagtggctagatttcaccttataagatgaataagtgggatgttcggagttcgaa 97  Q
    |||||| ||||| |||||| ||||||||||||| |||||||||||| ||| ||| |||||||    
T  38618662 aggtagcctagttgctagaattcaccttataaggtgaataagtggggtgtccggggttcgaa 38618723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 43 - 156
Target Start/End: Original strand, 40339088 - 40339200
Alignment:
Q  43 ctagtggctagatttcaccttataagatgaataagtgggatgttcggagttcgaatctcaaatcctacatataataatacattgtcctaccaactgatca 142  Q
    |||||||||||| ||||||||||||| ||||||| | || ||| | | ||||||| | |    ||| ||||||||||| ||||||||||| |||||| |     
T  40339088 ctagtggctagaattcaccttataaggtgaataaattgggtgtccag-gttcgaaccccggcccctgcatataataatgcattgtcctactaactgagct 40339186  T
Q  143 atgctcacgggaca 156  Q
    ||||||||||||||    
T  40339187 atgctcacgggaca 40339200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 39 - 86
Target Start/End: Complemental strand, 22863878 - 22863831
Alignment:
Q  39 tagtctagtggctagatttcaccttataagatgaataagtgggatgtt 86  Q
    |||||||||||||| | || ||||||||||||||||||||| ||||||    
T  22863878 tagtctagtggctaaaattaaccttataagatgaataagtgagatgtt 22863831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 56 - 155
Target Start/End: Original strand, 42801442 - 42801541
Alignment:
Q  56 ttcaccttataagatgaataagtgggatgttcggagttcgaatctcaaatcctacatataataatacattgtcctaccaactgatcaatgctcacgggac 155  Q
    |||| ||||||||||||||||||| | ||| ||| ||||||| | | |  ||| ||||||||||| |||| || |||||||||| | ||| |||||||||    
T  42801442 ttcaacttataagatgaataagtgaggtgtccggggttcgaaccccgacccctgcatataataatgcattatcataccaactgagctatgatcacgggac 42801541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 43 - 86
Target Start/End: Complemental strand, 43166776 - 43166733
Alignment:
Q  43 ctagtggctagatttcaccttataagatgaataagtgggatgtt 86  Q
    |||||||||||| ||||||||||||| |||||||||||| ||||    
T  43166776 ctagtggctagaattcaccttataaggtgaataagtggggtgtt 43166733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 63 - 125
Target Start/End: Original strand, 28378073 - 28378135
Alignment:
Q  63 tataagatgaataagtgggatgttcggagttcgaatctcaaatcctacatataataatacatt 125  Q
    |||||| |||||||||||| ||||||| ||||||| | |||  ||||||||||||||| ||||    
T  28378073 tataaggtgaataagtggggtgttcggggttcgaaccccaacccctacatataataatgcatt 28378135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 37 - 153
Target Start/End: Complemental strand, 9963529 - 9963412
Alignment:
Q  37 ggtagtctagtggctagatttcaccttataagatgaataagtgggatgttcggagttcgaatctcaaatcctacatataataatacattgt-cctaccaa 135  Q
    ||||| ||||||| |||| ||||| ||||||| ||||||||||||  || || |||||||| | |||  ||| ||||||| ||| |||||| ||| ||||    
T  9963529 ggtagcctagtggttagaattcactttataaggtgaataagtggggggtccgaagttcgaaccccaacccctgcatataacaatgcattgtccctgccaa 9963430  T
Q  136 ctgatcaatgctcacggg 153  Q
    |||| | || ||||||||    
T  9963429 ctgagctatactcacggg 9963412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 110 - 155
Target Start/End: Complemental strand, 29050840 - 29050795
Alignment:
Q  110 catataataatacattgtcctaccaactgatcaatgctcacgggac 155  Q
    ||||||||||| |||||||||||||||||| | |||||| ||||||    
T  29050840 catataataatgcattgtcctaccaactgagctatgctcgcgggac 29050795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 65 - 150
Target Start/End: Complemental strand, 33599994 - 33599909
Alignment:
Q  65 taagatgaataagtgggatgttcggagttcgaatctcaaatcctacatataataatacattgtcctaccaactgatcaatgctcac 150  Q
    |||| |||||||||||||||| |||  |||||| | ||| ||||| |||||||||| |||  | || |||||||| ||||||||||    
T  33599994 taaggtgaataagtgggatgtccgggattcgaaccccaactcctatatataataatgcatgtttctgccaactgagcaatgctcac 33599909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 36 - 97
Target Start/End: Original strand, 36226116 - 36226177
Alignment:
Q  36 aggtagtctagtggctagatttcaccttataagatgaataagtgggatgttcggagttcgaa 97  Q
    |||||| |||||||||| | ||||||||||||||||||||| |||  ||| ||| |||||||    
T  36226116 aggtagcctagtggctataattcaccttataagatgaataaatggagtgtccggggttcgaa 36226177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 36 - 88
Target Start/End: Original strand, 555156 - 555208
Alignment:
Q  36 aggtagtctagtggctagatttcaccttataagatgaataagtgggatgttcg 88  Q
    |||||| ||| |||||||| ||| |||||||| |||||||| |||||||||||    
T  555156 aggtagcctaatggctagaattctccttataaaatgaataaatgggatgttcg 555208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 110 - 154
Target Start/End: Original strand, 7645157 - 7645201
Alignment:
Q  110 catataataatacattgtcctaccaactgatcaatgctcacggga 154  Q
    ||||||||||| |||||||||||||||| | | ||||||||||||    
T  7645157 catataataatgcattgtcctaccaactaagctatgctcacggga 7645201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 61; Significance: 4e-26; HSPs: 60)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 36 - 156
Target Start/End: Complemental strand, 33206871 - 33206751
Alignment:
Q  36 aggtagtctagtggctagatttcaccttataagatgaataagtgggatgttcggagttcgaatctcaaatcctacatataataatacattgtcctaccaa 135  Q
    |||||| |||||||||||| ||||||||||||| |||||||||||| ||| ||| ||||||| | ||   ||| ||||||||||| ||||||||||||||    
T  33206871 aggtagcctagtggctagaattcaccttataaggtgaataagtggggtgtccggggttcgaaccccagcccctgcatataataatgcattgtcctaccaa 33206772  T
Q  136 ctgatcaatgctcacgggaca 156  Q
    |||| | ||||||||||||||    
T  33206771 ctgagctatgctcacgggaca 33206751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 36 - 154
Target Start/End: Original strand, 13539945 - 13540063
Alignment:
Q  36 aggtagtctagtggctagatttcaccttataagatgaataagtgggatgttcggagttcgaatctcaaatcctacatataataatacattgtcctaccaa 135  Q
    |||||||||| |||||||| ||||||||||||| | |||||||||| ||| ||| ||||||| | |||  ||||||||||||||| ||||||||||||||    
T  13539945 aggtagtctaatggctagaattcaccttataaggtaaataagtggggtgtccggggttcgaaccccaacccctacatataataatgcattgtcctaccaa 13540044  T
Q  136 ctgatcaatgctcacggga 154  Q
    |||| | || |||||||||    
T  13540045 ctgagctatactcacggga 13540063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 43 - 155
Target Start/End: Complemental strand, 49639135 - 49639023
Alignment:
Q  43 ctagtggctagatttcaccttataagatgaataagtgggatgttcggagttcgaatctcaaatcctacatataataatacattgtcctaccaactgatca 142  Q
    |||||||||||| ||||||||| ||| |||||||||||| ||||||| ||||||| | |    ||||||||||||||| |||||||||||||||||| |     
T  49639135 ctagtggctagaattcaccttacaaggtgaataagtggggtgttcggggttcgaaccccggcccctacatataataatgcattgtcctaccaactgagct 49639036  T
Q  143 atgctcacgggac 155  Q
    |||||||||||||    
T  49639035 atgctcacgggac 49639023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 51 - 155
Target Start/End: Original strand, 16277947 - 16278051
Alignment:
Q  51 tagatttcaccttataagatgaataagtgggatgttcggagttcgaatctcaaatcctacatataataatacattgtcctaccaactgatcaatgctcac 150  Q
    |||| |||| |||||||| |||||||||||||||| ||||||||||||| | |  ||| ||||||||||| ||| |||||||||||||| | ||||||||    
T  16277947 tagaattcatcttataaggtgaataagtgggatgtccggagttcgaatcccgacccctgcatataataatgcatggtcctaccaactgagctatgctcac 16278046  T
Q  151 gggac 155  Q
    |||||    
T  16278047 gggac 16278051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 36 - 156
Target Start/End: Complemental strand, 35483383 - 35483263
Alignment:
Q  36 aggtagtctagtggctagatttcaccttataagatgaataagtgggatgttcggagttcgaatctcaaatcctacatataataatacattgtcctaccaa 135  Q
    ||||||||||||||||||| || |||||||||| |||||||||||| ||| |||  |||||| | | |  ||| ||||||||||| ||||||||||| ||    
T  35483383 aggtagtctagtggctagaatttaccttataaggtgaataagtggggtgtccgggattcgaaccccgacccctgcatataataatgcattgtcctactaa 35483284  T
Q  136 ctgatcaatgctcacgggaca 156  Q
    |||| | ||||||||||||||    
T  35483283 ctgagctatgctcacgggaca 35483263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 36 - 156
Target Start/End: Original strand, 42270994 - 42271114
Alignment:
Q  36 aggtagtctagtggctagatttcaccttataagatgaataagtgggatgttcggagttcgaatctcaaatcctacatataataatacattgtcctaccaa 135  Q
    |||||| ||||| |||||| ||||||||||||| ||||||||| || ||| ||||||||||| | |    ||| ||||||| ||| ||||||||||||||    
T  42270994 aggtagcctagtagctagaattcaccttataaggtgaataagtagggtgtccggagttcgaaccccggcccctgcatataacaatgcattgtcctaccaa 42271093  T
Q  136 ctgatcaatgctcacgggaca 156  Q
    |||| | ||||||||||||||    
T  42271094 ctgagctatgctcacgggaca 42271114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 36 - 156
Target Start/End: Original strand, 43566777 - 43566897
Alignment:
Q  36 aggtagtctagtggctagatttcaccttataagatgaataagtgggatgttcggagttcgaatctcaaatcctacatataataatacattgtcctaccaa 135  Q
    |||||| |||||||||||| ||||||||||||| |||||||||||| |||  |  ||||||| | | |  ||| ||||||||||| ||||||||||||||    
T  43566777 aggtagcctagtggctagaattcaccttataaggtgaataagtggggtgtctgaggttcgaaccccgacccctgcatataataatgcattgtcctaccaa 43566876  T
Q  136 ctgatcaatgctcacgggaca 156  Q
    |||| | ||| ||||||||||    
T  43566877 ctgagctatgttcacgggaca 43566897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 44 - 155
Target Start/End: Original strand, 20623766 - 20623877
Alignment:
Q  44 tagtggctagatttcaccttataagatgaataagtgggatgttcggagttcgaatctcaaatcctacatataataatacattgtcctaccaactgatcaa 143  Q
    ||||||||||| ||||||||||||| |||||||||||| ||| | ||||||||| |   |  ||||||||||||||| ||||||||||| ||||||   |    
T  20623766 tagtggctagaattcaccttataaggtgaataagtggggtgtcctgagttcgaaccctgatccctacatataataatgcattgtcctacaaactgagtta 20623865  T
Q  144 tgctcacgggac 155  Q
    ||||||||||||    
T  20623866 tgctcacgggac 20623877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 39 - 133
Target Start/End: Complemental strand, 31698644 - 31698550
Alignment:
Q  39 tagtctagtggctagatttcaccttataagatgaataagtgggatgttcggagttcgaatctcaaatcctacatataataatacattgtcctacc 133  Q
    |||||||||||||||| |||||||||||||||||||||||||| ||||||  ||||||| | |   |||| ||||||||||| |||| |||||||    
T  31698644 tagtctagtggctagaattcaccttataagatgaataagtggggtgttcgaggttcgaaccccggctcctgcatataataatgcattatcctacc 31698550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 36 - 97
Target Start/End: Complemental strand, 8175874 - 8175813
Alignment:
Q  36 aggtagtctagtggctagatttcaccttataagatgaataagtgggatgttcggagttcgaa 97  Q
    ||||||||| ||||||||| ||||||||||||| |||||||||||| |||||||||||||||    
T  8175874 aggtagtctggtggctagaattcaccttataaggtgaataagtggggtgttcggagttcgaa 8175813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 43 - 136
Target Start/End: Original strand, 13616062 - 13616155
Alignment:
Q  43 ctagtggctagatttcaccttataagatgaataagtgggatgttcggagttcgaatctcaaatcctacatataataatacattgtcctaccaac 136  Q
    |||||||||||| |||||||||||||||||||||||||| ||| ||  |||||||   | |  ||||||||||||||| |||||||||||||||    
T  13616062 ctagtggctagaattcaccttataagatgaataagtggggtgtccgaggttcgaactccgacccctacatataataatgcattgtcctaccaac 13616155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 44 - 152
Target Start/End: Complemental strand, 48173392 - 48173284
Alignment:
Q  44 tagtggctagatttcaccttataagatgaataagtgggatgttcggagttcgaatctcaaatcc-tacatataataatacattgtcctaccaactgatca 142  Q
    ||||||||||| ||||||||||||| |||||||||| | ||| ||| ||||||| ||| || || ||||||||||||| ||||||| |||||||||| |     
T  48173392 tagtggctagaattcaccttataaggtgaataagtgaggtgtccggggttcgaa-ctccaacccatacatataataatgcattgtcttaccaactgagct 48173294  T
Q  143 atgctcacgg 152  Q
    ||||||||||    
T  48173293 atgctcacgg 48173284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 38 - 139
Target Start/End: Complemental strand, 49146196 - 49146095
Alignment:
Q  38 gtagtctagtggctagatttcaccttataagatgaataagtgggatgttcggagttcgaatctcaaatcctacatataataatacattgtcctaccaact 137  Q
    ||||| ||||||||||| ||||||||||||  |||||||||||| ||| ||| ||||||| | | |  ||| ||||||||||| ||||||||||||||||    
T  49146196 gtagtttagtggctagaattcaccttataaagtgaataagtggggtgtccggggttcgaaccccgacccctgcatataataatgcattgtcctaccaact 49146097  T
