View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1536_high_13 (Length: 239)

Name: NF1536_high_13
Description: NF1536
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1536_high_13
NF1536_high_13
[»] chr3 (22 HSPs)
chr3 (14-239)||(24794449-24794684)
chr3 (14-239)||(28351611-28351858)
chr3 (90-239)||(28367642-28367791)
chr3 (90-239)||(28375460-28375609)
chr3 (90-239)||(28383282-28383431)
chr3 (90-237)||(38529166-38529313)
chr3 (90-239)||(4951643-4951792)
chr3 (14-98)||(28367534-28367622)
chr3 (14-98)||(28375356-28375444)
chr3 (14-98)||(28383178-28383266)
chr3 (90-182)||(13328267-13328359)
chr3 (104-239)||(5385740-5385874)
chr3 (64-201)||(7783947-7784089)
chr3 (90-239)||(23487091-23487241)
chr3 (139-239)||(17529899-17529998)
chr3 (90-182)||(46305562-46305654)
chr3 (139-239)||(54624703-54624802)
chr3 (139-239)||(32877918-32878017)
chr3 (139-239)||(48978718-48978813)
chr3 (139-239)||(48988258-48988353)
chr3 (116-182)||(19388870-19388936)
chr3 (14-51)||(38528929-38528966)
[»] chr7 (13 HSPs)
chr7 (14-239)||(7593056-7593289)
chr7 (90-239)||(15174590-15174739)
chr7 (90-239)||(32818046-32818194)
chr7 (90-182)||(14644466-14644559)
chr7 (99-239)||(14634776-14634915)
chr7 (99-182)||(33292175-33292258)
chr7 (90-182)||(15947361-15947454)
chr7 (90-182)||(9737052-9737144)
chr7 (14-98)||(15174755-15174847)
chr7 (90-239)||(13874436-13874583)
chr7 (101-238)||(19352589-19352725)
chr7 (111-182)||(11634340-11634411)
chr7 (98-215)||(48710004-48710121)
[»] chr4 (16 HSPs)
chr4 (14-239)||(37059136-37059375)
chr4 (14-239)||(3918116-3918356)
chr4 (14-239)||(54699234-54699482)
chr4 (14-239)||(26812558-26812807)
chr4 (14-239)||(54689801-54690051)
chr4 (90-239)||(26822025-26822174)
chr4 (90-239)||(3242276-3242425)
chr4 (90-239)||(15842887-15843036)
chr4 (14-98)||(3242174-3242260)
chr4 (14-98)||(26822190-26822276)
chr4 (90-182)||(50516487-50516579)
chr4 (90-239)||(20884439-20884586)
chr4 (32-98)||(15842799-15842867)
chr4 (90-182)||(11482421-11482513)
chr4 (139-239)||(23622967-23623066)
chr4 (14-51)||(15842678-15842715)
[»] scaffold0040 (2 HSPs)
scaffold0040 (14-239)||(30712-30961)
scaffold0040 (90-239)||(10092-10240)
[»] chr6 (12 HSPs)
chr6 (14-239)||(18420601-18420838)
chr6 (90-239)||(23895605-23895754)
chr6 (96-239)||(14102357-14102500)
chr6 (14-98)||(21356535-21356619)
chr6 (90-182)||(22066399-22066492)
chr6 (96-239)||(11421446-11421588)
chr6 (96-239)||(12173471-12173613)
chr6 (103-182)||(23884598-23884677)
chr6 (101-239)||(10259779-10259916)
chr6 (139-237)||(23110257-23110354)
chr6 (90-182)||(17512212-17512304)
chr6 (188-236)||(13218405-13218453)
[»] scaffold0001 (2 HSPs)
scaffold0001 (90-237)||(408380-408527)
scaffold0001 (14-72)||(413380-413438)
[»] chr5 (33 HSPs)
chr5 (90-239)||(22489235-22489384)
chr5 (90-239)||(24412878-24413027)
chr5 (90-239)||(24422327-24422476)
chr5 (90-239)||(30444818-30444967)
chr5 (90-239)||(30459248-30459397)
chr5 (90-239)||(18569089-18569239)
chr5 (94-239)||(30454194-30454339)
chr5 (90-239)||(4635995-4636144)
chr5 (90-239)||(42732566-42732714)
chr5 (14-98)||(24413063-24413149)
chr5 (14-98)||(24422518-24422604)
chr5 (14-98)||(30444656-30444742)
chr5 (14-98)||(30454062-30454148)
chr5 (14-98)||(30459140-30459226)
chr5 (133-239)||(22118134-22118240)
chr5 (90-239)||(26652669-26652817)
chr5 (90-239)||(26924254-26924402)
chr5 (14-98)||(18569267-18569353)
chr5 (90-182)||(33955488-33955581)
chr5 (99-239)||(13815371-13815510)
chr5 (90-182)||(20036105-20036198)
chr5 (90-182)||(11223481-11223573)
chr5 (90-182)||(22448319-22448411)
chr5 (105-182)||(20834537-20834614)
chr5 (139-239)||(5600628-5600727)
chr5 (139-239)||(5610274-5610373)
chr5 (111-182)||(24244053-24244124)
chr5 (111-182)||(24290677-24290748)
chr5 (139-239)||(31150673-31150772)
chr5 (98-182)||(37514856-37514940)
chr5 (14-51)||(4636350-4636387)
chr5 (90-155)||(22457655-22457720)
chr5 (14-51)||(22489674-22489711)
[»] chr2 (15 HSPs)
chr2 (90-239)||(31710455-31710604)
chr2 (90-239)||(24022731-24022880)
chr2 (96-239)||(14273254-14273397)
chr2 (98-182)||(35877622-35877706)
chr2 (98-182)||(35885111-35885195)
chr2 (98-182)||(36724824-36724908)
chr2 (90-182)||(3397029-3397122)
chr2 (139-239)||(1800541-1800640)
chr2 (139-239)||(22632450-22632549)
chr2 (97-236)||(18578739-18578877)
chr2 (113-182)||(16446670-16446739)
chr2 (139-239)||(1791047-1791142)
chr2 (96-171)||(29911278-29911353)
chr2 (18-51)||(24022493-24022526)
chr2 (14-51)||(31710244-31710281)
[»] chr1 (11 HSPs)
chr1 (64-239)||(40998998-40999173)
chr1 (96-239)||(5378419-5378562)
chr1 (64-239)||(15809935-15810122)
chr1 (96-239)||(26906241-26906383)
chr1 (90-239)||(21919420-21919568)
chr1 (86-182)||(14272002-14272099)
chr1 (105-182)||(14281888-14281965)
chr1 (96-239)||(21633630-21633772)
chr1 (113-182)||(3470949-3471018)
chr1 (17-51)||(3470620-3470654)
chr1 (102-175)||(30676902-30676976)
[»] chr8 (26 HSPs)
chr8 (90-239)||(20714119-20714268)
chr8 (96-239)||(7789073-7789216)
chr8 (90-239)||(33601762-33601910)
chr8 (101-239)||(31575411-31575548)
chr8 (103-239)||(24096077-24096213)
chr8 (90-239)||(33592123-33592271)
chr8 (90-182)||(20030285-20030377)
chr8 (90-182)||(42712167-42712259)
chr8 (90-182)||(12915565-12915658)
chr8 (90-182)||(12925460-12925553)
chr8 (111-239)||(24634018-24634145)
chr8 (90-182)||(20044924-20045016)
chr8 (102-237)||(15834003-15834137)
chr8 (111-182)||(18251935-18252006)
chr8 (99-181)||(18143427-18143509)
chr8 (104-182)||(18883163-18883241)
chr8 (99-182)||(4843720-4843803)
chr8 (111-182)||(18233033-18233104)
chr8 (111-182)||(18242484-18242555)
chr8 (99-166)||(20714417-20714484)
chr8 (90-239)||(12767681-12767831)
chr8 (101-182)||(25037026-25037107)
chr8 (101-182)||(25051063-25051144)
chr8 (126-239)||(42896174-42896286)
chr8 (19-59)||(7788972-7789012)
chr8 (104-155)||(26194048-26194099)
[»] scaffold0028 (4 HSPs)
scaffold0028 (88-239)||(94417-94569)
scaffold0028 (90-239)||(103860-104010)
scaffold0028 (14-98)||(103748-103834)
scaffold0028 (14-98)||(94305-94391)
[»] scaffold0482 (2 HSPs)
scaffold0482 (96-239)||(3583-3726)
scaffold0482 (19-59)||(3787-3827)
[»] scaffold0206 (1 HSPs)
scaffold0206 (90-182)||(2215-2307)
[»] scaffold0053 (1 HSPs)
scaffold0053 (90-182)||(2250-2342)
[»] scaffold0021 (2 HSPs)
scaffold0021 (90-182)||(124153-124245)
scaffold0021 (144-239)||(100031-100125)
[»] scaffold0334 (1 HSPs)
scaffold0334 (90-185)||(12537-12632)
[»] scaffold0010 (1 HSPs)
scaffold0010 (104-182)||(257064-257142)
[»] scaffold0269 (1 HSPs)
scaffold0269 (139-239)||(14852-14951)
[»] scaffold0247 (1 HSPs)
scaffold0247 (139-239)||(24641-24740)


