View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15368_low_27 (Length: 237)
Name: NF15368_low_27
Description: NF15368
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15368_low_27 |
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Alignment Details
Target: chr6 (Bit Score: 202; Significance: 1e-110; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 202; E-Value: 1e-110
Query Start/End: Original strand, 1 - 222
Target Start/End: Original strand, 34880472 - 34880693
Alignment:
| Q |
1 |
ttgttaataaataatagctgatctttgtcaaaatattttgttattacaaaaagggaaatgccaattaataagaatagaagtctcagaaaaactgcacata |
100 |
Q |
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| T |
34880472 |
ttgttaataaataatagctgatctttgtcaaaatattttgttattacaaaaagggaaatgccaattaataagaatagaagtctcagaacaactgcacata |
34880571 |
T |
|
| Q |
101 |
tatcaatatcatgcgacacattatcatcacaagtttccctccatgatcagttattgattcaagtattacaacaacatgaatgtatcacaaatggttagtt |
200 |
Q |
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||||||||||||| |||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||| ||||||||||||||||||||||||||| |
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| T |
34880572 |
tatcaatatcatgtgacacattatcatcacaagtttccctccatgatcagctatcgattcaagtattacaacgacatgaatgtatcacaaatggttagtt |
34880671 |
T |
|
| Q |
201 |
ttgttggtgctagagttgtgat |
222 |
Q |
| |
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|||||||||||||||||||||| |
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| T |
34880672 |
ttgttggtgctagagttgtgat |
34880693 |
T |
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