Q  138 ga 139  Q
    ||    
T  49146096 ga 49146095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 36 - 157
Target Start/End: Complemental strand, 50724481 - 50724361
Alignment:
Q  36 aggtagtctagtggctagatttcaccttataagatgaataagtgggatgttcggagttcgaatctcaaatcctacatataataatacattgtcctaccaa 135  Q
    |||||| |||||||||||| ||||| || |||| |||||||||||| ||| ||  ||||||| | |||  ||| ||||||||||| |||||||| |||||    
T  50724481 aggtagcctagtggctagaattcactttttaaggtgaataagtggggtgtccgaggttcgaaccccaacccctgcatataataatgcattgtcc-accaa 50724383  T
Q  136 ctgatcaatgctcacgggacac 157  Q
    |||| | |||||||||||||||    
T  50724382 ctgagctatgctcacgggacac 50724361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 36 - 157
Target Start/End: Original strand, 50788367 - 50788487
Alignment:
Q  36 aggtagtctagtggctagatttcaccttataagatgaataagtgggatgttcggagttcgaatctcaaatcctacatataataatacattgtcctaccaa 135  Q
    |||||| |||||||||||| ||||| || |||| |||||||||||| ||| ||  ||||||| | |||  ||| ||||||||||| |||||||| |||||    
T  50788367 aggtagcctagtggctagaattcactttttaaggtgaataagtggggtgtccgaggttcgaaccccaacccctgcatataataatgcattgtcc-accaa 50788465  T
Q  136 ctgatcaatgctcacgggacac 157  Q
    |||| | |||||||||||||||    
T  50788466 ctgagctatgctcacgggacac 50788487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 44 - 156
Target Start/End: Original strand, 32508783 - 32508895
Alignment:
Q  44 tagtggctagatttcaccttataagatgaataagtgggatgttcggagttcgaatctcaaatcctacatataataatacattgtcctaccaactgatcaa 143  Q
    ||||||||||| ||||||||||||| |||||||||||| ||||||| ||||||| | | |  ||| ||||||||||| |||| ||||| |||||||   |    
T  32508783 tagtggctagaattcaccttataaggtgaataagtggggtgttcggggttcgaaccccgacccctgcatataataatgcattatcctatcaactgagtta 32508882  T
Q  144 tgctcacgggaca 156  Q
     ||||||||||||    
T  32508883 ggctcacgggaca 32508895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 36 - 156
Target Start/End: Complemental strand, 45713594 - 45713474
Alignment:
Q  36 aggtagtctagtggctagatttcaccttataagatgaataagtgggatgttcggagttcgaatctcaaatcctacatataataatacattgtcctaccaa 135  Q
    |||||| ||||| | |||| ||||||||||||| |||||||||||| ||| |||||||||||   |    ||||||||||||||| ||||||||||||||    
T  45713594 aggtagcctagtagttagaattcaccttataaggtgaataagtggggtgtccggagttcgaactccggcccctacatataataatgcattgtcctaccaa 45713495  T
Q  136 ctgatcaatgctcacgggaca 156  Q
    || |   ||||||||||||||    
T  45713494 ctaagttatgctcacgggaca 45713474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 44 - 155
Target Start/End: Complemental strand, 14417974 - 14417863
Alignment:
Q  44 tagtggctagatttcaccttataagatgaataagtgggatgttcggagttcgaatctcaaatcctacatataataatacattgtcctaccaactgatcaa 143  Q
    ||||||||||| ||||||||||||| |||||||||||| ||| ||| |||||||   ||   ||| ||||||||||| |||||||||||||| ||| | |    
T  14417974 tagtggctagaattcaccttataaggtgaataagtggggtgtccggggttcgaactccagcccctgcatataataatgcattgtcctaccaattgagcta 14417875  T
Q  144 tgctcacgggac 155  Q
    |||||| |||||    
T  14417874 tgctcatgggac 14417863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 36 - 153
Target Start/End: Complemental strand, 47191487 - 47191369
Alignment:
Q  36 aggtagtctagtggctagatttcaccttataagatgaataagtgggatgttcggagttcgaatctcaaatcctacatataataatacattgt-cctacca 134  Q
    |||||| |||||||||||| |||| |||||||| |||||||||||| ||||||| |||||||   ||   ||| ||||||||||| |||||| ||| |||    
T  47191487 aggtagcctagtggctagaattcatcttataaggtgaataagtggggtgttcggggttcgaactccagcccctgcatataataatgcattgtccctgcca 47191388  T
Q  135 actgatcaatgctcacggg 153  Q
    ||||| | |||||||||||    
T  47191387 actgagctatgctcacggg 47191369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 36 - 152
Target Start/End: Original strand, 335011 - 335127
Alignment:
Q  36 aggtagtctagtggctagatttcaccttataagatgaataagtgggatgttcggagttcgaatctcaaatcc-tacatataataatacattgtcctacca 134  Q
    ||||||| |||| |||||| ||||||||||||| |||||||||||| ||| | | ||||||| |||   ||| ||||||||||||| |||||||||||||    
T  335011 aggtagtttagtagctagaattcaccttataaggtgaataagtggggtgtccagggttcgaa-ctccggtccttacatataataatgcattgtcctacca 335109  T
Q  135 actgatcaatgctcacgg 152  Q
    ||| | | ||||||||||    
T  335110 actaagctatgctcacgg 335127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 39 - 139
Target Start/End: Original strand, 55195845 - 55195945
Alignment:
Q  39 tagtctagtggctagatttcaccttataagatgaataagtgggatgttcggagttcgaatctcaaatcctacatataataatacattgtcctaccaactg 138  Q
    ||||||| ||| || | ||||||||||||||||||||| || | |||||||||||||||   |||  ||||||||| ||||| |||||||||| ||||||    
T  55195845 tagtctaatggttataattcaccttataagatgaataaatgaggtgttcggagttcgaactccaacccctacatatgataatgcattgtcctatcaactg 55195944  T
Q  139 a 139  Q
    |    
T  55195945 a 55195945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 36 - 155
Target Start/End: Original strand, 13874815 - 13874933
Alignment:
Q  36 aggtagtctagtggctagatttcaccttataagatgaataagtgggatgttcggagttcgaatctcaaatcctacatataataatacattgtcctaccaa 135  Q
    ||||||||||||||||||| ||||||||||||| ||||||| ||||||||  ||  || ||| | | |  ||| ||||||||||| |||||||| |||||    
T  13874815 aggtagtctagtggctagaattcaccttataaggtgaataaatgggatgtctgggatttgaaccccgacccctgcatataataatgcattgtcc-accaa 13874913  T
Q  136 ctgatcaatgctcacgggac 155  Q
    |||| | ||| |||||||||    
T  13874914 ctgagctatgttcacgggac 13874933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 44 - 139
Target Start/End: Original strand, 36727452 - 36727546
Alignment:
Q  44 tagtggctagatttcaccttataagatgaataagtgggatgttcggagttcgaatctcaaatcctacatataataatacattgtcctaccaactga 139  Q
    ||||||||||| |||||||||||||||||||||||||| ||| ||  ||||||| | |  | | | ||||||||||| ||||||||||||||||||    
T  36727452 tagtggctagaattcaccttataagatgaataagtggggtgtccgaggttcgaa-ccccgaccttgcatataataatgcattgtcctaccaactga 36727546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 36 - 156
Target Start/End: Original strand, 54983686 - 54983810
Alignment:
Q  36 aggtagtctagtggctagatttcaccttataagatgaataagtgggatgttcggagttcgaatctcaaatcc----tacatataataatacattgtccta 131  Q
    ||||||| ||||||||||| ||||||||||||| ||||||| |||| ||| ||| ||||||| | | |  ||    || |||||||||| |||| |||||    
T  54983686 aggtagtttagtggctagaattcaccttataaggtgaataaatggggtgtccggggttcgaaccccgacccctgcatatatataataatgcattatccta 54983785  T
Q  132 ccaactgatcaatgctcacgggaca 156  Q
    |||||||| | ||||||||||||||    
T  54983786 ccaactgagctatgctcacgggaca 54983810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 43 - 132
Target Start/End: Complemental strand, 48558793 - 48558704
Alignment:
Q  43 ctagtggctagatttcaccttataagatgaataagtgggatgttcggagttcgaatctcaaatcc-tacatataataatacattgtcctac 132  Q
    |||||||||| | ||||||||||||  |||||||||||||||||||  ||||||| ||  ||||| |||||||||||||||||||| ||||    
T  48558793 ctagtggctataattcaccttataaagtgaataagtgggatgttcgaggttcgaa-ctttaatccatacatataataatacattgtactac 48558704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 46 - 139
Target Start/End: Complemental strand, 23820733 - 23820640
Alignment:
Q  46 gtggctagatttcaccttataagatgaataagtgggatgttcggagttcgaatctcaaatcctacatataataatacattgtcctaccaactga 139  Q
    ||||||||| |||||||||||||||||||||||||| |||  || |||||||   |    ||| ||||||||||| ||||||||||||||||||    
T  23820733 gtggctagaattcaccttataagatgaataagtggggtgtctggggttcgaactccggcccctgcatataataatgcattgtcctaccaactga 23820640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 70 - 139
Target Start/End: Complemental strand, 29507297 - 29507228
Alignment:
Q  70 tgaataagtgggatgttcggagttcgaatctcaaatcctacatataataatacattgtcctaccaactga 139  Q
    ||||||||||| ||||  |||||||||| | ||| |||| ||||||||||| ||||||||||||||||||    
T  29507297 tgaataagtggaatgtctggagttcgaaccacaactcctgcatataataatgcattgtcctaccaactga 29507228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 36 - 97
Target Start/End: Original strand, 46328905 - 46328966
Alignment:
Q  36 aggtagtctagtggctagatttcaccttataagatgaataagtgggatgttcggagttcgaa 97  Q
    |||||| |||||||||||| ||||||||||||| |||||||||||| ||| ||| |||||||    
T  46328905 aggtagcctagtggctagaattcaccttataaggtgaataagtggggtgtccggggttcgaa 46328966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 39 - 155
Target Start/End: Original strand, 16006490 - 16006606
Alignment:
Q  39 tagtctagtggctagatttcaccttataagatgaataagtgggatgttcggagttcgaatctcaaatcctacatataataatacattgtcctaccaactg 138  Q
    |||| |||||| |||| ||||||||||||| |||||||||||| |||  || ||||||| | | | || | ||||| ||||| |||||| ||||||||||    
T  16006490 tagtttagtggttagaattcaccttataaggtgaataagtggggtgtctggggttcgaaccccgactcttgcatattataatgcattgttctaccaactg 16006589  T
Q  139 atcaatgctcacgggac 155  Q
    |   |||||||||||||    
T  16006590 agttatgctcacgggac 16006606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 56 - 139
Target Start/End: Original strand, 4072734 - 4072817
Alignment:
Q  56 ttcaccttataagatgaataagtgggatgttcggagttcgaatctcaaatcctacatataataatacattgtcctaccaactga 139  Q
    ||||||||||||| |||||||| ||| ||| || ||||||||   | | |||| ||||||||||||||||||||| ||||||||    
T  4072734 ttcaccttataaggtgaataagaggggtgtccgaagttcgaactccgactcctgcatataataatacattgtcctcccaactga 4072817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 36 - 139
Target Start/End: Original strand, 28206518 - 28206621
Alignment:
Q  36 aggtagtctagtggctagatttcaccttataagatgaataagtgggatgttcggagttcgaatctcaaatcctacatataataatacattgtcctaccaa 135  Q
    |||||| ||||||| |||| ||||||||||||| |||||||||||||||| | | |||| || ||| |  | | |||||||||||   ||||||||||||    
T  28206518 aggtagcctagtggttagaattcaccttataaggtgaataagtgggatgtccagggttcaaacctcgacccgtgcatataataatgtcttgtcctaccaa 28206617  T
Q  136 ctga 139  Q
    ||||    
T  28206618 ctga 28206621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 108 - 155
Target Start/End: Complemental strand, 50720464 - 50720417
Alignment:
Q  108 tacatataataatacattgtcctaccaactgatcaatgctcacgggac 155  Q
    ||||||||||||| |||||||||||||||||| | |||||||||||||    
T  50720464 tacatataataatgcattgtcctaccaactgaactatgctcacgggac 50720417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 108 - 155
Target Start/End: Original strand, 50792384 - 50792431
Alignment:
Q  108 tacatataataatacattgtcctaccaactgatcaatgctcacgggac 155  Q
    ||||||||||||| |||||||||||||||||| | |||||||||||||    
T  50792384 tacatataataatgcattgtcctaccaactgaactatgctcacgggac 50792431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 38 - 139
Target Start/End: Complemental strand, 49019295 - 49019194
Alignment:
Q  38 gtagtctagtggctagatttcaccttataagatgaataagtgggatgttcggag-ttcgaatctcaaatcctacatataataatacattgtcctaccaac 136  Q
    |||||||||||| |||| ||||||||||||| |||||||||| | || || ||| |||||| | | |  ||||||||||||||| ||||||| |||||||    
T  49019295 gtagtctagtggttagaattcaccttataaggtgaataagtgcggtg-tctgagattcgaaccccgacccctacatataataatgcattgtcttaccaac 49019197  T
Q  137 tga 139  Q
    |||    
T  49019196 tga 49019194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 39 - 156
Target Start/End: Complemental strand, 53472736 - 53472618
Alignment:
Q  39 tagtctagtggctagatttcaccttataagatgaataagtgggatgttcggagttcgaatctcaaatc-ctacatataataatacattgtcctaccaact 137  Q
    |||| ||||||||||| ||||||||||||  |||||||||||| |||| ||||||| || | | |  | || ||||||||||| |||||||||||||| |    
T  53472736 tagtttagtggctagaattcaccttataaagtgaataagtggggtgtttggagttcaaaccccgatcctctccatataataatgcattgtcctaccaatt 53472637  T
Q  138 gatcaatgctcacgggaca 156  Q
     | | ||||||| ||||||    
T  53472636 aagctatgctcatgggaca 53472618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 43 - 132
Target Start/End: Complemental strand, 15498313 - 15498224
Alignment:
Q  43 ctagtggctagatttcaccttataagatgaataagtgggatgttcggagttcgaatctcaaatcctacatataataatacattgtcctac 132  Q
    |||||| ||||| ||||| ||||||||||||||||||| |||| ||| |||||||   |    ||||||||||||||| |||||||||||    