Alignment Details
Target: chr3 (Bit Score: 168; Significance: 4e-90; HSPs: 22)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 168; E-Value: 4e-90
Query Start/End: Original strand, 14 - 239
Target Start/End: Original strand, 24794449 - 24794684
Alignment:
Q  14 aaaagattattttagcaaggaccagaatgttctggagattaataaaataatgtgtgtgt--tgtgtaactttaaataaagag--------agagaagaat 103  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||        ||||||||||    
T  24794449 aaaagattattttagcaaggaccagaatgttctggagattaataaaataatgtgtgtgtgttgtgtaactttaaataaagagagagagagagagaagaat 24794548  T
Q  104 aacacacgagagttatcctgattcaccaaacccgactacttccagtccccacgcctcgtgtgagattatccactatagttttcttgctaacagaaacttc 203  Q
    |||||| ||||||||||||| ||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  24794549 aacacaggagagttatcctggttcaccaaacccggctacttccagtccccacacctcgtgtgagattatccactatagttttcttgctaacagaaacttc 24794648  T
Q  204 tgactagcactacaagattttgatcacaccagatca 239  Q
    |||||||||||||||  | |||||||||||||||||    
T  24794649 tgactagcactacaatttcttgatcacaccagatca 24794684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 144; E-Value: 8e-76
Query Start/End: Original strand, 14 - 239
Target Start/End: Original strand, 28351611 - 28351858
Alignment:
Q  14 aaaagattattttagcaaggaccagaatgttctggagattaataaaataat--gtgtgtgttgtgtaactttaaataaagag------------------ 93  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||                      
T  28351611 aaaagattattttagcaaggaccagaatgttctggagattaataaaataatatgtgtgtgttgtgtaactttaaataaagagagagatagagatagagag 28351710  T
Q  94 --agagaagaataacacacgagagttatcctgattcaccaaacccgactacttccagtccccacgcctcgtgtgagattatccactatagttttcttgct 191  Q
      |||||||||||||||| ||||||||| ||| ||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  28351711 agagagaagaataacacaggagagttatgctggttcaccaaacccggctacttccagtccccacacctcgtgtgagattatccactatagttttcttgct 28351810  T
Q  192 aacagaaacttctgactagcactacaagattttgatcacaccagatca 239  Q
    ||||||||||||||||||||||||||| || |||||||||||||||||    
T  28351811 aacagaaacttctgactagcactacaatatcttgatcacaccagatca 28351858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 90 - 239
Target Start/End: Original strand, 28367642 - 28367791
Alignment:
Q  90 agagagagaagaataacacacgagagttatcctgattcaccaaacccgactacttccagtccccacgcctcgtgtgagattatccactatagttttcttg 189  Q
    |||||||||||||||||||| ||||||||||||| ||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  28367642 agagagagaagaataacacaggagagttatcctggttcaccaaacccggctacttccagtccccacacctcgtgtgagattatccactatagttttcttg 28367741  T
Q  190 ctaacagaaacttctgactagcactacaagattttgatcacaccagatca 239  Q
    ||||||||||||||||||||||||||||| || |||||||||||||||||    
T  28367742 ctaacagaaacttctgactagcactacaatatcttgatcacaccagatca 28367791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 90 - 239
Target Start/End: Original strand, 28375460 - 28375609
Alignment:
Q  90 agagagagaagaataacacacgagagttatcctgattcaccaaacccgactacttccagtccccacgcctcgtgtgagattatccactatagttttcttg 189  Q
    |||||||||||||||||||| ||||||||||||| ||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  28375460 agagagagaagaataacacaggagagttatcctggttcaccaaacccggctacttccagtccccacacctcgtgtgagattatccactatagttttcttg 28375559  T
Q  190 ctaacagaaacttctgactagcactacaagattttgatcacaccagatca 239  Q
    ||||||||||||||||||||||||||||| || |||||||||||||||||    
T  28375560 ctaacagaaacttctgactagcactacaatatcttgatcacaccagatca 28375609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 90 - 239
Target Start/End: Original strand, 28383282 - 28383431
Alignment:
Q  90 agagagagaagaataacacacgagagttatcctgattcaccaaacccgactacttccagtccccacgcctcgtgtgagattatccactatagttttcttg 189  Q
    |||||||||||||||||||| ||||||||||||| ||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  28383282 agagagagaagaataacacaggagagttatcctggttcaccaaacccggctacttccagtccccacacctcgtgtgagattatccactatagttttcttg 28383381  T
Q  190 ctaacagaaacttctgactagcactacaagattttgatcacaccagatca 239  Q
    ||||||||||||||||||||||||||||| || |||||||||||||||||    
T  28383382 ctaacagaaacttctgactagcactacaatatcttgatcacaccagatca 28383431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 90 - 237
Target Start/End: Original strand, 38529166 - 38529313
Alignment:
Q  90 agagagagaagaataacacacgagagttatcctgattcaccaaacccgactacttccagtccccacgcctcgtgtgagattatccactatagttttcttg 189  Q
    ||||||||| |||||| ||| |||||||||| |  ||||||||||||| ||||||||||| ||||| ||||||||||||||||||||||||||| |||||    
T  38529166 agagagagaggaataatacaggagagttatcatagttcaccaaacccggctacttccagtgcccacacctcgtgtgagattatccactatagttgtcttg 38529265  T
Q  190 ctaacagaaacttctgactagcactacaagattttgatcacaccagat 237  Q
    |||||||||| ||||||||||||||| ||||| |||||||||||||||    
T  38529266 ctaacagaaatttctgactagcactataagatcttgatcacaccagat 38529313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 90 - 239
Target Start/End: Complemental strand, 4951792 - 4951643
Alignment:
Q  90 agagagagaagaataacacacgagagttatcctgattcaccaaacccgactacttccagtccccacgcctcgtgtgagattatccactatagttttcttg 189  Q
    ||||||| |||||||||||| |||||||||| || |||||||||| |||||||||| ||||| ||| |||||||||||||||||||||||| || |||||    
T  4951792 agagagataagaataacacatgagagttatcttggttcaccaaactcgactacttcaagtcctcacacctcgtgtgagattatccactatatttgtcttg 4951693  T
Q  190 ctaacagaaacttctgactagcactacaagattttgatcacaccagatca 239  Q
    |||||||||| ||||||||||||||||||| | ||| |||||||||||||    
T  4951692 ctaacagaaatttctgactagcactacaaggtattggtcacaccagatca 4951643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 14 - 98
Target Start/End: Original strand, 28367534 - 28367622
Alignment:
Q  14 aaaagattattttagcaaggaccagaatgttctggagattaataaaataa----tgtgtgtgttgtgtaactttaaataaagagagaga 98  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||    |||||||||||||||||||||||||||||||||||    
T  28367534 aaaagattattttagcaaggaccagaatgttctggagattaataaaataatgtgtgtgtgtgttgtgtaactttaaataaagagagaga 28367622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 14 - 98
Target Start/End: Original strand, 28375356 - 28375444
Alignment:
Q  14 aaaagattattttagcaaggaccagaatgttctggagattaataaaataa----tgtgtgtgttgtgtaactttaaataaagagagaga 98  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||    |||||||||||||||||||||||||||||||||||    
T  28375356 aaaagattattttagcaaggaccagaatgttctggagattaataaaataatgtgtgtgtgtgttgtgtaactttaaataaagagagaga 28375444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 14 - 98
Target Start/End: Original strand, 28383178 - 28383266
Alignment:
Q  14 aaaagattattttagcaaggaccagaatgttctggagattaataaaataa----tgtgtgtgttgtgtaactttaaataaagagagaga 98  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||    |||||||||||||||||||||||||||||||||||    
T  28383178 aaaagattattttagcaaggaccagaatgttctggagattaataaaataatgtgtgtgtgtgttgtgtaactttaaataaagagagaga 28383266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 90 - 182
Target Start/End: Original strand, 13328267 - 13328359
Alignment:
Q  90 agagagagaagaataacacacgagagttatcctgattcaccaaacccgactacttccagtccccacgcctcgtgtgagattatccactatagt 182  Q
    ||||| |||| ||||||||| |||||||||| || ||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||    
T  13328267 agagaaagaataataacacaggagagttatcttggttcaccaaacccgactacttccagtccccacacttcgtgtgagattatccactatagt 13328359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 104 - 239
Target Start/End: Complemental strand, 5385874 - 5385740
Alignment:
Q  104 aacacacgagagttatcctgattcaccaaacccgactacttccagtccccacgcctcgtgtgagattatccactatagttttcttgctaacagaaacttc 203  Q
    |||||| ||||||||||||| ||||||||||||| ||||||||||||||||| | |||||||||||||||||||||||| | |  ||| | |||||||||    
T  5385874 aacacaggagagttatcctggttcaccaaacccggctacttccagtccccacacttcgtgtgagattatccactatagtatac-agctgatagaaacttc 5385776  T
Q  204 tgactagcactacaagattttgatcacaccagatca 239  Q
    | || | ||||| ||| | |||||||||||||||||    
T  5385775 taaccaacactataaggtcttgatcacaccagatca 5385740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 64 - 201
Target Start/End: Original strand, 7783947 - 7784089
Alignment:
Q  64 tgtgtgtgttgtgtaactttaaataaagagagag-----aagaataacacacgagagttatcctgattcaccaaacccgactacttccagtccccacgcc 158  Q
    ||||||| ||||||| ||||||||||||||| ||     |||||||||||| ||||  | | ||| ||||||||||| ||||||||||||| ||||| ||    
T  7783947 tgtgtgtattgtgtagctttaaataaagagaaagggaagaagaataacacaggagaactgttctggttcaccaaacctgactacttccagttcccacacc 7784046  T
Q  159 tcgtgtgagattatccactatagttttcttgctaacagaaact 201  Q
     | ||||||||||||||||| |||| |||||||||||||||||    
T  7784047 acatgtgagattatccactacagttgtcttgctaacagaaact 7784089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 90 - 239
Target Start/End: Complemental strand, 23487241 - 23487091
Alignment:
Q  90 agagagagaagaataacacacgagagttatcctgattcaccaaacccgactacttc--cagtccccacgcctcgtgtgagattatccactatagttttc- 186  Q
    ||||| |||||||||||||| ||||||||||||| |||||||| ||||  ||||||  ||||||||||   |||||||||||||||||||||||| |||     
T  23487241 agagaaagaagaataacacaggagagttatcctggttcaccaatcccggttacttccacagtccccacatttcgtgtgagattatccactatagtattca 23487142  T
Q  187 -ttgctaacagaaacttctgactagcactacaagattttgatcacaccagatca 239  Q
     ||| |   |||||||||| || | ||||| ||| | |||||||||||||||||    
T  23487141 gttggt---agaaacttctaaccaacactataaggtcttgatcacaccagatca 23487091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 139 - 239
Target Start/End: Original strand, 17529899 - 17529998
Alignment:
Q  139 ctacttccagtccccacgcctcgtgtgagattatccactatagttttcttgctaacagaaacttctgactagcactacaagattttgatcacaccagatc 238  Q
    |||| |||||||||||| |  ||||||||||||||||||||||| | || |||| ||||||||||||| |||||||| || || ||||||||||||||||    
T  17529899 ctacgtccagtccccacactacgtgtgagattatccactatagtatcct-gctatcagaaacttctgaatagcactataatatgttgatcacaccagatc 17529997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 90 - 182
Target Start/End: Original strand, 46305562 - 46305654
Alignment:
Q  90 agagagaga-agaataacacacgagagttatcctgattcaccaaacccgactacttccagtccccacgcctcgtgtgagattatccactatagt 182  Q
    ||||||||| ||||||||||| |||||||||| || |||| |||||||| ||||||||||||||||| | |||| |||||||||||||| ||||    
T  46305562 agagagagagagaataacacaggagagttatcttggttcatcaaacccggctacttccagtccccacacttcgt-tgagattatccactttagt 46305654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 139 - 239
Target Start/End: Complemental strand, 54624802 - 54624703
Alignment:
Q  139 ctacttccagtccccacgcctcgtgtgagattatccactatagttttcttgctaacagaaacttctgactagcactacaagattttgatcacaccagatc 238  Q
    |||| |||||||||||| |  ||||||||||||||||||||||| | || |||| ||||||||||||| |||||||| || || ||||||| ||||||||    
T  54624802 ctacgtccagtccccacactacgtgtgagattatccactatagtatcct-gctatcagaaacttctgaatagcactataatatgttgatcataccagatc 54624704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 139 - 239
Target Start/End: Complemental strand, 32878017 - 32877918
Alignment:
Q  139 ctacttccagtccccacgcctcgtgtgagattatccactatagttttcttgctaacagaaacttctgactagcactacaagattttgatcacaccagatc 238  Q
    |||| |||||||||||| |  |||||||||||||||||||||| | || ||||| || |||||||||| || ||||| ||  | ||||||||||||||||    
T  32878017 ctacgtccagtccccacactacgtgtgagattatccactatag-tatcatgctatcataaacttctgaataacactataatttgttgatcacaccagatc 32877919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 139 - 239
Target Start/End: Complemental strand, 48978813 - 48978718
Alignment:
Q  139 ctacttccagtccccacgcctcgtgtgagattatccactatagttttcttgctaacagaaacttctgactagcactacaagattttgatcacaccagatc 238  Q
    |||| |||||||||||| |  ||||||||||||||||||||||| | | |     ||||||||||||| |||||||| || || ||||||||||||||||    
T  48978813 ctacgtccagtccccacactacgtgtgagattatccactatagtatccat-----cagaaacttctgaatagcactataatatgttgatcacaccagatc 48978719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 139 - 239
Target Start/End: Complemental strand, 48988353 - 48988258
Alignment:
Q  139 ctacttccagtccccacgcctcgtgtgagattatccactatagttttcttgctaacagaaacttctgactagcactacaagattttgatcacaccagatc 238  Q
    |||| |||||||||||| |  ||||||||||||||||||||||| | | |     ||||||||||||| |||||||| || || ||||||||||||||||    
T  48988353 ctacgtccagtccccacactacgtgtgagattatccactatagtatccat-----cagaaacttctgaatagcactataatatgttgatcacaccagatc 48988259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 116 - 182
Target Start/End: Complemental strand, 19388936 - 19388870
Alignment:
Q  116 ttatcctgattcaccaaacccgactacttccagtccccacgcctcgtgtgagattatccactatagt 182  Q
    |||||||| |||||||||  || ||||||| ||||||||| | ||||||||||||||| ||||||||    
T  19388936 ttatcctggttcaccaaaatcggctacttcaagtccccacacttcgtgtgagattatcgactatagt 19388870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 14 - 51
Target Start/End: Original strand, 38528929 - 38528966
Alignment:
Q  14 aaaagattattttagcaaggaccagaatgttctggaga 51  Q
    |||||||||||||| ||||||| |||||||||||||||    
T  38528929 aaaagattattttaacaaggactagaatgttctggaga 38528966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 164; Significance: 9e-88; HSPs: 13)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 164; E-Value: 9e-88
Query Start/End: Original strand, 14 - 239
Target Start/End: Complemental strand, 7593289 - 7593056
Alignment:
Q  14 aaaagattattttagcaaggaccagaatgttctggagattaataaaataatgtgtgtgt--tgtgtaactttaaataaagagagaga------agaataa 105  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||      |||||||    
T  7593289 aaaagatcattttagcaaggaccagaatgttctggagattaataaaataatgtgtgtgtgttgtgtaactttaaataaagagagagagagagaagaataa 7593190  T
Q  106 cacacgagagttatcctgattcaccaaacccgactacttccagtccccacgcctcgtgtgagattatccactatagttttcttgctaacagaaacttctg 205  Q
    |||| ||||||||||||| ||||||||||| | ||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||    
T  7593189 cacaagagagttatcctggttcaccaaacctggctacttccagtccccacacctcgtgtgagattatccattatagttttcttgctaacagaaacttctg 7593090  T
Q  206 actagcactacaagattttgatcacaccagatca 239  Q
    ||||||||||||| || |||||||||||||||||    
T  7593089 actagcactacaatatcttgatcacaccagatca 7593056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 90 - 239
Target Start/End: Complemental strand, 15174739 - 15174590
Alignment:
Q  90 agagagagaagaataacacacgagagttatcctgattcaccaaacccgactacttccagtccccacgcctcgtgtgagattatccactatagttttcttg 189  Q
    |||||||||||||||||||| |||| |||||||| ||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  15174739 agagagagaagaataacacaggagatttatcctggttcaccaaacccggctacttccagtccccacacctcgtgtgagattatccactatagttttcttg 15174640  T
Q  190 ctaacagaaacttctgactagcactacaagattttgatcacaccagatca 239  Q
    |||||| ||||||||||||||||||||||||| |||||||||||||||||    
T  15174639 ctaacaaaaacttctgactagcactacaagatcttgatcacaccagatca 15174590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 90 - 239
Target Start/End: Complemental strand, 32818194 - 32818046
Alignment:
Q  90 agagagagaagaataacacacgagagttatcctgattcaccaaacccgactacttccagtccccacgcctcgtgtgagattatccactatagttttc--t 187  Q
    ||||| |||||||||||||| ||||||||||||| ||||||||||||| |||||||| |||||||| | |||||||||||||||||||||||| |||  |    
T  32818194 agagaaagaagaataacacaggagagttatcctggttcaccaaacccggctacttccggtccccacacttcgtgtgagattatccactatagtattcagt 32818095  T
Q  188 tgctaacagaaacttctgactagcactacaagattttgatcacaccagatca 239  Q
    || |   |||||||||| || | ||||| ||| | |||||||||||||||||    
T  32818094 tggt---agaaacttctaaccaacactataaggtcttgatcacaccagatca 32818046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 90 - 182
Target Start/End: Original strand, 14644466 - 14644559
Alignment:
Q  90 agagagaga-agaataacacacgagagttatcctgattcaccaaacccgactacttccagtccccacgcctcgtgtgagattatccactatagt 182  Q
    ||||||||| ||||||||||| ||||||||||||| ||||||||||||| ||||||||||||||||| | ||||||||||||||||||||||||    
