View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF15370_high_3 (Length: 274)

Name: NF15370_high_3
Description: NF15370
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF15370_high_3
NF15370_high_3
[»] chr1 (59 HSPs)
chr1 (11-260)||(45580902-45581157)
chr1 (30-162)||(15306503-15306635)
chr1 (19-151)||(23915606-23915738)
chr1 (24-160)||(50447345-50447481)
chr1 (34-160)||(21680656-21680782)
chr1 (30-161)||(44596527-44596658)
chr1 (59-161)||(36119110-36119212)
chr1 (11-159)||(45653433-45653580)
chr1 (51-161)||(12224574-12224684)
chr1 (30-160)||(24575919-24576049)
chr1 (30-160)||(28006360-28006490)
chr1 (24-161)||(29677518-29677655)
chr1 (33-163)||(30251437-30251568)
chr1 (30-161)||(31869604-31869735)
chr1 (62-160)||(7841665-7841762)
chr1 (19-161)||(47602861-47603003)
chr1 (30-155)||(31816578-31816703)
chr1 (25-161)||(15257170-15257306)
chr1 (19-162)||(24469815-24469958)
chr1 (13-160)||(25124885-25125032)
chr1 (19-160)||(32179857-32179998)
chr1 (44-161)||(35810742-35810859)
chr1 (19-160)||(36419100-36419241)
chr1 (30-150)||(5204479-5204599)
chr1 (52-160)||(14101895-14102003)
chr1 (24-160)||(38061178-38061314)
chr1 (45-160)||(7016075-7016190)
chr1 (24-151)||(7596397-7596524)
chr1 (25-160)||(15014320-15014455)
chr1 (30-161)||(39802766-39802897)
chr1 (11-153)||(19508519-19508661)
chr1 (24-161)||(7702839-7702976)
chr1 (13-156)||(3577663-3577807)
chr1 (24-151)||(40159639-40159766)
chr1 (25-151)||(20349151-20349277)
chr1 (59-160)||(6413278-6413379)
chr1 (24-161)||(42916113-42916250)
chr1 (71-160)||(47983306-47983395)
chr1 (44-160)||(14578585-14578701)
chr1 (24-160)||(27076515-27076651)
chr1 (30-160)||(7995981-7996111)
chr1 (19-160)||(23916809-23916950)
chr1 (11-160)||(43087466-43087615)
chr1 (11-160)||(46264944-46265093)
chr1 (25-151)||(20347671-20347797)
chr1 (19-161)||(42937073-42937215)
chr1 (19-161)||(48575079-48575221)
chr1 (103-160)||(7956407-7956464)
chr1 (19-160)||(37441186-37441327)
chr1 (73-160)||(20903949-20904036)
chr1 (35-157)||(15662964-15663086)
chr1 (71-149)||(51432149-51432227)
chr1 (19-96)||(14770580-14770657)
chr1 (19-83)||(8828303-8828367)
chr1 (91-159)||(9381756-9381824)
chr1 (11-163)||(13645177-13645329)
chr1 (24-156)||(14796592-14796724)
chr1 (24-156)||(14805466-14805598)
chr1 (63-128)||(14725354-14725419)
[»] chr2 (33 HSPs)
chr2 (25-160)||(3409188-3409323)
chr2 (24-156)||(24844670-24844802)
chr2 (34-150)||(17616281-17616397)
chr2 (19-157)||(44740486-44740624)
chr2 (22-160)||(41959145-41959283)
chr2 (44-160)||(27464572-27464688)
chr2 (71-163)||(29806957-29807049)
chr2 (24-160)||(40458925-40459061)
chr2 (19-151)||(41332230-41332362)
chr2 (24-157)||(11006977-11007108)
chr2 (19-160)||(27634670-27634811)
chr2 (13-159)||(30713149-30713295)
chr2 (48-161)||(27902438-27902551)
chr2 (19-160)||(33831494-33831635)
chr2 (11-151)||(2646983-2647123)
chr2 (13-160)||(11027901-11028048)
chr2 (30-160)||(36538666-36538796)
chr2 (30-119)||(2578089-2578178)
chr2 (24-156)||(17368994-17369125)
chr2 (30-154)||(45383144-45383268)
chr2 (19-161)||(9963758-9963900)
chr2 (92-161)||(28968892-28968961)
chr2 (19-151)||(26436353-26436484)
chr2 (30-150)||(33163990-33164110)
chr2 (65-160)||(40680255-40680349)
chr2 (24-160)||(13829882-13830018)
chr2 (29-160)||(16544015-16544146)
chr2 (102-157)||(10412522-10412577)
chr2 (19-148)||(34064704-34064833)
chr2 (60-131)||(31000880-31000951)
chr2 (13-160)||(34116173-34116320)
chr2 (71-161)||(20203713-20203803)
chr2 (24-116)||(38409615-38409707)
[»] chr7 (55 HSPs)
chr7 (25-163)||(33124705-33124843)
chr7 (30-160)||(33171534-33171664)
chr7 (19-160)||(33935512-33935653)
chr7 (30-160)||(23226999-23227129)
chr7 (30-160)||(23236152-23236282)
chr7 (24-160)||(22075072-22075208)
chr7 (19-149)||(10618925-10619055)
chr7 (65-159)||(41449790-41449884)
chr7 (19-160)||(44421901-44422043)
chr7 (24-160)||(7447885-7448021)
chr7 (24-160)||(26719824-26719960)
chr7 (24-160)||(32356970-32357106)
chr7 (24-160)||(33898944-33899080)
chr7 (24-159)||(18249994-18250129)
chr7 (30-160)||(17025361-17025491)
chr7 (11-160)||(11595796-11595945)
chr7 (19-160)||(21760583-21760724)
chr7 (19-160)||(37334282-37334423)
chr7 (24-160)||(36472448-36472584)
chr7 (19-162)||(20401000-20401143)
chr7 (30-160)||(46573612-46573742)
chr7 (30-160)||(49034224-49034354)
chr7 (19-160)||(222226-222367)
chr7 (11-151)||(45055724-45055864)
chr7 (30-154)||(48634462-48634586)
chr7 (30-161)||(18740217-18740348)
chr7 (47-161)||(35543555-35543669)
chr7 (19-161)||(42072087-42072229)
chr7 (19-161)||(45176249-45176391)
chr7 (19-160)||(5776130-5776271)
chr7 (19-160)||(43052876-43053017)
chr7 (13-161)||(3942174-3942322)
chr7 (19-161)||(5794935-5795077)
chr7 (88-157)||(33019374-33019443)
chr7 (25-161)||(665846-665982)
chr7 (25-160)||(37401566-37401701)
chr7 (11-160)||(40480050-40480200)
chr7 (71-156)||(31491871-31491956)
chr7 (24-160)||(10096480-10096616)
chr7 (19-159)||(36927003-36927143)
chr7 (58-157)||(33140805-33140904)
chr7 (24-160)||(17608721-17608854)
chr7 (35-161)||(27231538-27231664)
chr7 (19-156)||(3930720-3930857)
chr7 (71-164)||(24128496-24128589)
chr7 (19-160)||(28949758-28949899)
chr7 (19-160)||(48505795-48505929)
chr7 (35-160)||(37106846-37106971)
chr7 (89-161)||(6866680-6866752)
chr7 (19-98)||(26216276-26216355)
chr7 (25-146)||(29037794-29037915)
chr7 (33-111)||(49001035-49001113)
chr7 (58-151)||(388989-389082)
chr7 (19-83)||(15434247-15434311)
chr7 (102-146)||(46652647-46652691)
[»] chr4 (64 HSPs)
chr4 (30-160)||(11055226-11055356)
chr4 (30-160)||(26632946-26633076)
chr4 (24-160)||(22184507-22184643)
chr4 (24-151)||(51995082-51995209)
chr4 (30-151)||(12673037-12673158)
chr4 (20-161)||(15697082-15697223)
chr4 (33-161)||(48151125-48151253)
chr4 (58-161)||(4274555-4274658)
chr4 (12-159)||(19455159-19455306)
chr4 (30-160)||(49405635-49405765)
chr4 (11-159)||(7505520-7505668)
chr4 (24-160)||(13455705-13455841)
chr4 (33-160)||(46944544-46944671)
chr4 (19-160)||(12789552-12789693)
chr4 (19-160)||(52813600-52813741)
chr4 (11-160)||(56224136-56224285)
chr4 (65-161)||(9959377-9959472)
chr4 (25-157)||(27891392-27891523)
chr4 (30-161)||(48731172-48731303)
chr4 (30-160)||(48802475-48802606)
chr4 (30-160)||(80507-80637)
chr4 (71-161)||(51407948-51408038)
chr4 (58-163)||(38791730-38791834)
chr4 (24-160)||(40797834-40797970)
chr4 (74-161)||(28265672-28265759)
chr4 (24-154)||(36156300-36156430)
chr4 (74-160)||(55891985-55892071)
chr4 (24-160)||(9469781-9469917)
chr4 (19-160)||(21441580-21441721)
chr4 (19-160)||(53369871-53370012)
chr4 (45-161)||(13761824-13761940)
chr4 (24-160)||(36543785-36543921)
chr4 (24-160)||(50146918-50147054)
chr4 (48-154)||(34980510-34980616)
chr4 (19-161)||(50606007-50606149)
chr4 (24-154)||(52733707-52733836)
chr4 (19-160)||(24007903-24008044)
chr4 (19-160)||(48977575-48977716)
chr4 (11-160)||(52706208-52706357)
chr4 (19-161)||(45674834-45674976)
chr4 (19-160)||(19852977-19853118)
chr4 (71-160)||(36643985-36644073)
chr4 (103-160)||(50710784-50710841)
chr4 (24-160)||(1803502-1803633)
chr4 (88-151)||(9222141-9222204)
chr4 (11-160)||(22721319-22721467)
chr4 (24-161)||(48339098-48339235)
chr4 (11-155)||(49083239-49083383)
chr4 (13-160)||(6866109-6866250)
chr4 (71-155)||(28470870-28470953)
chr4 (74-161)||(43387311-43387398)
chr4 (62-156)||(9874212-9874306)
chr4 (25-147)||(44791256-44791378)
chr4 (123-160)||(25134665-25134702)
chr4 (33-150)||(34718152-34718269)
chr4 (109-160)||(44378327-44378378)
chr4 (19-160)||(24550076-24550217)
chr4 (11-160)||(9906356-9906505)
chr4 (19-128)||(43798255-43798364)
chr4 (19-98)||(49820981-49821060)
chr4 (131-161)||(49821070-49821100)
chr4 (24-92)||(25134578-25134646)
chr4 (103-151)||(39736766-39736814)
chr4 (121-161)||(49376769-49376809)
[»] chr3 (35 HSPs)
chr3 (11-161)||(9505120-9505270)
chr3 (30-160)||(52934822-52934952)
chr3 (30-160)||(12710712-12710842)
chr3 (19-160)||(52199428-52199569)
chr3 (30-161)||(25253712-25253843)
chr3 (30-160)||(30662131-30662261)
chr3 (30-161)||(39469530-39469661)
chr3 (19-160)||(32689168-32689309)
chr3 (31-151)||(28242594-28242714)
chr3 (24-160)||(39135358-39135494)
chr3 (24-160)||(40943565-40943701)
chr3 (30-161)||(33438730-33438861)
chr3 (11-152)||(18074567-18074708)
chr3 (44-160)||(54393443-54393559)
chr3 (30-160)||(20550202-20550332)
chr3 (33-159)||(26049541-26049667)
chr3 (14-151)||(39942809-39942946)
chr3 (103-160)||(54432177-54432234)
chr3 (50-150)||(1674659-1674759)
chr3 (44-160)||(30743596-30743712)
chr3 (24-160)||(46293213-46293349)
chr3 (59-161)||(19560773-19560875)
chr3 (19-151)||(41609887-41610018)
chr3 (22-156)||(26136335-26136469)
chr3 (24-158)||(23206310-23206443)
chr3 (30-161)||(44574536-44574667)
chr3 (30-156)||(15822353-15822479)
chr3 (11-163)||(5418669-5418821)
chr3 (73-141)||(48730856-48730924)
chr3 (34-151)||(28687086-28687203)
chr3 (45-159)||(55203066-55203182)
chr3 (59-150)||(33896829-33896920)
chr3 (11-108)||(50965394-50965492)
chr3 (11-108)||(51068529-51068627)
chr3 (19-77)||(52199388-52199446)
[»] chr6 (23 HSPs)
chr6 (30-160)||(1501858-1501988)
chr6 (24-160)||(4441301-4441437)
chr6 (24-161)||(3081717-3081854)
chr6 (11-162)||(5640250-5640401)
chr6 (45-160)||(6999292-6999407)
chr6 (24-160)||(13312026-13312164)
chr6 (30-165)||(17441168-17441303)
chr6 (24-160)||(7437308-7437444)
chr6 (11-157)||(33110449-33110595)
chr6 (19-154)||(18095518-18095653)
chr6 (19-154)||(18099815-18099950)
chr6 (24-160)||(10961796-10961932)
chr6 (72-160)||(11460014-11460102)
chr6 (19-160)||(10346720-10346861)
chr6 (77-160)||(8200688-8200771)
chr6 (65-151)||(12428921-12429007)
chr6 (69-138)||(8596858-8596927)
chr6 (30-114)||(32163551-32163635)
chr6 (44-151)||(9463363-9463470)
chr6 (13-94)||(9950826-9950907)
chr6 (45-121)||(17507308-17507384)
chr6 (24-99)||(27984951-27985026)
chr6 (11-163)||(22295907-22296059)
[»] chr5 (42 HSPs)
chr5 (11-160)||(1840687-1840836)
chr5 (25-160)||(31021868-31022003)
chr5 (13-160)||(41783318-41783465)
chr5 (24-161)||(3801363-3801500)
chr5 (24-155)||(19282119-19282250)
chr5 (70-160)||(10327980-10328070)
chr5 (47-161)||(27196104-27196218)
chr5 (30-160)||(32945021-32945151)
chr5 (24-164)||(38522857-38522997)
chr5 (11-157)||(39414172-39414319)
chr5 (24-160)||(27450581-27450717)
chr5 (19-163)||(31620867-31621011)
chr5 (11-150)||(14500716-14500855)
chr5 (74-160)||(5382825-5382911)
chr5 (11-161)||(26218038-26218188)
chr5 (19-160)||(27906097-27906238)
chr5 (13-161)||(20188966-20189114)
chr5 (24-160)||(39407410-39407546)
chr5 (30-160)||(29328054-29328183)
chr5 (19-156)||(18880191-18880328)
chr5 (24-160)||(10493989-10494125)
chr5 (24-160)||(26298315-26298451)
chr5 (24-160)||(34719657-34719793)
chr5 (30-141)||(40056382-40056493)
chr5 (58-162)||(15933201-15933305)
chr5 (24-160)||(34724754-34724890)
chr5 (71-150)||(26299898-26299977)
chr5 (71-160)||(19716234-19716318)
chr5 (88-160)||(28247478-28247550)
chr5 (59-146)||(3457869-3457956)
chr5 (11-126)||(11136041-11136155)
chr5 (30-160)||(34857357-34857487)
chr5 (103-160)||(39409209-39409266)
chr5 (89-161)||(1091192-1091264)
chr5 (44-151)||(20190594-20190700)
chr5 (62-156)||(17168447-17168541)
chr5 (71-149)||(28431106-28431184)
chr5 (47-116)||(1225378-1225447)
chr5 (47-155)||(24202729-24202837)
chr5 (25-157)||(24536012-24536144)
chr5 (71-163)||(36523806-36523898)
chr5 (11-148)||(30660919-30661056)
[»] chr8 (19 HSPs)
chr8 (30-162)||(3307944-3308076)
chr8 (40-150)||(32740659-32740769)
chr8 (60-161)||(39478090-39478191)
chr8 (58-151)||(43384832-43384925)
chr8 (31-161)||(9135963-9136093)
chr8 (11-160)||(9412524-9412673)
chr8 (11-161)||(43967501-43967651)
chr8 (19-160)||(453482-453623)
chr8 (24-160)||(33279977-33280113)
chr8 (13-150)||(27189092-27189229)
chr8 (74-150)||(1091781-1091857)
chr8 (19-151)||(11161571-11161703)
chr8 (58-160)||(12378390-12378492)
chr8 (47-156)||(22564033-22564142)
chr8 (11-160)||(34655026-34655175)
chr8 (44-151)||(34516162-34516269)
chr8 (48-160)||(24854627-24854739)
chr8 (24-119)||(23181159-23181254)
chr8 (59-160)||(17865388-17865489)
[»] scaffold0171 (1 HSPs)
scaffold0171 (19-160)||(21087-21227)
[»] scaffold0223 (1 HSPs)
scaffold0223 (30-160)||(14436-14566)
[»] scaffold0025 (1 HSPs)
scaffold0025 (30-160)||(11400-11530)
[»] scaffold0260 (2 HSPs)
scaffold0260 (25-151)||(11474-11600)
scaffold0260 (25-151)||(9994-10120)
[»] scaffold0316 (1 HSPs)
scaffold0316 (19-160)||(19295-19436)
[»] scaffold0224 (1 HSPs)
scaffold0224 (24-161)||(7307-7444)
[»] scaffold0135 (1 HSPs)
scaffold0135 (88-151)||(32794-32857)
[»] scaffold0204 (1 HSPs)
scaffold0204 (24-161)||(26620-26757)
[»] scaffold0022 (1 HSPs)
scaffold0022 (25-151)||(124490-124616)
[»] scaffold0444 (2 HSPs)
scaffold0444 (109-160)||(779-830)
scaffold0444 (19-99)||(828-908)
[»] scaffold0002 (1 HSPs)
scaffold0002 (71-160)||(96331-96420)
[»] scaffold0192 (1 HSPs)
scaffold0192 (11-99)||(25627-25714)
[»] scaffold0063 (1 HSPs)
scaffold0063 (71-151)||(51311-51391)


Alignment Details
Target: chr1 (Bit Score: 201; Significance: 1e-110; HSPs: 59)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 201; E-Value: 1e-110
Query Start/End: Original strand, 11 - 260
Target Start/End: Complemental strand, 45581157 - 45580902
Alignment:
Q  11 atatatatctcatgttcatctcatttagttaatgaacttaattttccgctcaagttcagttcatttggttcataaatcaagttcaacgagataattatcg 110  Q
    ||||||| || |||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||| || |||||||||||||||||||||||    
T  45581157 atatatagctaatgttcatctcatttagttaatgaacttaattttccgctcaagttcaactcatttggttcatgaaccaagttcaacgagataattatcg 45581058  T