T  15498313 ctagtgtctagaattcacattataagatgaataagtggaatgtccggggttcgaactccggcccctacatataataatgcattgtcctac 15498224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 36 - 85
Target Start/End: Complemental strand, 24751554 - 24751505
Alignment:
Q  36 aggtagtctagtggctagatttcaccttataagatgaataagtgggatgt 85  Q
    |||||| |||||||||||| ||||||||||||| ||||||||| ||||||    
T  24751554 aggtagcctagtggctagaattcaccttataaggtgaataagttggatgt 24751505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 36 - 81
Target Start/End: Original strand, 34344759 - 34344804
Alignment:
Q  36 aggtagtctagtggctagatttcaccttataagatgaataagtggg 81  Q
    |||||| |||||||||||| ||||||||||||| ||||||||||||    
T  34344759 aggtagcctagtggctagaattcaccttataaggtgaataagtggg 34344804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 36 - 97
Target Start/End: Complemental strand, 35477845 - 35477784
Alignment:
Q  36 aggtagtctagtggctagatttcaccttataagatgaataagtgggatgttcggagttcgaa 97  Q
    |||||| ||| || ||||| ||||||||||||| |||||||||||| ||| |||||||||||    
T  35477845 aggtagcctaatgactagaattcaccttataaggtgaataagtggggtgtccggagttcgaa 35477784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 36 - 129
Target Start/End: Original strand, 36331707 - 36331800
Alignment:
Q  36 aggtagtctagtggctagatttcaccttataagatgaataagtgggatgttcggagttcgaatctcaaatcctacatataataatacattgtcc 129  Q
    ||||||||||||||||||| ||||| || |||  |||||||||||| ||| ||| ||||||| | | |  ||| ||||||||||| ||||||||    
T  36331707 aggtagtctagtggctagaattcactttttaaagtgaataagtggggtgtccggggttcgaaccccgacccctgcatataataatgcattgtcc 36331800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 44 - 149
Target Start/End: Original strand, 38682247 - 38682352
Alignment:
Q  44 tagtggctagatttcaccttataagatgaataagtgggatgttcggagttcgaatctcaaatcctacatataataatacattgtcctaccaactgatcaa 143  Q
    |||||| |||| ||||||||||||||||||||||  || ||| |||  |||||||| | |  ||| |||||||||||  ||||||||||||| ||| | |    
T  38682247 tagtggttagaattcaccttataagatgaataaggagggtgtccgggattcgaatcccgacccctgcatataataatgtattgtcctaccaaatgaacta 38682346  T
Q  144 tgctca 149  Q
    ||||||    
T  38682347 tgctca 38682352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 44 - 156
Target Start/End: Complemental strand, 34136867 - 34136757
Alignment:
Q  44 tagtggctagatttcaccttataagatgaataagtgggatgttcggagttcgaatctcaaatcctacatataataatacattgtcctaccaactgatcaa 143  Q
    ||||||||||| |||| |||| ||| |||| ||||||| ||  | ||||||||| | |||  ||||||||||||||| |||||| ||||||||||| | |    
T  34136867 tagtggctagaattcatcttacaaggtgaa-aagtggg-tggccagagttcgaaccccaacccctacatataataatgcattgttctaccaactgagcta 34136770  T
Q  144 tgctcacgggaca 156  Q
    ||||||| |||||    
T  34136769 tgctcacaggaca 34136757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 36 - 140
Target Start/End: Complemental strand, 37059561 - 37059457
Alignment:
Q  36 aggtagtctagtggctagatttcaccttataagatgaataagtgggatgttcggagttcgaatctcaaatcctacatataataatacattgtcctaccaa 135  Q
    ||||||| |||||| |||| |||| ||||||||||||||||||| | |||||||  ||||||   ||   ||| ||||||||||| |||| |||||||||    
T  37059561 aggtagtttagtggttagaattcatcttataagatgaataagtgaggtgttcgggattcgaactccagcccctgcatataataatgcattatcctaccaa 37059462  T
Q  136 ctgat 140  Q
     ||||    
T  37059461 gtgat 37059457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 56 - 156
Target Start/End: Complemental strand, 19540439 - 19540335
Alignment:
Q  56 ttcaccttataagatgaataagtggga----tgttcggagttcgaatctcaaatcctacatataataatacattgtcctaccaactgatcaatgctcacg 151  Q
    |||||||||||||||||||| || ||     ||||||| ||||||| | ||  |||| |||||||||||  ||||||||||||||||| | ||||||| |    
T  19540439 ttcaccttataagatgaataggtaggtgaggtgttcggggttcgaaccccagctcctgcatataataatgtattgtcctaccaactgagctatgctcatg 19540340  T
Q  152 ggaca 156  Q
    |||||    
T  19540339 ggaca 19540335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 105 - 156
Target Start/End: Complemental strand, 34503260 - 34503209
Alignment:
Q  105 tcctacatataataatacattgtcctaccaactgatcaatgctcacgggaca 156  Q
    |||| ||||||||||| |||||||||||||||||| | ||||||||| ||||    
T  34503260 tcctgcatataataatgcattgtcctaccaactgagctatgctcacgagaca 34503209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 36 - 79
Target Start/End: Original strand, 42909184 - 42909227
Alignment:
Q  36 aggtagtctagtggctagatttcaccttataagatgaataagtg 79  Q
    ||||||| ||||||||||| |||||||||||| |||||||||||    
T  42909184 aggtagtttagtggctagaattcaccttataaaatgaataagtg 42909227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 43 - 153
Target Start/End: Complemental strand, 43774292 - 43774181
Alignment:
Q  43 ctagtggctagatttcaccttataagatgaataagtgggatgttcggagttcgaatctcaaatcctacatataataatacattgt-cctaccaactgatc 141  Q
    |||||||||||| ||||||||||||| |||||||||||| |||  || ||||||| | | |  ||| ||||||| ||| |||||| ||| |||||||| |    
T  43774292 ctagtggctagaattcaccttataaggtgaataagtggggtgtctggggttcgaaccccgacccctgcatataacaatgcattgtccctgccaactgagc 43774193  T
Q  142 aatgctcacggg 153  Q
     || ||||||||    
T  43774192 tatactcacggg 43774181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 39 - 97
Target Start/End: Original strand, 14271911 - 14271969
Alignment:
Q  39 tagtctagtggctagatttcaccttataagatgaataagtgggatgttcggagttcgaa 97  Q
    ||||||| |||||||| ||||||||||||||||||||| || | ||| ||| |||||||    
T  14271911 tagtctaatggctagaattcaccttataagatgaataaatgaggtgtccggggttcgaa 14271969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 110 - 156
Target Start/End: Original strand, 24751315 - 24751361
Alignment:
Q  110 catataataatacattgtcctaccaactgatcaatgctcacgggaca 156  Q
    ||||||||||| ||||||||||| |||||| | ||||||||||||||    
T  24751315 catataataatgcattgtcctactaactgagctatgctcacgggaca 24751361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 39 - 97
Target Start/End: Original strand, 50144590 - 50144648
Alignment:
Q  39 tagtctagtggctagatttcaccttataagatgaataagtgggatgttcggagttcgaa 97  Q
    ||||||||||| |||| ||||||||||||| |||||||||||  ||| ||| |||||||    
T  50144590 tagtctagtgggtagaattcaccttataaggtgaataagtggagtgtccggggttcgaa 50144648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 36 - 154
Target Start/End: Complemental strand, 53870948 - 53870830
Alignment:
Q  36 aggtagtctagtggctagatttcaccttataagatgaataagtgggatgttcggagttcgaatctcaaatcctacatataataatacattgtcctaccaa 135  Q
    |||||| ||| || ||||| ||||||||||||  |||||||||||| ||| |||||||| |||  | |  ||| ||||| ||||| |||| || ||||||    
T  53870948 aggtagcctaatgactagaattcaccttataatgtgaataagtggggtgtccggagttctaattccgatccctgcatatcataatgcattatcttaccaa 53870849  T
Q  136 ctgatcaatgctcacggga 154  Q
    | || | ||||||||||||    
T  53870848 ccgagctatgctcacggga 53870830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 110 - 155
Target Start/End: Original strand, 17440020 - 17440065
Alignment:
Q  110 catataataatacattgtcctaccaactgatcaatgctcacgggac 155  Q
    ||||||||||| ||||||||||||||| || | |||||||||||||    
T  17440020 catataataatgcattgtcctaccaaccgagctatgctcacgggac 17440065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 48 - 97
Target Start/End: Complemental strand, 24537929 - 24537880
Alignment:
Q  48 ggctagatttcaccttataagatgaataagtgggatgttcggagttcgaa 97  Q
    ||||||| ||||||||||||| |||||||||||| ||| ||| |||||||    
T  24537929 ggctagaattcaccttataaggtgaataagtggggtgtccggggttcgaa 24537880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 36 - 97
Target Start/End: Complemental strand, 27066724 - 27066663
Alignment:
Q  36 aggtagtctagtggctagatttcaccttataagatgaataagtgggatgttcggagttcgaa 97  Q
    |||||| |||||| ||||| ||||||| ||||| |||||||||||| ||| ||| |||||||    
T  27066724 aggtagcctagtgactagaattcacctcataaggtgaataagtggggtgtccggggttcgaa 27066663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 37 - 78
Target Start/End: Original strand, 36256661 - 36256702
Alignment:
Q  37 ggtagtctagtggctagatttcaccttataagatgaataagt 78  Q
    ||||| |||||||||||| ||||||||||||| |||||||||    
T  36256661 ggtagcctagtggctagaattcaccttataaggtgaataagt 36256702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 36 - 97
Target Start/End: Complemental strand, 37279741 - 37279680
Alignment:
Q  36 aggtagtctagtggctagatttcaccttataagatgaataagtgggatgttcggagttcgaa 97  Q
    ||||||| ||||| ||| | ||||||||||||| |||||||||||| |||  ||||||||||    
T  37279741 aggtagtttagtgactataattcaccttataaggtgaataagtggggtgtctggagttcgaa 37279680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 110 - 151
Target Start/End: Complemental strand, 40786320 - 40786279
Alignment:
Q  110 catataataatacattgtcctaccaactgatcaatgctcacg 151  Q
    ||||||||||| |||||||||||||||||| | |||||||||    
T  40786320 catataataatgcattgtcctaccaactgagctatgctcacg 40786279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 36 - 97
Target Start/End: Original strand, 42832043 - 42832104
Alignment:
Q  36 aggtagtctagtggctagatttcaccttataagatgaataagtgggatgttcggagttcgaa 97  Q
    |||||| |||||||||||| ||||||||||||| ||||||| |||  ||| ||| |||||||    
T  42832043 aggtagcctagtggctagaattcaccttataaggtgaataaatggagtgtccggggttcgaa 42832104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 49 - 101
Target Start/End: Complemental strand, 8493330 - 8493278
Alignment:
Q  49 gctagatttcaccttataagatgaataagtgggatgttcggagttcgaatctc 101  Q
    |||||| |||||||| |||| |||||||||  | |||||||||||||||||||    
T  8493330 gctagaattcaccttttaaggtgaataagtaaggtgttcggagttcgaatctc 8493278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 59 - 135
Target Start/End: Original strand, 9167275 - 9167351
Alignment:
Q  59 accttataagatgaataagtgggatgttcggagttcgaatctcaaatcctacatataataatacattgtcctaccaa 135  Q
    |||||||||| ||||||| |||| ||| || |||||||| | | |  ||| |||||||||||||||||| |||||||    
T  9167275 accttataaggtgaataactggggtgtccgaagttcgaaccccgacccctgcatataataatacattgttctaccaa 9167351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 58; Significance: 2e-24; HSPs: 60)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 37 - 158
Target Start/End: Complemental strand, 42887267 - 42887146
Alignment:
Q  37 ggtagtctagtggctagatttcaccttataagatgaataagtgggatgttcggagttcgaatctcaaatcctacatataataatacattgtcctaccaac 136  Q
    |||||||||||||||||| ||||||||||||| | |||||||||| ||| ||| ||||||| ||||   ||| |||||||||||  |||||| |||||||    
T  42887267 ggtagtctagtggctagaattcaccttataaggtaaataagtggggtgtccggggttcgaacctcagcccctgcatataataatgaattgtcgtaccaac 42887168  T
Q  137 tgatcaatgctcacgggacaca 158  Q
    ||| | ||||||||||||||||    
T  42887167 tgagctatgctcacgggacaca 42887146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 36 - 155
Target Start/End: Original strand, 22706009 - 22706128
Alignment:
Q  36 aggtagtctagtggctagatttcaccttataagatgaataagtgggatgttcggagttcgaatctcaaatcctacatataataatacattgtcctaccaa 135  Q
    |||||| ||||| |||||| |||| |||||||| |||||||||||| ||| ||||||| ||| ||||   ||| ||||||||||||||||||||||||||    
T  22706009 aggtagcctagtagctagaattcatcttataaggtgaataagtggggtgtccggagtttgaacctcagcccctgcatataataatacattgtcctaccaa 22706108  T
Q  136 ctgatcaatgctcacgggac 155  Q
    |||| | ||| |||||||||    
T  22706109 ctgagctatgttcacgggac 22706128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 36 - 155
Target Start/End: Original strand, 45198079 - 45198198
Alignment:
Q  36 aggtagtctagtggctagatttcaccttataagatgaataagtgggatgttcggagttcgaatctcaaatcctacatataataatacattgtcctaccaa 135  Q
    |||||||||| |||||||| ||||||||||||| ||||||| |||| ||| ||| |||||||||||||   || ||||||||||| |||| |||||||||    
T  45198079 aggtagtctaatggctagaattcaccttataaggtgaataaatggggtgtccggggttcgaatctcaatcactgcatataataatgcattatcctaccaa 45198178  T
Q  136 ctgatcaatgctcacgggac 155  Q
    ||||   |||||||||||||    
T  45198179 ctgagttatgctcacgggac 45198198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 44 - 155
Target Start/End: Original strand, 29710090 - 29710200