T  14644466 agagagagagagaataacacaggagagttatcctggttcaccaaacccggctacttccagtccccacacttcgtgtgagattatccactatagt 14644559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 99 - 239
Target Start/End: Original strand, 14634776 - 14634915
Alignment:
Q  99 agaataacacacgagagttatcctgattcaccaaacccgactacttccagtccccacgcctcgtgtgagattatccactatagttttcttgctaacagaa 198  Q
    ||||||||||| ||||||||||||| ||||||||||||| ||||||||||||||||| | |||||||||||||||||||||||| | |  |||   ||||    
T  14634776 agaataacacaggagagttatcctggttcaccaaacccggctacttccagtccccacacttcgtgtgagattatccactatagtatgc-agctggtagaa 14634874  T
Q  199 acttctgactagcactacaagattttgatcacaccagatca 239  Q
    |||||| || | ||||| ||| | |||||||||||||||||    
T  14634875 acttctaaccaacactataaggtcttgatcacaccagatca 14634915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 99 - 182
Target Start/End: Original strand, 33292175 - 33292258
Alignment:
Q  99 agaataacacacgagagttatcctgattcaccaaacccgactacttccagtccccacgcctcgtgtgagattatccactatagt 182  Q
    ||||||||||| ||||||||||||| ||||||||||||| ||||||||||||||||| | ||||||||||||||||||||||||    
T  33292175 agaataacacaggagagttatcctggttcaccaaacccggctacttccagtccccacacttcgtgtgagattatccactatagt 33292258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 90 - 182
Target Start/End: Original strand, 15947361 - 15947454
Alignment:
Q  90 agagagaga-agaataacacacgagagttatcctgattcaccaaacccgactacttccagtccccacgcctcgtgtgagattatccactatagt 182  Q
    ||||||||| ||||||||||| ||||||||||||| ||||||||||||| |||||||||||| |||| | ||||||||||||||||||||||||    
T  15947361 agagagagagagaataacacaggagagttatcctggttcaccaaacccggctacttccagtcaccacacttcgtgtgagattatccactatagt 15947454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 90 - 182
Target Start/End: Complemental strand, 9737144 - 9737052
Alignment:
Q  90 agagagagaagaataacacacgagagttatcctgattcaccaaacccgactacttccagtccccacgcctcgtgtgagattatccactatagt 182  Q
    ||||| |||||||||||||| ||||||||||||| ||||| ||||||| ||||||||||||||||| | ||||||||||||||||| ||||||    
T  9737144 agagaaagaagaataacacaggagagttatcctggttcactaaacccggctacttccagtccccacacttcgtgtgagattatccattatagt 9737052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 14 - 98
Target Start/End: Complemental strand, 15174847 - 15174755
Alignment:
Q  14 aaaagattattttagcaaggaccagaatgttctggagattaataaaataatgtgt--------gtgttgtgtaactttaaataaagagagaga 98  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||||        ||||||||||||||||||||||||||||||    
T  15174847 aaaagattattttagcaaggaccagaatgttctggagattgataaaataatgtgtgtgtgtgtgtgttgtgtaactttaaataaagagagaga 15174755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 90 - 239
Target Start/End: Complemental strand, 13874583 - 13874436
Alignment:
Q  90 agagagagaagaataacacacgagagttatcctgattcaccaaacccgactacttccagtccccacgcctcgtgtgagattatccactatagttttc--t 187  Q
    |||||||||  ||||||||| ||||||||||||| |||||| || ||| ||||||||||||||||| | ||||||||||||||||||||||||||||  |    
T  13874583 agagagagagaaataacacaggagagttatcctggttcacccaatccg-ctacttccagtccccacacttcgtgtgagattatccactatagttttcagt 13874485  T
Q  188 tgctaacagaaacttctgactagcactacaagattttgatcacaccagatca 239  Q
    || |   |||||||||| || | ||||| ||| | |||||||||||||||||    
T  13874484 tggt---agaaacttctaaccaacactataaggtcttgatcacaccagatca 13874436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 101 - 238
Target Start/End: Original strand, 19352589 - 19352725
Alignment:
Q  101 aataacacacgagagttatcctgattcaccaaacccgactacttccagtccccacgcctcgtgtgagattatccactatagttttcttgctaacagaaac 200  Q
    ||||| ||| ||||||||| ||| |||||||||  || ||||||||||||| ||| | ||||||||||||||||||||||| | || |||||||||||||    
T  19352589 aataatacaggagagttatactggttcaccaaattcggctacttccagtcctcacacttcgtgtgagattatccactatag-tctcctgctaacagaaac 19352687  T
Q  201 ttctgactagcactacaagattttgatcacaccagatc 238  Q
    |||||||| | |||| ||  |  |||||||||||||||    
T  19352688 ttctgacttgtactataaattcctgatcacaccagatc 19352725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 111 - 182
Target Start/End: Original strand, 11634340 - 11634411
Alignment:
Q  111 gagagttatcctgattcaccaaacccgactacttccagtccccacgcctcgtgtgagattatccactatagt 182  Q
    ||||||||||||| ||||||||| ||| ||||||||||||||||| | ||||||||||||||||||||||||    
T  11634340 gagagttatcctggttcaccaaatccggctacttccagtccccacacttcgtgtgagattatccactatagt 11634411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 98 - 215
Target Start/End: Original strand, 48710004 - 48710121
Alignment:
Q  98 aagaataacacacgagagttatcctgattcaccaaacccgactacttccagt-ccccacgcctcgtgtgagattatccactatagttttcttgctaacag 196  Q
    |||||||||||| ||||| ||| ||| |||||||||| ||  |||||||||| |||||| | |||||||||||||||||||||||| |||  ||||  ||    
T  48710004 aagaataacacaggagagatattctggttcaccaaactcggatacttccagtcccccacacttcgtgtgagattatccactatagtattc-agctagtag 48710102  T
Q  197 aaacttctgactagcacta 215  Q
    |||||||| ||||||||||    
T  48710103 aaacttctaactagcacta 48710121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 156; Significance: 5e-83; HSPs: 16)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 156; E-Value: 5e-83
Query Start/End: Original strand, 14 - 239
Target Start/End: Complemental strand, 37059375 - 37059136
Alignment:
Q  14 aaaagattattttagcaaggaccagaatgttctggagattaataaaataatgtgtgtgt--tgtgtaactttaaataaagagagaga------------a 99  Q
    |||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||| |||||||||            |    
T  37059375 aaaatattaatttagcaaggaccagaatgttctggagattaataaaataatgtgtgtgtgttgtgtaactttaaatagagagagagagagagagagagaa 37059276  T
Q  100 gaataacacacgagagttatcctgattcaccaaacccgactacttccagtccccacgcctcgtgtgagattatccactatagttttcttgctaacagaaa 199  Q
    |||||||||| ||||||||||||| ||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  37059275 gaataacacaggagagttatcctggttcaccaaacccggctacttccagtccccacacctcgtgtgagattatccactatagttttcttgctaacagaaa 37059176  T
Q  200 cttctgactagcactacaagattttgatcacaccagatca 239  Q
    |||||||||||||||||||||| |||||||||||||||||    
T  37059175 cttctgactagcactacaagatcttgatcacaccagatca 37059136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 14 - 239
Target Start/End: Complemental strand, 3918356 - 3918116
Alignment:
Q  14 aaaagattattttagcaaggaccagaatgttctggagattaataaaataatgtgtgtgt--tgtgtaactttaaataaagagagaga------------- 98  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||                 
T  3918356 aaaagattattttagcaaggaccagaacgttctggagattaataaaataatgtgtgtgtgttgtgtaactttaaataaagagagagagagagagagagag 3918257  T
Q  99 agaataacacacgagagttatcctgattcaccaaacccgactacttccagtccccacgcctcgtgtgagattatccactatagttttcttgctaacagaa 198  Q
    ||||||||||| ||||||||||||| ||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  3918256 agaataacacaggagagttatcctggttcaccaaacccggctacttccagtccccacacctcgtgtgagattatccactatagttttcttgctaacagaa 3918157  T
Q  199 acttctgactagcactacaagattttgatcacaccagatca 239  Q
    |||||||||||||| |||||  | |||||||||||||||||    
T  3918156 acttctgactagcattacaatttcttgatcacaccagatca 3918116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 14 - 239
Target Start/End: Original strand, 54699234 - 54699482
Alignment:
Q  14 aaaagattattttagcaaggaccagaatgttctggagattaataaaataatgtgtgtgt--tgtgtaactttaaataaagagagaga------------- 98  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||                 
T  54699234 aaaagattattttagcaaggaccagaatgttctggagattaataaaataatgtgtgtgtgttgtgtaactttaaataaagagagagagagagagagagag 54699333  T
Q  99 --------agaataacacacgagagttatcctgattcaccaaacccgactacttccagtccccacgcctcgtgtgagattatccactatagttttcttgc 190  Q
            ||||||||||| ||||||||||||| ||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  54699334 agagagagagaataacacaggagagttatcctggttcaccaaacccggctacttccagtccccacacctcgtgtgagattatccactatagttttcttgc 54699433  T
Q  191 taacagaaacttctgactagcactacaagattttgatcacaccagatca 239  Q
    ||||||||||||||||||||||||||||  | |||||||||||||||||    
T  54699434 taacagaaacttctgactagcactacaatttcttgatcacaccagatca 54699482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 14 - 239
Target Start/End: Complemental strand, 26812807 - 26812558
Alignment:
Q  14 aaaagattattttagcaaggaccagaatgttctggagattaataaaataatgtgtgtgt--tgtgtaactttaaataaagagagaga------------- 98  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||| ||||||||||||||                 
T  26812807 aaaagattattttagcaaggaccagaatgttctggagattaataaaataatgtgtgtgtgttgtgtaactttgaataaagagagagatagagatagagag 26812708  T
Q  99 ---------agaataacacacgagagttatcctgattcaccaaacccgactacttccagtccccacgcctcgtgtgagattatccactatagttttcttg 189  Q
             ||||||||||| ||||||||||||| ||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  26812707 agagagagaagaataacacaggagagttatcctggttcaccaaacccggctacttccagtccccacacctcgtgtgagattatccactatagttttcttg 26812608  T
Q  190 ctaacagaaacttctgactagcactacaagattttgatcacaccagatca 239  Q
    ||||||||||||||||||||||||||||| || |||||||||||||||||    
T  26812607 ctaacagaaacttctgactagcactacaatatcttgatcacaccagatca 26812558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 14 - 239
Target Start/End: Original strand, 54689801 - 54690051
Alignment:
Q  14 aaaagattattttagcaaggaccagaatgttctggagattaataaaataatgtgtgtgt--tgtgtaactttaaataaaga------------------- 92  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||                       
T  54689801 aaaagattattttagcaaggaccagaatgttctggagattaataaaataatgtgtgtgtgttgtgtaactttaaataaagagagagagagagagagagag 54689900  T
Q  93 ---gagaga-agaataacacacgagagttatcctgattcaccaaacccgactacttccagtccccacgcctcgtgtgagattatccactatagttttctt 188  Q
       |||||| ||||||||||| ||||||||||||| ||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  54689901 agagagagagagaataacacaggagagttatcctggttcaccaaacccggctacttccagtccccacacctcgtgtgagattatccactatagttttctt 54690000  T
Q  189 gctaacagaaacttctgactagcactacaagattttgatcacaccagatca 239  Q
    ||||||||||||||||||||||||||||||  | |||||||||||||||||    
T  54690001 gctaacagaaacttctgactagcactacaatttcttgatcacaccagatca 54690051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 90 - 239
Target Start/End: Complemental strand, 26822174 - 26822025
Alignment:
Q  90 agagagagaagaataacacacgagagttatcctgattcaccaaacccgactacttccagtccccacgcctcgtgtgagattatccactatagttttcttg 189  Q
    |||||||||||||||||||| ||||||||||||| ||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  26822174 agagagagaagaataacacaggagagttatcctggttcaccaaacccggctacttccagtccccacacctcgtgtgagattatccactatagttttcttg 26822075  T
Q  190 ctaacagaaacttctgactagcactacaagattttgatcacaccagatca 239  Q
    ||||||||||||||||||||||||||||| || |||||||||||||||||    
T  26822074 ctaacagaaacttctgactagcactacaatatcttgatcacaccagatca 26822025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 90 - 239
Target Start/End: Original strand, 3242276 - 3242425
Alignment:
Q  90 agagagagaagaataacacacgagagttatcctgattcaccaaacccgactacttccagtccccacgcctcgtgtgagattatccactatagttttcttg 189  Q
    |||||||||||||||||||| ||||||||||||| ||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  3242276 agagagagaagaataacacaggagagttatcctggttcaccaaacccggctacttccagtccccacacctcgtgtgagattatccactatagttttcttg 3242375  T
Q  190 ctaacagaaacttctgactagcactacaagattttgatcacaccagatca 239  Q
    |||||||||||||||||||||||||||||  | |||||||||||||||||    
T  3242376 ctaacagaaacttctgactagcactacaatttcttgatcacaccagatca 3242425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 90 - 239
Target Start/End: Original strand, 15842887 - 15843036
Alignment:
Q  90 agagagagaagaataacacacgagagttatcctgattcaccaaacccgactacttccagtccccacgcctcgtgtgagattatccactatagttttcttg 189  Q
    ||||||||| |||||||||| |||||||||| || |||||||||| || ||||||||||||||||| ||||||||||||||||||||||||||| |||||    
T  15842887 agagagagaggaataacacaggagagttatcttggttcaccaaactcggctacttccagtccccacacctcgtgtgagattatccactatagttgtcttg 15842986  T
Q  190 ctaacagaaacttctgactagcactacaagattttgatcacaccagatca 239  Q
    |||||||||||||||||||||||||| ||||| ||||||||| |||||||    
T  15842987 ctaacagaaacttctgactagcactataagatcttgatcacatcagatca 15843036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 14 - 98
Target Start/End: Original strand, 3242174 - 3242260
Alignment:
Q  14 aaaagattattttagcaaggaccagaatgttctggagattaataaaataatgtgtgtgt--tgtgtaactttaaataaagagagaga 98  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||    
T  3242174 aaaagattattttagcaaggaccagaatattctggagattaataaaataatgtgtgtgtactgtgtaactttaaataaagagagaga 3242260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 14 - 98
Target Start/End: Complemental strand, 26822276 - 26822190
Alignment:
Q  14 aaaagattattttagcaaggaccagaatgttctggagattaataaaataatgtgt--gtgttgtgtaactttaaataaagagagaga 98  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||| ||||||||||||||    
T  26822276 aaaagattattttagcaaggaccagaatgttctggagattaataaaataatgtgtgtgtgttgtgtaactttgaataaagagagaga 26822190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 90 - 182
Target Start/End: Original strand, 50516487 - 50516579
Alignment:
Q  90 agagagagaagaataacacacgagagttatcctgattcaccaaacccgactacttccagtccccacgcctcgtgtgagattatccactatagt 182  Q
    ||||| |||||||||||||| ||||||||||||| ||| ||||||||||||||||||||||||||| | ||||||||||||||||||||||||    
T  50516487 agagaaagaagaataacacaggagagttatcctggttccccaaacccgactacttccagtccccacacttcgtgtgagattatccactatagt 50516579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 90 - 239
Target Start/End: Original strand, 20884439 - 20884586
Alignment:
Q  90 agagagagaagaataacacacgagagttatcctgattcaccaaacccgactacttccagtccccacgcctcgtgtgagattatccactatagttttc--t 187  Q
    ||||||||| |||||||||| ||||||||||||| ||| ||||||||| ||||||||||||||||| | |||||||||||||||||||||||| | |  |    
T  20884439 agagagaga-gaataacacaggagagttatcctggttccccaaacccggctacttccagtccccacacttcgtgtgagattatccactatagtatgcagt 20884537  T
Q  188 tgctaacagaaacttctgactagcactacaagattttgatcacaccagatca 239  Q
    || |   |||||||||| || | ||||| ||| |||||||||||||||||||    
T  20884538 tggt---agaaacttctaaccaacactataaggttttgatcacaccagatca 20884586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 32 - 98
Target Start/End: Original strand, 15842799 - 15842867
Alignment:
Q  32 ggaccagaatgttctggagattaataaaataatgtgtgt--gttgtgtaactttaaataaagagagaga 98  Q
    |||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||| |||||||    
T  15842799 ggaccagaatgttctggagattaataaaataatgtgtgtgcgttgtgtaactttaaataaatagagaga 15842867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 90 - 182
Target Start/End: Complemental strand, 11482513 - 11482421
Alignment:
Q  90 agagagagaagaataacacacgagagttatcctgattcaccaaacccgactacttccagtccccacgcctcgtgtgagattatccactatagt 182  Q
    ||||| |||||||||||  | ||||||||||||| ||  ||||||||| ||||||| ||||||||| | ||||||||||||||||||||||||    
T  11482513 agagaaagaagaataacgtaggagagttatcctggttgtccaaacccggctacttctagtccccacacttcgtgtgagattatccactatagt 11482421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 139 - 239
Target Start/End: Complemental strand, 23623066 - 23622967
Alignment:
Q  139 ctacttccagtccccacgcctcgtgtgagattatccactatagttttcttgctaacagaaacttctgactagcactacaagattttgatcacaccagatc 238  Q
    |||| |||||||||||| |  ||||||||||||||||||||||| | || |||| ||||||||||||| |||||||| || || ||||||||||||||||    
T  23623066 ctacgtccagtccccacactacgtgtgagattatccactatagtatcct-gctatcagaaacttctgaatagcactataatatgttgatcacaccagatc 23622968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 14 - 51
Target Start/End: Original strand, 15842678 - 15842715
Alignment:
Q  14 aaaagattattttagcaaggaccagaatgttctggaga 51  Q
    |||||||||||||| |||||||||||||||||||||||    
T  15842678 aaaagattattttaacaaggaccagaatgttctggaga 15842715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040 (Bit Score: 140; Significance: 2e-73; HSPs: 2)
Name: scaffold0040
Description:

Target: scaffold0040; HSP #1
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 14 - 239
Target Start/End: Original strand, 30712 - 30961
Alignment:
Q  14 aaaagattattttagcaaggaccagaatgttctggagattaataaaataatgtgtgtgt--tgtgtaactttaaataaaga------------------- 92  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||| ||||||||                       
T  30712 aaaagattattttagcaaggaccagaatgttctggagattaataaaataatgtgtgtgtgttgtgtaactttgaataaagagagagatagagatagagag 30811  T
Q  93 ---gagagaagaataacacacgagagttatcctgattcaccaaacccgactacttccagtccccacgcctcgtgtgagattatccactatagttttcttg 189  Q
       ||||||||||||||||| ||||||||||||| ||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  30812 agagagagaagaataacacaggagagttatcctggttcaccaaacccggctacttccagtccccacacctcgtgtgagattatccactatagttttcttg 30911  T
Q  190 ctaacagaaacttctgactagcactacaagattttgatcacaccagatca 239  Q
    |||||||||||||||||||| |||||||| ||||||||||||||||||||    
T  30912 ctaacagaaacttctgactaacactacaatattttgatcacaccagatca 30961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040; HSP #2
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 90 - 239
Target Start/End: Complemental strand, 10240 - 10092
Alignment:
Q  90 agagagagaagaataacacacgagagttatcctgattcaccaaacccgactacttccagtccccacgcctcgtgtgagattatccactatagttttcttg 189  Q
    ||||||||  |||||||||| |||||||||| || |||||||||| || ||| ||||||||||||| || |||||||||||||||||||||||| |||||    
T  10240 agagagaggggaataacacatgagagttatcttggttcaccaaacacggcta-ttccagtccccacaccccgtgtgagattatccactatagttgtcttg 10142  T
Q  190 ctaacagaaacttctgactagcactacaagattttgatcacaccagatca 239  Q
    |||||||||||||||||||||||||| ||| | | |||||||||||||||    
T  10141 ctaacagaaacttctgactagcactataaggtctagatcacaccagatca 10092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 140; Significance: 2e-73; HSPs: 12)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 14 - 239
Target Start/End: Complemental strand, 18420838 - 18420601
Alignment:
Q  14 aaaagattattttagcaaggaccagaatgttctggagattaataaaataatgtgtgt--gttgtgtaactttaaataaagagagaga----------aga 101  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||  ||||||||||||||||||||||||||||          |||    
T  18420838 aaaagattattttagcaaggaccagaatgttctggagattaataaaataaagtgtgtatgttgtgtaactttaaataaagagagagagagagagagaaga 18420739  T
Q  102 ataacacacgagagttatcctgattcaccaaacccgactacttccagtccccacgcctcgtgtgagattatccactatagttttcttgctaacagaaact 201  Q
    |||||||| || |||||||||| ||||| ||||||| |||||||||||||| || |||||||||||||||| ||||||||||||||||||||||||||||    
T  18420738 ataacacaggatagttatcctggttcacaaaacccggctacttccagtcccgacacctcgtgtgagattatacactatagttttcttgctaacagaaact 18420639  T
Q  202 tctgactagcactacaagattttgatcacaccagatca 239  Q
    ||||||||||||||  | || |||||||||||||||||    
T  18420638 tctgactagcactaacaaatcttgatcacaccagatca 18420601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 90 - 239
Target Start/End: Original strand, 23895605 - 23895754
Alignment:
Q  90 agagagagaagaataacacacgagagttatcctgattcaccaaacccgactacttccagtccccacgcctcgtgtgagattatccactatagttttcttg 189  Q
    |||||||||||||||||||| ||||||||||||| ||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  23895605 agagagagaagaataacacaggagagttatcctggttcaccaaacccggctacttccagtccccacacctcgtgtgagattatccactatagttttcttg 23895704  T
Q  190 ctaacagaaacttctgactagcactacaagattttgatcacaccagatca 239  Q
    ||||||||||||||||||||||||||||| || |||||||||||||||||    
T  23895705 ctaacagaaacttctgactagcactacaatatcttgatcacaccagatca 23895754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 96 - 239
Target Start/End: Complemental strand, 14102500 - 14102357
Alignment:
Q  96 agaagaataacacacgagagttatcctgattcaccaaacccgactacttccagtccccacgcctcgtgtgagattatccactatagttttcttgctaaca 195  Q
    |||||||||||||   ||| |||||||| ||||||||||||| ||||||||||||||||| |||| |||||||||||||||||||||| |||||||||||    
T  14102500 agaagaataacactgaagaattatcctggttcaccaaacccggctacttccagtccccacacctcttgtgagattatccactatagttgtcttgctaaca 14102401  T
Q  196 gaaacttctgactagcactacaagattttgatcacaccagatca 239  Q
    ||||||| |||||||||||  ||| | ||||||||| |||||||    
T  14102400 gaaacttttgactagcactgtaaggtcttgatcacaacagatca 14102357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 14 - 98
Target Start/End: Original strand, 21356535 - 21356619
Alignment:
Q  14 aaaagattattttagcaaggaccagaatgttctggagattaataaaataatgtgtgtgttgtgtaactttaaataaagagagaga 98  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||    
T  21356535 aaaagattattttagcaaggaccagaatgttctggagattaataaaataatgtgtgtgttatgtaactttaaatagagagagaga 21356619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 90 - 182
Target Start/End: Complemental strand, 22066492 - 22066399
Alignment:
Q  90 agagagaga-agaataacacacgagagttatcctgattcaccaaacccgactacttccagtccccacgcctcgtgtgagattatccactatagt 182  Q
    ||||||||| ||||||||||| ||||||||||||| ||||||||||||| ||||||||||||||||| | ||||||||||||||||||||||||    
T  22066492 agagagagagagaataacacaggagagttatcctggttcaccaaacccggctacttccagtccccacacttcgtgtgagattatccactatagt 22066399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 96 - 239
Target Start/End: Original strand, 11421446 - 11421588
Alignment:
Q  96 agaagaataacacacgagagttatcctgattcaccaaacccgactacttccagtccccacgcctcgtgtgagattatccactatagttttcttgctaaca 195  Q
    |||| ||||||||| || | |||||||  |||| |||| ||| ||||||||||||||||| ||||||||||||||||||||||||| | || || |||||    
T  11421446 agaacaataacacaagataattatcctagttcatcaaatccggctacttccagtccccacacctcgtgtgagattatccactatag-tatcatgttaaca 11421544  T
Q  196 gaaacttctgactagcactacaagattttgatcacaccagatca 239  Q
     ||| ||||||||| ||||| ||||| |||||||||||||||||    
T  11421545 aaaaattctgactaacactataagatcttgatcacaccagatca 11421588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 96 - 239
Target Start/End: Complemental strand, 12173613 - 12173471
Alignment:
Q  96 agaagaataacacacgagagttatcctgattcaccaaacccgactacttccagtccccacgcctcgtgtgagattatccactatagttttcttgctaaca 195  Q
    |||||||||||||  |||| ||||| |  |||||||||| || |||||| |||||||||| ||| |||| |||||||||||||||| | || ||||||||    
T  12173613 agaagaataacacctgagatttatcatagttcaccaaactcggctactttcagtccccacaccttgtgtaagattatccactatag-tatcatgctaaca 12173515  T
Q  196 gaaacttctgactagcactacaagattttgatcacaccagatca 239  Q
    ||||||| |||||||||| | ||  | |||||||||||||||||    
T  12173514 gaaacttatgactagcaccataaattcttgatcacaccagatca 12173471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 103 - 182
Target Start/End: Complemental strand, 23884677 - 23884598
Alignment:
Q  103 taacacacgagagttatcctgattcaccaaacccgactacttccagtccccacgcctcgtgtgagattatccactatagt 182  Q
    ||||||| ||||||||||||| ||||||||||||| ||||||||||||||||| | |||||||||||| |||||||||||    
T  23884677 taacacaggagagttatcctggttcaccaaacccggctacttccagtccccacacttcgtgtgagattgtccactatagt 23884598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 101 - 239
Target Start/End: Original strand, 10259779 - 10259916
Alignment:
Q  101 aataacacacgagagttatcctgattcaccaaacccgactacttccagtccccacgcctcgtgtgagattatccactatagttttcttgctaacagaaac 200  Q
    ||||||||| |||| |||| ||| ||||||||| ||  ||||||||||||| ||| | ||||||| |||| |||||||||| | || |||||| ||||||    
T  10259779 aataacacaggagaattattctggttcaccaaatccagctacttccagtcctcacacttcgtgtgggattctccactatag-tatcctgctaagagaaac 10259877  T
Q  201 ttctgactagcactacaagattttgatcacaccagatca 239  Q
    ||||||||||||||| ||  | |||||||||||||||||    
T  10259878 ttctgactagcactataaattcttgatcacaccagatca 10259916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 139 - 237
Target Start/End: Original strand, 23110257 - 23110354
Alignment:
Q  139 ctacttccagtccccacgcctcgtgtgagattatccactatagttttcttgctaacagaaacttctgactagcactacaagattttgatcacaccagat 237  Q
    ||||||||||||||||| || ||||| ||||||||||||||||| |||  ||||||||||||||||||||||||||| | | | |||||||||||||||    
T  23110257 ctacttccagtccccacaccccgtgttagattatccactatagtattcg-gctaacagaaacttctgactagcactatatgttcttgatcacaccagat 23110354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 90 - 182
Target Start/End: Original strand, 17512212 - 17512304
Alignment:
Q  90 agagagagaagaataacacacgagagttatcctgattcaccaaacccgactacttccagtccccacgcctcgtgtgagattatccactatagt 182  Q
    ||||| ||||||||||||||  |||||||||||| |||||||||| || |||||| |||||||||| | || |||||||||||||||||||||    
T  17512212 agagaaagaagaataacacagaagagttatcctggttcaccaaactcggctactttcagtccccacacttcttgtgagattatccactatagt 17512304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 188 - 236
Target Start/End: Complemental strand, 13218453 - 13218405
Alignment:
Q  188 tgctaacagaaacttctgactagcactacaagattttgatcacaccaga 236  Q
    ||||||||||||||| ||||||| |||| ||| | ||||||||||||||    
T  13218453 tgctaacagaaacttttgactagaactataaggtattgatcacaccaga 13218405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 124; Significance: 6e-64; HSPs: 2)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 124; E-Value: 6e-64
Query Start/End: Original strand, 90 - 237
Target Start/End: Complemental strand, 408527 - 408380
Alignment:
Q  90 agagagagaagaataacacacgagagttatcctgattcaccaaacccgactacttccagtccccacgcctcgtgtgagattatccactatagttttcttg 189  Q
    |||||||||||||||||||| ||||||||||||| ||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  408527 agagagagaagaataacacaggagagttatcctggttcaccaaacccgtctacttccagtccccacacctcgtgtgagattatccactatagttttcttg 408428  T
Q  190 ctaacagaaacttctgactagcactacaagattttgatcacaccagat 237  Q
    ||||||||||||||||||||||||||||| || |||||||||||||||    
T  408427 ctaacagaaacttctgactagcactacaatatcttgatcacaccagat 408380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 14 - 72
Target Start/End: Complemental strand, 413438 - 413380
Alignment:
Q  14 aaaagattattttagcaaggaccagaatgttctggagattaataaaataatgtgtgtgt 72  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  413438 aaaagattattttagcaaggaccagaatgttctggagattaataaaataatgtgtgtgt 413380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 118; Significance: 2e-60; HSPs: 33)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 118; E-Value: 2e-60
Query Start/End: Original strand, 90 - 239
Target Start/End: Complemental strand, 22489384 - 22489235
Alignment:
Q  90 agagagagaagaataacacacgagagttatcctgattcaccaaacccgactacttccagtccccacgcctcgtgtgagattatccactatagttttcttg 189  Q
    |||||||||||||||||||| ||||||||||||| ||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||| |||||    
T  22489384 agagagagaagaataacacaggagagttatcctggttcaccaaacccggctacttccagtccccacacctcgtgtgagattatccactatagttgtcttg 22489285  T
Q  190 ctaacagaaacttctgactagcactacaagattttgatcacaccagatca 239  Q
    ||||||||||||| |||||||||||| ||||| |||||||||||||||||    
T  22489284 ctaacagaaacttatgactagcactataagatcttgatcacaccagatca 22489235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 118; E-Value: 2e-60
Query Start/End: Original strand, 90 - 239
Target Start/End: Complemental strand, 24413027 - 24412878
Alignment:
Q  90 agagagagaagaataacacacgagagttatcctgattcaccaaacccgactacttccagtccccacgcctcgtgtgagattatccactatagttttcttg 189  Q
    |||||||||||||||||||| ||||||||||||| ||||||||| ||| ||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  24413027 agagagagaagaataacacaggagagttatcctggttcaccaaatccggctacttccagtccccacacctcgtgtgagattatccactatagttttcttg 24412928  T
Q  190 ctaacagaaacttctgactagcactacaagattttgatcacaccagatca 239  Q
    |||||||||||||||||||||||||||||  | |||||||||||||||||    
T  24412927 ctaacagaaacttctgactagcactacaatttcttgatcacaccagatca 24412878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 118; E-Value: 2e-60
Query Start/End: Original strand, 90 - 239
Target Start/End: Complemental strand, 24422476 - 24422327
Alignment:
Q  90 agagagagaagaataacacacgagagttatcctgattcaccaaacccgactacttccagtccccacgcctcgtgtgagattatccactatagttttcttg 189  Q
    |||||||||||||||||||| ||||||||||||| ||||||||| ||| ||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  24422476 agagagagaagaataacacaggagagttatcctggttcaccaaatccggctacttccagtccccacacctcgtgtgagattatccactatagttttcttg 24422377  T
Q  190 ctaacagaaacttctgactagcactacaagattttgatcacaccagatca 239  Q
    |||||||||||||||||||||||||||||  | |||||||||||||||||    
T  24422376 ctaacagaaacttctgactagcactacaatttcttgatcacaccagatca 24422327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 118; E-Value: 2e-60
Query Start/End: Original strand, 90 - 239
Target Start/End: Original strand, 30444818 - 30444967
Alignment:
Q  90 agagagagaagaataacacacgagagttatcctgattcaccaaacccgactacttccagtccccacgcctcgtgtgagattatccactatagttttcttg 189  Q
    |||||||||  ||||||||| ||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  30444818 agagagagagaaataacacaggagagttatcctgattcaccaaacccggctacttccagtccccacacctcgtgtgagattatccactatagttttcttg 30444917  T
Q  190 ctaacagaaacttctgactagcactacaagattttgatcacaccagatca 239  Q
    |||||||||||||||||||||||||||||  | |||||||||||||||||    
T  30444918 ctaacagaaacttctgactagcactacaatttcttgatcacaccagatca 30444967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 118; E-Value: 2e-60
Query Start/End: Original strand, 90 - 239
Target Start/End: Original strand, 30459248 - 30459397
Alignment:
Q  90 agagagagaagaataacacacgagagttatcctgattcaccaaacccgactacttccagtccccacgcctcgtgtgagattatccactatagttttcttg 189  Q
    |||||||||| ||||||||| ||||||||||||| ||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  30459248 agagagagaaaaataacacaggagagttatcctggttcaccaaacccggctacttccagtccccacacctcgtgtgagattatccactatagttttcttg 30459347  T
Q  190 ctaacagaaacttctgactagcactacaagattttgatcacaccagatca 239  Q
    |||||||||||||||||||||||||||||  | |||||||||||||||||    
T  30459348 ctaacagaaacttctgactagcactacaatttcttgatcacaccagatca 30459397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 90 - 239
Target Start/End: Complemental strand, 18569239 - 18569089
Alignment:
Q  90 agagagaga-agaataacacacgagagttatcctgattcaccaaacccgactacttccagtccccacgcctcgtgtgagattatccactatagttttctt 188  Q
    ||||||||| ||||||||||| ||||||||||||| ||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  18569239 agagagagagagaataacacaggagagttatcctggttcaccaaacccggctacttccagtccccacacctcgtgtgagattatccactatagttttctt 18569140  T
Q  189 gctaacagaaacttctgactagcactacaagattttgatcacaccagatca 239  Q
    ||||||||||||||||||||||||||||||  | |||||||||||||||||    
T  18569139 gctaacagaaacttctgactagcactacaatttcttgatcacaccagatca 18569089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 94 - 239
Target Start/End: Original strand, 30454194 - 30454339
Alignment:
Q  94 agagaagaataacacacgagagttatcctgattcaccaaacccgactacttccagtccccacgcctcgtgtgagattatccactatagttttcttgctaa 193  Q
    |||||| ||||||||| ||||||||||||| ||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  30454194 agagaaaaataacacaggagagttatcctggttcaccaaacccggctacttccagtccccacacctcgtgtgagattatccactatagttttcttgctaa 30454293  T
Q  194 cagaaacttctgactagcactacaagattttgatcacaccagatca 239  Q
    |||||||||||||||||||||||||  | |||||||||||||||||    
T  30454294 cagaaacttctgactagcactacaatttcttgatcacaccagatca 30454339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 90 - 239
Target Start/End: Complemental strand, 4636144 - 4635995
Alignment:
Q  90 agagagagaagaataacacacgagagttatcctgattcaccaaacccgactacttccagtccccacgcctcgtgtgagattatccactatagttttcttg 189  Q
    ||||||||| |||||||||| ||||||||||||| ||||||||||||| ||| || |||||||||| ||||  ||||||||||||||||||||| |||||    
T  4636144 agagagagaggaataacacatgagagttatcctggttcaccaaacccggctattttcagtccccacacctcacgtgagattatccactatagttgtcttg 4636045  T
Q  190 ctaacagaaacttctgactagcactacaagattttgatcacaccagatca 239  Q
    |||||||||||||||||| ||||||| ||||| |||||||||||| ||||    
T  4636044 ctaacagaaacttctgaccagcactataagatcttgatcacaccatatca 4635995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 90 - 239
Target Start/End: Original strand, 42732566 - 42732714
Alignment:
Q  90 agagagagaagaataacacacgagagttatcctgattcaccaaacccgactacttccagtccccacgcctcgtgtgagattatccactatagttttcttg 189  Q
    ||||| |||||||||||||| ||||||||||||| ||||||||||||| ||||||||||||||||| | |||||||||||||||||||||||| |||  |    
T  42732566 agagaaagaagaataacacaagagagttatcctggttcaccaaacccggctacttccagtccccacacttcgtgtgagattatccactatagtattc-ag 42732664  T
Q  190 ctaacagaaacttctgactagcactacaagattttgatcacaccagatca 239  Q
    |||  |||||||||| |||||||||| ||| | |||||||||||||||||    
T  42732665 ctagtagaaacttctaactagcactataaggtcttgatcacaccagatca 42732714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 14 - 98
Target Start/End: Complemental strand, 24413149 - 24413063
Alignment:
Q  14 aaaagattattttagcaaggaccagaatgttctggagattaataaaataatgtgt--gtgttgtgtaactttaaataaagagagaga 98  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||    
T  24413149 aaaagattattttagcaaggaccagaatgttctggagattaataaaataatgtgtgtgtgttgtgtaactttaaataaagagagaga 24413063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 14 - 98
Target Start/End: Complemental strand, 24422604 - 24422518
Alignment:
Q  14 aaaagattattttagcaaggaccagaatgttctggagattaataaaataatgtgt--gtgttgtgtaactttaaataaagagagaga 98  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||    
T  24422604 aaaagattattttagcaaggaccagaatgttctggagattaataaaataatgtgtgtgtgttgtgtaactttaaataaagagagaga 24422518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 14 - 98
Target Start/End: Original strand, 30444656 - 30444742
Alignment:
Q  14 aaaagattattttagcaaggaccagaatgttctggagattaataaaataa--tgtgtgtgttgtgtaactttaaataaagagagaga 98  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||    
T  30444656 aaaagattattttagcaaggaccagaatgttctggagattaataaaataatgtgtgtgtgttgtgtaactttaaataaagagagaga 30444742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 14 - 98