Q  111 aatcgagtttcgaactattttcgagttggttcggttcattgtcagccc------tacataacttaataattgatcataactacctaactcaagtcctaat 204  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||      ||||||||||||||||||||||||||||||||||||||||||||||    
T  45581057 aatcgagtttcgaactattttcaagttggttcggttcattgtcagccctactcgtacataacttaataattgatcataactacctaactcaagtcctaat 45580958  T
Q  205 agtataagatatagtttgagtttgttataagtgattagagtttgataaagatagtt 260  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  45580957 agtataagatatagtttgagattgttataagtgattagagtttgataaagatagtt 45580902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 30 - 162
Target Start/End: Original strand, 15306503 - 15306635
Alignment:
Q  30 ctcatttagttaatgaacttaattttccgctcaagttcagttcatttggttcataaatcaagttcaacgagataattatcgaatcgagtttcgaactatt 129  Q
    |||||||| ||||||||||||||||||||||||||||||| ||||||||||||| || ||||||||| ||  |||||||||||||||||| |||||||||    
T  15306503 ctcatttatttaatgaacttaattttccgctcaagttcagctcatttggttcatgaaccaagttcaatgaattaattatcgaatcgagttccgaactatt 15306602  T
Q  130 ttcgagttggttcggttcattgtcagccctaca 162  Q
     || |||||||||||||||||| ||||||||||    
T  15306603 gtcaagttggttcggttcattgccagccctaca 15306635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 19 - 151
Target Start/End: Complemental strand, 23915738 - 23915606
Alignment:
Q  19 ctcatgttcatctcatttagttaatgaacttaattttccgctcaagttcagttcatttggttcataaatcaagttcaacgagataattatcgaatcgagt 118  Q
    |||| ||||| |||||||| |||||||||||||||||| ||| |||||||| ||||||||||||| || ||||||||||||||||||| | |||||||||    
T  23915738 ctcaagttcaactcatttatttaatgaacttaattttcagctaaagttcagctcatttggttcatgaaccaagttcaacgagataattgttgaatcgagt 23915639  T
Q  119 ttcgaactattttcgagttggttcggttcattg 151  Q
    |||||||| || ||||||||||||| |||||||    
T  23915638 ttcgaacttttgtcgagttggttcgattcattg 23915606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 24 - 160
Target Start/End: Original strand, 50447345 - 50447481
Alignment:
Q  24 gttcatctcatttagttaatgaacttaattttccgctcaagttcagttcatttggttcataaatcaagttcaacgagataattatcgaatcgagtttcga 123  Q
    ||||| |||||||| |||| ||||||||||||  | |||||||| | |||||||||||||||| |||||| |||||  ||||||||||||||||| ||||    
T  50447345 gttcaactcatttatttaacgaacttaattttaagttcaagttcggctcatttggttcataaaccaagtttaacgaattaattatcgaatcgagtctcga 50447444  T
Q  124 actattttcgagttggttcggttcattgtcagcccta 160  Q
    |||||||||||||||||| ||||||||||||||||||    
T  50447445 actattttcgagttggtttggttcattgtcagcccta 50447481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 34 - 160
Target Start/End: Complemental strand, 21680782 - 21680656
Alignment:
Q  34 tttagttaatgaacttaattttccgctcaagttcagttcatttggttcataaatcaagttcaacgagataattatcgaatcgagtttcgaactattttcg 133  Q
    ||||| ||| ||||||||||||  |||||||||| | ||||||  |||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  21680782 tttagctaacgaacttaatttttagctcaagttcggctcatttcattcataaaccaagttcaacgagataattatcgaatcgagtttcgaactattttcg 21680683  T
Q  134 agttggttcggttcattgtcagcccta 160  Q
    || ||||||||||||||| || |||||    
T  21680682 agctggttcggttcattgccaacccta 21680656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 30 - 161
Target Start/End: Original strand, 44596527 - 44596658
Alignment:
Q  30 ctcatttagttaatgaacttaattttccgctcaagttcagttcatttggttcataaatcaagttcaacgagataattatcgaatcgagtttcgaactatt 129  Q
    |||||||| |||| ||||||||||||| | |||||||||| ||||||||||||| || ||| ||||||||| ||||| |||||||||||| | |||||||    
T  44596527 ctcatttatttaacgaacttaattttcagttcaagttcagctcatttggttcatgaaccaaattcaacgagttaattgtcgaatcgagttccaaactatt 44596626  T
Q  130 ttcgagttggttcggttcattgtcagccctac 161  Q
     ||||||||||||||||||||| |||||||||    
T  44596627 gtcgagttggttcggttcattgccagccctac 44596658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 59 - 161
Target Start/End: Original strand, 36119110 - 36119212
Alignment:
Q  59 ctcaagttcagttcatttggttcataaatcaagttcaacgagataattatcgaatcgagtttcgaactattttcgagttggttcggttcattgtcagccc 158  Q
    |||||||||||||||||||||||||||| ||||||| |||||| |||| ||||||||| ||||||||||||||  |||||||||||||||||||||||||    
T  36119110 ctcaagttcagttcatttggttcataaaccaagttcgacgagaaaattgtcgaatcgaatttcgaactattttttagttggttcggttcattgtcagccc 36119209  T
Q  159 tac 161  Q
    |||    
T  36119210 tac 36119212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 11 - 159
Target Start/End: Complemental strand, 45653580 - 45653433
Alignment:
Q  11 atatatatctcatgttcatctcatttagttaatgaacttaattttccgctcaagttcagttcatttggttcataaatcaagttcaacgagataattatcg 110  Q
    |||||||  |||||||||  |||||||| ||| |||||||| |||  |||||||||| | ||||||||||||| || |||||||||||| |||||| |||    
T  45653580 atatatagttcatgttcagttcatttagctaacgaacttaacttttagctcaagttcggctcatttggttcatgaaccaagttcaacgaaataattgtcg 45653481  T
Q  111 aatcgagtttcgaactattttcgagttggttcggttcattgtcagccct 159  Q
    |||||||||| |||||||||||||||||| |||||||||||| ||||||    
T  45653480 aatcgagttttgaactattttcgagttgg-tcggttcattgttagccct 45653433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 51 - 161
Target Start/End: Complemental strand, 12224684 - 12224574
Alignment:
Q  51 attttccgctcaagttcagttcatttggttcataaatcaagttcaacgagataattatcgaatcgagtttcgaactattttcgagttggttcggttcatt 150  Q
    |||||| |||||||||| | ||||||||||||| || ||||||||||||| ||||| ||||||||| || ||||||||| ||||||||||||||||||||    
T  12224684 attttcagctcaagttcggctcatttggttcatgaaccaagttcaacgagttaattgtcgaatcgaattccgaactattgtcgagttggttcggttcatt 12224585  T
Q  151 gtcagccctac 161  Q
    |||||||||||    
T  12224584 gtcagccctac 12224574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 30 - 160
Target Start/End: Original strand, 24575919 - 24576049
Alignment:
Q  30 ctcatttagttaatgaacttaattttccgctcaagttcagttcatttggttcataaatcaagttcaacgagataattatcgaatcgagtttcgaactatt 129  Q
    |||||||| ||||  | ||||||||||  |||||||||  |||||||||||||| || |||||||||||||  |||||||||||| | | ||||||||||    
T  24575919 ctcatttatttaacaagcttaattttcaactcaagttcgtttcatttggttcatgaaccaagttcaacgagtcaattatcgaatcaaatctcgaactatt 24576018  T
Q  130 ttcgagttggttcggttcattgtcagcccta 160  Q
    |||||||||||||||||||||||||||||||    
T  24576019 ttcgagttggttcggttcattgtcagcccta 24576049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 30 - 160
Target Start/End: Original strand, 28006360 - 28006490
Alignment:
Q  30 ctcatttagttaatgaacttaattttccgctcaagttcagttcatttggttcataaatcaagttcaacgagataattatcgaatcgagtttcgaactatt 129  Q
    |||||||| |||| || ||||||||||  |||||||||   ||||||||||||| || |||||||||||||  |||||||||||||| | ||||||||||    
T  28006360 ctcatttatttaacgagcttaattttcaactcaagttcgactcatttggttcatgaaccaagttcaacgagtcaattatcgaatcgaatctcgaactatt 28006459  T
Q  130 ttcgagttggttcggttcattgtcagcccta 160  Q
    |||||||||||||||||||||| | ||||||    
T  28006460 ttcgagttggttcggttcattgccggcccta 28006490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 24 - 161
Target Start/End: Complemental strand, 29677655 - 29677518
Alignment:
Q  24 gttcatctcatttagttaatgaacttaattttccgctcaagttcagttcatttggttcataaatcaagttcaacgagataattatcgaatcgagtttcga 123  Q
    ||||| |||||||| |||| || ||||||||||  |||||||||   ||||||||||| | || ||||||||||||   ||||||| |||||||| ||||    
T  29677655 gttcagctcatttatttaaagagcttaattttcaactcaagttcgactcatttggttcgtgaaccaagttcaacgaaccaattatcaaatcgagtatcga 29677556  T
Q  124 actattttcgagttggttcggttcattgtcagccctac 161  Q
    |||||||||||||||||||||||||||| |||||||||    
T  29677555 actattttcgagttggttcggttcattgccagccctac 29677518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 33 - 163
Target Start/End: Original strand, 30251437 - 30251568
Alignment:
Q  33 atttagttaatgaacttaattttccgctcaagttcagttcatttggttcataaatcaagttcaacgagataattatcgaatcgagtttcgaactat-ttt 131  Q
    |||||||||| ||||||||||||  ||||||||||| ||||||| |||||| || |||  |||||||| ||||||||||||| ||||| ||||||| |||    
T  30251437 atttagttaacgaacttaatttttagctcaagttcaattcatttagttcatgaaccaaactcaacgagttaattatcgaatcaagttttgaactatgttt 30251536  T
Q  132 cgagttggttcggttcattgtcagccctacat 163  Q
    ||| |||||| |||||||||||| ||||||||    
T  30251537 cgaattggtttggttcattgtcaaccctacat 30251568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 30 - 161
Target Start/End: Original strand, 31869604 - 31869735
Alignment:
Q  30 ctcatttagttaatgaacttaattttccgctcaagttcagttcatttggttcataaatcaagttcaacgagataattatcgaatcgagtttcgaactatt 129  Q
    |||||||| |||| ||||||||||||| ||| |||||| | ||||||||||||| || ||||||||||||  ||||| ||||||| |||| |||||||||    
T  31869604 ctcatttatttaacgaacttaattttcagcttaagttcggctcatttggttcatgaaccaagttcaacgatttaattgtcgaatcaagttccgaactatt 31869703  T
Q  130 ttcgagttggttcggttcattgtcagccctac 161  Q
     |||| || ||||||||||||||| |||||||    
T  31869704 gtcgaattagttcggttcattgtcggccctac 31869735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 62 - 160
Target Start/End: Original strand, 7841665 - 7841762
Alignment:
Q  62 aagttcagttcatttggttcataaatcaagttcaacgagataattatcgaatcgagtttcgaactattttcgagttggttcggttcattgtcagcccta 160  Q
    |||||| ||||||||||||||| || ||||||||||||  ||||||||||||||||| ||||| |||||||||||||||||||||||||| ||||||||    
T  7841665 aagttcggttcatttggttcatgaaccaagttcaacgaattaattatcgaatcgagtctcgaa-tattttcgagttggttcggttcattgacagcccta 7841762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 19 - 161
Target Start/End: Complemental strand, 47603003 - 47602861
Alignment:
Q  19 ctcatgttcatctcatttagttaatgaacttaattttccgctcaagttcagttcatttggttcataaatcaagttcaacgagataattatcgaatcgagt 118  Q
    |||| ||||| |||||||| |||| ||||||||||||| |||||||| ||| || || ||||||| || |||||||||||   ||| |||||| |||| |    
T  47603003 ctcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaat 47602904  T
Q  119 ttcgaactattttcgagttggttcggttcattgtcagccctac 161  Q
     |||||||||  |||||||||||||||||||||||||||||||    
T  47602903 gtcgaactataatcgagttggttcggttcattgtcagccctac 47602861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 30 - 155
Target Start/End: Original strand, 31816578 - 31816703
Alignment:
Q  30 ctcatttagttaatgaacttaattttccgctcaagttcagttcatttggttcataaatcaagttcaacgagataattatcgaatcgagtttcgaactatt 129  Q
    |||||||| || | || ||||||||||  || |||||||  ||||||||||||| || ||||||||||||   ||||| ||||| |||||||||||||||    
T  31816578 ctcatttatttgacgagcttaattttcgactgaagttcaactcatttggttcatgaaccaagttcaacgaatcaattaccgaattgagtttcgaactatt 31816677  T
Q  130 ttcgagttggttcggttcattgtcag 155  Q
    ||||||||||||||||||||||||||    
T  31816678 ttcgagttggttcggttcattgtcag 31816703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 25 - 161
Target Start/End: Complemental strand, 15257306 - 15257170
Alignment:
Q  25 ttcatctcatttagttaatgaacttaattttccgctcaagttcagttcatttggttcataaatcaagttcaacgagataattatcgaatcgagtttcgaa 124  Q
    |||| |||||||| |||| || ||||||||||  |||||||||   ||||||||||||| || ||||| ||| ||   |||||||||||||||| || ||    
T  15257306 ttcaactcatttatttaacgagcttaattttcaactcaagttcgactcatttggttcatgaaccaagtccaatgaaccaattatcgaatcgagtatcaaa 15257207  T
Q  125 ctattttcgagttggttcggttcattgtcagccctac 161  Q
    ||||||| |||||||||||||||||||||||||||||    
T  15257206 ctatttttgagttggttcggttcattgtcagccctac 15257170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 19 - 162
Target Start/End: Complemental strand, 24469958 - 24469815
Alignment:
Q  19 ctcatgttcatctcatttagttaatgaacttaattttccgctcaagttcagttcatttggttcataaatcaagttcaacgagataattatcgaatcgagt 118  Q
    |||| ||||| |||||||| |||| ||||||||||||| |||||||| ||| || || ||||||| || |||||||||||   ||| |||||| |||| |    
T  24469958 ctcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaat 24469859  T
Q  119 ttcgaactattttcgagttggttcggttcattgtcagccctaca 162  Q
     |||||||||  ||||||||||||||||||||| ||||||||||    
T  24469858 gtcgaactataatcgagttggttcggttcattgccagccctaca 24469815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 13 - 160
Target Start/End: Complemental strand, 25125032 - 25124885
Alignment:
Q  13 atatatctcatgttcatctcatttagttaatgaacttaattttccgctcaagttcagttcatttggttcataaatcaagttcaacgagataattatcgaa 112  Q
    ||||| |||| ||||| |||| |||||| | ||| ||||||||| |||||||||| | ||||||||||||| || ||||||||||||   ||||||| ||    
T  25125032 atatagctcaagttcagctcaattagttcacgaaattaattttcagctcaagttcggctcatttggttcatgaaccaagttcaacgaatcaattatcaaa 25124933  T
Q  113 tcgagtttcgaactattttcgagttggttcggttcattgtcagcccta 160  Q
    |||| || |||||| |  ||||||||||||||||||||| ||||||||    
T  25124932 tcgaattacgaactttaatcgagttggttcggttcattgccagcccta 25124885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 19 - 160
Target Start/End: Original strand, 32179857 - 32179998
Alignment:
Q  19 ctcatgttcatctcatttagttaatgaacttaattttccgctcaagttcagttcatttggttcataaatcaagttcaacgagataattatcgaatcgagt 118  Q
    |||| ||||| |||||||| |||| ||||||||||||| |||||||| ||| ||||| |||| || || |||||||||||   ||| |||||| |||| |    
T  32179857 ctcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcattaggtttatgaaccaagttcaacggattaaatatcgagtcgaat 32179956  T
Q  119 ttcgaactattttcgagttggttcggttcattgtcagcccta 160  Q
     |||||||||  ||||||||||||||||||||| ||||||||    
T  32179957 gtcgaactataatcgagttggttcggttcattgccagcccta 32179998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 44 - 161
Target Start/End: Original strand, 35810742 - 35810859
Alignment:
Q  44 gaacttaattttccgctcaagttcagttcatttggttcataaatcaagttcaacgagataattatcgaatcgagtttcgaactattttcgagttggttcg 143  Q
    ||||||||||||| |||||||||| | ||||||||||||| || ||||||||||||   |||| ||||||||| || |||||| |  |||||||||||||    
T  35810742 gaacttaattttcagctcaagttcggctcatttggttcatgaaccaagttcaacgaatcaattgtcgaatcgaattacgaactttaatcgagttggttcg 35810841  T