Alignment:
Q  44 tagtggctagatttcaccttataagatgaataagtgggatgttcggagttcgaatctcaaatcctacatataataatacattgtcctaccaactgatcaa 143  Q
    ||||||||||| |||||||||||||||||||||||||  |||   ||||||||| ||||   ||||||||||||||| |||||||||||||||||| | |    
T  29710090 tagtggctagaattcaccttataagatgaataagtggagtgtctagagttcgaacctcagc-cctacatataataatgcattgtcctaccaactgagcta 29710188  T
Q  144 tgctcacgggac 155  Q
    | ||||||||||    
T  29710189 tactcacgggac 29710200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 36 - 155
Target Start/End: Complemental strand, 34948220 - 34948101
Alignment:
Q  36 aggtagtctagtggctagatttcaccttataagatgaataagtgggatgttcggagttcgaatctcaaatcctacatataataatacattgtcctaccaa 135  Q
    |||||| |||||||||||| ||||||||||||| |||||||||||| ||| ||| ||||||| |||     || ||||| ||||| ||||||||||||||    
T  34948220 aggtagcctagtggctagaattcaccttataaggtgaataagtggggtgtccggggttcgaacctcggccactgcatatgataatgcattgtcctaccaa 34948121  T
Q  136 ctgatcaatgctcacgggac 155  Q
    |||| | |||||||||||||    
T  34948120 ctgagctatgctcacgggac 34948101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 36 - 155
Target Start/End: Complemental strand, 38025455 - 38025336
Alignment:
Q  36 aggtagtctagtggctagatttcaccttataagatgaataagtgggatgttcggagttcgaatctcaaatcctacatataataatacattgtcctaccaa 135  Q
    |||||| |||||||||||  ||||||||||||||||||||||||| |||| ||  ||||||| | ||| |||| ||||||||||| |||||||||| |||    
T  38025455 aggtagcctagtggctaggattcaccttataagatgaataagtggaatgtccgaggttcgaaccccaactcctgcatataataatgcattgtcctatcaa 38025356  T
Q  136 ctgatcaatgctcacgggac 155  Q
     ||| | |||||||| ||||    
T  38025355 atgagctatgctcacaggac 38025336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 47 - 156
Target Start/End: Original strand, 7262990 - 7263099
Alignment:
Q  47 tggctagatttcaccttataagatgaataagtgggatgttcggagttcgaatctcaaatc-ctacatataataatacattgtcctaccaactgatcaatg 145  Q
    |||||||| ||||||||||||||||||||| | || ||||||| ||||||| ||| || | |||||||||||||| |||||||||||||||||| | ||     
T  7262990 tggctagaattcaccttataagatgaataaatagggtgttcggggttcgaa-ctccaacctctacatataataatgcattgtcctaccaactgagctata 7263088  T
Q  146 ctcacgggaca 156  Q
    |||||||||||    
T  7263089 ctcacgggaca 7263099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 38 - 155
Target Start/End: Original strand, 22965941 - 22966058
Alignment:
Q  38 gtagtctagtggctagatttcaccttataagatgaataagtgggatgttcggagttcgaatctcaaatcctacatataataatacattgtcctaccaact 137  Q
    |||||||||||| |||| ||||||||||||| |||||||||||| |||  || ||||||| |||    ||| ||||||||||| |||||||||||||| |    
T  22965941 gtagtctagtggttagaattcaccttataaggtgaataagtggggtgtctggggttcgaacctcggcccctgcatataataatgcattgtcctaccaatt 22966040  T
Q  138 gatcaatgctcacgggac 155  Q
    || | |||||||||||||    
T  22966041 gagctatgctcacgggac 22966058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 36 - 156
Target Start/End: Original strand, 38778660 - 38778780
Alignment:
Q  36 aggtagtctagtggctagatttcaccttataagatgaataagtgggatgttcggagttcgaatctcaaatcctacatataataatacattgtcctaccaa 135  Q
    ||||||| | ||||||||| ||||||||||||| | |||||||||||||| ||| ||| ||| |||    ||| ||||||||||| ||||||||||||||    
T  38778660 aggtagtttggtggctagagttcaccttataaggtaaataagtgggatgtccggggttagaacctcggcccctgcatataataatgcattgtcctaccaa 38778759  T
Q  136 ctgatcaatgctcacgggaca 156  Q
    ||||   ||||||||||||||    
T  38778760 ctgagatatgctcacgggaca 38778780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 44 - 139
Target Start/End: Complemental strand, 30152847 - 30152752
Alignment:
Q  44 tagtggctagatttcaccttataagatgaataagtgggatgttcggagttcgaatctcaaatcctacatataataatacattgtcctaccaactga 139  Q
    ||||||||||| |||| |||||||| |||||||||||| ||||||| ||||||| | | |  |||| |||||||||| ||||||||||||||||||    
T  30152847 tagtggctagaattcatcttataaggtgaataagtggggtgttcggggttcgaaccccgacccctatatataataatgcattgtcctaccaactga 30152752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 38 - 155
Target Start/End: Complemental strand, 22741317 - 22741198
Alignment:
Q  38 gtagtctagtggctagatttcaccttataagatgaataagtgggatgttcggagttcgaatctc--aaatcctacatataataatacattgtcctaccaa 135  Q
    ||||||||||||||||| |||||||||||||||||||||||||| ||| ||   |||||| | |   | | || ||||||||||| ||||||||||||||    
T  22741317 gtagtctagtggctagaattcaccttataagatgaataagtggggtgtccgagattcgaaccccctgactactgcatataataatgcattgtcctaccaa 22741218  T
Q  136 ctgatcaatgctcacgggac 155  Q
    | || | |||||||||||||    
T  22741217 ccgagctatgctcacgggac 22741198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 37 - 156
Target Start/End: Complemental strand, 30644282 - 30644163
Alignment:
Q  37 ggtagtctagtggctagatttcaccttataagatgaataagtgggatgttcggagttcgaatctcaaatcctacatataataatacattgtcctaccaac 136  Q
    ||||| |||||||||||| ||||||||||||| |||||||||||| |||  || |||||||   |    ||| ||||||||||| |||||||||||||||    
T  30644282 ggtagactagtggctagaattcaccttataaggtgaataagtggggtgtctggggttcgaacaccggcccctgcatataataatgcattgtcctaccaac 30644183  T
Q  137 tgatcaatgctcacgggaca 156  Q
    ||| | || |||||||||||    
T  30644182 tgagctatactcacgggaca 30644163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 45 - 139
Target Start/End: Complemental strand, 35368501 - 35368407
Alignment:
Q  45 agtggctagatttcaccttataagatgaataagtgggatgttcggagttcgaatctcaaatcctacatataataatacattgtcctaccaactga 139  Q
    |||||||||| ||||||||||||| ||||||| |||| ||| ||||||||||| | ||   |||| |||||||||| || |||||||||||||||    
T  35368501 agtggctagaattcaccttataaggtgaataaatggggtgtccggagttcgaaccacagcccctaaatataataatgcaatgtcctaccaactga 35368407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 36 - 97
Target Start/End: Original strand, 33202535 - 33202596
Alignment:
Q  36 aggtagtctagtggctagatttcaccttataagatgaataagtgggatgttcggagttcgaa 97  Q
    |||||| |||||||||||| |||||||||||||||||||||||||| ||| ||| |||||||    
T  33202535 aggtagcctagtggctagaattcaccttataagatgaataagtggggtgtccggggttcgaa 33202596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 36 - 89
Target Start/End: Original strand, 35890871 - 35890924
Alignment:
Q  36 aggtagtctagtggctagatttcaccttataagatgaataagtgggatgttcgg 89  Q
    ||||| ||||||||||||| |||||||||||||||||||||||||| |||||||    
T  35890871 aggtaatctagtggctagaattcaccttataagatgaataagtggggtgttcgg 35890924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 36 - 156
Target Start/End: Complemental strand, 2366471 - 2366351
Alignment:
Q  36 aggtagtctagtggctagatttcaccttataagatgaataagtgggatgttcggagttcgaatctcaaatcctacatataataatacattgtcctaccaa 135  Q
    |||||| ||| |||||||| ||||||||||||| |||||||||||| |||   ||||||||| | | |  ||| ||||||||||| |||||||||| |||    
T  2366471 aggtagcctaatggctagaattcaccttataaggtgaataagtggggtgtctagagttcgaaccccgacccctgcatataataatgcattgtcctatcaa 2366372  T
Q  136 ctgatcaatgctcacgggaca 156  Q
    ||||   || |||||||||||    
T  2366371 ctgagttatactcacgggaca 2366351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 41 - 149
Target Start/End: Complemental strand, 46716442 - 46716334
Alignment:
Q  41 gtctagtggctagatttcaccttataagatgaataagtgggatgttcggagttcgaatctcaaatcctacatataataatacattgtcctaccaactgat 140  Q
    |||||||||||| | ||||||||||||| | |||||||||| ||||| | ||||||| | | |   || ||||||||||| ||||||||||||||||||     
T  46716442 gtctagtggctataattcaccttataaggtaaataagtggggtgttcagggttcgaaccccgacctctgcatataataatgcattgtcctaccaactgag 46716343  T
Q  141 caatgctca 149  Q
    | |||||||    
T  46716342 ctatgctca 46716334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 36 - 139
Target Start/End: Complemental strand, 21086218 - 21086115
Alignment:
Q  36 aggtagtctagtggctagatttcaccttataagatgaataagtgggatgttcggagttcgaatctcaaatcctacatataataatacattgtcctaccaa 135  Q
    ||||| |||| |||||| | |||| |||||||| ||||||||| || ||| |||||||||||  || |  ||| ||||||||||| ||||||||||||||    
T  21086218 aggtaatctaatggctaaaattcatcttataaggtgaataagttgggtgtccggagttcgaacttcgatccctgcatataataatgcattgtcctaccaa 21086119  T
Q  136 ctga 139  Q
    ||||    
T  21086118 ctga 21086115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 36 - 155
Target Start/End: Complemental strand, 29779095 - 29778976
Alignment:
Q  36 aggtagtctagtggctagatttcaccttataagatgaataagtgggatgttcggagttcgaatctcaaatcctacatataataatacattgtcctaccaa 135  Q
    |||||| |||| ||||||| ||||||||||||| ||||||||||   | |||||||||||||   | |  ||| ||||||||||| |||| |||||||||    
T  29779095 aggtagcctagcggctagagttcaccttataaggtgaataagtgaagtattcggagttcgaactccgacccctgcatataataatgcattatcctaccaa 29778996  T
Q  136 ctgatcaatgctcacgggac 155  Q
     ||| | |||||||||||||    
T  29778995 ttgagctatgctcacgggac 29778976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 36 - 139
Target Start/End: Original strand, 46918937 - 46919040
Alignment:
Q  36 aggtagtctagtggctagatttcaccttataagatgaataagtgggatgttcggagttcgaatctcaaatcctacatataataatacattgtcctaccaa 135  Q
    ||||||||||||  ||| | |||| ||||||||||| ||||||||| ||| ||   |||||||| |||  ||||||||||||||||||||||| ||| ||    
T  46918937 aggtagtctagtaactaaaattcatcttataagatggataagtggggtgtccgagattcgaatcccaacccctacatataataatacattgtcttactaa 46919036  T
Q  136 ctga 139  Q
    ||||    
T  46919037 ctga 46919040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 36 - 151
Target Start/End: Complemental strand, 47552327 - 47552212
Alignment:
Q  36 aggtagtctagtggctagatttcaccttataagatgaataagtgggatgttcggagttcgaatctcaaatcctacatataataatacattgtcctaccaa 135  Q
    |||||| || ||||||||| ||||||||||||| ||||||||| || ||| ||| ||||||| | |    | | ||||||||||| ||||||||||||||    
T  47552327 aggtagcctggtggctagaattcaccttataaggtgaataagtagggtgtccggggttcgaaccccggcccttgcatataataatgcattgtcctaccaa 47552228  T
Q  136 ctgatcaatgctcacg 151  Q
    |||| | |||||||||    
T  47552227 ctgagctatgctcacg 47552212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 36 - 153
Target Start/End: Original strand, 21285334 - 21285452
Alignment:
Q  36 aggtagtctagtggctagatttcaccttataagatgaataagtgggatgttcggagttcgaatctcaaatcctacatataataatacattgt-cctacca 134  Q
    |||||| |||||||||||| ||||||||||||| |||||||||||| ||| ||| ||||||| | |    ||| ||||||| ||| |||||| ||| |||    
T  21285334 aggtagcctagtggctagaattcaccttataaggtgaataagtggggtgtccggggttcgaaccccggcccctgcatataacaatgcattgtccctgcca 21285433  T
Q  135 actgatcaatgctcacggg 153  Q
    ||||| | |||||||||||    
T  21285434 actgagctatgctcacggg 21285452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 70 - 155
Target Start/End: Original strand, 34961987 - 34962072
Alignment:
Q  70 tgaataagtgggatgttcggagttcgaatctcaaatcctacatataataatacattgtcctaccaactgatcaatgctcacgggac 155  Q
    |||||||||||||||| | | ||||||||| ||  | || ||||||||||| |||||||||||||||||| | |||||||| ||||    
T  34961987 tgaataagtgggatgtccagggttcgaatcccagctactgcatataataatgcattgtcctaccaactgagctatgctcacaggac 34962072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 38 - 154
Target Start/End: Complemental strand, 5787573 - 5787457
Alignment:
Q  38 gtagtctagtggctagatttcaccttataagatgaataagtgggatgttcggagttcgaatctcaaatcctacatataataatacattgtcctaccaact 137  Q
    |||| |||||| ||||| ||||||||||||| |||||||||||| |||| || |||| || | |    ||| ||||||||||| |||||||||||||| |    
T  5787573 gtagcctagtgactagaattcaccttataaggtgaataagtggggtgtttggggttcaaaccccggcccctgcatataataatgcattgtcctaccaatt 5787474  T
Q  138 gatcaatgctcacggga 154  Q
    || | || |||||||||    
T  5787473 gagctatactcacggga 5787457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 36 - 139
Target Start/End: Original strand, 14967614 - 14967718
Alignment:
Q  36 aggtagtctagtggctagatttcaccttataagatgaat-aagtgggatgttcggagttcgaatctcaaatcctacatataataatacattgtcctacca 134  Q
    ||||||||||||||||||| ||||||||||||| ||||| ||||| | |||  |  |||| || | | |  ||||||||||||||| |||||||||||||    
T  14967614 aggtagtctagtggctagaattcaccttataagttgaataaagtgaggtgtctgaggttcaaaccccgacccctacatataataatgcattgtcctacca 14967713  T