Target Start/End: Original strand, 30454062 - 30454148
Alignment:
Q  14 aaaagattattttagcaaggaccagaatgttctggagattaataaaataa--tgtgtgtgttgtgtaactttaaataaagagagaga 98  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||    
T  30454062 aaaagattattttagcaaggaccagaatgttctggagattaataaaataatgtgtgtgtgttgtgtaactttaaataaagagagaga 30454148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 14 - 98
Target Start/End: Original strand, 30459140 - 30459226
Alignment:
Q  14 aaaagattattttagcaaggaccagaatgttctggagattaataaaataa--tgtgtgtgttgtgtaactttaaataaagagagaga 98  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||    
T  30459140 aaaagattattttagcaaggaccagaatgttctggagattaataaaataatgtgtgtgtgttgtgtaactttaaataaagagagaga 30459226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 133 - 239
Target Start/End: Original strand, 22118134 - 22118240
Alignment:
Q  133 acccgactacttccagtccccacgcctcgtgtgagattatccactatagttttcttgctaacagaaacttctgactagcactacaagattttgatcacac 232  Q
    ||||||||||||||||||||||| ||||||||||||||||||| ||||||| |||||||||||||||||||||| || ||||| ||| | ||||||||||    
T  22118134 acccgactacttccagtccccacacctcgtgtgagattatccattatagttgtcttgctaacagaaacttctgaataacactataaggtcttgatcacac 22118233  T
Q  233 cagatca 239  Q
    |||||||    
T  22118234 cagatca 22118240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 90 - 239
Target Start/End: Complemental strand, 26652817 - 26652669
Alignment:
Q  90 agagagagaagaataacacacgagagttatcctgattcaccaaacccgactacttccagtccccacgcctcgtgtgagattatccactatagttttcttg 189  Q
    ||||| |||||||||||||| ||||||||| ||| ||||||||||| ||||||||||||||||||| | ||||||||||| |||||||||||| |||  |    
T  26652817 agagaaagaagaataacacaggagagttatgctggttcaccaaacctgactacttccagtccccacacttcgtgtgagataatccactatagtattc-ag 26652719  T
Q  190 ctaacagaaacttctgactagcactacaagattttgatcacaccagatca 239  Q
    |||| |||||||||| ||||||||||  || | |||||||||||| ||||    
T  26652718 ctaatagaaacttctaactagcactattaggtcttgatcacaccatatca 26652669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 90 - 239
Target Start/End: Complemental strand, 26924402 - 26924254
Alignment:
Q  90 agagagagaagaataacacacgagagttatcctgattcaccaaacccgactacttccagtccccacgcctcgtgtgagattatccactatagttttcttg 189  Q
    ||||| |||||||||||||| ||||||||| ||| ||||||||||| ||||||||||||||||||| | ||||||||||| |||||||||||| |||  |    
T  26924402 agagaaagaagaataacacaggagagttatgctggttcaccaaacctgactacttccagtccccacacttcgtgtgagataatccactatagtattc-ag 26924304  T
Q  190 ctaacagaaacttctgactagcactacaagattttgatcacaccagatca 239  Q
    |||| |||||||||| ||||||||||  || | |||||||||||| ||||    
T  26924303 ctaatagaaacttctaactagcactattaggtcttgatcacaccatatca 26924254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 14 - 98
Target Start/End: Complemental strand, 18569353 - 18569267
Alignment:
Q  14 aaaagattattttagcaaggaccagaatgttctggagattaataaaataatgtgt--gtgttgtgtaactttaaataaagagagaga 98  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||  |||||||||||||||||||| |||||||||    
T  18569353 aaaagattattttagcaaggaccaggatgttctggagattaataaaataatgtgtgtgtgttgtgtaactttaaatagagagagaga 18569267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 90 - 182
Target Start/End: Original strand, 33955488 - 33955581
Alignment:
Q  90 agagagaga-agaataacacacgagagttatcctgattcaccaaacccgactacttccagtccccacgcctcgtgtgagattatccactatagt 182  Q
    ||||||||| ||||||||||| ||||||||||||| ||||||||||||| ||||||||||||||||| | ||||||||||||||||||||||||    
T  33955488 agagagagagagaataacacaggagagttatcctggttcaccaaacccggctacttccagtccccacacttcgtgtgagattatccactatagt 33955581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 99 - 239
Target Start/End: Original strand, 13815371 - 13815510
Alignment:
Q  99 agaataacacacgagagttatcctgattcaccaaacccgactacttccagtccccacgcctcgtgtgagattatccactatagttttc--ttgctaacag 196  Q
    ||||||||||| ||||||||||||| ||||||||| ||| ||||||||||||||||| | || ||||||||||||||||||||| |||  ||| |   ||    
T  13815371 agaataacacaggagagttatcctggttcaccaaatccggctacttccagtccccacacttcatgtgagattatccactatagtattcagttggt---ag 13815467  T
Q  197 aaacttctgactagcactacaagattttgatcacaccagatca 239  Q
    |||||||| || | ||||| ||| | |||||||||||||||||    
T  13815468 aaacttctaaccaacactataaggtcttgatcacaccagatca 13815510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 90 - 182
Target Start/End: Complemental strand, 20036198 - 20036105
Alignment:
Q  90 agagagaga-agaataacacacgagagttatcctgattcaccaaacccgactacttccagtccccacgcctcgtgtgagattatccactatagt 182  Q
    ||||||||| ||||||||| | ||||||||||||| ||||||||||||| ||||||||||||||||| | || |||||||||||||||||||||    
T  20036198 agagagagagagaataacataggagagttatcctggttcaccaaacccggctacttccagtccccacacatcatgtgagattatccactatagt 20036105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 90 - 182
Target Start/End: Complemental strand, 11223573 - 11223481
Alignment:
Q  90 agagagagaagaataacacacgagagttatcctgattcaccaaacccgactacttccagtccccacgcctcgtgtgagattatccactatagt 182  Q
    |||| |||||||||||||||  |||||||||||| |||||||||| || ||||||||||||||||| | ||||||||||||||||| ||||||    
T  11223573 agagggagaagaataacacaaaagagttatcctggttcaccaaactcggctacttccagtccccacacttcgtgtgagattatccattatagt 11223481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 90 - 182
Target Start/End: Original strand, 22448319 - 22448411
Alignment:
Q  90 agagagagaagaataacacacgagagttatcctgattcaccaaacccgactacttccagtccccacgcctcgtgtgagattatccactatagt 182  Q
    |||||||||  ||||||||| ||||||||||||| |||||| || ||| ||||||||||||||||| | ||||||||||||||||||||||||    
T  22448319 agagagagagaaataacacaagagagttatcctggttcacccaatccggctacttccagtccccacacttcgtgtgagattatccactatagt 22448411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 105 - 182
Target Start/End: Complemental strand, 20834614 - 20834537
Alignment:
Q  105 acacacgagagttatcctgattcaccaaacccgactacttccagtccccacgcctcgtgtgagattatccactatagt 182  Q
    ||||| ||||||||||||| ||||||||||||| ||||||||||||||||| |  |||||||||||||||||||||||    
T  20834614 acacaggagagttatcctggttcaccaaacccggctacttccagtccccacactccgtgtgagattatccactatagt 20834537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 139 - 239
Target Start/End: Complemental strand, 5600727 - 5600628
Alignment:
Q  139 ctacttccagtccccacgcctcgtgtgagattatccactatagttttcttgctaacagaaacttctgactagcactacaagattttgatcacaccagatc 238  Q
    |||| |||||||||||| || ||||||||||||||||||||||| | || |||| ||||||||||||| |||||||| || || ||||||||||||||||    
T  5600727 ctacgtccagtccccacaccacgtgtgagattatccactatagtatcct-gctatcagaaacttctgaatagcactataatatgttgatcacaccagatc 5600629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 139 - 239
Target Start/End: Complemental strand, 5610373 - 5610274
Alignment:
Q  139 ctacttccagtccccacgcctcgtgtgagattatccactatagttttcttgctaacagaaacttctgactagcactacaagattttgatcacaccagatc 238  Q
    |||| |||||||||||| || ||||||||||||||||||||||| | || |||| ||||||||||||| |||||||| || || ||||||||||||||||    
T  5610373 ctacgtccagtccccacaccacgtgtgagattatccactatagtatcct-gctatcagaaacttctgaatagcactataatatgttgatcacaccagatc 5610275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 111 - 182
Target Start/End: Original strand, 24244053 - 24244124
Alignment:
Q  111 gagagttatcctgattcaccaaacccgactacttccagtccccacgcctcgtgtgagattatccactatagt 182  Q
    ||||||||||||| ||||||||| ||| ||||||||||||||||| | ||||||||||||||||||||||||    
T  24244053 gagagttatcctggttcaccaaatccggctacttccagtccccacacttcgtgtgagattatccactatagt 24244124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 111 - 182
Target Start/End: Original strand, 24290677 - 24290748
Alignment:
Q  111 gagagttatcctgattcaccaaacccgactacttccagtccccacgcctcgtgtgagattatccactatagt 182  Q
    ||||||||||||| ||||||||| ||| ||||||||||||||||| | ||||||||||||||||||||||||    
T  24290677 gagagttatcctggttcaccaaatccggctacttccagtccccacacttcgtgtgagattatccactatagt 24290748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 139 - 239
Target Start/End: Original strand, 31150673 - 31150772
Alignment:
Q  139 ctacttccagtccccacgcctcgtgtgagattatccactatagttttcttgctaacagaaacttctgactagcactacaagattttgatcacaccagatc 238  Q
    |||| |||||||||||| |  ||||||||||||||||||||||| | || |||| ||||||||||||| |||||||| || || ||||||||||||||||    
T  31150673 ctacgtccagtccccacactacgtgtgagattatccactatagtatcct-gctatcagaaacttctgaatagcactataatatgttgatcacaccagatc 31150771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 98 - 182
Target Start/End: Original strand, 37514856 - 37514940
Alignment:
Q  98 aagaataacacacgagagttatcctgattcaccaaacccgactacttccagtccccacgcctcgtgtgagattatccactatagt 182  Q
    |||||||||||| |||| |||| ||| |||| |||| ||| ||||||| ||||||||| ||| ||||||||||||||||||||||    
T  37514856 aagaataacacatgagatttatactggttcatcaaagccggctacttctagtccccacaccttgtgtgagattatccactatagt 37514940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 14 - 51
Target Start/End: Complemental strand, 4636387 - 4636350
Alignment:
Q  14 aaaagattattttagcaaggaccagaatgttctggaga 51  Q
    |||||||||||||| ||| |||||||||||||||||||    
T  4636387 aaaagattattttaacaaagaccagaatgttctggaga 4636350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 90 - 155
Target Start/End: Original strand, 22457655 - 22457720
Alignment:
Q  90 agagagagaagaataacacacgagagttatcctgattcaccaaacccgactacttccagtccccac 155  Q
    |||||||||  |||||||||  |||||||||||  |||||| || ||| |||||||||||||||||    
T  22457655 agagagagagaaataacacagaagagttatccttgttcacccaatccggctacttccagtccccac 22457720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 14 - 51
Target Start/End: Complemental strand, 22489711 - 22489674
Alignment:
Q  14 aaaagattattttagcaaggaccagaatgttctggaga 51  Q
    |||||||||||||| |||||| ||||||||||||||||    
T  22489711 aaaagattattttaacaaggatcagaatgttctggaga 22489674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 118; Significance: 2e-60; HSPs: 15)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 118; E-Value: 2e-60
Query Start/End: Original strand, 90 - 239
Target Start/End: Original strand, 31710455 - 31710604
Alignment:
Q  90 agagagagaagaataacacacgagagttatcctgattcaccaaacccgactacttccagtccccacgcctcgtgtgagattatccactatagttttcttg 189  Q
    |||||||||||||||||||| ||||||||||||  ||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||| |||||    
T  31710455 agagagagaagaataacacatgagagttatccttgttcaccaaacccggctacttccagtccccacacctcgtgtgagattatccactatagttgtcttg 31710554  T
Q  190 ctaacagaaacttctgactagcactacaagattttgatcacaccagatca 239  Q
    |||||||||||||||||||||||||| ||||| |||||||||||||||||    
T  31710555 ctaacagaaacttctgactagcactataagatcttgatcacaccagatca 31710604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 90 - 239
Target Start/End: Original strand, 24022731 - 24022880
Alignment:
Q  90 agagagagaagaataacacacgagagttatcctgattcaccaaacccgactacttccagtccccacgcctcgtgtgagattatccactatagttttcttg 189  Q
    ||||||||||||||||||   ||||||||||||  ||||||||||||| ||||||||| | ||||| ||||||||||||||||||||||||||| |||||    
T  24022731 agagagagaagaataacattggagagttatcctcgttcaccaaacccggctacttccaattcccacacctcgtgtgagattatccactatagttgtcttg 24022830  T
Q  190 ctaacagaaacttctgactagcactacaagattttgatcacaccagatca 239  Q
    |||||||||||||||||||||||||| ||||| |||||||||||||||||    
T  24022831 ctaacagaaacttctgactagcactataagatcttgatcacaccagatca 24022880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 96 - 239
Target Start/End: Complemental strand, 14273397 - 14273254
Alignment:
Q  96 agaagaataacacacgagagttatcctgattcaccaaacccgactacttccagtccccacgcctcgtgtgagattatccactatagttttcttgctaaca 195  Q
    ||||||||||||||||||| |||||||| ||||||||||||| |||||| ||||| |||| ||||||||||||||||||||||||||| |||||||||||    
T  14273397 agaagaataacacacgagaattatcctggttcaccaaacccggctactttcagtctccacacctcgtgtgagattatccactatagttgtcttgctaaca 14273298  T
Q  196 gaaacttctgactagcactacaagattttgatcacaccagatca 239  Q
    |||||||||||||||||||| ||||| || ||||||||| ||||    
T  14273297 gaaacttctgactagcactataagatcttaatcacaccatatca 14273254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 98 - 182
Target Start/End: Complemental strand, 35877706 - 35877622
Alignment:
Q  98 aagaataacacacgagagttatcctgattcaccaaacccgactacttccagtccccacgcctcgtgtgagattatccactatagt 182  Q
    |||||||||| | ||||||||||||| ||||||||||||| ||||||||||||||||| | ||||||||||||||||||||||||    
T  35877706 aagaataacataggagagttatcctggttcaccaaacccggctacttccagtccccacacttcgtgtgagattatccactatagt 35877622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 98 - 182
Target Start/End: Complemental strand, 35885195 - 35885111
Alignment:
Q  98 aagaataacacacgagagttatcctgattcaccaaacccgactacttccagtccccacgcctcgtgtgagattatccactatagt 182  Q
    |||||||||| | ||||||||||||| ||||||||||||| ||||||||||||||||| | ||||||||||||||||||||||||    
T  35885195 aagaataacataggagagttatcctggttcaccaaacccggctacttccagtccccacacttcgtgtgagattatccactatagt 35885111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 98 - 182
Target Start/End: Complemental strand, 36724908 - 36724824
Alignment:
Q  98 aagaataacacacgagagttatcctgattcaccaaacccgactacttccagtccccacgcctcgtgtgagattatccactatagt 182  Q
    |||||||||| | ||||||||||||| ||||||||||||| ||||||||||||||||| | ||||||||||||||||||||||||    
T  36724908 aagaataacataggagagttatcctggttcaccaaacccggctacttccagtccccacacttcgtgtgagattatccactatagt 36724824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 90 - 182
Target Start/End: Complemental strand, 3397122 - 3397029
Alignment:
Q  90 agagagaga-agaataacacacgagagttatcctgattcaccaaacccgactacttccagtccccacgcctcgtgtgagattatccactatagt 182  Q
    ||||||||| ||| ||||||| |||||||||| || ||||||||||||  ||||||| ||||||||| | ||||||||||||||||||||||||    
T  3397122 agagagagagagagtaacacaggagagttatcatggttcaccaaacccagctacttctagtccccacacttcgtgtgagattatccactatagt 3397029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 139 - 239
Target Start/End: Complemental strand, 1800640 - 1800541
Alignment:
Q  139 ctacttccagtccccacgcctcgtgtgagattatccactatagttttcttgctaacagaaacttctgactagcactacaagattttgatcacaccagatc 238  Q
    |||| |||||||||||| |  ||||||||||||||||||||||| | || |||| ||||||||||||| |||||||| || || ||||||||||||||||    
T  1800640 ctacgtccagtccccacactacgtgtgagattatccactatagtatcct-gctatcagaaacttctgaatagcactataatatgttgatcacaccagatc 1800542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 139 - 239
Target Start/End: Complemental strand, 22632549 - 22632450
Alignment:
Q  139 ctacttccagtccccacgcctcgtgtgagattatccactatagttttcttgctaacagaaacttctgactagcactacaagattttgatcacaccagatc 238  Q
    |||| |||||||||||| |  ||||||||||||||||||||||| | || |||| |||||||||||||||| ||||| || || ||||||||||||||||    
T  22632549 ctacgtccagtccccacactacgtgtgagattatccactatagtatcct-gctatcagaaacttctgactaacactataatatgttgatcacaccagatc 22632451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 97 - 236
Target Start/End: Complemental strand, 18578877 - 18578739
Alignment:
Q  97 gaagaataacacacgagagttatcctgattcaccaaacccgactacttccagtccccacgcctcgtgtgagattatccactatagttttcttgctaacag 196  Q
    ||||||||||||| |||| ||||||   |||| ||||||||||||||| |||||||||| ||| |||||||||||| |||  ||  | || | |||||||    
T  18578877 gaagaataacacatgagatttatccatgttcatcaaacccgactactttcagtccccacaccttgtgtgagattattcacagta-atatcctcctaacag 18578779  T
Q  197 aaacttctgactagcactacaagattttgatcacaccaga 236  Q
    |||||| ||||||| |||| ||| | ||||| ||||||||    
T  18578778 aaacttttgactaggactataagttcttgataacaccaga 18578739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 113 - 182
Target Start/End: Complemental strand, 16446739 - 16446670
Alignment:
Q  113 gagttatcctgattcaccaaacccgactacttccagtccccacgcctcgtgtgagattatccactatagt 182  Q
    |||||||||||  |||| ||| |||||||||| ||||||||||   ||||||||||||||||||||||||    
T  16446739 gagttatcctggatcactaaatccgactactttcagtccccacatttcgtgtgagattatccactatagt 16446670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 139 - 239
Target Start/End: Complemental strand, 1791142 - 1791047
Alignment:
Q  139 ctacttccagtccccacgcctcgtgtgagattatccactatagttttcttgctaacagaaacttctgactagcactacaagattttgatcacaccagatc 238  Q
    |||| |||||||||||| |  ||||||||||||||||||||||| | | |     ||||||||||||| |||||||| || || ||||||||||||||||    
T  1791142 ctacgtccagtccccacactacgtgtgagattatccactatagtatccat-----cagaaacttctgaatagcactataatatgttgatcacaccagatc 1791048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 96 - 171
Target Start/End: Complemental strand, 29911353 - 29911278
Alignment:
Q  96 agaagaataacacacgagagttatcctgattcaccaaacccgactacttccagtccccacgcctcgtgtgagatta 171  Q
    |||||||||||||| |||| ||||| || || |||||| ||  || |||||||||||| | |||||||||||||||    
T  29911353 agaagaataacacatgagatttatcatggttaaccaaatccagctgcttccagtcccctcacctcgtgtgagatta 29911278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 18 - 51
Target Start/End: Original strand, 24022493 - 24022526
Alignment:
Q  18 gattattttagcaaggaccagaatgttctggaga 51  Q
    |||||||||| |||||||||||||||||||||||    
T  24022493 gattattttaacaaggaccagaatgttctggaga 24022526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 14 - 51
Target Start/End: Original strand, 31710244 - 31710281
Alignment:
Q  14 aaaagattattttagcaaggaccagaatgttctggaga 51  Q
    |||||||||||||| ||||||||||||| |||||||||    
T  31710244 aaaagattattttaacaaggaccagaatattctggaga 31710281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 116; Significance: 4e-59; HSPs: 11)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 64 - 239
Target Start/End: Original strand, 40998998 - 40999173
Alignment:
Q  64 tgtgtgtgttgtgtaactttaaataaagagagagaagaataacacacgagagttatcctgattcaccaaacccgactacttccagtccccacgcctcgtg 163  Q
    ||||||| ||||||||||||| | | ||||||||| ||||||||||  |||||||||||| ||||||||||||||| ||||||||||||||| |||||||    