Q  144 gttcattgtcagccctac 161  Q
    |||||||| |||||||||    
T  35810842 gttcattgccagccctac 35810859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 19 - 160
Target Start/End: Original strand, 36419100 - 36419241
Alignment:
Q  19 ctcatgttcatctcatttagttaatgaacttaattttccgctcaagttcagttcatttggttcataaatcaagttcaacgagataattatcgaatcgagt 118  Q
    |||| ||||| |||||||| |||| ||||||||||||| |||||||| ||| ||||| ||||||| || ||||||| |||   ||| |||||| |||| |    
T  36419100 ctcaagttcagctcatttaattaacgaacttaattttcggctcaagtccagctcattaggttcatgaaccaagttcgacggattaaatatcgagtcgaat 36419199  T
Q  119 ttcgaactattttcgagttggttcggttcattgtcagcccta 160  Q
     |||||||||  ||||||||||||||||||||| ||||||||    
T  36419200 gtcgaactataatcgagttggttcggttcattgccagcccta 36419241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 30 - 150
Target Start/End: Complemental strand, 5204599 - 5204479
Alignment:
Q  30 ctcatttagttaatgaacttaattttccgctcaagttcagttcatttggttcataaatcaagttcaacgagataattatcgaatcgagtttcgaactatt 129  Q
    |||||||| |||| |||||||||||||  |||||||||   ||||||||||||  || |||||||||||||  |||||||||||||| | || |||||||    
T  5204599 ctcatttatttaacgaacttaattttcaactcaagttcgactcatttggttcacgaaccaagttcaacgagtcaattatcgaatcgaatctcaaactatt 5204500  T
Q  130 ttcgagttggttcggttcatt 150  Q
    |||||||||||||| ||||||    
T  5204499 ttcgagttggttcgattcatt 5204479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 52 - 160
Target Start/End: Original strand, 14101895 - 14102003
Alignment:
Q  52 ttttccgctcaagttcagttcatttggttcataaatcaagttcaacgagataattatcgaatcgagtttcgaactattttcgagttggttcggttcattg 151  Q
    ||||| |||||| ||||| ||||||||||||| ||  |||||||| ||||||||| ||||||||||||| |||||||| || ||||||||||| ||||||    
T  14101895 ttttcagctcaaattcagctcatttggttcatgaactaagttcaatgagataattgtcgaatcgagtttggaactattatcaagttggttcggatcattg 14101994  T
Q  152 tcagcccta 160  Q
    || ||||||    
T  14101995 tcggcccta 14102003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 24 - 160
Target Start/End: Complemental strand, 38061314 - 38061178
Alignment:
Q  24 gttcatctcatttagttaatgaacttaattttccgctcaagttcagttcatttggttcataaatcaagttcaacgagataattatcgaatcgagtttcga 123  Q
    ||||| |||||||| |||| || |||||||||   || ||||||   ||||| |||||||||||||||||||||||   ||||||| |||||| | |||     
T  38061314 gttcaactcatttatttaacgagcttaattttaaacttaagttcgactcattaggttcataaatcaagttcaacgaatcaattatcaaatcgaatctcgc 38061215  T
Q  124 actattttcgagttggttcggttcattgtcagcccta 160  Q
    |||||||||||||||||||||||||||| ||||||||    
T  38061214 actattttcgagttggttcggttcattgccagcccta 38061178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 45 - 160
Target Start/End: Complemental strand, 7016190 - 7016075
Alignment:
Q  45 aacttaattttccgctcaagttcagttcatttggttcataaatcaagttcaacgagataattatcgaatcgagtttcgaactattttcgagttggttcgg 144  Q
    |||||| ||||  |||||||||||| ||||||||||||| || |||||||||| |   |||| ||||||||||| ||||| | | |||||||||||||||    
T  7016190 aacttagttttgagctcaagttcagctcatttggttcatgaaccaagttcaacaaatcaattgtcgaatcgagtctcgaattttgttcgagttggttcgg 7016091  T
Q  145 ttcattgtcagcccta 160  Q
    ||||||||||||||||    
T  7016090 ttcattgtcagcccta 7016075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 24 - 151
Target Start/End: Original strand, 7596397 - 7596524
Alignment:
Q  24 gttcatctcatttagttaatgaacttaattttccgctcaagttcagttcatttggttcataaatcaagttcaacgagataattatcgaatcgagtttcga 123  Q
    ||||| |||| |||||||  ||||||||||||| |||||||||| | |||||||||||||||| ||||||| ||||   |||||||||||| | || |||    
T  7596397 gttcagctcaattagttagcgaacttaattttcagctcaagttcggctcatttggttcataaaccaagttcgacgaatcaattatcgaatcaaattacga 7596496  T
Q  124 actattttcgagttggttcggttcattg 151  Q
    ||| |  |||||||||||||||||||||    
T  7596497 actctaatcgagttggttcggttcattg 7596524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 25 - 160
Target Start/End: Original strand, 15014320 - 15014455
Alignment:
Q  25 ttcatctcatttagttaatgaacttaattttccgctcaagttcagttcatttggttcataaatcaagttcaacgagataattatcgaatcgagtttcgaa 124  Q
    |||| |||| ||| || |||||||||||||||  ||||||||| | ||||||||||||| |||||||||| ||||   |||||||||||||| || ||||    
T  15014320 ttcagctcaattaattgatgaacttaattttcaactcaagttcggctcatttggttcatgaatcaagttcgacgaatcaattatcgaatcgaattacgaa 15014419  T
Q  125 ctattttcgagttggttcggttcattgtcagcccta 160  Q
    || |  ||||||||||||||||||||| || |||||    
T  15014420 ctctaatcgagttggttcggttcattgccaacccta 15014455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 30 - 161
Target Start/End: Complemental strand, 39802897 - 39802766
Alignment:
Q  30 ctcatttagttaatgaacttaattttccgctcaagttcagttcatttggttcataaatcaagttcaacgagataattatcgaatcgagtttcgaactatt 129  Q
    |||||||| |||| |||||||||||||  |||||||||   ||||||||||||| || || |||||||||  ||| |  |||| ||||| ||||||||||    
T  39802897 ctcatttatttaacgaacttaattttcaactcaagttcgactcatttggttcatgaaccatgttcaacgaattaactgccgaaccgagtctcgaactatt 39802798  T
Q  130 ttcgagttggttcggttcattgtcagccctac 161  Q
    |||||||||||||| ||||||| |||||||||    
T  39802797 ttcgagttggttcgattcattgccagccctac 39802766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 11 - 153
Target Start/End: Original strand, 19508519 - 19508661
Alignment:
Q  11 atatatatctcatgttcatctcatttagttaatgaacttaattttccgctcaagttcagttcatttggttcataaatcaagttcaacgagataattatcg 110  Q
    ||||||| |||| | ||| ||||||||||||| ||||||||| ||  |||||||||| | || |||||||||| || ||||||||||||  |||||| ||    
T  19508519 atatataactcaaggtcaactcatttagttaacgaacttaatctttagctcaagttcggctcgtttggttcatgaaccaagttcaacgaactaattaccg 19508618  T
Q  111 aatcgagtttcgaactattttcgagttggttcggttcattgtc 153  Q
    | ||||||| |||||| | |||||||||  |||||||||||||    
T  19508619 agtcgagttccgaactttattcgagttgtatcggttcattgtc 19508661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 24 - 161
Target Start/End: Original strand, 7702839 - 7702976
Alignment:
Q  24 gttcatctcatttagttaatgaacttaattttccgctcaagttcagttcatttggttcataaatcaagttcaacgagataattatcgaatcgagtttcga 123  Q
    ||||| |||||||| |||| ||||||||||||| |||||||| ||| || || | ||||| || |||||||||||   ||| |||||| |||| | ||||    
T  7702839 gttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttagcttcatgaaccaagttcaacggattaaatatcgagtcgaatgtcga 7702938  T
Q  124 actattttcgagttggttcggttcattgtcagccctac 161  Q
    |||||  ||||||||||||||||||||| |||||||||    
T  7702939 actataatcgagttggttcggttcattgccagccctac 7702976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 13 - 156
Target Start/End: Original strand, 3577663 - 3577807
Alignment:
Q  13 atatatctcatgttcatctcatttagttaatgaacttaattttccgctcaagttc-agttcatttggttcataaatcaagttcaacgagataattatcga 111  Q
    ||||| |||| ||||| |||||||| |||| ||| | | ||||| |||||||||  | |||||||| ||||| || ||||||||||||| ||| | ||||    
T  3577663 atatagctcaagttcagctcatttatttaacgaattaatttttcagctcaagttttaattcatttgattcatgaaccaagttcaacgagttaactgtcga 3577762  T
Q  112 atcgagtttcgaactattttcgagttggttcggttcattgtcagc 156  Q
    |||||||| | ||||||| ||||||| ||||||||||||||||||    
T  3577763 atcgagttccaaactattgtcgagttagttcggttcattgtcagc 3577807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 24 - 151
Target Start/End: Complemental strand, 40159766 - 40159639
Alignment:
Q  24 gttcatctcatttagttaatgaacttaattttccgctcaagttcagttcatttggttcataaatcaagttcaacgagataattatcgaatcgagtttcga 123  Q
    ||||| |||||||| |||| |||||||||||||  |||||||||   ||||||| ||||| || ||||| ||| ||   |||||||||||||| | || |    
T  40159766 gttcaactcatttatttaacgaacttaattttcaactcaagttcgactcatttgattcatgaaccaagtccaatgaaccaattatcgaatcgaatatcaa 40159667  T
Q  124 actattttcgagttggttcggttcattg 151  Q
    ||||||||||||||||||||||||||||    
T  40159666 actattttcgagttggttcggttcattg 40159639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 25 - 151
Target Start/End: Original strand, 20349151 - 20349277
Alignment:
Q  25 ttcatctcatttagttaatgaacttaattttccgctcaagttcagttcatttggttcataaatcaagttcaacgagataattatcgaatcgagtttcgaa 124  Q
    |||| |||||||| |||| |||||||||||||  || |||||| | |||||||||  || |||||||||||||||  |||||||||| || | |||  ||    
T  20349151 ttcagctcatttaattaacgaacttaattttcatctgaagttcggctcatttggtatatgaatcaagttcaacgaattaattatcgagtcaaattttaaa 20349250  T
Q  125 ctattttcgagttggttcggttcattg 151  Q
    |||| ||||||||||||||||||||||    
T  20349251 ctatgttcgagttggttcggttcattg 20349277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 59 - 160
Target Start/End: Original strand, 6413278 - 6413379
Alignment:
Q  59 ctcaagttcagttcatttggttcataaatcaagttcaacgagataattatcgaatcgagtttcgaactattttcgagttggttcggttcattgtcagccc 158  Q
    |||||||||  |||||||||||||| || || |||||||||   ||||||| |||||| | |||||||||||||||||||||||| ||||||| ||||||    
T  6413278 ctcaagttcgattcatttggttcatgaaccaggttcaacgaatcaattatcaaatcgaatctcgaactattttcgagttggttcgattcattgccagccc 6413377  T
Q  159 ta 160  Q
    ||    
T  6413378 ta 6413379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 24 - 161
Target Start/End: Complemental strand, 42916250 - 42916113
Alignment:
Q  24 gttcatctcatttagttaatgaacttaattttccgctcaagttcagttcatttggttcataaatcaagttcaacgagataattatcgaatcgagtttcga 123  Q
    ||||| |||| |||||||  ||||||||||||| |||||||||| | ||||||||||||| || ||||||| ||||   |||||||||||||| || |||    
T  42916250 gttcagctcaattagttagcgaacttaattttcagctcaagttcggctcatttggttcatgaaccaagttcgacgaatcaattatcgaatcgaattacga 42916151  T
Q  124 actattttcgagttggttcggttcattgtcagccctac 161  Q
    ||  |  |||| |||||||||||||||| || ||||||    
T  42916150 acactaatcgaattggttcggttcattgccacccctac 42916113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 71 - 160
Target Start/End: Original strand, 47983306 - 47983395
Alignment:
Q  71 tcatttggttcataaatcaagttcaacgagataattatcgaatcgagtttcgaactattttcgagttggttcggttcattgtcagcccta 160  Q
    ||||||||||| | || |||||||||| |   |||||||||||||| | ||||||||||||||||||||||||||||||||||| |||||    
T  47983306 tcatttggttcgtgaaccaagttcaacaaatcaattatcgaatcgaatctcgaactattttcgagttggttcggttcattgtcaacccta 47983395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 44 - 160
Target Start/End: Complemental strand, 14578701 - 14578585
Alignment:
Q  44 gaacttaattttccgctcaagttcagttcatttggttcataaatcaagttcaacgagataattatcgaatcgagtttcgaactattttcgagttggttcg 143  Q
    ||||||||||||| |||| ||||| | ||||||||||||| || |||||||||| |   |||| || |||||| || |||||| |  |||||||||||||    
T  14578701 gaacttaattttcagctccagttcggctcatttggttcatgaaccaagttcaacaaatcaattgtctaatcgaattacgaactctaatcgagttggttcg 14578602  T
Q  144 gttcattgtcagcccta 160  Q
    |||||||||||||||||    
T  14578601 gttcattgtcagcccta 14578585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 24 - 160
Target Start/End: Complemental strand, 27076651 - 27076515
Alignment:
Q  24 gttcatctcatttagttaatgaacttaattttccgctcaagttcagttcatttggttcataaatcaagttcaacgagataattatcgaatcgagtttcga 123  Q
    ||||| ||| |||| |||| |||||||| |||  |||||||||| | |||||| ||||||  | ||||||||||||  ||||||||||||| ||| |  |    
T  27076651 gttcaactcgtttatttaacgaacttaactttgagctcaagttcggctcatttagttcatggaccaagttcaacgaattaattatcgaatcaagtcttaa 27076552  T
Q  124 actattttcgagttggttcggttcattgtcagcccta 160  Q
    ||||||||| |||||||||  ||||||||||||||||    
T  27076551 actattttcaagttggttcaattcattgtcagcccta 27076515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 30 - 160
Target Start/End: Original strand, 7995981 - 7996111
Alignment:
Q  30 ctcatttagttaatgaacttaattttccgctcaagttcagttcatttggttcataaatcaagttcaacgagataattatcgaatcgagtttcgaactatt 129  Q
    |||||||| |||| || |||||||||   || ||||||   ||||| |||| || || ||||||||||||   |||||||||||||| | ||||||||||    
T  7995981 ctcatttatttaacgagcttaattttaaacttaagttcgactcattaggtttatgaaccaagttcaacgaatcaattatcgaatcgaatctcgaactatt 7996080  T
Q  130 ttcgagttggttcggttcattgtcagcccta 160  Q
    ||| ||||||||||||||||||||| |||||    
T  7996081 ttcaagttggttcggttcattgtcaacccta 7996111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 19 - 160
Target Start/End: Original strand, 23916809 - 23916950
Alignment:
Q  19 ctcatgttcatctcatttagttaatgaacttaattttccgctcaagttcagttcatttggttcataaatcaagttcaacgagataattatcgaatcgagt 118  Q
    |||| ||||| |||| |||||| | ||||||||||||| |||||||||  | |||||||||| || || ||||||  | ||   |||||||||||||| |    
T  23916809 ctcaagttcagctcaattagttgacgaacttaattttcagctcaagttaggctcatttggttaatgaaccaagtttgatgaatcaattatcgaatcgaat 23916908  T
Q  119 ttcgaactattttcgagttggttcggttcattgtcagcccta 160  Q
    | |||||| |  ||||||||||| ||||||||||||||||||    
T  23916909 tacgaactttaatcgagttggtttggttcattgtcagcccta 23916950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 11 - 160
Target Start/End: Complemental strand, 43087615 - 43087466
Alignment:
Q  11 atatatatctcatgttcatctcatttagttaatgaacttaattttccgctcaagttcagttcatttggttcataaatcaagttcaacgagataattatcg 110  Q
    ||||||| |||| ||||| |||||||| |||| ||||||||| ||  | |||||||| | || |||||||||| || |||||||||| |  |||||| ||    
T  43087615 atatataactcaagttcaactcatttaattaacgaacttaatctttagttcaagttcggctcgtttggttcatgaaccaagttcaacaaactaattaccg 43087516  T
Q  111 aatcgagtttcgaactattttcgagttggttcggttcattgtcagcccta 160  Q
    | ||||||| |||||| | ||| |||||  || |||||||||||||||||    
T  43087515 agtcgagttccgaactttattcaagttgtatcagttcattgtcagcccta 43087466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 11 - 160
Target Start/End: Complemental strand, 46265093 - 46264944
Alignment:
Q  11 atatatatctcatgttcatctcatttagttaatgaacttaattttccgctcaagttcagttcatttggttcataaatcaagttcaacgagataattatcg 110  Q
    |||||||  ||| ||||| |||| |||||||  ||||||||||||| |||||||||| | |||||| |||||| || ||||||| ||||   ||||||||    
T  46265093 atatatagttcaagttcagctcaattagttagcgaacttaattttcagctcaagttcggctcatttagttcatgaaccaagttcgacgaatcaattatcg 46264994  T