Q  135 actga 139  Q
    |||||    
T  14967714 actga 14967718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 36 - 139
Target Start/End: Original strand, 15397090 - 15397194
Alignment:
Q  36 aggtagtctagtggctagatttcaccttataagatgaat-aagtgggatgttcggagttcgaatctcaaatcctacatataataatacattgtcctacca 134  Q
    ||||||||||||||||||| ||||||||||||| ||||| ||||| | |||  |  |||| || | | |  ||||||||||||||| |||||||||||||    
T  15397090 aggtagtctagtggctagaattcaccttataagttgaataaagtgaggtgtctgaggttcaaaccccgacccctacatataataatgcattgtcctacca 15397189  T
Q  135 actga 139  Q
    |||||    
T  15397190 actga 15397194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 44 - 120
Target Start/End: Original strand, 43902525 - 43902601
Alignment:
Q  44 tagtggctagatttcaccttataagatgaataagtgggatgttcggagttcgaatctcaaatcctacatataataat 120  Q
    ||||||||||| ||||||||||||| |||||||||||| ||||||  |||||||   |||  |||||||||||||||    
T  43902525 tagtggctagaattcaccttataaggtgaataagtggggtgttcgtggttcgaactccaacccctacatataataat 43902601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 36 - 155
Target Start/End: Original strand, 46337848 - 46337968
Alignment:
Q  36 aggtagtctagtggctagatttcaccttataagatgaataagtggga-tgttcggagttcgaatctcaaatcctacatataataatacattgtcctacca 134  Q
    |||||| |||||||||||| ||||  ||||||| ||||||||||||  ||| | | ||||||| | | |  ||| ||||||||||| |||||||||||||    
T  46337848 aggtagcctagtggctagaattcaatttataaggtgaataagtgggggtgtccagggttcgaaccccgatccctgcatataataatgcattgtcctacca 46337947  T
Q  135 actgatcaatgctcacgggac 155  Q
    ||||| | ||| |||||||||    
T  46337948 actgaactatgttcacgggac 46337968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 38 - 97
Target Start/End: Original strand, 29658255 - 29658314
Alignment:
Q  38 gtagtctagtggctagatttcaccttataagatgaataagtgggatgttcggagttcgaa 97  Q
    |||| |||||||||||| ||||||||||||| |||||||||||| ||| ||| |||||||    
T  29658255 gtagcctagtggctagaattcaccttataaggtgaataagtggggtgtccggggttcgaa 29658314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 56 - 155
Target Start/End: Complemental strand, 31694164 - 31694066
Alignment:
Q  56 ttcaccttataagatgaataagtgggatgttcggagttcgaatctcaaatcctacatataataatacattgtcctaccaactgatcaatgctcacgggac 155  Q
    ||||||||||||  | |||||||||| ||| |||||||||||||||    ||| ||||||||||| |||||||| ||||||||| | ||| |||||||||    
T  31694164 ttcaccttataaagtaaataagtggggtgtccggagttcgaatctcgtcccctgcatataataatgcattgtcc-accaactgagctatgttcacgggac 31694066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 110 - 156
Target Start/End: Complemental strand, 49012438 - 49012392
Alignment:
Q  110 catataataatacattgtcctaccaactgatcaatgctcacgggaca 156  Q
    ||||||||||| |||||||||||||||||| | ||||||||||||||    
T  49012438 catataataatgcattgtcctaccaactgagctatgctcacgggaca 49012392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 110 - 155
Target Start/End: Complemental strand, 4818060 - 4818015
Alignment:
Q  110 catataataatacattgtcctaccaactgatcaatgctcacgggac 155  Q
    ||||||||||| |||||||||||||||||| | |||||||||||||    
T  4818060 catataataatgcattgtcctaccaactgagcgatgctcacgggac 4818015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 45 - 138
Target Start/End: Complemental strand, 7908814 - 7908722
Alignment:
Q  45 agtggctagatttcaccttataagatgaataagtgggatgttcggagttcgaatctcaaatcctacatataataatacattgtcctaccaactg 138  Q
    |||||||||| ||||||||||||| ||||||||| || |||| || ||||||| ||||    || ||||||||||| || ||||||||||||||    
T  7908814 agtggctagaattcaccttataaggtgaataagtagggtgtttggggttcgaacctcagcctctgcatataataatgca-tgtcctaccaactg 7908722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 111 - 156
Target Start/End: Complemental strand, 8195954 - 8195909
Alignment:
Q  111 atataataatacattgtcctaccaactgatcaatgctcacgggaca 156  Q
    |||||||||| |||||||||||||||||| | ||||||||||||||    
T  8195954 atataataatgcattgtcctaccaactgagctatgctcacgggaca 8195909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 36 - 81
Target Start/End: Complemental strand, 8214224 - 8214179
Alignment:
Q  36 aggtagtctagtggctagatttcaccttataagatgaataagtggg 81  Q
    |||||||||||||| |||| ||||||||||||| ||||||||||||    
T  8214224 aggtagtctagtggttagaattcaccttataaggtgaataagtggg 8214179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 36 - 154
Target Start/End: Original strand, 23470480 - 23470599
Alignment:
Q  36 aggtagtctagtggctagatttcaccttat--aagatgaataagtgggatgttcggagttcgaatctcaaatcctacatataataatacattgtcctacc 133  Q
    |||||||||||||| ||||  ||||||| |  ||||||||||| |||||||| ||| ||||||| ||| |  |||||||||||||||||||  || | ||    
T  23470480 aggtagtctagtggttagaactcacctttttcaagatgaataaatgggatgtccggggttcgaa-ctctagccctacatataataatacatgttcatgcc 23470578  T
Q  134 aactgatcaatgctcacggga 154  Q
    |||||| | ||||||| ||||    
T  23470579 aactgagctatgctcaaggga 23470599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 36 - 81
Target Start/End: Original strand, 27907877 - 27907922
Alignment:
Q  36 aggtagtctagtggctagatttcaccttataagatgaataagtggg 81  Q
    |||||| |||||||||| | ||||||||||||||||||||||||||    
T  27907877 aggtagcctagtggctaaaattcaccttataagatgaataagtggg 27907922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 40 - 97
Target Start/End: Complemental strand, 33555179 - 33555122
Alignment:
Q  40 agtctagtggctagatttcaccttataagatgaataagtgggatgttcggagttcgaa 97  Q
    ||||||||||||||| |||| ||||||||||||||||||||  ||| ||| |||||||    
T  33555179 agtctagtggctagaattcagcttataagatgaataagtggagtgtccggggttcgaa 33555122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 36 - 81
Target Start/End: Complemental strand, 38451977 - 38451932
Alignment:
Q  36 aggtagtctagtggctagatttcaccttataagatgaataagtggg 81  Q
    ||||||||||||||||||| ||||||||||||  ||||||||||||    
T  38451977 aggtagtctagtggctagaattcaccttataatgtgaataagtggg 38451932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 39 - 120
Target Start/End: Complemental strand, 44843802 - 44843722
Alignment:
Q  39 tagtctagtggctagatttcaccttataagatgaataagtgggatgttcggagttcgaatctcaaatcctacatataataat 120  Q
    ||||||||||| |||| ||||||||||||||||||||| |||| ||| ||| ||||||| | | |  |||||||||||||||    
T  44843802 tagtctagtggttagaattcaccttataagatgaataaatggggtgtccgg-gttcgaaccccgacccctacatataataat 44843722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 36 - 159
Target Start/End: Original strand, 4590592 - 4590710
Alignment:
Q  36 aggtagtctagtggctagat--ttcaccttataagatgaataagtgggatgttcggagttcgaatctcaaatcctacatataataatacattgtcctacc 133  Q
    |||||| ||||||||||||   |||||||||||||||||||||||| | ||| |||  |||||| |       || ||||||||||| ||||||||||||    
T  4590592 aggtagcctagtggctagaaaattcaccttataagatgaataagtgtggtgtccgggattcgaacc-------ctgcatataataatgcattgtcctacc 4590684  T
Q  134 aactgatcaatgctcacgggacacat 159  Q
    |||||| | ||||||||  |||||||    
T  4590685 aactgagctatgctcaccagacacat 4590710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 43 - 155
Target Start/End: Complemental strand, 21925582 - 21925470
Alignment:
Q  43 ctagtggctagatttcaccttataagatgaataagtgggatgttcggagttcgaatctcaaatcctacatataataatacattgtcctaccaactgatca 142  Q
    |||||||||||| |||| |||||||| |||||||||||||| | || ||||| || | | |    |  |||||||||| |||||||||||||| ||| |     
T  21925582 ctagtggctagaattcatcttataaggtgaataagtgggatatccgaagttcaaaccccgacctatgtatataataatgcattgtcctaccaattgagct 21925483  T
Q  143 atgctcacgggac 155  Q
    |||||||||||||    
T  21925482 atgctcacgggac 21925470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 51 - 155
Target Start/End: Original strand, 25086946 - 25087050
Alignment:
Q  51 tagatttcaccttataagatgaataagtgggatgttcggagttcgaatctcaaatcctacatataataatacattgtcctaccaactgatcaatgctcac 150  Q
    |||| ||||||||||||| |||||||||| | |||| |  ||||||||| |    |||| |||||||||| ||||||||||| |||| | | ||||||||    
T  25086946 tagaattcaccttataaggtgaataagtgaggtgtttgaggttcgaatcccggtccctatatataataatgcattgtcctacgaactaaactatgctcac 25087045  T
Q  151 gggac 155  Q
    |||||    
T  25087046 gggac 25087050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 39 - 79
Target Start/End: Original strand, 39969027 - 39969067
Alignment:
Q  39 tagtctagtggctagatttcaccttataagatgaataagtg 79  Q
    |||||||||||||||| |||| |||||||||||||||||||    
T  39969027 tagtctagtggctagaattcatcttataagatgaataagtg 39969067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 112 - 155
Target Start/End: Original strand, 13905483 - 13905526
Alignment:
Q  112 tataataatacattgtcctaccaactgatcaatgctcacgggac 155  Q
    |||||||||||||||||||||||||||| | ||| |||||||||    
T  13905483 tataataatacattgtcctaccaactgagctatgttcacgggac 13905526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 44 - 150
Target Start/End: Complemental strand, 22047626 - 22047520
Alignment:
Q  44 tagtggctagatttcaccttataagatgaataagtgggatgttcggagttcgaatctcaaatcc-tacatataataatacattgtcctaccaactgatca 142  Q
    ||||||||||| |||| |||||||| |||||||||||| ||| | || |||||| |  ||  || | ||||||||||| |||||||||||||||||| |     
T  22047626 tagtggctagaattcatcttataaggtgaataagtggggtgtccaga-ttcgaaccataaccccctgcatataataatgcattgtcctaccaactgagct 22047528  T
Q  143 atgctcac 150  Q
    ||||||||    
T  22047527 atgctcac 22047520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 36 - 98
Target Start/End: Complemental strand, 3595401 - 3595339
Alignment:
Q  36 aggtagtctagtggctagatttcaccttataagatgaataagtgggatgttcggagttcgaat 98  Q
    |||||| |||| | ||||| ||||||||||||| ||||||| |||| ||||||| ||||||||    
T  3595401 aggtagcctagagcctagaattcaccttataaggtgaataattggggtgttcggggttcgaat 3595339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 39 - 129
Target Start/End: Complemental strand, 22926352 - 22926263
Alignment:
Q  39 tagtctagtggctagatttcaccttataagatgaataagtgggatgttcggagttcgaatctcaaatcctacatataataatacattgtcc 129  Q
    |||||||||| ||||| ||||| || |||||||||||||  || ||||||||||||||| ||| | |||| ||||| | ||| ||||||||    
T  22926352 tagtctagtgactagaattcacttt-taagatgaataagcagggtgttcggagttcgaacctcgactcctgcatattacaatgcattgtcc 22926263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 39 - 81
Target Start/End: Original strand, 30604404 - 30604446
Alignment:
Q  39 tagtctagtggctagatttcaccttataagatgaataagtggg 81  Q
    |||||||||||||||| ||||||||||||| ||||||| ||||    
T  30604404 tagtctagtggctagaattcaccttataaggtgaataattggg 30604446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 110 - 156
Target Start/End: Original strand, 36316029 - 36316075
Alignment:
Q  110 catataataatacattgtcctaccaactgatcaatgctcacgggaca 156  Q
    ||||||||||| |||| ||||||||||||| | ||||||||||||||    
T  36316029 catataataatgcattatcctaccaactgagctatgctcacgggaca 36316075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 110 - 156
Target Start/End: Complemental strand, 45417513 - 45417467
Alignment:
Q  110 catataataatacattgtcctaccaactgatcaatgctcacgggaca 156  Q
    |||||||||||||||||| || |||||||| | ||||||||||||||    
T  45417513 catataataatacattgttctgccaactgagctatgctcacgggaca 45417467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 70 - 155
Target Start/End: Complemental strand, 1513567 - 1513482
Alignment:
Q  70 tgaataagtgggatgttcggagttcgaatctcaaatcctacatataataatacattgtcctaccaactgatcaatgctcacgggac 155  Q
    |||||||||||| ||||||| ||||||| |||||  ||||||||||| ||| |||   ||| |||||||||  |||||||| ||||    
T  1513567 tgaataagtggggtgttcggtgttcgaacctcaacccctacatataacaatgcatgtccctgccaactgatttatgctcacaggac 1513482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 36 - 97
Target Start/End: Original strand, 4042249 - 4042310
Alignment:
Q  36 aggtagtctagtggctagatttcaccttataagatgaataagtgggatgttcggagttcgaa 97  Q
    ||||||||||| | ||||| |||||||||||| |||||||||| || ||| || ||||||||    
T  4042249 aggtagtctagcgactagaattcaccttataaaatgaataagttgggtgtccgaagttcgaa 4042310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 36 - 93
