View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15368_low_21 (Length: 256)
Name: NF15368_low_21
Description: NF15368
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15368_low_21 |
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Alignment Details
Target: chr5 (Bit Score: 223; Significance: 1e-123; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 223; E-Value: 1e-123
Query Start/End: Original strand, 1 - 239
Target Start/End: Complemental strand, 22047614 - 22047376
Alignment:
| Q |
1 |
aaaccttatcacctaacttcctcttaagctttccaaactaactatcaagaccctatacacattactttaaaatgtcttcaacaatccaaccaacaaccaa |
100 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||| |
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| T |
22047614 |
aaaccttatcacctaacttcctcttaagctttccaaactaactatcaagaccctatacacattacttcaaaatgtcttcaacaatccaaccaacaatcaa |
22047515 |
T |
|
| Q |
101 |
tgatacttttttgactgctcacattcttgatgaggttacactacttctatctactttttgtatcatattctactatcaaagttgcattttcataatatac |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |
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| T |
22047514 |
tgatacttttttgactgctcacattcttgatgaggttacactgcttctatctactttttctatcatattctactatcaaagttgcattttcataatatac |
22047415 |
T |
|
| Q |
201 |
atcttcatgttaaactacacttacactttgatatattga |
239 |
Q |
| |
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||||||||||||||||||||||||||||||||||||||| |
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| T |
22047414 |
atcttcatgttaaactacacttacactttgatatattga |
22047376 |
T |
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