Q  111 aatcgagtttcgaactattttcgagttggttcggttcattgtcagcccta 160  Q
    |||||| || |||||  |  |||| |||||||||||||||| || |||||    
T  46264993 aatcgaattacgaacactaatcgaattggttcggttcattgccaccccta 46264944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 25 - 151
Target Start/End: Original strand, 20347671 - 20347797
Alignment:
Q  25 ttcatctcatttagttaatgaacttaattttccgctcaagttcagttcatttggttcataaatcaagttcaacgagataattatcgaatcgagtttcgaa 124  Q
    |||| |||||||| |||| |||||||||||||  || |||||| | ||||||||| ||| |||||| ||||||||  ||||| |||| || | |||  ||    
T  20347671 ttcagctcatttaattaacgaacttaattttcatcttaagttcggctcatttggtacatgaatcaaattcaacgaattaattgtcgagtcaaattttaaa 20347770  T
Q  125 ctattttcgagttggttcggttcattg 151  Q
    |||| ||||||||| ||||||||||||    
T  20347771 ctatattcgagttgattcggttcattg 20347797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 19 - 161
Target Start/End: Original strand, 42937073 - 42937215
Alignment:
Q  19 ctcatgttcatctcatttagttaatgaacttaattttccgctcaagttcagttcatttggttcataaatcaagttcaacgagataattatcgaatcgagt 118  Q
    |||| ||||| |||| |||||| | ||||||||||||  |||||||||| | ||||||| ||||| || ||||||| ||||   |||| | ||||||| |    
T  42937073 ctcaagttcagctcaattagttgacgaacttaattttaagctcaagttcggctcatttgattcatgaaccaagttcgacgaatcaattgttgaatcgaat 42937172  T
Q  119 ttcgaactattttcgagttggttcggttcattgtcagccctac 161  Q
    | |||||| |  |||||||||||| |||||||| |||||||||    
T  42937173 tacgaactctaatcgagttggttcagttcattgccagccctac 42937215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 19 - 161
Target Start/End: Complemental strand, 48575221 - 48575079
Alignment:
Q  19 ctcatgttcatctcatttagttaatgaacttaattttccgctcaagttcagttcatttggttcataaatcaagttcaacgagataattatcgaatcgagt 118  Q
    |||| ||||| |||||||| || | ||||||||||||    ||||||||  ||| |||||||||| || ||||||||||||  |||||| ||||| ||||    
T  48575221 ctcaagttcaactcatttatttgacgaacttaattttaaattcaagttcgattcgtttggttcatgaaccaagttcaacgaattaattaccgaattgagt 48575122  T
Q  119 ttcgaactattttcgagttggttcggttcattgtcagccctac 161  Q
     ||  |||||||||||||| ||||||||| ||| | |||||||    
T  48575121 ctcatactattttcgagttagttcggttctttgccggccctac 48575079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 103 - 160
Target Start/End: Original strand, 7956407 - 7956464
Alignment:
Q  103 aattatcgaatcgagtttcgaactattttcgagttggttcggttcattgtcagcccta 160  Q
    ||||||||||| |||| |||||||||||||||||||||||||||||||| || |||||    
T  7956407 aattatcgaattgagtatcgaactattttcgagttggttcggttcattgccaacccta 7956464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 19 - 160
Target Start/End: Complemental strand, 37441327 - 37441186
Alignment:
Q  19 ctcatgttcatctcatttagttaatgaacttaattttccgctcaagttcagttcatttggttcataaatcaagttcaacgagataattatcgaatcgagt 118  Q
    |||| ||||| |||||||| |||| ||||||||||||| |||||||| ||| || || ||||||| || |||||||||||   ||  |||||| | || |    
T  37441327 ctcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattagatatcgagttgaat 37441228  T
Q  119 ttcgaactattttcgagttggttcggttcattgtcagcccta 160  Q
     |||||||||  || ||||| |||||||||||| ||||||||    
T  37441227 gtcgaactataatctagttgattcggttcattgccagcccta 37441186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 73 - 160
Target Start/End: Complemental strand, 20904036 - 20903949
Alignment:
Q  73 atttggttcataaatcaagttcaacgagataattatcgaatcgagtttcgaactattttcgagttggttcggttcattgtcagcccta 160  Q
    ||||||||||| || ||||||||||||| ||||| | |||| ||||| | ||||||| |||||||| |||||||||||  ||||||||    
T  20904036 atttggttcatgaaccaagttcaacgagttaattgttgaattgagttccaaactattgtcgagttgattcggttcatttccagcccta 20903949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 35 - 157
Target Start/End: Original strand, 15662964 - 15663086
Alignment:
Q  35 ttagttaatgaacttaattttccgctcaagttcagttcatttggttcataaatcaagttcaacgagataattatcgaatcgagtttcgaactattttcga 134  Q
    |||||| | ||||||||||||| |||||||||| | ||||||||| ||| || ||||||| ||||   |||||| |||| || || | |||| |  | ||    
T  15662964 ttagttgacgaacttaattttcagctcaagttcggctcatttggtacatgaaccaagttcgacgaatcaattattgaattgaattacaaactctaattga 15663063  T
Q  135 gttggttcggttcattgtcagcc 157  Q
    |||||||||||||||||||||||    
T  15663064 gttggttcggttcattgtcagcc 15663086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 71 - 149
Target Start/End: Complemental strand, 51432227 - 51432149
Alignment:
Q  71 tcatttggttcataaatcaagttcaacgagataattatcgaatcgagtttcgaactattttcgagttggttcggttcat 149  Q
    ||||||||||||| || || || ||||||| ||||| | |||||||| | |||| |||| |||||||||||||||||||    
T  51432227 tcatttggttcatgaaccaggtacaacgagttaattgttgaatcgagctccgaattattgtcgagttggttcggttcat 51432149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 19 - 96
Target Start/End: Complemental strand, 14770657 - 14770580
Alignment:
Q  19 ctcatgttcatctcatttagttaatgaacttaattttccgctcaagttcagttcatttggttcataaatcaagttcaa 96  Q
    |||| ||||| |||| |||||| | ||||||||||||  | |||||||| | |||||||||||||||| |||||||||    
T  14770657 ctcaagttcagctcaattagttcacgaacttaatttttagatcaagttcggctcatttggttcataaaccaagttcaa 14770580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 83
Target Start/End: Complemental strand, 8828367 - 8828303
Alignment:
Q  19 ctcatgttcatctcatttagttaatgaacttaattttccgctcaagttcagttcatttggttcat 83  Q
    |||| ||||| || ||||||||||   ||||||||||| ||||||||||| ||||||||||||||    
T  8828367 ctcaagttcaacttatttagttaacagacttaattttcagctcaagttcaattcatttggttcat 8828303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 91 - 159
Target Start/End: Original strand, 9381756 - 9381824
Alignment:
Q  91 gttcaacgagataattatcgaatcgagtttcgaactattttcgagttggttcggttcattgtcagccct 159  Q
    |||||||||  |||||| ||| |||  | ||||| ||||||||||||||||||||||||||||| ||||    
T  9381756 gttcaacgaactaattaccgattcggatctcgaaatattttcgagttggttcggttcattgtcaaccct 9381824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 11 - 163
Target Start/End: Complemental strand, 13645329 - 13645177
Alignment:
Q  11 atatatatctcatgttcatctcatttagttaatgaacttaattttccgctcaagttcagttcatttggttcataaatcaagttcaacgagataattatcg 110  Q
    ||||||| ||||  |||| |||||||| |||| ||||||||| ||  |||||||||| | || |||| ||||| || |||||| || ||  |||||| ||    
T  13645329 atatataactcaaattcaactcatttacttaacgaacttaatctttagctcaagttcggctcgtttgattcatgaaccaagttaaatgaactaattaccg 13645230  T
Q  111 aatcgagtttcgaactattttcgagttggttcggttcattgtcagccctacat 163  Q
    | ||||||| | |||| | ||| |||||  | ||||||||| |||||||||||    
T  13645229 agtcgagttccaaactttattcaagttgtcttggttcattggcagccctacat 13645177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 24 - 156
Target Start/End: Original strand, 14796592 - 14796724
Alignment:
Q  24 gttcatctcatttagttaatgaacttaattttccgctcaagttcagttcatttggttcataaatcaagttcaacgagataattatcgaatcgagtttcga 123  Q
    ||||| |||||||| |||| |||||||||||   | |||||||||  | | ||||||||| || || |||||||||  |||||||||| || |||| |||    
T  14796592 gttcaactcatttatttaacgaacttaatttaaagttcaagttcaacttaattggttcatgaaccacgttcaacgaattaattatcgagtcaagttccga 14796691  T
Q  124 actattttcgagttggttcggttcattgtcagc 156  Q
    ||| |  ||||||| | |||||| |||||||||    
T  14796692 actttgatcgagttagctcggtttattgtcagc 14796724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 24 - 156
Target Start/End: Original strand, 14805466 - 14805598
Alignment:
Q  24 gttcatctcatttagttaatgaacttaattttccgctcaagttcagttcatttggttcataaatcaagttcaacgagataattatcgaatcgagtttcga 123  Q
    ||||| |||||||| |||| |||||||||||   | |||||||||  | | ||||||||| || || |||||||||  |||||||||| || |||| |||    
T  14805466 gttcaactcatttatttaacgaacttaatttaaagttcaagttcaacttaattggttcatgaaccacgttcaacgaattaattatcgagtcaagttccga 14805565  T
Q  124 actattttcgagttggttcggttcattgtcagc 156  Q
    ||| |  ||||||| | |||||| |||||||||    
T  14805566 actttgatcgagttagctcggtttattgtcagc 14805598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 63 - 128
Target Start/End: Original strand, 14725354 - 14725419
Alignment:
Q  63 agttcagttcatttggttcataaatcaagttcaacgagataattatcgaatcgagtttcgaactat 128  Q
    |||||| |||||||| ||||| || ||||||||||||||||||| | ||||| ||||  |||||||    
T  14725354 agttcaattcatttgattcatgaaccaagttcaacgagataattgttgaatcaagttcggaactat 14725419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 96; Significance: 4e-47; HSPs: 33)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 25 - 160
Target Start/End: Complemental strand, 3409323 - 3409188
Alignment:
Q  25 ttcatctcatttagttaatgaacttaattttccgctcaagttcagttcatttggttcataaatcaagttcaacgagataattatcgaatcgagtttcgaa 124  Q
    |||| |||||||| |||| ||||||||||||| |||||||||||||||||||||||||| || ||||||||||||| ||||| |||||||||||||||||    
T  3409323 ttcagctcatttatttaacgaacttaattttcagctcaagttcagttcatttggttcatgaaccaagttcaacgagttaattgtcgaatcgagtttcgaa 3409224  T
Q  125 ctattttcgagttggttcggttcattgtcagcccta 160  Q
    ||||| ||||||||||||||||||||| ||||||||    
T  3409223 ctattgtcgagttggttcggttcattgccagcccta 3409188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 24 - 156
Target Start/End: Complemental strand, 24844802 - 24844670
Alignment:
Q  24 gttcatctcatttagttaatgaacttaattttccgctcaagttcagttcatttggttcataaatcaagttcaacgagataattatcgaatcgagtttcga 123  Q
    ||||| |||||||| |||  ||| ||||||||| |||||||||||| ||||||||||||| || |||||||||||||||||||  |||||||||||||||    
T  24844802 gttcagctcatttatttatcgaatttaattttcagctcaagttcagctcatttggttcatgaaccaagttcaacgagataattgccgaatcgagtttcga 24844703  T
Q  124 actattttcgagttggttcggttcattgtcagc 156  Q
    |||||| |||||||||||||| |||||||||||    
T  24844702 actattatcgagttggttcggatcattgtcagc 24844670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 34 - 150
Target Start/End: Original strand, 17616281 - 17616397
Alignment:
Q  34 tttagttaatgaacttaattttccgctcaagttcagttcatttggttcataaatcaagttcaacgagataattatcgaatcgagtttcgaactattttcg 133  Q
    ||||||||||||||||||||||  |||||||||| | |||||||||||||  ||||| ||||||||||||||| |||||||||||||| |||||||||||    
T  17616281 tttagttaatgaacttaatttttagctcaagttcggctcatttggttcatgtatcaaattcaacgagataattgtcgaatcgagtttctaactattttcg 17616380  T
Q  134 agttggttcggttcatt 150  Q
    |||||||||| ||||||    
T  17616381 agttggttcgattcatt 17616397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 19 - 157
Target Start/End: Complemental strand, 44740624 - 44740486
Alignment:
Q  19 ctcatgttcatctcatttagttaatgaacttaattttccgctcaagttcagttcatttggttcataaatcaagttcaacgagataattatcgaatcgagt 118  Q
    |||| ||||| |||||||  |||| ||||||||||||  |||||||||||| || |||||||||| || ||||||||||||| ||||| |||||||||||    
T  44740624 ctcaagttcagctcatttgtttaacgaacttaatttttagctcaagttcagctcgtttggttcatgaaccaagttcaacgagttaattgtcgaatcgagt 44740525  T
Q  119 ttcgaactattttcgagttggttcggttcattgtcagcc 157  Q
      | ||||||| ||||||||||||||||||||| |||||    
T  44740524 cccaaactattgtcgagttggttcggttcattgccagcc 44740486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 22 - 160
Target Start/End: Original strand, 41959145 - 41959283
Alignment:
Q  22 atgttcatctcatttagttaatgaacttaattttccgctcaagttcagttcatttggttcataaatcaagttcaacgagataattatcgaatcgagtttc 121  Q
    ||||||| |||||||| |||| ||||||||||||| |||||||| ||| || || ||||||| ||||||||||||||   ||  |||||| |||| | ||    
T  41959145 atgttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaatcaagttcaacggattagatatcgagtcgaatgtc 41959244  T
Q  122 gaactattttcgagttggttcggttcattgtcagcccta 160  Q
    |||||||  |||||||| |||||||||||||||||||||    
T  41959245 gaactataatcgagttgattcggttcattgtcagcccta 41959283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 44 - 160
Target Start/End: Complemental strand, 27464688 - 27464572
Alignment:
Q  44 gaacttaattttccgctcaagttcagttcatttggttcataaatcaagttcaacgagataattatcgaatcgagtttcgaactattttcgagttggttcg 143  Q
    |||||||||||||   ||||||||   ||||||||||||| || ||| |||||| |   |||||||||||| ||| ||||||||||||||||||||||||    
T  27464688 gaacttaattttcaattcaagttcgactcatttggttcatgaaccaaattcaacaaatcaattatcgaatcaagtctcgaactattttcgagttggttcg 27464589  T
Q  144 gttcattgtcagcccta 160  Q
    |||||||||||||||||    
T  27464588 gttcattgtcagcccta 27464572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 71 - 163
Target Start/End: Original strand, 29806957 - 29807049
Alignment:
Q  71 tcatttggttcataaatcaagttcaacgagataattatcgaatcgagtttcgaactattttcgagttggttcggttcattgtcagccctacat 163  Q
    ||||||||||| |||| ||||||||||||   |||||||||||||||| | ||||||||||||| |||||||||||||||| |||||||||||    
T  29806957 tcatttggttcgtaaaccaagttcaacgaatcaattatcgaatcgagtcttgaactattttcgaattggttcggttcattgccagccctacat 29807049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 24 - 160
Target Start/End: Original strand, 40458925 - 40459061
Alignment:
Q  24 gttcatctcatttagttaatgaacttaattttccgctcaagttcagttcatttggttcataaatcaagttcaacgagataattatcgaatcgagtttcga 123  Q
    ||||| |||||||| |||| || ||||||||||  |||||||||   ||||||||||| | || |||||||||| |   |||||| ||||||||| || |    
T  40458925 gttcagctcatttatttaacgagcttaattttcaactcaagttcgactcatttggttcgtgaaccaagttcaacaaaccaattattgaatcgagtatcaa 40459024  T
Q  124 actattttcgagttggttcggttcattgtcagcccta 160  Q
    ||||||||| |||||||||||||||||||||||||||    
T  40459025 actattttcaagttggttcggttcattgtcagcccta 40459061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 19 - 151
Target Start/End: Original strand, 41332230 - 41332362
Alignment:
Q  19 ctcatgttcatctcatttagttaatgaacttaattttccgctcaagttcagttcatttggttcataaatcaagttcaacgagataattatcgaatcgagt 118  Q
    |||||||||  | |||||| ||||  |||||||||||| |||||| ||||  ||| |||||| || || |||||||||| || ||||| |||||||||||    