Target Start/End: Original strand, 11680728 - 11680785
Alignment:
Q  36 aggtagtctagtggctagatttcaccttataagatgaataagtgggatgttcggagtt 93  Q
    ||||| ||||||||||||| ||||| ||||||| ||||||| |||| |||| ||||||    
T  11680728 aggtaatctagtggctagaattcacattataaggtgaataaatggggtgtttggagtt 11680785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 106 - 139
Target Start/End: Original strand, 31279357 - 31279390
Alignment:
Q  106 cctacatataataatacattgtcctaccaactga 139  Q
    ||||||||||||||| ||||||||||||||||||    
T  31279357 cctacatataataatgcattgtcctaccaactga 31279390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 106 - 139
Target Start/End: Complemental strand, 36176915 - 36176882
Alignment:
Q  106 cctacatataataatacattgtcctaccaactga 139  Q
    ||||||||||||||| ||||||||||||||||||    
T  36176915 cctacatataataatgcattgtcctaccaactga 36176882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 36 - 129
Target Start/End: Complemental strand, 42286438 - 42286345
Alignment:
Q  36 aggtagtctagtggctagatttcaccttataagatgaataagtgggatgttcggagttcgaatctcaaatcctacatataataatacattgtcc 129  Q
    ||||||| || ||| |||| ||||||||||||| | |||||||||| ||| ||| |||| || ||||   ||||||||||| ||| ||||||||    
T  42286438 aggtagtttattggttagaattcaccttataaggtaaataagtggggtgtccggtgttcaaacctcagcccctacatataacaatgcattgtcc 42286345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 110 - 155
Target Start/End: Original strand, 44437880 - 44437925
Alignment:
Q  110 catataataatacattgtcctaccaactgatcaatgctcacgggac 155  Q
    ||||||||||| ||||||||||| |||||| | |||||||||||||    
T  44437880 catataataatgcattgtcctactaactgagctatgctcacgggac 44437925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 36 - 76
Target Start/End: Complemental strand, 22043139 - 22043099
Alignment:
Q  36 aggtagtctagtggctagatttcaccttataagatgaataa 76  Q
    ||||||||||||||||| | ||||| |||||||||||||||    
T  22043139 aggtagtctagtggctaaaattcactttataagatgaataa 22043099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 44 - 80
Target Start/End: Original strand, 47403577 - 47403613
Alignment:
Q  44 tagtggctagatttcaccttataagatgaataagtgg 80  Q
    ||||||||||| ||||||||||||| |||||||||||    
T  47403577 tagtggctagaattcaccttataaggtgaataagtgg 47403613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 56; Significance: 4e-23; HSPs: 49)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 36 - 151
Target Start/End: Original strand, 12127890 - 12128005
Alignment:
Q  36 aggtagtctagtggctagatttcaccttataagatgaataagtgggatgttcggagttcgaatctcaaatcctacatataataatacattgtcctaccaa 135  Q
    ||||||||||||||||||| ||||||||||||| |||||||||||  ||| ||| ||||||||  | |  ||| ||||||||||| ||||||||||||||    
T  12127890 aggtagtctagtggctagaattcaccttataaggtgaataagtggcgtgtccggggttcgaattccgacccctgcatataataatgcattgtcctaccaa 12127989  T
Q  136 ctgatcaatgctcacg 151  Q
    |||| | |||||||||    
T  12127990 ctgagctatgctcacg 12128005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 45 - 151
Target Start/End: Original strand, 15288945 - 15289051
Alignment:
Q  45 agtggctagatttcaccttataagatgaataagtgggatgttcggagttcgaatctcaaatcctacatataataatacattgtcctaccaactgatcaat 144  Q
    |||||||||| |||||||||||||||||||||||||| |||  |||||||||| | ||   ||||||||||||||| || ||||||||||||||| | ||    
T  15288945 agtggctagaattcaccttataagatgaataagtggggtgtctggagttcgaaccccagcccctacatataataatgcaatgtcctaccaactgaactat 15289044  T
Q  145 gctcacg 151  Q
    |||||||    
T  15289045 gctcacg 15289051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 36 - 154
Target Start/End: Complemental strand, 35190877 - 35190759
Alignment:
Q  36 aggtagtctagtggctagatttcaccttataagatgaataagtgggatgttcggagttcgaatctcaaatcctacatataataatacattgtcctaccaa 135  Q
    ||||||||||||||||||| ||||||||||||| |||||||||||| ||||||| |||||||   | |  ||| ||||||||||| |||||| |||||||    
T  35190877 aggtagtctagtggctagaattcaccttataaggtgaataagtggggtgttcggggttcgaactccgacccctgcatataataatgcattgttctaccaa 35190778  T
Q  136 ctgatcaatgctcacggga 154  Q
    |||| | ||||||| ||||    
T  35190777 ctgagctatgctcatggga 35190759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 36 - 156
Target Start/End: Original strand, 22389731 - 22389851
Alignment:
Q  36 aggtagtctagtggctagatttcaccttataagatgaataagtgggatgttcggagttcgaatctcaaatcctacatataataatacattgtcctaccaa 135  Q
    ||||||||||| ||||||| ||||||||||||| |||||||||||| ||| |||  |||||| |   |  ||| ||||||||||| ||||||||||||||    
T  22389731 aggtagtctagcggctagaattcaccttataaggtgaataagtggggtgtccgggattcgaaccctgacccctgcatataataatgcattgtcctaccaa 22389830  T
Q  136 ctgatcaatgctcacgggaca 156  Q
    |||| | ||||||||||||||    
T  22389831 ctgagctatgctcacgggaca 22389851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 36 - 155
Target Start/End: Complemental strand, 30566172 - 30566053
Alignment:
Q  36 aggtagtctagtggctagatttcaccttataagatgaataagtgggatgttcggagttcgaatctcaaatcctacatataataatacattgtcctaccaa 135  Q
    |||||||||||||||| || ||||||||||||| |||||||||||| ||| ||| |||| ||  ||||   || ||||||||||| ||||||||||||||    
T  30566172 aggtagtctagtggctggaattcaccttataaggtgaataagtggggtgtccggggttcaaacttcaacctctgcatataataatgcattgtcctaccaa 30566073  T
Q  136 ctgatcaatgctcacgggac 155  Q
    ||||   |||||||||||||    
T  30566072 ctgagttatgctcacgggac 30566053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 43 - 156
Target Start/End: Complemental strand, 12089204 - 12089091
Alignment:
Q  43 ctagtggctagatttcaccttataagatgaataagtgggatgttcggagttcgaatctcaaatcctacatataataatacattgtcctaccaactgatca 142  Q
    |||||||||||| ||||||||||||| |||||||||||| ||| ||| |||||||   |    ||| ||||||||||| |||||||||||||||||| |     
T  12089204 ctagtggctagaattcaccttataaggtgaataagtggggtgtccggggttcgaactccggcccctgcatataataatgcattgtcctaccaactgagct 12089105  T
Q  143 atgctcacgggaca 156  Q
    ||||||||||||||    
T  12089104 atgctcacgggaca 12089091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 36 - 156
Target Start/End: Complemental strand, 22501133 - 22501012
Alignment:
Q  36 aggtagtctagtggctagatttcaccttataagatgaataagtgggatgttcggagttcgaatctc-aaatcctacatataataatacattgtcctacca 134  Q
    ||||||||||||||||||| ||||||||| ||| |||||||||||| |||||   ||||||||| |  |  ||| ||||||||||| |||||||||||||    
T  22501133 aggtagtctagtggctagaattcaccttacaaggtgaataagtggggtgttcttggttcgaatcccggacccctgcatataataatgcattgtcctacca 22501034  T
Q  135 actgatcaatgctcacgggaca 156  Q
    ||||| | ||||||| ||||||    
T  22501033 actgagctatgctcatgggaca 22501012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 38 - 155
Target Start/End: Complemental strand, 32057146 - 32057029
Alignment:
Q  38 gtagtctagtggctagatttcaccttataagatgaataagtgggatgttcggagttcgaatctcaaatcctacatataataatacattgtcctaccaact 137  Q
    ||||| |||||| |||| |||||||||||||||||||||||||||| |  || ||||||| ||| |   || ||||||||||| |||||||||| |||||    
T  32057146 gtagtttagtggttagaattcaccttataagatgaataagtgggatctctggggttcgaacctcgaccactgcatataataatgcattgtcctatcaact 32057047  T
Q  138 gatcaatgctcacgggac 155  Q
    || | |||||||||||||    
T  32057046 gagctatgctcacgggac 32057029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 36 - 156
Target Start/End: Original strand, 10377105 - 10377225
Alignment:
Q  36 aggtagtctagtggctagatttcaccttataagatgaataagtgggatgttcggagttcgaatctcaaatcctacatataataatacattgtcctaccaa 135  Q
    ||||||||||||||||||| |||| |||||||  |||||||||||| ||||||| ||||||| | |     || ||||||||||| ||||||||||||||    
T  10377105 aggtagtctagtggctagaattcatcttataacgtgaataagtggggtgttcggggttcgaaccccggcctctgcatataataatgcattgtcctaccaa 10377204  T
Q  136 ctgatcaatgctcacgggaca 156  Q
    |||| | || |||||||||||    
T  10377205 ctgagctatactcacgggaca 10377225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 39 - 139
Target Start/End: Original strand, 20716376 - 20716476
Alignment:
Q  39 tagtctagtggctagatttcaccttataagatgaataagtgggatgttcggagttcgaatctcaaatcctacatataataatacattgtcctaccaactg 138  Q
    ||||||| ||| |||| |||| ||||||||||||||||||||| | |  |||||||||||| | |  ||||||||||||||| |||||||||||||||||    
T  20716376 tagtctaatggttagaattcatcttataagatgaataagtggggtatctggagttcgaatcccgacccctacatataataatgcattgtcctaccaactg 20716475  T
Q  139 a 139  Q
    |    
T  20716476 a 20716476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 36 - 139
Target Start/End: Original strand, 18904664 - 18904767
Alignment:
Q  36 aggtagtctagtggctagatttcaccttataagatgaataagtgggatgttcggagttcgaatctcaaatcctacatataataatacattgtcctaccaa 135  Q
    |||||| |||||||||||| ||||||||||||| |||||||||||| ||| | ||||||||| | |    | ||||||||||||| ||||||||||||||    
T  18904664 aggtagcctagtggctagaattcaccttataaggtgaataagtggggtgtccagagttcgaaccccggcccatacatataataatgcattgtcctaccaa 18904763  T
Q  136 ctga 139  Q
    ||||    
T  18904764 ctga 18904767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 36 - 139
Target Start/End: Complemental strand, 19165464 - 19165362
Alignment:
Q  36 aggtagtctagtggctagatttcaccttataagatgaataagtgggatgttcggagttcgaatctcaaatcctacatataataatacattgtcctaccaa 135  Q
    |||||| |||||||||||| ||||||||||||| |||||||||||| || |||| ||||||| | |||   || ||||||||||| ||||||||||||||    
T  19165464 aggtagactagtggctagaattcaccttataaggtgaataagtggggtg-tcggggttcgaaccccaacctctgcatataataatgcattgtcctaccaa 19165366  T
Q  136 ctga 139  Q
    ||||    
T  19165365 ctga 19165362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 43 - 157
Target Start/End: Original strand, 9491723 - 9491837
Alignment:
Q  43 ctagtggctagatttcaccttataagatgaataagtgggatgttcggagttcgaatctcaaatcctacatataataatacattgtcctaccaactgatca 142  Q
    ||||||| |||| |||| |||||||| |||||||||||| ||| ||| ||||||| | |    ||||||||||||||| ||||||||||||||||||       
T  9491723 ctagtggttagaattcatcttataaggtgaataagtggggtgtccggggttcgaaccccggcccctacatataataatgcattgtcctaccaactgagtt 9491822  T
Q  143 atgctcacgggacac 157  Q
    |||||||||||||||    
T  9491823 atgctcacgggacac 9491837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 38 - 139
Target Start/End: Complemental strand, 9438414 - 9438313
Alignment:
Q  38 gtagtctagtggctagatttcaccttataagatgaataagtgggatgttcggagttcgaatctcaaatcctacatataataatacattgtcctaccaact 137  Q
    |||| ||||||| |||| ||||||||||||| ||||| |||||| ||| ||| ||||||| | |||  ||| ||||||||||| ||||||||||||||||    
T  9438414 gtagcctagtggttagaattcaccttataaggtgaatgagtggggtgtccggggttcgaaccccaacccctgcatataataatgcattgtcctaccaact 9438315  T
Q  138 ga 139  Q
    ||    
T  9438314 ga 9438313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 43 - 155
Target Start/End: Complemental strand, 19417929 - 19417817
Alignment:
Q  43 ctagtggctagatttcaccttataagatgaataagtgggatgttcggagttcgaatctcaaatcctacatataataatacattgtcctaccaactgatca 142  Q
    |||||| ||||| |||||||||||||||||||||||||| |||  ||  |||||||| | |  ||| |||||||||||||||| |||||||||| || |     
T  19417929 ctagtgactagaattcaccttataagatgaataagtggggtgtctgggattcgaatcccgatccctgcatataataatacattatcctaccaacagagct 19417830  T
Q  143 atgctcacgggac 155  Q
    ||||| |||||||    
T  19417829 atgcttacgggac 19417817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 44 - 156
Target Start/End: Complemental strand, 34365841 - 34365729
Alignment:
Q  44 tagtggctagatttcaccttataagatgaataagtgggatgttcggagttcgaatctcaaatcctacatataataatacattgtcctaccaactgatcaa 143  Q
    ||||||||||| ||||| |||||||||||||||||||  ||||||  ||||||| | |    ||| || |||||||| |||||||||||||||||| | |    
T  34365841 tagtggctagaattcactttataagatgaataagtggagtgttcgaggttcgaaccccggcccctgcacataataatgcattgtcctaccaactgaacta 34365742  T
Q  144 tgctcacgggaca 156  Q
    |||||||||||||    
T  34365741 tgctcacgggaca 34365729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 48 - 139
Target Start/End: Original strand, 6025380 - 6025470
Alignment:
Q  48 ggctagatttcaccttataagatgaataagtgggatgttcggagttcgaatctcaaatcctacatataataatacattgtcctaccaactga 139  Q