T  40998998 tgtgtgtattgtgtaactttagagagagagagagaggaataacacataagagttatcctggttcaccaaacccgacaacttccagtccccacacctcgtg 40999097  T
Q  164 tgagattatccactatagttttcttgctaacagaaacttctgactagcactacaagattttgatcacaccagatca 239  Q
    |||||||||||||||||||| |||||||||| ||||||| |||||||||||| ||| |||||||||||||||||||    
T  40999098 tgagattatccactatagttgtcttgctaacggaaacttatgactagcactataaggttttgatcacaccagatca 40999173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 96 - 239
Target Start/End: Original strand, 5378419 - 5378562
Alignment:
Q  96 agaagaataacacacgagagttatcctgattcaccaaacccgactacttccagtccccacgcctcgtgtgagattatccactatagttttcttgctaaca 195  Q
    |||||||||||||| |||| |||||||| ||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||    
T  5378419 agaagaataacacaggagaattatcctggttcaccaaacccggctacttccagtccccacacctcgtgtgagattatccactatagttgtcttgctaaca 5378518  T
Q  196 gaaacttctgactagcactacaagattttgatcacaccagatca 239  Q
    ||||||||| |||||||||| ||| | |||||||||||||||||    
T  5378519 gaaacttctaactagcactataaggtcttgatcacaccagatca 5378562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 64 - 239
Target Start/End: Original strand, 15809935 - 15810122
Alignment:
Q  64 tgtgtgtgttgtgtaactttaaataaa----gagagagaagaataacacacgagagttatcctgattcaccaaacccgactacttccag--------tcc 151  Q
    ||||||| |||||||||||||||||||    ||||||||| ||||||||| |||| |||||||| ||||||||| ||||||||||||||        |||    
T  15809935 tgtgtgtattgtgtaactttaaataaaaagagagagagaataataacacaagagaattatcctggttcaccaaatccgactacttccagagttcgagtcc 15810034  T
Q  152 ccacgcctcgtgtgagattatccactatagttttcttgctaacagaaacttctgactagcactacaagattttgatcacaccagatca 239  Q
    |||| |||||||||||||||||||||||| || ||||| |||||||||||||||| |||||||| ||| | |||||||||||||||||    
T  15810035 ccacacctcgtgtgagattatccactataattatcttggtaacagaaacttctgagtagcactataaggtcttgatcacaccagatca 15810122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 96 - 239
Target Start/End: Original strand, 26906241 - 26906383
Alignment:
Q  96 agaagaataacacacgagagttatcctgattcaccaaacccgactacttccagtccccacgcctcgtgtgagattatccactatagttttcttgctaaca 195  Q
    ||||||||||||||||||| |||||||| ||||||||||| | ||||||| ||||||||  ||||||||||||||||||| ||||  | ||||| |||||    
T  26906241 agaagaataacacacgagatttatcctggttcaccaaaccaggctacttctagtccccatacctcgtgtgagattatccattata-atatcttgttaaca 26906339  T
Q  196 gaaacttctgactagcactacaagattttgatcacaccagatca 239  Q
    |||||||||||||||||||| ||| | ||| |||||||||||||    
T  26906340 gaaacttctgactagcactataagttcttggtcacaccagatca 26906383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 90 - 239
Target Start/End: Original strand, 21919420 - 21919568
Alignment:
Q  90 agagagagaagaataacacacgagagttatcctgattcaccaaacccgactacttccagtccccacgcctcgtgtgagattatccactatagttttc--t 187  Q
    |||||||||  ||||||||| |||||||||||||||||||| || ||| ||||||||||||||||| | ||||||||||||||||||||||||||||  |    
T  21919420 agagagagagaaataacacaggagagttatcctgattcacccaatccggctacttccagtccccacacttcgtgtgagattatccactatagttttcagt 21919519  T
Q  188 tgctaacagaaacttctgactagcactacaagattttgatcacaccagatca 239  Q
    || |   |||||||||| || | ||||| ||| | |||||||||||||||||    
T  21919520 tggt---agaaacttctaaccaacactataaggtcttgatcacaccagatca 21919568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 86 - 182
Target Start/End: Original strand, 14272002 - 14272099
Alignment:
Q  86 ataaagagagaga-agaataacacacgagagttatcctgattcaccaaacccgactacttccagtccccacgcctcgtgtgagattatccactatagt 182  Q
    ||||||||||| | ||||||||||| ||||||||||||| ||||||||||||| ||||||||||||||||| | ||||||||||||||||||||||||    
T  14272002 ataaagagagaaagagaataacacaggagagttatcctggttcaccaaacccggctacttccagtccccacacttcgtgtgagattatccactatagt 14272099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 105 - 182
Target Start/End: Original strand, 14281888 - 14281965
Alignment:
Q  105 acacacgagagttatcctgattcaccaaacccgactacttccagtccccacgcctcgtgtgagattatccactatagt 182  Q
    ||||| ||||||||||||| ||||||||||||| ||||||||||||||||| | ||||||||||||||||||||||||    
T  14281888 acacaggagagttatcctggttcaccaaacccggctacttccagtccccacacttcgtgtgagattatccactatagt 14281965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 96 - 239
Target Start/End: Complemental strand, 21633772 - 21633630
Alignment:
Q  96 agaagaataacacacgagagttatcctgattcaccaaacccgactacttccagtccccacgcctcgtgtgagattatccactatagttttcttgctaaca 195  Q
    |||||||||||||| || |  ||| ||| ||||||||||||| |||| || ||||||||| | |  ||||||||||||||||||||| ||| | |||  |    
T  21633772 agaagaataacacaagataaatattctggttcaccaaacccggctacgtctagtccccacactttttgtgagattatccactatagtattc-tactagta 21633674  T
Q  196 gaaacttctgactagcactacaagattttgatcacaccagatca 239  Q
    ||||||||||||||||| || ||| | ||| |||||||||||||    
T  21633673 gaaacttctgactagcattataaggtcttggtcacaccagatca 21633630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 113 - 182
Target Start/End: Original strand, 3470949 - 3471018
Alignment:
Q  113 gagttatcctgattcaccaaacccgactacttccagtccccacgcctcgtgtgagattatccactatagt 182  Q
    ||||||||||| |||||||||||||  ||||||||| |||||| | || |||||||||||||||| ||||    
T  3470949 gagttatcctggttcaccaaacccggttacttccagcccccacacttcatgtgagattatccactgtagt 3471018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 17 - 51
Target Start/End: Original strand, 3470620 - 3470654
Alignment:
Q  17 agattattttagcaaggaccagaatgttctggaga 51  Q
    |||||| ||||||||||||||||||||||||||||    
T  3470620 agattagtttagcaaggaccagaatgttctggaga 3470654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 102 - 175
Target Start/End: Complemental strand, 30676976 - 30676902
Alignment:
Q  102 ataacacacgagagttatcctgattcac-caaacccgactacttccagtccccacgcctcgtgtgagattatcca 175  Q
    ||||||||| ||| ||||| || ||||| |||| | |||||||| |||||||||| | |||||||||||||||||    
T  30676976 ataacacacaagatttatcatggttcacacaaagcagactactttcagtccccacacttcgtgtgagattatcca 30676902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 114; Significance: 6e-58; HSPs: 26)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 90 - 239
Target Start/End: Complemental strand, 20714268 - 20714119
Alignment:
Q  90 agagagagaagaataacacacgagagttatcctgattcaccaaacccgactacttccagtccccacgcctcgtgtgagattatccactatagttttcttg 189  Q
    |||||||||||||||||||| ||||||||||||| ||||||||||||| ||||||||||||||||| |||||||||| |||||||| ||||||| |||||    
T  20714268 agagagagaagaataacacatgagagttatcctggttcaccaaacccggctacttccagtccccacacctcgtgtgacattatccattatagttgtcttg 20714169  T
Q  190 ctaacagaaacttctgactagcactacaagattttgatcacaccagatca 239  Q
    |||||||||||||||||||||||||| ||||| |||||||||||||||||    
T  20714168 ctaacagaaacttctgactagcactataagatcttgatcacaccagatca 20714119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 96 - 239
Target Start/End: Original strand, 7789073 - 7789216
Alignment:
Q  96 agaagaataacacacgagagttatcctgattcaccaaacccgactacttccagtccccacgcctcgtgtgagattatccactatagttttcttgctaaca 195  Q
    |||||||||||||| |||| |||| ||| ||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||    
T  7789073 agaagaataacacaggagaattattctggttcaccaaacccggctacttccagtccccacacctcgtgtgagattatccactatagttgtcttgctaaca 7789172  T
Q  196 gaaacttctgactagcactacaagattttgatcacaccagatca 239  Q
    |||||||||||||||||||||||  | |||||||||||||||||    
T  7789173 gaaacttctgactagcactacaatttcttgatcacaccagatca 7789216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 90 - 239
Target Start/End: Original strand, 33601762 - 33601910
Alignment:
Q  90 agagagagaagaataacacacgagagttatcctgattcaccaaacccgactacttccagtccccacgcctcgtgtgagattatccactatagttttcttg 189  Q
    |||||||||| ||||||||| ||||||||||||| |||||| || ||| ||||||||||||||||| | ||||||||||||||||||||||||||||  |    
T  33601762 agagagagaaaaataacacaggagagttatcctggttcacccaatccggctacttccagtccccacacttcgtgtgagattatccactatagttttc-ag 33601860  T
Q  190 ctaacagaaacttctgactagcactacaagattttgatcacaccagatca 239  Q
     | ||||||||||||||| | ||||| ||| | |||||||||| ||||||    
T  33601861 ttgacagaaacttctgaccaacactataaggtcttgatcacactagatca 33601910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 101 - 239
Target Start/End: Original strand, 31575411 - 31575548
Alignment:
Q  101 aataacacacgagagttatcctgattcaccaaacccgactacttccagtccccacgcctcgtgtgagattatccactatagttttcttgctaacagaaac 200  Q
    ||||||||| ||||||||||||| ||||||||| ||| ||||||||||||||||| | |||||||||||||||||||||||| |||  ||||  ||||||    
T  31575411 aataacacaagagagttatcctggttcaccaaatccggctacttccagtccccacacttcgtgtgagattatccactatagtattc-agctagtagaaac 31575509  T
Q  201 ttctgactagcactacaagattttgatcacaccagatca 239  Q
    |||| |||||||||| ||| | |||||||||||| ||||    
T  31575510 ttctaactagcactataaggtcttgatcacaccaaatca 31575548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 103 - 239
Target Start/End: Original strand, 24096077 - 24096213
Alignment:
Q  103 taacacacgagagttatcctgattcaccaaacccgactacttccagt-ccccacgcctcgtgtgagattatccactatagttttcttgctaacagaaact 201  Q
    ||||||| |||| |||| ||| |||||||||| |||||||||||||| |||||| ||||||||||||||||||||||||| | ||||||||||| |||||    
T  24096077 taacacaggagatttattctggttcaccaaactcgactacttccagtcccccacacctcgtgtgagattatccactatag-tatcttgctaacataaact 24096175  T
Q  202 tctgactagcactacaagattttgatcacaccagatca 239  Q
    | |||||||||||||||| | ||||| |||||| ||||    
T  24096176 tttgactagcactacaagttcttgattacaccatatca 24096213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 90 - 239
Target Start/End: Original strand, 33592123 - 33592271
Alignment:
Q  90 agagagagaagaataacacacgagagttatcctgattcaccaaacccgactacttccagtccccacgcctcgtgtgagattatccactatagttttcttg 189  Q
    |||||||||  ||||||||| ||||||||||||| |||||| || ||| ||||||||||||||||| | ||||||||||||||||||||||||||||  |    
T  33592123 agagagagagaaataacacaggagagttatcctggttcacccaatccggctacttccagtccccacacttcgtgtgagattatccactatagttttc-ag 33592221  T
Q  190 ctaacagaaacttctgactagcactacaagattttgatcacaccagatca 239  Q
     | ||||||||||||||| | ||||| ||| | |||||||||| ||||||    
T  33592222 ttgacagaaacttctgaccaacactataaggtcttgatcacactagatca 33592271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 90 - 182
Target Start/End: Complemental strand, 20030377 - 20030285
Alignment:
Q  90 agagagagaagaataacacacgagagttatcctgattcaccaaacccgactacttccagtccccacgcctcgtgtgagattatccactatagt 182  Q
    ||||| |||||||||||||| ||||||||||||| ||||||||||||| ||||||||||||||||| | ||||||||||||||||||||||||    
T  20030377 agagaaagaagaataacacaagagagttatcctggttcaccaaacccggctacttccagtccccacacttcgtgtgagattatccactatagt 20030285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 90 - 182
Target Start/End: Original strand, 42712167 - 42712259
Alignment:
Q  90 agagagagaagaataacacacgagagttatcctgattcaccaaacccgactacttccagtccccacgcctcgtgtgagattatccactatagt 182  Q
    ||||| |||||||||||||| ||||||||||||| ||||||||||||| ||||||||||||||||| | ||||||||||||||||||||||||    
T  42712167 agagaaagaagaataacacaggagagttatcctggttcaccaaacccggctacttccagtccccacacttcgtgtgagattatccactatagt 42712259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 90 - 182
Target Start/End: Complemental strand, 12915658 - 12915565
Alignment:
Q  90 agagagaga-agaataacacacgagagttatcctgattcaccaaacccgactacttccagtccccacgcctcgtgtgagattatccactatagt 182  Q
    ||||||||| ||||||||||| ||||||||||||| ||||||||||||| ||||||||||||||||| | ||||||||||||||||||||||||    
T  12915658 agagagagagagaataacacaggagagttatcctggttcaccaaacccggctacttccagtccccacacttcgtgtgagattatccactatagt 12915565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 90 - 182
Target Start/End: Complemental strand, 12925553 - 12925460
Alignment:
Q  90 agagagaga-agaataacacacgagagttatcctgattcaccaaacccgactacttccagtccccacgcctcgtgtgagattatccactatagt 182  Q
    ||||||||| ||||||||||| ||||||||||||| ||||| ||||||||||||||||||||||||| | ||||||||||||||||||||||||    
T  12925553 agagagagagagaataacacaggagagttatcctggttcacgaaacccgactacttccagtccccacacttcgtgtgagattatccactatagt 12925460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 111 - 239
Target Start/End: Complemental strand, 24634145 - 24634018
Alignment:
Q  111 gagagttatcctgattcaccaaacccgactacttccagtccccacgcctcgtgtgagattatccactatagttttcttgctaacagaaacttctgactag 210  Q
    ||||||||||||| |||  |||||||||||||||||||||||||| | |||||||| ||||||||||||||| |||  ||||  |||||||||| |||||    
T  24634145 gagagttatcctggttcctcaaacccgactacttccagtccccacacttcgtgtgatattatccactatagtattc-agctagtagaaacttctaactag 24634047  T
Q  211 cactacaagattttgatcacaccagatca 239  Q
    ||||| ||| | |||||||||||||||||    
T  24634046 cactataaggtcttgatcacaccagatca 24634018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 90 - 182
Target Start/End: Complemental strand, 20045016 - 20044924
Alignment:
Q  90 agagagagaagaataacacacgagagttatcctgattcaccaaacccgactacttccagtccccacgcctcgtgtgagattatccactatagt 182  Q
    ||||| |||||||||||||| ||||||||||||| ||||||||||||| |||| |||||||||||| | |||||||||||||||||| |||||    
T  20045016 agagaaagaagaataacacatgagagttatcctggttcaccaaacccggctacatccagtccccacacttcgtgtgagattatccacgatagt 20044924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 102 - 237
Target Start/End: Complemental strand, 15834137 - 15834003
Alignment:
Q  102 ataacacacgagagttatcctgattcaccaaacccgactacttccagtccccacgcctcgtgtgagattatccactatagttttcttgctaacagaaact 201  Q
    |||||||| |||| ||||| || ||||||||| ||| |||||| |||||| ||| ||||||||||||||||||| ||||| | || ||||||| ||||||    
T  15834137 ataacacaagagatttatcttggttcaccaaatccggctactttcagtccacacacctcgtgtgagattatccattatag-tatcatgctaactgaaact 15834039  T
Q  202 tctgactagcactacaagattttgatcacaccagat 237  Q
    |||||||||||||| ||| | |||| || |||||||    
T  15834038 tctgactagcactataagttcttgaccataccagat 15834003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 111 - 182
Target Start/End: Complemental strand, 18252006 - 18251935
Alignment:
Q  111 gagagttatcctgattcaccaaacccgactacttccagtccccacgcctcgtgtgagattatccactatagt 182  Q
    ||||||||||||||||||||||| ||| ||||||||||||||||| | ||||||||||||||||||||||||    
T  18252006 gagagttatcctgattcaccaaatccggctacttccagtccccacacttcgtgtgagattatccactatagt 18251935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 99 - 181
Target Start/End: Original strand, 18143427 - 18143509
Alignment:
Q  99 agaataacacacgagagttatcctgattcaccaaacccgactacttccagtccccacgcctcgtgtgagattatccactatag 181  Q
    ||||||||||| |||||||||| || ||||||||| ||| ||||||||||||||||| | |||||||||||||||||||||||    
T  18143427 agaataacacaggagagttatcttggttcaccaaatccggctacttccagtccccacacttcgtgtgagattatccactatag 18143509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 104 - 182
Target Start/End: Original strand, 18883163 - 18883241
Alignment:
Q  104 aacacacgagagttatcctgattcaccaaacccgactacttccagtccccacgcctcgtgtgagattatccactatagt 182  Q
    |||||| ||||||||||||| ||||||||| ||| ||||||||||||||||| | ||||||||||||||||||||||||    
T  18883163 aacacaggagagttatcctggttcaccaaatccggctacttccagtccccacacttcgtgtgagattatccactatagt 18883241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 99 - 182
Target Start/End: Original strand, 4843720 - 4843803
Alignment:
Q  99 agaataacacacgagagttatcctgattcaccaaacccgactacttccagtccccacgcctcgtgtgagattatccactatagt 182  Q
    ||||||||| | ||||||||||||| ||||| ||| ||| ||||||||||||||||| | ||||||||||||||||||||||||    
T  4843720 agaataacaaaggagagttatcctggttcactaaatccggctacttccagtccccacacttcgtgtgagattatccactatagt 4843803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 111 - 182
Target Start/End: Complemental strand, 18233104 - 18233033
Alignment:
Q  111 gagagttatcctgattcaccaaacccgactacttccagtccccacgcctcgtgtgagattatccactatagt 182  Q
    ||||||||||||| ||||||||| ||| ||||||||||||||||| | ||||||||||||||||||||||||    
T  18233104 gagagttatcctggttcaccaaatccggctacttccagtccccacacttcgtgtgagattatccactatagt 18233033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 111 - 182
Target Start/End: Complemental strand, 18242555 - 18242484
Alignment:
Q  111 gagagttatcctgattcaccaaacccgactacttccagtccccacgcctcgtgtgagattatccactatagt 182  Q
    ||||||||||||| ||||||||| ||| ||||||||||||||||| | ||||||||||||||||||||||||    
T  18242555 gagagttatcctggttcaccaaatccggctacttccagtccccacacttcgtgtgagattatccactatagt 18242484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 99 - 166
Target Start/End: Complemental strand, 20714484 - 20714417
Alignment:
Q  99 agaataacacacgagagttatcctgattcaccaaacccgactacttccagtccccacgcctcgtgtga 166  Q
    ||||||||||| ||||||||||||| ||||||||||||| ||||||||||||||||| ||||||||||    
T  20714484 agaataacacatgagagttatcctggttcaccaaacccggctacttccagtccccacacctcgtgtga 20714417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 90 - 239
Target Start/End: Complemental strand, 12767831 - 12767681
Alignment:
Q  90 agagagagaagaataacacacgagagttatcctgattcaccaaacccgactacttc--cagtccccacgcctcgtgtgagattatccactatagttttc- 186  Q
    ||||| |||||||||||||| ||||||||||||| |||||||| ||||  ||||||  ||||||||||   |||||||||||||||||||||||| |||     
T  12767831 agagaaagaagaataacacaggagagttatcctggttcaccaatcccggttacttccacagtccccacatttcgtgtgagattatccactatagtattca 12767732  T
Q  187 -ttgctaacagaaacttctgactagcactacaagattttgatcacaccagatca 239  Q
     ||| |   |||||||||| || | ||||| ||| | |||||||||||||||||    
T  12767731 gttggt---agaaacttctaaccaacactataaggtcttgatcacaccagatca 12767681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 101 - 182
Target Start/End: Original strand, 25037026 - 25037107
Alignment:
Q  101 aataacacacgagagttatcctgattcaccaaacccgactacttccagtccccacgcctcgtgtgagattatccactatagt 182  Q
    ||||||||| |||||||||| || |||||| || | | ||||||||||||||||| | ||||||||||||||||||||||||    
T  25037026 aataacacaagagagttatcttggttcacccaatctggctacttccagtccccacacttcgtgtgagattatccactatagt 25037107  T