T  41332230 ctcatgttcggcccatttatttaacaaacttaattttcagctcaaattcaactcaattggtttatgaaccaagttcaacaagttaattgtcgaatcgagt 41332329  T
Q  119 ttcgaactattttcgagttggttcggttcattg 151  Q
    |||||||||| |||||||||||| |||||||||    
T  41332330 ttcgaactatattcgagttggtttggttcattg 41332362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 24 - 157
Target Start/End: Complemental strand, 11007108 - 11006977
Alignment:
Q  24 gttcatctcatttagttaatgaacttaattttccgctcaagttcagttcatttggttcataaatcaagttcaacgagataattatcgaatcgagtttcga 123  Q
    ||||| |||||||| |||| || ||||||||||  |||||||||   ||||||||||| | || ||||||||||||   |||||||| |||||||  | |    
T  11007108 gttcaactcatttatttaacgagcttaattttcaactcaagttcgactcatttggttcgtgaaccaagttcaacgaatcaattatcggatcgagt--caa 11007011  T
Q  124 actattttcgagttggttcggttcattgtcagcc 157  Q
    ||||||||||||||||||||||||||||||||||    
T  11007010 actattttcgagttggttcggttcattgtcagcc 11006977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 19 - 160
Target Start/End: Original strand, 27634670 - 27634811
Alignment:
Q  19 ctcatgttcatctcatttagttaatgaacttaattttccgctcaagttcagttcatttggttcataaatcaagttcaacgagataattatcgaatcgagt 118  Q
    |||| ||||| |||||||| |||| ||||||||||||| |||||||| ||| || || ||||||| ||  ||||||||||   ||| |||||| |||| |    
T  27634670 ctcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaactaagttcaacggattaaatatcgagtcgaat 27634769  T
Q  119 ttcgaactattttcgagttggttcggttcattgtcagcccta 160  Q
     |||||||||  ||||||||||||||||||||| ||||||||    
T  27634770 gtcgaactataatcgagttggttcggttcattgccagcccta 27634811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 13 - 159
Target Start/End: Original strand, 30713149 - 30713295
Alignment:
Q  13 atatatctcatgttcatctcatttagttaatgaacttaattttccgctcaagttcagttcatttggttcataaatcaagttcaacgagataattatcgaa 112  Q
    ||||| |||| ||||| |||| |||||| | |||||||| |||| ||||| |||| | ||||||||||||| || ||||||| ||||   ||||||||||    
T  30713149 atatagctcaagttcaactcaattagttgacgaacttaaatttcagctcatgttcggctcatttggttcatgaaccaagttcgacgaatcaattatcgaa 30713248  T
Q  113 tcgagtttcgaactattttcgagttggttcggttcattgtcagccct 159  Q
    |||| || |||||  |  ||||||||||||||||||||| |||||||    
T  30713249 tcgaattacgaacactaatcgagttggttcggttcattgccagccct 30713295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 48 - 161
Target Start/End: Complemental strand, 27902551 - 27902438
Alignment:
Q  48 ttaattttccgctcaagttcagttcatttggttcataaatcaagttcaacgagataattatcgaatcgagtttcgaactattttcgagttggttcggttc 147  Q
    ||||||||| |||||||||| |||||||| |||||| || ||||||| ||||   |||| ||||||||| || |||||| |  |||||||||||||||||    
T  27902551 ttaattttcagctcaagttcggttcattttgttcatgaaccaagttcgacgaatcaattgtcgaatcgatttacgaactttaatcgagttggttcggttc 27902452  T
Q  148 attgtcagccctac 161  Q
    | ||||||||||||    
T  27902451 aatgtcagccctac 27902438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 19 - 160
Target Start/End: Original strand, 33831494 - 33831635
Alignment:
Q  19 ctcatgttcatctcatttagttaatgaacttaattttccgctcaagttcagttcatttggttcataaatcaagttcaacgagataattatcgaatcgagt 118  Q
    |||| ||||| |||||||| |||| ||||||||||||| |||||||| ||| || || ||||||| || ||| |||||||   ||  |||||| |||| |    
T  33831494 ctcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaaattcaacggattagatatcgagtcgaat 33831593  T
Q  119 ttcgaactattttcgagttggttcggttcattgtcagcccta 160  Q
     |||||||||  ||||||||||||||||||||| ||||||||    
T  33831594 gtcgaactataatcgagttggttcggttcattgccagcccta 33831635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 11 - 151
Target Start/End: Complemental strand, 2647123 - 2646983
Alignment:
Q  11 atatatatctcatgttcatctcatttagttaatgaacttaattttccgctcaagttcagttcatttggttcataaatcaagttcaacgagataattatcg 110  Q
    ||||||| |||| ||||| || |||||||||| ||||||||||||  |||||||||| | || |||||||||| || ||||||||||||  |||||| ||    
T  2647123 atatataactcaagttcaacttatttagttaacgaacttaatttttagctcaagttcggctcgtttggttcatgaaccaagttcaacgaactaattaccg 2647024  T
Q  111 aatcgagtttcgaactattttcgagttggttcggttcattg 151  Q
    | |||||||  ||||| | || ||||||  |||||||||||    
T  2647023 agtcgagttctgaactttatttgagttgtatcggttcattg 2646983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 13 - 160
Target Start/End: Original strand, 11027901 - 11028048
Alignment:
Q  13 atatatctcatgttcatctcatttagttaatgaacttaattttccgctcaagttcagttcatttggttcataaatcaagttcaacgagataattatcgaa 112  Q
    ||||| |||| ||||| |||| |||||| | ||||||||||||  | |||||||| | ||||||||||||| || ||||||| ||||   ||||||||||    
T  11027901 atatagctcaagttcagctcaattagttgacgaacttaatttttagttcaagttcggctcatttggttcatgaaccaagttcgacgaatcaattatcgaa 11028000  T
Q  113 tcgagtttcgaactattttcgagttggttcggttcattgtcagcccta 160  Q
    | || || |||||| |  | ||||||||||||||||||| ||||||||    
T  11028001 ttgaattacgaactctaattgagttggttcggttcattgccagcccta 11028048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 30 - 160
Target Start/End: Original strand, 36538666 - 36538796
Alignment:
Q  30 ctcatttagttaatgaacttaattttccgctcaagttcagttcatttggttcataaatcaagttcaacgagataattatcgaatcgagtttcgaactatt 129  Q
    |||||||| |||| ||||||||||||| |||||||| ||  || || ||||||| || |||||||||||   ||  |||||| |||| | |||||||||     
T  36538666 ctcatttaattaacgaacttaattttcagctcaagtccaactcgttaggttcatgaaccaagttcaacggattagatatcgagtcgaatgtcgaactata 36538765  T
Q  130 ttcgagttggttcggttcattgtcagcccta 160  Q
     ||||||||||| ||||||||||||||||||    
T  36538766 atcgagttggtttggttcattgtcagcccta 36538796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 30 - 119
Target Start/End: Original strand, 2578089 - 2578178
Alignment:
Q  30 ctcatttagttaatgaacttaattttccgctcaagttcagttcatttggttcataaatcaagttcaacgagataattatcgaatcgagtt 119  Q
    |||||||| |||| ||| ||||||||| |||||||||||| ||||||| ||||| ||||||||||||| || ||||| ||| ||||||||    
T  2578089 ctcatttatttaacgaatttaattttcagctcaagttcagctcatttgattcatgaatcaagttcaacaagttaattgtcgcatcgagtt 2578178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 24 - 156
Target Start/End: Complemental strand, 17369125 - 17368994
Alignment:
Q  24 gttcatctcatttagttaatgaacttaattttccgctcaagttcagttcatttggttcataaatcaagttcaacgagataattatcgaatcgagtttcga 123  Q
    ||||| |||||||| ||||  || |||||||||  |||||||||   ||||| ||||||||||  || ||||||||| ||||| |||| | ||||| |||    
T  17369125 gttcaactcatttacttaacaaatttaattttcaactcaagttcgactcatt-ggttcataaactaaattcaacgagttaattgtcgagttgagttccga 17369027  T
Q  124 actattttcgagttggttcggttcattgtcagc 156  Q
    ||||| |||||||||| ||||||||||||||||    
T  17369026 actatattcgagttggctcggttcattgtcagc 17368994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 30 - 154
Target Start/End: Complemental strand, 45383268 - 45383144
Alignment:
Q  30 ctcatttagttaatgaacttaattttccgctcaagttcagttcatttggttcataaatcaagttcaacgagataattatcgaatcgagtttcgaactatt 129  Q
    |||||||| |||||||| ||||||||  |||||| || ||  |||||||||||| ||||||||||| ||||  |||| | |||||||  |||||||||      
T  45383268 ctcatttaattaatgaaattaattttaagctcaaatttagcgcatttggttcatgaatcaagttcatcgagtcaattgttgaatcgaacttcgaactaaa 45383169  T
Q  130 ttcgagttggttcggttcattgtca 154  Q
    ||| |||| ||||||||||||||||    
T  45383168 ttcaagttagttcggttcattgtca 45383144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 19 - 161
Target Start/End: Original strand, 9963758 - 9963900
Alignment:
Q  19 ctcatgttcatctcatttagttaatgaacttaattttccgctcaagttcagttcatttggttcataaatcaagttcaacgagataattatcgaatcgagt 118  Q
    |||| ||||| ||||||||  ||| ||||||||||||   || |||||||| ||||||||||||| || | ||||||||||| ||||| ||||||  |||    
T  9963758 ctcaagttcagctcatttatctaacgaacttaatttttaacttaagttcagctcatttggttcatgaacccagttcaacgagttaattgtcgaattaagt 9963857  T
Q  119 ttcgaactattttcgagttggttcggttcattgtcagccctac 161  Q
    |||||| |||| | || |||  |||||||||||  ||||||||    
T  9963858 ttcgaattattattgaattgactcggttcattgctagccctac 9963900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 92 - 161
Target Start/End: Original strand, 28968892 - 28968961
Alignment:
Q  92 ttcaacgagataattatcgaatcgagtttcgaactattttcgagttggttcggttcattgtcagccctac 161  Q
    ||||||||| ||||||||||||||||| || ||||||| ||| |||| || |||||||||||||||||||    
T  28968892 ttcaacgagttaattatcgaatcgagtctcaaactattctcgggttgatttggttcattgtcagccctac 28968961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 19 - 151
Target Start/End: Original strand, 26436353 - 26436484
Alignment:
Q  19 ctcatgttcatctcatttagttaatgaacttaattttccgctcaagttcagttcatttggttcataaatcaagttcaacgagataattatcgaatcgagt 118  Q
    |||| ||||| |||||||| |||| ||||||||||||| ||||| |||||| || || ||||||| || |||||||||||   ||| |||||| |||| |    
T  26436353 ctcaagttcagctcatttaattaacgaacttaattttcagctcacgttcagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaat 26436452  T
Q  119 ttcgaactattttcgagttggttcggttcattg 151  Q
     || || |||  |||||||||||||||||||||    
T  26436453 gtc-aattataatcgagttggttcggttcattg 26436484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 30 - 150
Target Start/End: Complemental strand, 33164110 - 33163990
Alignment:
Q  30 ctcatttagttaatgaacttaattttccgctcaagttcagttcatttggttcataaatcaagttcaacgagataattatcgaatcgagtttcgaactatt 129  Q
    |||||||| |||| ||||||||||||| |||||||| ||| || || ||||||| || |||||||||||   ||  |||||| |||| | |||||||||     
T  33164110 ctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattagatatcgagtcgaatgtcgaactata 33164011  T
Q  130 ttcgagttggttcggttcatt 150  Q
     |||| |||||||||||||||    
T  33164010 atcgaattggttcggttcatt 33163990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 65 - 160
Target Start/End: Original strand, 40680255 - 40680349
Alignment:
Q  65 ttcagttcatttggttcataaatcaagttcaacgagataattatcgaatcgagtttcgaactattttcgagttggttcggttcattgtcagcccta 160  Q
    ||||| ||||||| ||||||| | || |||||||||  |||||||||||||| || ||||||||| | ||||||||||||||||||| ||| ||||    
T  40680255 ttcagctcatttgattcataactaaa-ttcaacgagtcaattatcgaatcgaattccgaactattattgagttggttcggttcattgccagtccta 40680349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 24 - 160
Target Start/End: Original strand, 13829882 - 13830018
Alignment:
Q  24 gttcatctcatttagttaatgaacttaattttccgctcaagttcagttcatttggttcataaatcaagttcaacgagataattatcgaatcgagtttcga 123  Q
    ||||| |||||||| |||| ||  ||||||||   ||||||||||  |||||||||| || || ||||||||||||   |||||||||||||| | || |    
T  13829882 gttcaactcatttaattaacgagtttaatttttaactcaagttcaactcatttggtttatgaaccaagttcaacgaatcaattatcgaatcgattatcaa 13829981  T
Q  124 actattttcgagttggttcggttcattgtcagcccta 160  Q
      |||||| ||||| |||||| ||| |||||||||||    
T  13829982 gttatttttgagtttgttcggctcaatgtcagcccta 13830018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 29 - 160
Target Start/End: Original strand, 16544015 - 16544146
Alignment:
Q  29 tctcatttagttaatgaacttaattttccgctcaagttcagttcatttggttcataaatcaagttcaacgagata-attatcgaatcgagtttcgaacta 127  Q
    ||||||||| |||| ||||||||||||   ||||| ||||  | ||||||||  | || |||||||||| | ||| ||||||||||||||| | |||||     
T  16544015 tctcatttatttaacgaacttaatttttaactcaaattcaaattatttggttggtgaaccaagttcaacaa-atacattatcgaatcgagtcttgaactt 16544113  T
Q  128 ttttcgagttggttcggttcattgtcagcccta 160  Q
    ||| ||||||| |||||||||||||||| ||||    
T  16544114 tttccgagttgcttcggttcattgtcagtccta 16544146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 102 - 157
Target Start/End: Original strand, 10412522 - 10412577
Alignment:
Q  102 taattatcgaatcgagtttcgaactattttcgagttggttcggttcattgtcagcc 157  Q
    |||||| |||||||| | |||||||||||||||||||||| |||||||| ||||||    
T  10412522 taattaccgaatcgaatctcgaactattttcgagttggtttggttcattatcagcc 10412577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 19 - 148
Target Start/End: Original strand, 34064704 - 34064833
Alignment:
Q  19 ctcatgttcatctcatttagttaatgaacttaattttccgctcaagttcagttcatttggttcataaatcaagttcaacgagataattatcgaatcgagt 118  Q
    |||| ||||| |||||||| |||| ||||||||||||| |||||||| ||| || || ||||||| ||  ||||||||||   ||  ||| || |||| |    
T  34064704 ctcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaactaagttcaacggattagatattgagtcgaat 34064803  T
Q  119 ttcgaactattttcgagttggttcggttca 148  Q
     |||||||||  | ||||||||||||||||    
T  34064804 gtcgaactataattgagttggttcggttca 34064833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 60 - 131
Target Start/End: Original strand, 31000880 - 31000951
Alignment:
Q  60 tcaagttcagttcatttggttcataaatcaagttcaacgagataattatcgaatcgagtttcgaactatttt 131  Q
    |||||||||  ||||||||||||| ||||||||||| |||  |||||| |||||||| | || |||||||||    
T  31000880 tcaagttcaaatcatttggttcatgaatcaagttcatcgaattaattaccgaatcgaatctcaaactatttt 31000951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 13 - 160
Target Start/End: Complemental strand, 34116320 - 34116173
Alignment:
Q  13 atatatctcatgttcatctcatttagttaatgaacttaattttccgctcaagttcagttcatttggttcataaatcaagttcaacgagataattatcgaa 112  Q
    ||||| |||| ||||| |||| ||| |||  ||||||||||||  |||||||||| | ||||||||||||| ||  |||||| || |   ||||||  ||    
T  34116320 atatagctcaagttcagctcaattatttagcgaacttaattttaagctcaagttcggctcatttggttcatgaactaagttcgacaaatcaattattaaa 34116221  T
Q  113 tcgagtttcgaactattttcgagttggttcggttcattgtcagcccta 160  Q
    |||| || |||||| |  |||||||||||||| |||||| || |||||    
T  34116220 tcgaattacgaactctaatcgagttggttcggctcattgccaccccta 34116173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 71 - 161
Target Start/End: Complemental strand, 20203803 - 20203713
Alignment:
Q  71 tcatttggttcataaatcaagttcaacgagataattatcgaatcgagtttcgaactattttcgagttggttcggttcattgtcagccctac 161  Q
    ||||||||||||| || ||||||||||||   |||| | ||||||| || |||||| |  |||||||||||||||| ||||  ||||||||    