    ||||||| ||||||||||||||||||||||| |||||| ||| ||||||||| | |  ||| ||||||||||| |||| |||||||||||||    
T  6025380 ggctagaattcaccttataagatgaataagt-ggatgtccggggttcgaatcccgacccctgcatataataatgcattatcctaccaactga 6025470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 36 - 155
Target Start/End: Original strand, 7563557 - 7563676
Alignment:
Q  36 aggtagtctagtggctagatttcaccttataagatgaataagtgggatgttcggagttcgaatctcaaatcctacatataataatacattgtcctaccaa 135  Q
    ||||||| ||||||||| | ||||||||||||| |||||||||||| ||| ||| ||| ||| |   |  ||| ||| ||||||| ||||||||||||||    
T  7563557 aggtagtttagtggctaaaattcaccttataaggtgaataagtggggtgtccggggtttgaaccctgacccctgcatgtaataatgcattgtcctaccaa 7563656  T
Q  136 ctgatcaatgctcacgggac 155  Q
    |||| | |||||||||||||    
T  7563657 ctgagctatgctcacgggac 7563676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 44 - 155
Target Start/End: Complemental strand, 18631578 - 18631467
Alignment:
Q  44 tagtggctagatttcaccttataagatgaataagtgggatgttcggagttcgaatctcaaatcctacatataataatacattgtcctaccaactgatcaa 143  Q
    ||||||||||| ||||||||||||  |||||||||||| | || || ||||||||| | |  ||| ||||||| |||  ||||||||||||||||| | |    
T  18631578 tagtggctagaattcaccttataaagtgaataagtggggtatttggggttcgaatcccgacccctgcatataacaatgtattgtcctaccaactgagcta 18631479  T
Q  144 tgctcacgggac 155  Q
    ||||||| ||||    
T  18631478 tgctcacaggac 18631467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 44 - 131
Target Start/End: Complemental strand, 22983686 - 22983599
Alignment:
Q  44 tagtggctagatttcaccttataagatgaataagtgggatgttcggagttcgaatctcaaatcctacatataataatacattgtccta 131  Q
    |||||| |||| |||||||||||||||||||||||||| ||| ||| ||||||| | |    ||| ||||||||||||||||||||||    
T  22983686 tagtggttagaattcaccttataagatgaataagtggggtgtccggggttcgaaccccggcccctgcatataataatacattgtccta 22983599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 44 - 131
Target Start/End: Original strand, 23804722 - 23804809
Alignment:
Q  44 tagtggctagatttcaccttataagatgaataagtgggatgttcggagttcgaatctcaaatcctacatataataatacattgtccta 131  Q
    |||||| |||| |||||||||||||||||||||||||| ||| ||| ||||||| | |    ||| ||||||||||||||||||||||    
T  23804722 tagtggttagaattcaccttataagatgaataagtggggtgtccggggttcgaaccccggcccctgcatataataatacattgtccta 23804809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 51 - 149
Target Start/End: Original strand, 31741459 - 31741557
Alignment:
Q  51 tagatttcaccttataagatgaataagtgggatgttcggagttcgaatctcaaatcc-tacatataataatacattgtcctaccaactgatcaatgctca 149  Q
    |||| |||| |||||||| ||||||| |||||||| || | |||||| ||| ||||| ||||||||||||| |||||||||||||||||| | |||||||    
T  31741459 tagaattcatcttataaggtgaataaatgggatgtccgaaattcgaa-ctccaatccctacatataataatgcattgtcctaccaactgagctatgctca 31741557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 36 - 155
Target Start/End: Complemental strand, 34396197 - 34396078
Alignment:
Q  36 aggtagtctagtggctagatttcaccttataagatgaataagtgggatgttcggagttcgaatctcaaatcctacatataataatacattgtcctaccaa 135  Q
    |||||||||| ||| |||| ||||||||||||| ||||||| | || ||| |||||||||||   |    ||| ||||||||||| ||||||| ||||||    
T  34396197 aggtagtctattggttagaattcaccttataaggtgaataaatagggtgtccggagttcgaactccggcccctgcatataataatgcattgtcgtaccaa 34396098  T
Q  136 ctgatcaatgctcacgggac 155  Q
    |||| | |||||||||||||    
T  34396097 ctgaactatgctcacgggac 34396078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 45 - 155
Target Start/End: Original strand, 21507192 - 21507301
Alignment:
Q  45 agtggctagatttcaccttataagatgaataagtgggatgttcggagttcgaatctcaaatcctacatataataatacattgtcctaccaactgatcaat 144  Q
    |||||||||| ||||| ||||||  |||||||||||| ||| |||||||| ||   | |  ||| |||||||||||||||||||||||||||| | | ||    
T  21507192 agtggctagaattcac-ttataaagtgaataagtggggtgtccggagttcaaactccgacccctgcatataataatacattgtcctaccaactaagctat 21507290  T
Q  145 gctcacgggac 155  Q
    |||||||||||    
T  21507291 gctcacgggac 21507301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 36 - 97
Target Start/End: Complemental strand, 3448466 - 3448405
Alignment:
Q  36 aggtagtctagtggctagatttcaccttataagatgaataagtgggatgttcggagttcgaa 97  Q
    |||||| ||| |||||||| |||||||||||||||||||||||||| ||| ||| |||||||    
T  3448466 aggtagcctattggctagaattcaccttataagatgaataagtggggtgtccggggttcgaa 3448405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 36 - 97
Target Start/End: Original strand, 16251504 - 16251565
Alignment:
Q  36 aggtagtctagtggctagatttcaccttataagatgaataagtgggatgttcggagttcgaa 97  Q
    |||||| |||||| ||||| ||||||||||||| |||||||||||| ||| |||||||||||    
T  16251504 aggtagcctagtgactagaattcaccttataaggtgaataagtggggtgtccggagttcgaa 16251565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 59 - 156
Target Start/End: Original strand, 16269721 - 16269818
Alignment:
Q  59 accttataagatgaataagtgggatgttcggagttcgaatctcaaatcctacatataataatacattgtcctaccaactgatcaatgctcacgggaca 156  Q
    |||||||||| ||||||||||||  |||||| ||||||  |||||  ||| ||||||||||| || |||||||||||| || | ||||||||| ||||    
T  16269721 accttataaggtgaataagtggggcgttcggggttcgatcctcaacccctgcatataataatgcactgtcctaccaaccgagctatgctcacgagaca 16269818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 36 - 97
Target Start/End: Original strand, 25020509 - 25020570
Alignment:
Q  36 aggtagtctagtggctagatttcaccttataagatgaataagtgggatgttcggagttcgaa 97  Q
    |||||| |||||||||||| ||||||||||||| |||||||||||| ||| ||| |||||||    
T  25020509 aggtagcctagtggctagaattcaccttataaggtgaataagtggggtgtccggggttcgaa 25020570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 44 - 152
Target Start/End: Original strand, 5288334 - 5288442
Alignment:
Q  44 tagtggctagatttcaccttataagatgaataagtgggatgttcggagttcgaatctcaaatcctacatataataatacattgtcctaccaactgatcaa 143  Q
    |||| |||||| ||||||||||||| ||||||| || | ||| ||||||||| | | | |  ||| ||||||||||| ||||||||||||||||||   |    
T  5288334 tagtagctagaattcaccttataaggtgaataattgaggtgtccggagttcggaccccgacccctgcatataataatgcattgtcctaccaactgagtta 5288433  T
Q  144 tgctcacgg 152  Q
    |||||||||    
T  5288434 tgctcacgg 5288442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 36 - 135
Target Start/End: Original strand, 753293 - 753392
Alignment:
Q  36 aggtagtctagtggctagatttcaccttataagatgaataagtgggatgttcggagttcgaatctcaaatcctacatataataatacattgtcctaccaa 135  Q
    |||||||||||| |||||| |||| ||||||||  ||||||||||| ||| | | ||||||| | | |  |||||||||||||||  |||||||||||||    
T  753293 aggtagtctagtagctagaattcatcttataaggggaataagtggggtgtccagggttcgaaccccgacccctacatataataatgtattgtcctaccaa 753392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 38 - 81
Target Start/End: Original strand, 6530187 - 6530230
Alignment:
Q  38 gtagtctagtggctagatttcaccttataagatgaataagtggg 81  Q
    ||||||||||||||||| ||||||||||||| ||||||||||||    
T  6530187 gtagtctagtggctagaattcaccttataaggtgaataagtggg 6530230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 36 - 155
Target Start/End: Complemental strand, 8233200 - 8233081
Alignment:
Q  36 aggtagtctagtggctagatttcaccttataagatgaataagtgggatgttcggagttcgaatctcaaatcctacatataataatacattgtcctaccaa 135  Q
    |||| ||||| |||||||| ||||| ||||||| |||||||||  | ||||||||||||||| |   |   ||  ||||||||||  |||||||||||||    
T  8233200 aggtggtctattggctagaattcacattataaggtgaataagtaaggtgttcggagttcgaaccctgacctctgtatataataatgtattgtcctaccaa 8233101  T
Q  136 ctgatcaatgctcacgggac 155  Q
    |||| | |||||||||||||    
T  8233100 ctgagctatgctcacgggac 8233081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 36 - 135
Target Start/End: Complemental strand, 23771147 - 23771048
Alignment:
Q  36 aggtagtctagtggctagatttcaccttataagatgaataagtgggatgttcggagttcgaatctcaaatcctacatataataatacattgtcctaccaa 135  Q
    ||||||||||||||| ||| |||||||||||   ||||||| |||| ||| ||||||||||| | |    ||| ||||||||||| ||||||||||||||    
T  23771147 aggtagtctagtggcaagaattcaccttatagagtgaataaatggggtgtccggagttcgaaccccttcccctgcatataataatgcattgtcctaccaa 23771048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 36 - 81
Target Start/End: Original strand, 5134415 - 5134460
Alignment:
Q  36 aggtagtctagtggctagatttcaccttataagatgaataagtggg 81  Q
    |||||| |||||||||||| ||||||||||||| ||||||||||||    
T  5134415 aggtagcctagtggctagaattcaccttataaggtgaataagtggg 5134460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 36 - 81
Target Start/End: Original strand, 5678198 - 5678243
Alignment:
Q  36 aggtagtctagtggctagatttcaccttataagatgaataagtggg 81  Q
    |||||||||||||| |||| ||||||||||||| ||||||||||||    
T  5678198 aggtagtctagtggatagaattcaccttataaggtgaataagtggg 5678243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 43 - 132
Target Start/End: Original strand, 6270597 - 6270686
Alignment:
Q  43 ctagtggctagatttcaccttataagatgaataagtgggatgttcggagttcgaatctcaaatcctacatataataatacattgtcctac 132  Q
    |||||||||||| ||||||||||||| ||||||| |||| ||||| | ||||||| | |    ||| |||||||||||| ||||||||||    
T  6270597 ctagtggctagaattcaccttataaggtgaataattggggtgttcagggttcgaaccccggcccctgcatataataatatattgtcctac 6270686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 36 - 137
Target Start/End: Complemental strand, 6652323 - 6652223
Alignment:
Q  36 aggtagtctagtggctagatttcaccttataagatgaataagtgggatgttcggagttcgaatctcaaatcctacatataataatacattgtcctaccaa 135  Q
    |||||| |||||||||| | ||||| ||||||| ||||||| |||| |||  |||||||||| | | || ||| |||| |||||| ||||||||||||||    
T  6652323 aggtagcctagtggctataattcactttataaggtgaataaatggggtgtctggagttcgaacc-ctaaccctgcataaaataatgcattgtcctaccaa 6652225  T
Q  136 ct 137  Q
    ||    
T  6652224 ct 6652223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 38 - 139
Target Start/End: Complemental strand, 7709996 - 7709896
Alignment:
Q  38 gtagtctagtggctagatttcaccttataagatgaataagtgggatgttcggagttcgaatctcaaatcctacatataataatacattgtcctaccaact 137  Q
    ||||| |||||| |||| ||||||||||||| ||||||||||||||| || ||||||||||  | |  ||||||||| ||||| ||||  |||| |||||    
T  7709996 gtagtttagtggatagaattcaccttataaggtgaataagtgggatg-tccgagttcgaattccgatgcctacatatgataatgcattaccctatcaact 7709898  T
Q  138 ga 139  Q
    ||    
T  7709897 ga 7709896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 110 - 155
Target Start/End: Original strand, 19642602 - 19642647
Alignment:
Q  110 catataataatacattgtcctaccaactgatcaatgctcacgggac 155  Q
    ||||||||||| |||||||||||||||||| | |||||||||||||    
T  19642602 catataataatgcattgtcctaccaactgagctatgctcacgggac 19642647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 40 - 155
Target Start/End: Complemental strand, 16801899 - 16801784
Alignment:
Q  40 agtctagtggctagatttcaccttataagatgaataagtgggatgttcggagttcgaatctcaaatcctacatataataatacattgtcctaccaactga 139  Q
    ||||||| || |||| || | |||| ||| |||||||||||  ||| |||| |||||| | | | |||| |||||||||||   ||||||||||||||||    
T  16801899 agtctagaggttagaatttatcttacaaggtgaataagtggtgtgtccggaattcgaaccccgactcctgcatataataatgttttgtcctaccaactga 16801800  T
Q  140 tcaatgctcacgggac 155  Q
     | |||||||||||||    
T  16801799 gctatgctcacgggac 16801784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 110 - 156
Target Start/End: Complemental strand, 7303832 - 7303786
Alignment:
Q  110 catataataatacattgtcctaccaactgatcaatgctcacgggaca 156  Q
    |||||||||||| |||||||||||||||||   ||||||||||||||    
T  7303832 catataataatatattgtcctaccaactgagttatgctcacgggaca 7303786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 47 - 89
Target Start/End: Complemental strand, 7303920 - 7303878
Alignment:
Q  47 tggctagatttcaccttataagatgaataagtgggatgttcgg 89  Q
    |||||| | |||||||||||||||||||||||| |||||||||    
T  7303920 tggctaaaattcaccttataagatgaataagtgagatgttcgg 7303878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 106 - 156
Target Start/End: Complemental strand, 18991528 - 18991478
Alignment:
Q  106 cctacatataataatacattgtcctaccaactgatcaatgctcacgggaca 156  Q