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Target: chr8; HSP #23
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 101 - 182
Target Start/End: Original strand, 25051063 - 25051144
Alignment:
Q  101 aataacacacgagagttatcctgattcaccaaacccgactacttccagtccccacgcctcgtgtgagattatccactatagt 182  Q
    ||||||||| |||||||||| || |||||| || | | ||||||||||||||||| | ||||||||||||||||||||||||    
T  25051063 aataacacaagagagttatcttggttcacccaatctggctacttccagtccccacacttcgtgtgagattatccactatagt 25051144  T

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Target: chr8; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 126 - 239
Target Start/End: Original strand, 42896174 - 42896286
Alignment:
Q  126 tcaccaaacccgactacttccagtccccacgcctcgtgtgagattatccactatagttttcttgctaacagaaacttctgactagcactacaagattttg 225  Q
    ||||| || ||| |||||||||||| |||| | ||||||||||||||||||||||| ||||  | | | |||||||||| || | ||||| ||| | |||    
T  42896174 tcacccaatccggctacttccagtctccacacttcgtgtgagattatccactatagatttc-agttgatagaaacttctaaccaacactataaggtcttg 42896272  T
Q  226 atcacaccagatca 239  Q
    ||||||||||||||    
T  42896273 atcacaccagatca 42896286  T