    ||||||||||||||| ||||||| |||||||||| | |||||| |||||||    
T  18991528 cctacatataataatgcattgtcttaccaactgagctatgctcgcgggaca 18991478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 70 - 139
Target Start/End: Complemental strand, 29284198 - 29284128
Alignment:
Q  70 tgaataagtgggatgttcggagttcgaatctcaaatcctacatataataatacattg-tcctaccaactga 139  Q
    |||||||||||| ||| ||| ||||||| | | |  ||||||||||||||||||||| |||||||||||||    
T  29284198 tgaataagtggggtgtccggggttcgaaccccgatccctacatataataatacattgttcctaccaactga 29284128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 36 - 97
Target Start/End: Original strand, 7720484 - 7720545
Alignment:
Q  36 aggtagtctagtggctagatttcaccttataagatgaataagtgggatgttcggagttcgaa 97  Q
    |||||| |||| ||||||| | ||||||||||| |||||||||||| ||| ||| |||||||    
T  7720484 aggtagcctagcggctagaatccaccttataaggtgaataagtggggtgtccggggttcgaa 7720545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 110 - 155
Target Start/End: Original strand, 17419752 - 17419797
Alignment:
Q  110 catataataatacattgtcctaccaactgatcaatgctcacgggac 155  Q
    |||||||||||| |||||||||| |||||| | |||||||||||||    
T  17419752 catataataatatattgtcctactaactgagctatgctcacgggac 17419797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 42 - 151
Target Start/End: Complemental strand, 22850919 - 22850810
Alignment:
Q  42 tctagtggctagatttcaccttataagatgaataagtgggatgttcggagttcgaatctcaaatcctacatataataatacattgtcctaccaactgatc 141  Q
    |||| |||||||| |||| |||||||| || |||| |||| |||||||  |||||| | |||  ||| |||||||||||  ||| |||||| |||||| |    
T  22850919 tctaatggctagaattcatcttataaggtgtataaatggggtgttcgggcttcgaaccccaacccctgcatataataatgtattttcctactaactgagc 22850820  T
Q  142 aatgctcacg 151  Q
     |||||||||    
T  22850819 tatgctcacg 22850810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 38 - 86
Target Start/End: Original strand, 18991425 - 18991472
Alignment:
Q  38 gtagtctagtggctagatttcaccttataagatgaataagtgggatgtt 86  Q
    |||| |||||||||||| ||||||||||||| |||||||||||| ||||    
T  18991425 gtagcctagtggctagaattcaccttataag-tgaataagtggggtgtt 18991472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 111 - 155
Target Start/End: Complemental strand, 34522032 - 34521988
Alignment:
Q  111 atataataatacattgtcctaccaactgatcaatgctcacgggac 155  Q
    |||||||||| |||||||||||||||||  | |||||||||||||    
T  34522032 atataataattcattgtcctaccaactggactatgctcacgggac 34521988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0039 (Bit Score: 54; Significance: 6e-22; HSPs: 1)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 38 - 155
Target Start/End: Complemental strand, 101943 - 101826
Alignment:
Q  38 gtagtctagtggctagatttcaccttataagatgaataagtgggatgttcggagttcgaatctcaaatcctacatataataatacattgtcctaccaact 137  Q
    ||||||||||||||||| ||||||||||||| ||||||||||||||||| || ||||||| | |    ||| ||||||||||| |||| |||||||| ||    
T  101943 gtagtctagtggctagaattcaccttataaggtgaataagtgggatgtttggggttcgaaccccggcccctgcatataataatgcattatcctaccagct 101844  T
Q  138 gatcaatgctcacgggac 155  Q
    || | |||||||||||||    
T  101843 gagctatgctcacgggac 101826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1086 (Bit Score: 52; Significance: 9e-21; HSPs: 1)
Name: scaffold1086
Description:

Target: scaffold1086; HSP #1
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 36 - 155
Target Start/End: Complemental strand, 2602 - 2483
Alignment:
Q  36 aggtagtctagtggctagatttcaccttataagatgaataagtgggatgttcggagttcgaatctcaaatcctacatataataatacattgtcctaccaa 135  Q
    |||||||||||||||| || ||||||||||||| |||||||||||| ||| ||| |||| ||  ||||   || ||||||||||| ||||||||||||||    
T  2602 aggtagtctagtggctggaattcaccttataaggtgaataagtggggtgtccggggttcaaacttcaacctctgcatataataatgcattgtcctaccaa 2503  T
Q  136 ctgatcaatgctcacgggac 155  Q
    ||||   |||||||||||||    
T  2502 ctgagttatgctcacgggac 2483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 51; Significance: 4e-20; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 44 - 150
Target Start/End: Original strand, 43686 - 43791
Alignment:
Q  44 tagtggctagatttcaccttataagatgaataagtgggatgttcggagttcgaatctcaaatcctacatataataatacattgtcctaccaactgatcaa 143  Q
    |||| |||||||||||||||||||| |||||||||||| ||||||  ||||||| | | | |||| ||||||||||| |||||||||||||||||| | |    
T  43686 tagttgctagatttcaccttataaggtgaataagtggggtgttcgaggttcgaa-ccccagtcctgcatataataatgcattgtcctaccaactgagcta 43784  T
Q  144 tgctcac 150  Q
    |||||||    
T  43785 tgctcac 43791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 48; Significance: 2e-18; HSPs: 2)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 36 - 155
Target Start/End: Original strand, 185493 - 185612
Alignment:
Q  36 aggtagtctagtggctagatttcaccttataagatgaataagtgggatgttcggagttcgaatctcaaatcctacatataataatacattgtcctaccaa 135  Q
    |||||| ||||| |||||| ||||||||||||||||||||||||||||||| || |||| || |||    ||| |||||||||||   ||||||||||||    
T  185493 aggtagcctagtagctagaattcaccttataagatgaataagtgggatgtttggggttcaaacctcggcccctgcatataataatgttttgtcctaccaa 185592  T
Q  136 ctgatcaatgctcacgggac 155  Q
    |||| | |||||||| ||||    
T  185593 ctgagctatgctcacaggac 185612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 36 - 97
Target Start/End: Original strand, 26812 - 26873
Alignment:
Q  36 aggtagtctagtggctagatttcaccttataagatgaataagtgggatgttcggagttcgaa 97  Q
    |||||| ||| ||| |||| |||||||||||| ||||||||||||| |||  ||||||||||    
T  26812 aggtagcctaatggttagaattcaccttataaaatgaataagtggggtgtctggagttcgaa 26873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0343 (Bit Score: 42; Significance: 0.000000000000009; HSPs: 1)
Name: scaffold0343
Description:

Target: scaffold0343; HSP #1
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 44 - 137
Target Start/End: Complemental strand, 8666 - 8573
Alignment:
Q  44 tagtggctagatttcaccttataagatgaataagtgggatgttcggagttcgaatctcaaatcctacatataataatacattgtcctaccaact 137  Q
    |||||| |||| ||||| ||||||| ||||||||| || ||||||| ||||||| | |||  ||||||||||||||| |||||||||| |||||    
T  8666 tagtggttagaattcacattataaggtgaataagtagggtgttcggggttcgaaccccaacccctacatataataatgcattgtcctatcaact 8573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044 (Bit Score: 42; Significance: 0.000000000000009; HSPs: 1)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 36 - 97
Target Start/End: Complemental strand, 49934 - 49873
Alignment:
Q  36 aggtagtctagtggctagatttcaccttataagatgaataagtgggatgttcggagttcgaa 97  Q
    ||||||||||||||||||| ||||||||||||| |||||||||||| ||| ||| |||||||    
T  49934 aggtagtctagtggctagaattcaccttataagttgaataagtggggtgtacggggttcgaa 49873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1990 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold1990
Description:

Target: scaffold1990; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 42 - 150
Target Start/End: Complemental strand, 1002 - 894
Alignment:
Q  42 tctagtggctagatttcaccttataagatgaataagtgggatgttcggagttcgaatctcaaatcctacatataataatacattgtcctaccaactgatc 141  Q
    ||||||||||||| ||||||||||||| |||||||||||| |||  ||  |||||| | ||   ||| ||||||||||| |||||||||||||| ||| |    
T  1002 tctagtggctagaattcaccttataaggtgaataagtggggtgtctgggattcgaaccccagcccctgcatataataatgcattgtcctaccaagtgagc 903  T
Q  142 aatgctcac 150  Q
     ||||||||    
T  902 gatgctcac 894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0533 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0533
Description:

Target: scaffold0533; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 43 - 139
Target Start/End: Complemental strand, 9433 - 9337
Alignment:
Q  43 ctagtggctagatttcaccttataagatgaataagtgggatgttcggagttcgaatctcaaatcctacatataataatacattgtcctaccaactga 139  Q
    |||||||||||| ||||||||||||| |||||||||||  |||||||| |||||| | | |  ||| ||| ||||||| ||||||||||| ||||||    
T  9433 ctagtggctagaattcaccttataaggtgaataagtggagtgttcggaattcgaaccccgacccctgcatgtaataatgcattgtcctactaactga 9337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0092 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0092
Description:

Target: scaffold0092; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 42 - 150
Target Start/End: Original strand, 47304 - 47412
Alignment:
Q  42 tctagtggctagatttcaccttataagatgaataagtgggatgttcggagttcgaatctcaaatcctacatataataatacattgtcctaccaactgatc 141  Q
    ||||||||||||| ||||||||||||| |||||||||||| |||  ||  |||||| | ||   ||| ||||||||||| |||||||||||||| ||| |    
T  47304 tctagtggctagaattcaccttataaggtgaataagtggggtgtctgggattcgaaccccagcccctgcatataataatgcattgtcctaccaagtgagc 47403  T
Q  142 aatgctcac 150  Q
     ||||||||    
T  47404 gatgctcac 47412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0178 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0178
Description:

Target: scaffold0178; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 36 - 151
Target Start/End: Complemental strand, 4437 - 4322
Alignment:
Q  36 aggtagtctagtggctagatttcaccttataagatgaataagtgggatgttcggagttcgaatctcaaatcctacatataataatacattgtcctaccaa 135  Q
    ||||||||||||| ||||| ||||||||||||  |||||||||||  ||| ||| ||||||| | | |  ||| |||||||||||  ||||||||| |||    
T  4437 aggtagtctagtgtctagaattcaccttataaagtgaataagtggagtgtccggggttcgaaccccgacccctgcatataataatgtattgtcctatcaa 4338  T
Q  136 ctgatcaatgctcacg 151  Q
    |||| | |||||||||    
T  4337 ctgagctatgctcacg 4322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 44 - 130
Target Start/End: Original strand, 451364 - 451450
Alignment:
Q  44 tagtggctagatttcaccttataagatgaataagtgggatgttcggagttcgaatctcaaatcctacatataataatacattgtcct 130  Q
    ||||||||||| |||| ||||||||||||||||||||| ||| ||||||||||| | |    ||||||||||| ||| |||||||||    
T  451364 tagtggctagaattcatcttataagatgaataagtggggtgtccggagttcgaaccccggcccctacatataacaatgcattgtcct 451450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 39 - 97
Target Start/End: Complemental strand, 166707 - 166649
Alignment:
Q  39 tagtctagtggctagatttcaccttataagatgaataagtgggatgttcggagttcgaa 97  Q
    |||||||||| ||||| |||||||||||||||||||||||||  ||| ||| |||||||    
T  166707 tagtctagtgactagaattcaccttataagatgaataagtggagtgtccggggttcgaa 166649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0687 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0687
Description:

Target: scaffold0687; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 38 - 81
Target Start/End: Complemental strand, 1533 - 1490
Alignment:
Q  38 gtagtctagtggctagatttcaccttataagatgaataagtggg 81  Q
    |||| |||||||||||| |||||| |||||||||||||||||||    
T  1533 gtagcctagtggctagaattcaccctataagatgaataagtggg 1490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0059 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0059
Description:

Target: scaffold0059; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 37 - 151
Target Start/End: Original strand, 28602 - 28716
Alignment:
Q  37 ggtagtctagtggctagatttcaccttataagatgaataagtgggatgttcggagttcgaatctcaaatcctacatataataatacattgtcctaccaac 136  Q
    ||||||||||| | |||| ||||||||||||| ||| ||| | |  ||| ||  ||||||||| | |  | | ||||||||||| |||||| ||||||||    
T  28602 ggtagtctagtagttagaattcaccttataaggtgagtaaatagtgtgtccgaggttcgaatcccgatccatgcatataataatgcattgttctaccaac 28701  T
Q  137 tgatcaatgctcacg 151  Q
    ||| |||||||||||    
T  28702 tgagcaatgctcacg 28716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0229 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0229
Description:

Target: scaffold0229; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 49 - 97
Target Start/End: Complemental strand, 22524 - 22477
Alignment:
Q  49 gctagatttcaccttataagatgaataagtgggatgttcggagttcgaa 97  Q
    |||||| ||||||||||||| |||||||||||| ||||||| |||||||    
T  22524 gctagaattcaccttataaggtgaataagtggg-tgttcggggttcgaa 22477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University