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Target: chr8; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 19 - 59
Target Start/End: Original strand, 7788972 - 7789012
Alignment:
Q  19 attattttagcaaggaccagaatgttctggagattaataaa 59  Q
    ||||||||| || ||||||||||||||||||||||||||||    
T  7788972 attattttaacacggaccagaatgttctggagattaataaa 7789012  T

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Target: chr8; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 104 - 155
Target Start/End: Original strand, 26194048 - 26194099
Alignment:
Q  104 aacacacgagagttatcctgattcaccaaacccgactacttccagtccccac 155  Q
    |||||| ||||||||||||| |||| ||||||| |||||||| |||||||||    
T  26194048 aacacatgagagttatcctggttcatcaaacccaactacttctagtccccac 26194099  T

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Target: scaffold0028 (Bit Score: 113; Significance: 2e-57; HSPs: 4)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 88 - 239
Target Start/End: Original strand, 94417 - 94569
Alignment:
Q  88 aaagagagaga-agaataacacacgagagttatcctgattcaccaaacccgactacttccagtccccacgcctcgtgtgagattatccactatagttttc 186  Q
    ||||||||||| ||||||||||| ||||||||||||| ||||| ||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||    
T  94417 aaagagagagagagaataacacaggagagttatcctggttcactaaacccggctacttccagtccccacacctcgtgtgagattatccactatagttttc 94516  T
Q  187 ttgctaacagaaacttctgactagcactacaagattttgatcacaccagatca 239  Q
    ||||||||||||||||||||||||||||||||  | |||||||||||||||||    
T  94517 ttgctaacagaaacttctgactagcactacaatttcttgatcacaccagatca 94569  T

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Target: scaffold0028; HSP #2
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 90 - 239
Target Start/End: Original strand, 103860 - 104010
Alignment:
Q  90 agagagaga-agaataacacacgagagttatcctgattcaccaaacccgactacttccagtccccacgcctcgtgtgagattatccactatagttttctt 188  Q
    ||||||||| ||||||||||| ||||||||||||| ||||||||||||| ||| ||||||||||||| ||||||||||||||||||||||||||||||||    
T  103860 agagagagagagaataacacaggagagttatcctggttcaccaaacccggctaattccagtccccacacctcgtgtgagattatccactatagttttctt 103959  T
Q  189 gctaacagaaacttctgactagcactacaagattttgatcacaccagatca 239  Q
    ||||||||||||||||||||||||||||||  | |||||||||||||||||    
T  103960 gctaacagaaacttctgactagcactacaatttcttgatcacaccagatca 104010  T

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Target: scaffold0028; HSP #3
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 14 - 98
Target Start/End: Original strand, 103748 - 103834
Alignment:
Q  14 aaaagattattttagcaaggaccagaatgttctggagattaataaaataa--tgtgtgtgttgtgtaactttaaataaagagagaga 98  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||    
T  103748 aaaagattattttagcaaggaccagaatgttctggagattaataaaataatgtgtgtgtgttgtgtaactttaaataaagagagaga 103834  T

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Target: scaffold0028; HSP #4
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 14 - 98
Target Start/End: Original strand, 94305 - 94391
Alignment:
Q  14 aaaagattattttagcaaggaccagaatgttctggagattaataaaataa--tgtgtgtgttgtgtaactttaaataaagagagaga 98  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||| ||||||||||||||||||||||||    
T  94305 aaaagattattttagcaaggaccagaatgttctggagattaataaaataatgtgtgtgtgttatgtaactttaaataaagagagaga 94391  T

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Target: scaffold0482 (Bit Score: 104; Significance: 6e-52; HSPs: 2)
Name: scaffold0482
Description:

Target: scaffold0482; HSP #1
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 96 - 239
Target Start/End: Complemental strand, 3726 - 3583
Alignment:
Q  96 agaagaataacacacgagagttatcctgattcaccaaacccgactacttccagtccccacgcctcgtgtgagattatccactatagttttcttgctaaca 195  Q
    |||||||||||||| |||| |||| ||| ||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||    
T  3726 agaagaataacacaggagaattattctggttcaccaaacccggctacttccagtccccacacctcgtgtgagattatccactatagttgtcttgctaaca 3627  T
Q  196 gaaacttctgactagcactacaagattttgatcacaccagatca 239  Q
    |||||||||||||||||||||||  | |||||||||||||||||    
T  3626 gaaacttctgactagcactacaatttcttgatcacaccagatca 3583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0482; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 19 - 59
Target Start/End: Complemental strand, 3827 - 3787
Alignment:
Q  19 attattttagcaaggaccagaatgttctggagattaataaa 59  Q
    ||||||||| || ||||||||||||||||||||||||||||    
T  3827 attattttaacacggaccagaatgttctggagattaataaa 3787  T

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Target: scaffold0206 (Bit Score: 69; Significance: 4e-31; HSPs: 1)
Name: scaffold0206
Description:

Target: scaffold0206; HSP #1
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 90 - 182
Target Start/End: Complemental strand, 2307 - 2215
Alignment:
Q  90 agagagagaagaataacacacgagagttatcctgattcaccaaacccgactacttccagtccccacgcctcgtgtgagattatccactatagt 182  Q
    ||||| |||||||||||||| ||||||||||||| ||||||||||||| ||||||||||||||||| | ||||||||||||||||||||||||    
T  2307 agagaaagaagaataacacaagagagttatcctggttcaccaaacccggctacttccagtccccacacttcgtgtgagattatccactatagt 2215  T

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Target: scaffold0053 (Bit Score: 57; Significance: 6e-24; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 90 - 182
Target Start/End: Original strand, 2250 - 2342
Alignment:
Q  90 agagagagaagaataacacacgagagttatcctgattcaccaaacccgactacttccagtccccacgcctcgtgtgagattatccactatagt 182  Q
    |||||||||||||||||||| ||||||||||||| |||||| || ||| ||||||| ||||||||| | || |||||||||||||||||||||    
T  2250 agagagagaagaataacacaggagagttatcctggttcacccaatccggctacttctagtccccacacttcttgtgagattatccactatagt 2342  T

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Target: scaffold0021 (Bit Score: 53; Significance: 2e-21; HSPs: 2)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 90 - 182
Target Start/End: Complemental strand, 124245 - 124153
Alignment:
Q  90 agagagagaagaataacacacgagagttatcctgattcaccaaacccgactacttccagtccccacgcctcgtgtgagattatccactatagt 182  Q
    ||||| |||||||||||||| ||||||||||||| |||| |||| ||   |||||||||||||||| | ||||||||||||||||||||||||    
T  124245 agagaaagaagaataacacaggagagttatcctggttcatcaaatcctgttacttccagtccccacacttcgtgtgagattatccactatagt 124153  T

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Target: scaffold0021; HSP #2
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 144 - 239
Target Start/End: Complemental strand, 100125 - 100031
Alignment:
Q  144 tccagtccccacgcctcgtgtgagattatccactatagttttcttgctaacagaaacttctgactagcactacaagattttgatcacaccagatca 239  Q
    |||||||||||| |  |||||||||||||||| |||||| | || |||| ||||||||||||| |||||||| || || |||||||||||| ||||    
T  100125 tccagtccccacactacgtgtgagattatccattatagtatcct-gctatcagaaacttctgaatagcactataatatgttgatcacaccaaatca 100031  T

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Target: scaffold0334 (Bit Score: 52; Significance: 6e-21; HSPs: 1)
Name: scaffold0334
Description:

Target: scaffold0334; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 90 - 185
Target Start/End: Original strand, 12537 - 12632
Alignment:
Q  90 agagagagaagaataacacacgagagttatcctgattcaccaaacccgactacttccagtccccacgcctcgtgtgagattatccactatagtttt 185  Q
    |||||||||  ||||||| | ||||||||||||| |||||| || ||| |||||||||||||| || | |||||||||||||||||||||||||||    
T  12537 agagagagagaaataacataggagagttatcctggttcacccaatccggctacttccagtccctacacttcgtgtgagattatccactatagtttt 12632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010 (Bit Score: 51; Significance: 2e-20; HSPs: 1)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 104 - 182
Target Start/End: Complemental strand, 257142 - 257064
Alignment:
Q  104 aacacacgagagttatcctgattcaccaaacccgactacttccagtccccacgcctcgtgtgagattatccactatagt 182  Q
    |||||| ||||||||||||| ||||||||| ||| ||||||||||||||||| | |||||||| |||||||||||||||    
T  257142 aacacaggagagttatcctggttcaccaaatccggctacttccagtccccacacttcgtgtgaaattatccactatagt 257064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0269 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold0269
Description:

Target: scaffold0269; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 139 - 239
Target Start/End: Original strand, 14852 - 14951
Alignment:
Q  139 ctacttccagtccccacgcctcgtgtgagattatccactatagttttcttgctaacagaaacttctgactagcactacaagattttgatcacaccagatc 238  Q
    |||| |||||||||||| |  ||||||||||||||||||||||| | || |||| ||||||||||||| |||||||| || || ||||||||||||||||    
T  14852 ctacgtccagtccccacactacgtgtgagattatccactatagtatcct-gctatcagaaacttctgaatagcactataatatgttgatcacaccagatc 14950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0247 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold0247
Description:

Target: scaffold0247; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 139 - 239
Target Start/End: Complemental strand, 24740 - 24641
Alignment:
Q  139 ctacttccagtccccacgcctcgtgtgagattatccactatagttttcttgctaacagaaacttctgactagcactacaagattttgatcacaccagatc 238  Q
    |||| |||||||||||| |  ||||||||||||||||||||||| | || |||| ||||||||||||| |||||||| || || ||||||||||||||||    
T  24740 ctacgtccagtccccacactacgtgtgagattatccactatagtatcct-gctatcagaaacttctgaatagcactataatatgttgatcacaccagatc 24642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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