T  20203803 tcatttggttcatgaaccaagttcaacgaatcaattgttgaatcgaattacgaactttaatcgagttggttcggttaattgctagccctac 20203713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 24 - 116
Target Start/End: Complemental strand, 38409707 - 38409615
Alignment:
Q  24 gttcatctcatttagttaatgaacttaattttccgctcaagttcagttcatttggttcataaatcaagttcaacgagataattatcgaatcga 116  Q
    ||||| |||| |||||| |  |||||||||||| |||||||||| | ||||||||||||| || ||| ||| ||||   |||| |||||||||    
T  38409707 gttcagctcaattagttcacaaacttaattttcagctcaagttcggctcatttggttcatgaaccaaattcgacgaatcaattgtcgaatcga 38409615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 95; Significance: 2e-46; HSPs: 55)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 25 - 163
Target Start/End: Original strand, 33124705 - 33124843
Alignment:
Q  25 ttcatctcatttagttaatgaacttaattttccgctcaagttcagttcatttggttcataaatcaagttcaacgagataattatcgaatcgagtttcgaa 124  Q
    |||| |||||||| |||| ||||||||||||| ||||||||||| ||||||||||||||||| ||||||||||||| ||||| |||||||||||||| ||    
T  33124705 ttcagctcatttatttaacgaacttaattttcagctcaagttcaattcatttggttcataaaccaagttcaacgagttaattgtcgaatcgagtttcaaa 33124804  T
Q  125 ctattttcgagttggttcggttcattgtcagccctacat 163  Q
    ||||| ||||||||||||||||||||| |||||||||||    
T  33124805 ctattgtcgagttggttcggttcattgccagccctacat 33124843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 30 - 160
Target Start/End: Complemental strand, 33171664 - 33171534
Alignment:
Q  30 ctcatttagttaatgaacttaattttccgctcaagttcagttcatttggttcataaatcaagttcaacgagataattatcgaatcgagtttcgaactatt 129  Q
    |||||||| |||||||||||||||||  |||||||||||| ||||||||||||||||||||||||||| |||||||| ||  ||||||||||||||||||    
T  33171664 ctcatttatttaatgaacttaatttttagctcaagttcagctcatttggttcataaatcaagttcaacaagataattgtcttatcgagtttcgaactatt 33171565  T
Q  130 ttcgagttggttcggttcattgtcagcccta 160  Q
     |||||||||||||| |||||| ||||||||    
T  33171564 atcgagttggttcggatcattgccagcccta 33171534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 19 - 160
Target Start/End: Original strand, 33935512 - 33935653
Alignment:
Q  19 ctcatgttcatctcatttagttaatgaacttaattttccgctcaagttcagttcatttggttcataaatcaagttcaacgagataattatcgaatcgagt 118  Q
    |||| |||||||||||||  |||| ||||||||||||| |||||||||||| || |||||||||| || ||||||||||||| |||||||||||||||||    
T  33935512 ctcaagttcatctcatttgtttaacgaacttaattttcagctcaagttcagctcgtttggttcatgaaccaagttcaacgagttaattatcgaatcgagt 33935611  T
Q  119 ttcgaactattttcgagttggttcggttcattgtcagcccta 160  Q
      | ||||||| ||||||||||||| ||||||| ||||||||    
T  33935612 cccaaactattgtcgagttggttcgattcattgccagcccta 33935653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 30 - 160
Target Start/End: Complemental strand, 23227129 - 23226999
Alignment:
Q  30 ctcatttagttaatgaacttaattttccgctcaagttcagttcatttggttcataaatcaagttcaacgagataattatcgaatcgagtttcgaactatt 129  Q
    |||||||| |||| ||||||||||||| |||||||||||| ||||||| |||||  | |||||||||| |||||||| ||||||||||||||||||||||    
T  23227129 ctcatttatttaacgaacttaattttcagctcaagttcagctcatttgattcatgtaccaagttcaacaagataattgtcgaatcgagtttcgaactatt 23227030  T
Q  130 ttcgagttggttcggttcattgtcagcccta 160  Q
     |||||||||||||| |||||  ||||||||    
T  23227029 gtcgagttggttcggatcattaccagcccta 23226999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 30 - 160
Target Start/End: Complemental strand, 23236282 - 23236152
Alignment:
Q  30 ctcatttagttaatgaacttaattttccgctcaagttcagttcatttggttcataaatcaagttcaacgagataattatcgaatcgagtttcgaactatt 129  Q
    |||||||| |||| ||||||||||||| |||||||||||| ||||||| |||||  | |||||||||| |||||||| ||||||||||||||||||||||    
T  23236282 ctcatttatttaacgaacttaattttcagctcaagttcagctcatttgattcatgtaccaagttcaacaagataattgtcgaatcgagtttcgaactatt 23236183  T
Q  130 ttcgagttggttcggttcattgtcagcccta 160  Q
     |||||||||||||| |||||  ||||||||    
T  23236182 gtcgagttggttcggatcattaccagcccta 23236152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 24 - 160
Target Start/End: Original strand, 22075072 - 22075208
Alignment:
Q  24 gttcatctcatttagttaatgaacttaattttccgctcaagttcagttcatttggttcataaatcaagttcaacgagataattatcgaatcgagtttcga 123  Q
    ||||| |||||||| |||| ||||||||||||| |||||||||||| ||||||||||| | || || |||||||||| ||||| ||||||||||||   |    
T  22075072 gttcagctcatttatttaacgaacttaattttcagctcaagttcagctcatttggttcgtgaaccacgttcaacgagttaattgtcgaatcgagttctaa 22075171  T
Q  124 actattttcgagttggttcggttcattgtcagcccta 160  Q
    |||||| ||||||||||||||||||||| ||||||||    
T  22075172 actattatcgagttggttcggttcattgccagcccta 22075208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 19 - 149
Target Start/End: Original strand, 10618925 - 10619055
Alignment:
Q  19 ctcatgttcatctcatttagttaatgaacttaattttccgctcaagttcagttcatttggttcataaatcaagttcaacgagataattatcgaatcgagt 118  Q
    |||| ||||| |||||||| |||| ||||||||||||| |||||||||||| |||||| |||||| || ||||||||||||| ||||| |||||||||||    
T  10618925 ctcaagttcagctcatttatttaacgaacttaattttcagctcaagttcagctcatttagttcatgaaccaagttcaacgagttaattgtcgaatcgagt 10619024  T
Q  119 ttcgaactattttcgagttggttcggttcat 149  Q
    | | ||||||| |||||||| ||||||||||    
T  10619025 tccaaactattgtcgagttgattcggttcat 10619055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 65 - 159
Target Start/End: Original strand, 41449790 - 41449884
Alignment:
Q  65 ttcagttcatttggttcataaatcaagttcaacgagataattatcgaatcgagtttcgaactattttcgagttggttcggttcattgtcagccct 159  Q
    ||||| |||||||| |||| || ||||||||||||||||||| |||||||||||||||||||||| |||||||||||||| ||||||||||||||    
T  41449790 ttcagctcatttggatcatgaaccaagttcaacgagataattgtcgaatcgagtttcgaactattgtcgagttggttcggatcattgtcagccct 41449884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 19 - 160
Target Start/End: Complemental strand, 44422043 - 44421901
Alignment:
Q  19 ctcatgttcatctcatttagttaatgaacttaa-ttttccgctcaagttcagttcatttggttcataaatcaagttcaacgagataattatcgaatcgag 117  Q
    |||| ||||| |||||||  |||| |||||||| ||||| |||||||||||| || |||||||||| || ||||||||||||| ||||| ||||||||||    
T  44422043 ctcaagttcagctcatttgtttaacgaacttaaattttcagctcaagttcagctcgtttggttcatgaaccaagttcaacgagttaattgtcgaatcgag 44421944  T
Q  118 tttcgaactattttcgagttggttcggttcattgtcagcccta 160  Q
    |  | ||||||| ||||||||||||||||||||| ||||||||    
T  44421943 tcccaaactattgtcgagttggttcggttcattgacagcccta 44421901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 24 - 160
Target Start/End: Original strand, 7447885 - 7448021
Alignment:
Q  24 gttcatctcatttagttaatgaacttaattttccgctcaagttcagttcatttggttcataaatcaagttcaacgagataattatcgaatcgagtttcga 123  Q
    ||||| |||||||| |||| ||||||||||||| |||||||||| | ||||||||||||| || ||||||||| ||   |||| |||| |||| ||  ||    
T  7447885 gttcaactcatttaattaacgaacttaattttcagctcaagttcggctcatttggttcatgaaccaagttcaatgaaccaattgtcgagtcgaattatga 7447984  T
Q  124 actattttcgagttggttcggttcattgtcagcccta 160  Q
    ||||| |||||||||||||||||||||||||||||||    
T  7447985 actatattcgagttggttcggttcattgtcagcccta 7448021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 24 - 160
Target Start/End: Original strand, 26719824 - 26719960
Alignment:
Q  24 gttcatctcatttagttaatgaacttaattttccgctcaagttcagttcatttggttcataaatcaagttcaacgagataattatcgaatcgagtttcga 123  Q
    ||||| |||||||| |||| |||||||||||||  |||||||||   ||||||||||||| || ||||| ||| ||   |||||||||||||||| ||||    
T  26719824 gttcaactcatttatttaacgaacttaattttcaactcaagttcgactcatttggttcatgaaccaagtccaatgaaccaattatcgaatcgagtatcga 26719923  T
Q  124 actattttcgagttggttcggttcattgtcagcccta 160  Q
    |||||||||||||||||||| ||||||||||| ||||    
T  26719924 actattttcgagttggttcgattcattgtcagtccta 26719960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 24 - 160
Target Start/End: Original strand, 32356970 - 32357106
Alignment:
Q  24 gttcatctcatttagttaatgaacttaattttccgctcaagttcagttcatttggttcataaatcaagttcaacgagataattatcgaatcgagtttcga 123  Q
    ||||| ||| |||| |||| |||||| ||||||  ||||| ||| | |||||| |||||| |||||||||||||||  ||||||||||||||||| ||||    
T  32356970 gttcaactcgtttacttaacgaactttattttcaactcaaattcggctcatttagttcatgaatcaagttcaacgaattaattatcgaatcgagtctcga 32357069  T
Q  124 actattttcgagttggttcggttcattgtcagcccta 160  Q
    ||||||||  |||||||| ||||||||||||||||||    
T  32357070 actatttttaagttggtttggttcattgtcagcccta 32357106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 24 - 160
Target Start/End: Complemental strand, 33899080 - 33898944
Alignment:
Q  24 gttcatctcatttagttaatgaacttaattttccgctcaagttcagttcatttggttcataaatcaagttcaacgagataattatcgaatcgagtttcga 123  Q
    ||||| |||||||| |||| || ||||||||||  |||||||||   ||||||||||||| || ||||| ||| ||  ||||| ||||||||| | ||||    
T  33899080 gttcaactcatttatttaacgagcttaattttcaactcaagttcgactcatttggttcatgaaccaagtccaatgaactaattctcgaatcgaatatcga 33898981  T
Q  124 actattttcgagttggttcggttcattgtcagcccta 160  Q
    |||||||||||||||||||||||||||||||||||||    
T  33898980 actattttcgagttggttcggttcattgtcagcccta 33898944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 24 - 159
Target Start/End: Complemental strand, 18250129 - 18249994
Alignment:
Q  24 gttcatctcatttagttaatgaacttaattttccgctcaagttcagttcatttggttcataaatcaagttcaacgagataattatcgaatcgagtttcga 123  Q
    ||||| |||||||| |||| || | ||||||||  |||||||||   ||||||||||||| || ||||||||||||   |||||||||||||||| | ||    
T  18250129 gttcaactcatttatttaacgagcataattttcaactcaagttcgactcatttggttcatgaaccaagttcaacgaatcaattatcgaatcgagtcttga 18250030  T
Q  124 actattttcgagttggttcggttcattgtcagccct 159  Q
    |||||||||||||||||||||||||||| |||||||    
T  18250029 actattttcgagttggttcggttcattgccagccct 18249994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 30 - 160
Target Start/End: Complemental strand, 17025491 - 17025361
Alignment:
Q  30 ctcatttagttaatgaacttaattttccgctcaagttcagttcatttggttcataaatcaagttcaacgagataattatcgaatcgagtttcgaactatt 129  Q
    |||||||| |||| || ||||||||||  |||||||||   ||||||||||| | || |||||||||||||  ||||||||||||||   | ||||||||    
T  17025491 ctcatttatttaacgagcttaattttcaactcaagttcgactcatttggttcgtgaaccaagttcaacgagtcaattatcgaatcgaaccttgaactatt 17025392  T
Q  130 ttcgagttggttcggttcattgtcagcccta 160  Q
    |||||||||||||||||||||||||||||||    
T  17025391 ttcgagttggttcggttcattgtcagcccta 17025361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 11 - 160
Target Start/End: Complemental strand, 11595945 - 11595796
Alignment:
Q  11 atatatatctcatgttcatctcatttagttaatgaacttaattttccgctcaagttcagttcatttggttcataaatcaagttcaacgagataattatcg 110  Q
    ||||||| |||| | ||| ||||||||||||| ||||||||| ||  |||||||||| | || |||||||||| || ||||||||||||  |||||| ||    
T  11595945 atatataactcaaggtcaactcatttagttaacgaacttaatctttagctcaagttcggctcgtttggttcatgaaccaagttcaacgaactaattaccg 11595846  T
Q  111 aatcgagtttcgaactattttcgagttggttcggttcattgtcagcccta 160  Q
    | ||||||| |||||| | |||||||||  ||||||||||||||||||||    
T  11595845 agtcgagttccgaactttattcgagttgtatcggttcattgtcagcccta 11595796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 19 - 160
Target Start/End: Complemental strand, 21760724 - 21760583
Alignment:
Q  19 ctcatgttcatctcatttagttaatgaacttaattttccgctcaagttcagttcatttggttcataaatcaagttcaacgagataattatcgaatcgagt 118  Q
    |||| ||||| |||||||| |||| ||  ||| |||||  |||||||||   ||||||||||| | ||  |||||||||||   ||||||||||||||||    
T  21760724 ctcaagttcaactcatttatttaacgagtttagttttcaactcaagttcgactcatttggttcgtgaacaaagttcaacgaatcaattatcgaatcgagt 21760625  T
Q  119 ttcgaactattttcgagttggttcggttcattgtcagcccta 160  Q
    |||||||||||||||||||||||||||||||| |||||||||    
T  21760624 ttcgaactattttcgagttggttcggttcattatcagcccta 21760583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 19 - 160
Target Start/End: Original strand, 37334282 - 37334423
Alignment:
Q  19 ctcatgttcatctcatttagttaatgaacttaattttccgctcaagttcagttcatttggttcataaatcaagttcaacgagataattatcgaatcgagt 118  Q
    |||| ||||| |||||||| |||| ||||||||||||| |||||||| ||| || || ||||||| || |||||||||||   ||| ||||||||||| |    
T  37334282 ctcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgaatcgaat 37334381  T
Q  119 ttcgaactattttcgagttggttcggttcattgtcagcccta 160  Q
     |||||||||  |||||||||||||||||||||||| |||||    
T  37334382 gtcgaactataatcgagttggttcggttcattgtcaacccta 37334423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 24 - 160
Target Start/End: Original strand, 36472448 - 36472584
Alignment:
Q  24 gttcatctcatttagttaatgaacttaattttccgctcaagttcagttcatttggttcataaatcaagttcaacgagataattatcgaatcgagtttcga 123  Q
    ||||| || ||||| |||| || ||||||||||  ||||||||| | ||||||||||||| || ||||||||||||   | |||||||||||||| || |    
T  36472448 gttcaacttatttatttaacgagcttaattttcaactcaagttcggctcatttggttcatgaaccaagttcaacgaatcatttatcgaatcgagtatcaa 36472547  T
Q  124 actattttcgagttggttcggttcattgtcagcccta 160  Q
      |||||||||||||||||||||||||||||||||||    
T  36472548 gttattttcgagttggttcggttcattgtcagcccta 36472584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 19 - 162
Target Start/End: Original strand, 20401000 - 20401143
Alignment:
Q  19 ctcatgttcatctcatttagttaatgaacttaattttccgctcaagttcagttcatttggttcataaatcaagttcaacgagataattatcgaatcgagt 118  Q
    |||| ||||| |||||||| |||| ||||||||| ||  |||||||||||||||| | ||||||| || ||| ||||| |   |||||| ||| |||| |    
T  20401000 ctcaagttcagctcatttaattaaagaacttaatatttagctcaagttcagttcagtaggttcatgaaccaaattcaatggactaattaccgagtcgaat 20401099  T
Q  119 ttcgaactattttcgagttggttcggttcattgtcagccctaca 162  Q
    |||||||||| ||||||||||||||||||||||||| |||||||    
T  20401100 ttcgaactatattcgagttggttcggttcattgtcaaccctaca 20401143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 30 - 160
Target Start/End: Complemental strand, 46573742 - 46573612
Alignment:
Q  30 ctcatttagttaatgaacttaattttccgctcaagttcagttcatttggttcataaatcaagttcaacgagataattatcgaatcgagtttcgaactatt 129  Q
    |||||||| |||| || ||||||||||  || ||||||   ||||||||||||| || |||||||||||||  |||||||||||||| | ||||| ||||    
T  46573742 ctcatttatttaacgagcttaattttcaacttaagttcgactcatttggttcatgaaccaagttcaacgagtcaattatcgaatcgaatctcgaattatt 46573643  T
Q  130 ttcgagttggttcggttcattgtcagcccta 160  Q
    || ||||||||||||||||||| ||||||||    
T  46573642 tttgagttggttcggttcattgccagcccta 46573612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 30 - 160
Target Start/End: Complemental strand, 49034354 - 49034224
Alignment:
Q  30 ctcatttagttaatgaacttaattttccgctcaagttcagttcatttggttcataaatcaagttcaacgagataattatcgaatcgagtttcgaactatt 129  Q
    |||||||| || | || ||||||||||  |||||||||   ||||||||||||| || |||||||||||| | ||||| |||||||| ||||||||||||    
T  49034354 ctcatttatttgacgagcttaattttcaactcaagttcgactcatttggttcatgaaccaagttcaacgaaacaattaccgaatcgaatttcgaactatt 49034255  T
Q  130 ttcgagttggttcggttcattgtcagcccta 160  Q
    |||||||||| ||||||| ||| ||||||||    
T  49034254 ttcgagttggatcggttcgttgccagcccta 49034224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 19 - 160
Target Start/End: Complemental strand, 222367 - 222226
Alignment:
Q  19 ctcatgttcatctcatttagttaatgaacttaattttccgctcaagttcagttcatttggttcataaatcaagttcaacgagataattatcgaatcgagt 118  Q
    |||| ||||| |||||||  |||| ||| ||||||||| | |||||||||| || |||||||||| || ||| ||||||||| ||||| ||||||| |||    
T  222367 ctcaagttcagctcatttgtttaacgaatttaattttcagttcaagttcagctcgtttggttcatgaaccaaattcaacgagttaattgtcgaatcaagt 222268  T
Q  119 ttcgaactattttcgagttggttcggttcattgtcagcccta 160  Q
      | ||||||| ||||||||||||||||||||| ||||||||    
T  222267 cccaaactattgtcgagttggttcggttcattgccagcccta 222226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 11 - 151
Target Start/End: Original strand, 45055724 - 45055864
Alignment:
Q  11 atatatatctcatgttcatctcatttagttaatgaacttaattttccgctcaagttcagttcatttggttcataaatcaagttcaacgagataattatcg 110  Q
    ||||||| |||| ||||| ||||||||||||| ||||||||| ||  |||||||||| | || |||||||||| || ||||||||||||  |||||| ||    
T  45055724 atatataactcaagttcaactcatttagttaacgaacttaatctttagctcaagttcggctcgtttggttcatgaaccaagttcaacgaactaattaccg 45055823  T
Q  111 aatcgagtttcgaactattttcgagttggttcggttcattg 151  Q
    | ||||||| |||||| | |||||||||  |||||||||||    
T  45055824 agtcgagttccgaactttattcgagttgtatcggttcattg 45055864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 30 - 154
Target Start/End: Original strand, 48634462 - 48634586
Alignment:
Q  30 ctcatttagttaatgaacttaattttccgctcaagttcagttcatttggttcataaatcaagttcaacgagataattatcgaatcgagtttcgaactatt 129  Q
    |||||||| |||| ||||||||||||  |||||||||||  ||||||||||||| || ||||||||||||| ||||   |||||||||||  ||||||||    
T  48634462 ctcatttatttaacgaacttaatttttagctcaagttcaactcatttggttcatgaaccaagttcaacgagttaatctacgaatcgagttctgaactatt 48634561  T
Q  130 ttcgagttggttcggttcattgtca 154  Q
     |||||||| || ||||||||||||    
T  48634562 gtcgagttgatttggttcattgtca 48634586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 30 - 161
Target Start/End: Complemental strand, 18740348 - 18740217
Alignment:
Q  30 ctcatttagttaatgaacttaattttccgctcaagttcagttcatttggttcataaatcaagttcaacgagataattatcgaatcgagtttcgaactatt 129  Q
    |||||||| |||| || ||||||||||  |||||||||   ||||||||||||| || |||||| || |||  ||||||| |||||| | ||||||||||    
T  18740348 ctcatttatttaacgagcttaattttcaactcaagttcgactcatttggttcatgaaccaagtttaatgagtcaattatcaaatcgaatctcgaactatt 18740249  T
Q  130 ttcgagttggttcggttcattgtcagccctac 161  Q
    |||||||||||||||||||||| | |||||||    
T  18740248 ttcgagttggttcggttcattgccggccctac 18740217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 47 - 161
Target Start/End: Complemental strand, 35543669 - 35543555
Alignment:
Q  47 cttaattttccgctcaagttcagttcatttggttcataaatcaagttcaacgagataattatcgaatcgagtttcgaactattttcgagttggttcggtt 146  Q
    ||||||||||  |||||||||   |||||| |||||| || ||||||||||||   ||||||||||| |||| || ||||||||||||||||||||| ||    
T  35543669 cttaattttcaactcaagttcgactcatttagttcatgaaccaagttcaacgaatcaattatcgaatggagtctcaaactattttcgagttggttcgatt 35543570  T
Q  147 cattgtcagccctac 161  Q
    |||||||||||||||    
T  35543569 cattgtcagccctac 35543555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 19 - 161
Target Start/End: Original strand, 42072087 - 42072229
Alignment:
Q  19 ctcatgttcatctcatttagttaatgaacttaattttccgctcaagttcagttcatttggttcataaatcaagttcaacgagataattatcgaatcgagt 118  Q
    |||| ||||| |||||||| |||| ||||||||||||| |||||||| ||| || || ||||||| ||||||||||||||   ||  ||||||||||| |    
T  42072087 ctcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaatcaagttcaacggattagatatcgaatcgaat 42072186  T
Q  119 ttcgaactattttcgagttggttcggttcattgtcagccctac 161  Q
     || ||||||  |||||||| |||||| |||||||||||||||    
T  42072187 gtcaaactataatcgagttgtttcggtacattgtcagccctac 42072229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 19 - 161
Target Start/End: Original strand, 45176249 - 45176391
Alignment:
Q  19 ctcatgttcatctcatttagttaatgaacttaattttccgctcaagttcagttcatttggttcataaatcaagttcaacgagataattatcgaatcgagt 118  Q
    |||| ||||| |||||||| |||| ||||||||||||| ||| |||||||| || |||||||||| || |||||||||||   |||||||||| |||| |    
T  45176249 ctcaagttcaactcatttaattaacgaacttaattttcagctaaagttcagctcgtttggttcatgaaccaagttcaacggattaattatcgagtcgaat 45176348  T
Q  119 ttcgaactattttcgagttggttcggttcattgtcagccctac 161  Q
     || ||||||  ||||||| |||||||||||||| || |||||    
T  45176349 gtcaaactataatcgagtttgttcggttcattgttagtcctac 45176391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 19 - 160
Target Start/End: Complemental strand, 5776271 - 5776130
Alignment:
Q  19 ctcatgttcatctcatttagttaatgaacttaattttccgctcaagttcagttcatttggttcataaatcaagttcaacgagataattatcgaatcgagt 118  Q
    |||| ||||| |||||||| |||| ||||||||||||| |||||||| ||| || || ||||||| || |||||||||||   ||| |||||| |||| |    
T  5776271 ctcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaat 5776172  T
Q  119 ttcgaactattttcgagttggttcggttcattgtcagcccta 160  Q
     |||||||||  ||||||||||||||||||||| || |||||    
T  5776171 gtcgaactataatcgagttggttcggttcattgccaacccta 5776130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 19 - 160
Target Start/End: Original strand, 43052876 - 43053017
Alignment:
Q  19 ctcatgttcatctcatttagttaatgaacttaattttccgctcaagttcagttcatttggttcataaatcaagttcaacgagataattatcgaatcgagt 118  Q
    |||| ||||| ||||| || |||| ||||||||||||| |||||||| ||| ||||| ||||||| || |||||||||||   ||| |||||| |||| |    
T  43052876 ctcaagttcagctcatctaattaacgaacttaattttcggctcaagtccagctcattaggttcatgaaccaagttcaacggattaaatatcgagtcgaat 43052975  T
Q  119 ttcgaactattttcgagttggttcggttcattgtcagcccta 160  Q
     |||||||||  ||||||||||||||||||||| || |||||    
T  43052976 gtcgaactataatcgagttggttcggttcattgccaacccta 43053017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 13 - 161
Target Start/End: Original strand, 3942174 - 3942322
Alignment:
Q  13 atatatctcatgttcatctcatttagttaatgaacttaattttccgctcaagttcagttcatttggttcataaatcaagttcaacgagataattatcgaa 112  Q
    ||||| |||| ||||| |||| ||| || | ||||||||||||| ||||||||   ||||||||||||||| || ||||||||| ||   || | |||||    
T  3942174 atatagctcaagttcagctcaattaattcacgaacttaattttcagctcaagtctggttcatttggttcatgaaccaagttcaatgaatcaactgtcgaa 3942273  T
Q  113 tcgagtttcgaactattttcgagttggttcggttcattgtcagccctac 161  Q
    |||| || |||||| |  |||||||||||||||||||||||||||||||    
T  3942274 tcgaattacgaactttaatcgagttggttcggttcattgtcagccctac 3942322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 19 - 161
Target Start/End: Complemental strand, 5795077 - 5794935
Alignment:
Q  19 ctcatgttcatctcatttagttaatgaacttaattttccgctcaagttcagttcatttggttcataaatcaagttcaacgagataattatcgaatcgagt 118  Q
    |||| ||||| |||||||| |||| ||||||||||||| |||||||| ||| || || ||||||| || |||||||||||   ||  |||||| |||| |    
T  5795077 ctcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattagatatcgagtcgaat 5794978  T
Q  119 ttcgaactattttcgagttggttcggttcattgtcagccctac 161  Q
     |||||||||  ||| ||||||||||||||||| |||||||||    
T  5794977 gtcgaactataatcgggttggttcggttcattgccagccctac 5794935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 88 - 157
Target Start/End: Original strand, 33019374 - 33019443
Alignment:
Q  88 caagttcaacgagataattatcgaatcgagtttcgaactattttcgagttggttcggttcattgtcagcc 157  Q
    ||||||||||||   |||||||||||||||| |||||||||||| |||||||||||||||||||||||||    
T  33019374 caagttcaacgaaccaattatcgaatcgagtatcgaactatttttgagttggttcggttcattgtcagcc 33019443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 25 - 161
Target Start/End: Complemental strand, 665982 - 665846
Alignment:
Q  25 ttcatctcatttagttaatgaacttaattttccgctcaagttcagttcatttggttcataaatcaagttcaacgagataattatcgaatcgagtttcgaa 124  Q
    |||| |||||||| |||| ||||||||||||| |||||||| ||| || || ||||||| || ||| || ||||   ||| |||||| |||| | |||||    
T  665982 ttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaaatttaacggattaaatatcgagtcgaatgtcgaa 665883  T
Q  125 ctattttcgagttggttcggttcattgtcagccctac 161  Q
    ||||  ||||||||||||||||||||| |||||||||    
T  665882 ctataatcgagttggttcggttcattgccagccctac 665846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 25 - 160
Target Start/End: Complemental strand, 37401701 - 37401566
Alignment:
Q  25 ttcatctcatttagttaatgaacttaattttccgctcaagttcagttcatttggttcataaatcaagttcaacgagataattatcgaatcgagtttcgaa 124  Q
    |||| |||| |||||| | |||||||||||||  ||||||||  | ||||||||||||| ||||||||||||| |   |||| ||||||||| || ||||    
T  37401701 ttcagctcaattagttgacgaacttaattttcaactcaagtttggctcatttggttcatgaatcaagttcaacaaatcaattttcgaatcgaattacgaa 37401602  T
Q  125 ctattttcgagttggttcggttcattgtcagcccta 160  Q
    || |  |||| |||||| ||||||||||||||||||    
T  37401601 ctctaatcgaattggtttggttcattgtcagcccta 37401566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 11 - 160
Target Start/End: Complemental strand, 40480200 - 40480050
Alignment:
Q  11 atatatatctcatgttcatctcatttagttaatgaacttaattttccgctcaagttcagttcattt-ggttcataaatcaagttcaacgagataattatc 109  Q
    ||||||| |||| ||||| ||||||||||||| ||||||||| ||  |||||||||| | || ||| ||||||| || ||||||||||||  |||||| |    
T  40480200 atatataactcaagttcaactcatttagttaacgaacttaatctttagctcaagttcggctcgttttggttcatgaaccaagttcaacgaactaattacc 40480101  T
Q  110 gaatcgagtttcgaactattttcgagttggttcggttcattgtcagcccta 160  Q
    || ||||||| |||||| | |||||||||  || |||||||  ||||||||    
T  40480100 gactcgagttccgaactttattcgagttgtatcagttcattaccagcccta 40480050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 71 - 156
Target Start/End: Original strand, 31491871 - 31491956
Alignment:
Q  71 tcatttggttcataaatcaagttcaacgagataattatcgaatcgagtttcgaactattttcgagttggttcggttcattgtcagc 156  Q
    |||||||||||||   |||||||||||||  ||||||||||||||| | || ||||||||| |||||| |||||||||||||||||    
T  31491871 tcatttggttcatgtgtcaagttcaacgaattaattatcgaatcgaatctcaaactatttttgagttgattcggttcattgtcagc 31491956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 24 - 160
Target Start/End: Original strand, 10096480 - 10096616
Alignment:
Q  24 gttcatctcatttagttaatgaacttaattttccgctcaagttcagttcatttggttcataaatcaagttcaacgagataattatcgaatcgagtttcga 123  Q
    ||||| ||||||||||||  |||||||||||  || |||||||||  ||||||||||||| || ||||||| | ||   |||| |||| |||||||||||    
T  10096480 gttcagctcatttagttagcgaacttaatttctcgttcaagttcaactcatttggttcatgaaccaagttcgatgaacaaattgtcgagtcgagtttcga 10096579  T
Q  124 actattttcgagttggttcggttcattgtcagcccta 160  Q
    ||||| ||||| |||  || |||||||| ||||||||    
T  10096580 actatgttcgaattgcctcagttcattgccagcccta 10096616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 19 - 159
Target Start/End: Original strand, 36927003 - 36927143
Alignment:
Q  19 ctcatgttcatctcatttagttaatgaacttaattttccgctcaagttcagttcatttggttcataaatcaagttcaacgagataattatcgaatcgagt 118  Q
    |||| ||||| |||||||| |||| ||||||||||||  |||||||| ||  || || ||||||| || |||||||||||   ||  |||||| |||| |    
T  36927003 ctcaagttcaactcatttaattaacgaacttaatttttagctcaagtccaactcgttaggttcatgaaccaagttcaacggattagatatcgagtcgaat 36927102  T
Q  119 ttcgaactattttcgagttggttcggttcattgtcagccct 159  Q
     |||||||||  ||||||||||||||||||||| |||||||    
T  36927103 gtcgaactataatcgagttggttcggttcattgccagccct 36927143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 58 - 157
Target Start/End: Complemental strand, 33140904 - 33140805
Alignment:
Q  58 gctcaagttcagttcatttggttcataaatcaagttcaacgagataattatcgaatcgagtttcgaactattttcgagttggttcggttcattgtcagcc 157  Q
    |||||||||||||||||||  ||||| || ||||||||||||| ||||| || | |||| || |||||||| |||||||||  |||||||||| ||||||    
T  33140904 gctcaagttcagttcatttcattcatgaaccaagttcaacgagttaattgtcaagtcgaattccgaactatgttcgagttgactcggttcattatcagcc 33140805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 24 - 160
Target Start/End: Original strand, 17608721 - 17608854
Alignment:
Q  24 gttcatctcatttagttaatgaacttaattttccgctcaagttcagttcatttggttcataaatcaagttcaacgagataattatcgaatcgagtttcga 123  Q
    ||||| |||| |||||| | ||||||||||||| | |||||||| | ||||||||||||| || ||||||| ||||   ||||   ||||||| || |||    
T  17608721 gttcaactcaattagttgacgaacttaattttcagatcaagttcggctcatttggttcatcaaccaagttcgacgaatcaatt---gaatcgaattacga 17608817  T
Q  124 actattttcgagttggttcggttcattgtcagcccta 160  Q
    ||| || |||||||| |||||||||||||| ||||||    
T  17608818 acttttatcgagttgattcggttcattgtcggcccta 17608854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 35 - 161
Target Start/End: Complemental strand, 27231664 - 27231538
Alignment:
Q  35 ttagttaatgaacttaattttccgctcaagttcagttcatttggttcataaatcaagttcaacgagataattatcgaatcgagtttcgaactattttcga 134  Q
    |||||| | ||||||||||||| | |||||||| | ||||||| | ||| |||||||||| ||||   |||||||||||||| || |||||| |  |  |    
T  27231664 ttagttgacgaacttaattttcagttcaagttcggctcatttgatacatgaatcaagttcgacgaatcaattatcgaatcgaattacgaactctaattaa 27231565  T
Q  135 gttggttcggttcattgtcagccctac 161  Q
    | |||||||||||||||||||||||||    
T  27231564 gctggttcggttcattgtcagccctac 27231538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 19 - 156
Target Start/End: Complemental strand, 3930857 - 3930720
Alignment:
Q  19 ctcatgttcatctcatttagttaatgaacttaattttccgctcaagttcagttcatttggttcataaatcaagttcaacgagataattatcgaatcgagt 118  Q
    |||| ||||| |||||||| |||| ||||||||||||| |||||||| ||| || || |||||||  | |||||||||||   ||  |||||| |||| |    
T  3930857 ctcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatggaccaagttcaacggattagatatcgagtcgaat 3930758  T
Q  119 ttcgaactattttcgagttggttcggttcattgtcagc 156  Q
     |||||||||  |||||||| |||||||||||| ||||    
T  3930757 gtcgaactataatcgagttgtttcggttcattgccagc 3930720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 71 - 164
Target Start/End: Complemental strand, 24128589 - 24128496
Alignment:
Q  71 tcatttggttcataaatcaagttcaacgagataattatcgaatcgagtttcgaactattttcgagttggttcggttcattgtcagccctacata 164  Q
    ||||||||||||| || ||| ||||||||| ||||||||||||| |||| |||| ||| |||||||  ||||||||||||| || || ||||||    
T  24128589 tcatttggttcatgaaccaaattcaacgagttaattatcgaatcaagttccgaaatatgttcgagtgtgttcggttcattgccaaccttacata 24128496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 19 - 160
Target Start/End: Complemental strand, 28949899 - 28949758
Alignment:
Q  19 ctcatgttcatctcatttagttaatgaacttaattttccgctcaagttcagttcatttggttcataaatcaagttcaacgagataattatcgaatcgagt 118  Q
    |||| ||||| |||||||| |||| ||||||||||||  |||||| | ||| || || ||||||| || |||||||||||   ||  |||||| |||| |    
T  28949899 ctcaagttcagctcatttaattaacgaacttaatttttagctcaattccagctcgttaggttcatgaaccaagttcaacggattagatatcgagtcgaat 28949800  T
Q  119 ttcgaactattttcgagttggttcggttcattgtcagcccta 160  Q
     |||||||||  |||||||| |||||||||||| ||||||||    
T  28949799 gtcgaactataatcgagttgattcggttcattgccagcccta 28949758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 19 - 160
Target Start/End: Complemental strand, 48505929 - 48505795
Alignment:
Q  19 ctcatgttcatctcatttagttaatgaacttaattttccgctcaagttcagttcatttggttcataaatcaagttcaacgagataattatcgaatcgagt 118  Q
    |||| ||||| |||||||| |||| ||||||||||||| |||||||| ||| ||||| ||||||| || ||||||||||| ||| |  ||   || |||     
T  48505929 ctcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcattaggttcatgaaccaagttcaacg-gatta-gat---attgag- 48505836  T
Q  119 ttcgaactattttcgagttggttcggttcattgtcagcccta 160  Q
     |||||||||  ||||||||||||||||||||||||||||||    
T  48505835 -tcgaactataatcgagttggttcggttcattgtcagcccta 48505795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 35 - 160
Target Start/End: Original strand, 37106846 - 37106971
Alignment:
Q  35 ttagttaatgaacttaattttccgctcaagttcagttcatttggttcataaatcaagttcaacgagataattatcgaatcgagtttcgaactattttcga 134  Q
    |||||| | ||||||||||||  |||||||||| | ||||||||| ||| ||  |||||| ||||  ||||||||||||||| || |||||| |  | ||    
T  37106846 ttagttgacgaacttaatttttagctcaagttcggctcatttggtacattaactaagttcgacgaattaattatcgaatcgaattacgaactctaattga 37106945  T
Q  135 gttggttcggttcattgtcagcccta 160  Q
    || |||||||||||||| || |||||    
T  37106946 gtcggttcggttcattgccaacccta 37106971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 89 - 161
Target Start/End: Complemental strand, 6866752 - 6866680
Alignment:
Q  89 aagttcaacgagataattatcgaatcgagtttcgaactattttcgagttggttcggttcattgtcagccctac 161  Q
    |||||||| ||  ||||||  ||||||||| || ||||||||||||||| |||| ||||||||||||||||||    
T  6866752 aagttcaatgaattaattactgaatcgagtctcaaactattttcgagtttgttcagttcattgtcagccctac 6866680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 19 - 98
Target Start/End: Original strand, 26216276 - 26216355
Alignment:
Q  19 ctcatgttcatctcatttagttaatgaacttaattttccgctcaagttcagttcatttggttcataaatcaagttcaacg 98  Q
    |||| ||||| ||| |||| |||| ||||||||||||| |||||||| ||| || || |||||||||| |||||||||||    
T  26216276 ctcaagttcagctcctttaattaacgaacttaattttcagctcaagtccagctcgttaggttcataaaccaagttcaacg 26216355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 25 - 146
Target Start/End: Complemental strand, 29037915 - 29037794
Alignment:
Q  25 ttcatctcatttagttaatgaacttaattttccgctcaagttcagttcatttggttcataaatcaagttcaacgagataattatcgaatcgagtttcgaa 124  Q
    |||| |||||||  |||| | |||||||||||  |||||||||   ||||||||||||| ||  ||||||| | |  |||||| |||||||||| || ||    
T  29037915 ttcaactcatttgtttaacggacttaattttcaactcaagttcgtctcatttggttcatgaacaaagttcagcaaattaattaccgaatcgagtctcaaa 29037816  T
Q  125 ctattttcgagttggttcggtt 146  Q
    ||||||||||| |||| |||||    
T  29037815 ctattttcgagctggtacggtt 29037794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 33 - 111
Target Start/End: Complemental strand, 49001113 - 49001035
Alignment:
Q  33 atttagttaatgaacttaattttccgctcaagttcagttcatttggttcataaatcaagttcaacgagataattatcga 111  Q
    |||||||||| ||||||||||||| | ||||||||| || |||| |||||||||  |||||  | ||| ||||||||||    
T  49001113 atttagttaacgaacttaattttcagttcaagttcaatttattttgttcataaactaagtttgatgagttaattatcga 49001035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 58 - 151
Target Start/End: Original strand, 388989 - 389082
Alignment:
Q  58 gctcaagttcagttcatttggttcataaatcaagttcaacgagataattatcgaatcgagtttcgaactattttcgagttggttcggttcattg 151  Q
    |||||||||||| || || ||||||| || |||||||||||   ||| |||||| | || | |||||||||  |||||||| ||||||||||||    
T  388989 gctcaagttcagctcgttaggttcatgaaccaagttcaacggattaaatatcgagttgaatgtcgaactataatcgagttgattcggttcattg 389082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 19 - 83
Target Start/End: Original strand, 15434247 - 15434311
Alignment:
Q  19 ctcatgttcatctcatttagttaatgaacttaattttccgctcaagttcagttcatttggttcat 83  Q
    |||| ||||| |||||||| |||| ||||||||||||| |||||||| ||| || || |||||||    
T  15434247 ctcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcat 15434311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 102 - 146
Target Start/End: Complemental strand, 46652691 - 46652647
Alignment:
Q  102 taattatcgaatcgagtttcgaactattttcgagttggttcggtt 146  Q
    ||||||||||||||| ||||||||||| ||||| ||||| |||||    
T  46652691 taattatcgaatcgaatttcgaactatattcgaattggtccggtt 46652647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 95; Significance: 2e-46; HSPs: 64)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 30 - 160
Target Start/End: Complemental strand, 11055356 - 11055226
Alignment:
Q  30 ctcatttagttaatgaacttaattttccgctcaagttcagttcatttggttcataaatcaagttcaacgagataattatcgaatcgagtttcgaactatt 129  Q
    |||||||| |||| |||||||||||||||||||||||||| ||||||||||||| || ||||||||| ||| |||||||||||||||||| |||||||||    
T  11055356 ctcatttatttaacgaacttaattttccgctcaagttcagctcatttggttcatgaaccaagttcaatgagttaattatcgaatcgagttccgaactatt 11055257  T
Q  130 ttcgagttggttcggttcattgtcagcccta 160  Q
     ||||||||||||||||||||||||||||||    
T  11055256 gtcgagttggttcggttcattgtcagcccta 11055226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 30 - 160
Target Start/End: Original strand, 26632946 - 26633076
Alignment:
Q  30 ctcatttagttaatgaacttaattttccgctcaagttcagttcatttggttcataaatcaagttcaacgagataattatcgaatcgagtttcgaactatt 129  Q
    |||||||| |||| ||||||||||||| |||||||||||| |||||||||| || |  ||||||||||||| ||||| |||||||||||| |||||||||    
T  26632946 ctcatttatttaacgaacttaattttcagctcaagttcagctcatttggttaatgagccaagttcaacgagttaattgtcgaatcgagttacgaactatt 26633045  T
Q  130 ttcgagttggttcggttcattgtcagcccta 160  Q
     ||||||||||||||||||||| | ||||||    
T  26633046 atcgagttggttcggttcattgccggcccta 26633076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 24 - 160
Target Start/End: Original strand, 22184507 - 22184643
Alignment:
Q  24 gttcatctcatttagttaatgaacttaattttccgctcaagttcagttcatttggttcataaatcaagttcaacgagataattatcgaatcgagtttcga 123  Q
    ||||| |||||||  |||| ||||||||||||| |||||||||||| || |||||||||| || ||||||||||||| ||||| |||||||||||  | |    
T  22184507 gttcagctcatttgtttaacgaacttaattttcagctcaagttcagctcgtttggttcatgaaccaagttcaacgagttaattgtcgaatcgagtcccaa 22184606  T
Q  124 actattttcgagttggttcggttcattgtcagcccta 160  Q
    |||||| ||||||||||||||||||||| ||||||||    
T  22184607 actattgtcgagttggttcggttcattgccagcccta 22184643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 24 - 151
Target Start/End: Original strand, 51995082 - 51995209
Alignment:
Q  24 gttcatctcatttagttaatgaacttaattttccgctcaagttcagttcatttggttcataaatcaagttcaacgagataattatcgaatcgagtttcga 123  Q
    ||||| ||| |||| ||||  |||||||||||  |||||||||| | ||||||||||||| || ||||||||||||  ||||||||||||||||| ||||    
T  51995082 gttcaactcgtttatttaacaaacttaattttgagctcaagttcggctcatttggttcatgaaccaagttcaacgaattaattatcgaatcgagtctcga 51995181  T
Q  124 actattttcgagttggttcggttcattg 151  Q
    ||||||||||||||||||||||||||||    
T  51995182 actattttcgagttggttcggttcattg 51995209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 30 - 151
Target Start/End: Complemental strand, 12673158 - 12673037
Alignment:
Q  30 ctcatttagttaatgaacttaattttccgctcaagttcagttcatttggttcataaatcaagttcaacgagataattatcgaatcgagtttcgaactatt 129  Q
    |||||||| ||||||| ||||||||||  |||||||||   ||||||||||||| || |||||||||||||  |||||||||||||| | ||||||||||    
T  12673158 ctcatttatttaatgagcttaattttcaactcaagttcgactcatttggttcatgaaccaagttcaacgagtcaattatcgaatcgaatctcgaactatt 12673059  T
Q  130 ttcgagttggttcggttcattg 151  Q
    ||||||||||||||||||||||    
T  12673058 ttcgagttggttcggttcattg 12673037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 20 - 161
Target Start/End: Complemental strand, 15697223 - 15697082
Alignment:
Q  20 tcatgttcatctcatttagttaatgaacttaattttccgctcaagttcagttcatttggttcataaatcaagttcaacgagataattatcgaatcgagtt 119  Q
    ||||||||| |||||| |||||| ||||||||||||  |||||||||||| | ||||||||||| |||||||||||||||   |||| |||| ||||||     
T  15697223 tcatgttcagctcattaagttaacgaacttaatttttagctcaagttcagcttatttggttcatgaatcaagttcaacgaatcaattgtcgagtcgagtc 15697124  T
Q  120 tcgaactattttcgagttggttcggttcattgtcagccctac 161  Q
    ||||||| | |||||||||  |||||||||||||||||||||    
T  15697123 tcgaactttattcgagttgtctcggttcattgtcagccctac 15697082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 33 - 161
Target Start/End: Complemental strand, 48151253 - 48151125
Alignment:
Q  33 atttagttaatgaacttaattttccgctcaagttcagttcatttggttcataaatcaagttcaacgagataattatcgaatcgagtttcgaactattttc 132  Q
    ||||| |||| ||||||||||||| |||||||||||| ||||||||||  | || |||||||||| |||||||| |||||||||||||||||||||| ||    
T  48151253 atttatttaacgaacttaattttcagctcaagttcagctcatttggtttgtgaaccaagttcaacaagataattgtcgaatcgagtttcgaactattgtc 48151154  T
Q  133 gagttggttcggttcattgtcagccctac 161  Q
    |||||||||||  ||||||  ||||||||    
T  48151153 gagttggttcgaatcattgcaagccctac 48151125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 58 - 161
Target Start/End: Complemental strand, 4274658 - 4274555
Alignment:
Q  58 gctcaagttcagttcatttggttcataaatcaagttcaacgagataattatcgaatcgagtttcgaactattttcgagttggttcggttcattgtcagcc 157  Q
    |||||||||| | ||||||| ||||| ||||| |||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||  ||||    
T  4274658 gctcaagttcggctcatttgtttcatgaatcaggttcaacgagataattgtcgaatcaagtttcgaactattttcgagttggttcggttcattgctagcc 4274559  T
Q  158 ctac 161  Q
    ||||    
T  4274558 ctac 4274555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 12 - 159
Target Start/End: Complemental strand, 19455306 - 19455159
Alignment:
Q  12 tatatatctcatgttcatctcatttagttaatgaacttaattttccgctcaagttcagttcatttggttcataaatcaagttcaacgagataattatcga 111  Q
    |||||| |||| ||||| ||||||||| |||  ||||||||||||  ||||||||||| ||||||| ||||| || ||||||||||||  ||||| || |    
T  19455306 tatatagctcaagttcaactcatttagataacaaacttaattttcaactcaagttcagctcatttgattcatgaaccaagttcaacgaattaattgtcaa 19455207  T
Q  112 atcgagtttcgaactattttcgagttggttcggttcattgtcagccct 159  Q
    ||||||||||||||||||||||| |  | |||||||||||||||||||    
T  19455206 atcgagtttcgaactattttcgaataagctcggttcattgtcagccct 19455159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 30 - 160
Target Start/End: Complemental strand, 49405765 - 49405635
Alignment:
Q  30 ctcatttagttaatgaacttaattttccgctcaagttcagttcatttggttcataaatcaagttcaacgagataattatcgaatcgagtttcgaactatt 129  Q
    |||||||| || | || ||||||||||   ||||||||   |||||||||||||||| ||||||||||||   ||||| |||||||||||||||||||||    
T  49405765 ctcatttatttgacgagcttaattttcgattcaagttcgactcatttggttcataaaccaagttcaacgaatcaattaccgaatcgagtttcgaactatt 49405666  T
Q  130 ttcgagttggttcggttcattgtcagcccta 160  Q
    |||| ||||||||||||||||||||||||||    
T  49405665 ttcgggttggttcggttcattgtcagcccta 49405635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 11 - 159
Target Start/End: Original strand, 7505520 - 7505668
Alignment:
Q  11 atatatatctcatgttcatctcatttagttaatgaacttaattttccgctcaagttcagttcatttggttcataaatcaagttcaacgagataattatcg 110  Q
    ||||||| |||| ||||| ||||||||||||| ||| ||||||||  |||||||||| | ||||||||||||| |||||||||||||||  |||||| ||    
T  7505520 atatataactcaagttcaactcatttagttaacgaatttaatttttagctcaagttcggctcatttggttcatgaatcaagttcaacgaactaattaccg 7505619  T
Q  111 aatcgagtttcgaactattttcgagttggttcggttcattgtcagccct 159  Q
    | || ||||  ||||| | |||||||||  |||||||||||||||||||    
T  7505620 agtcaagttctgaactttattcgagttgtatcggttcattgtcagccct 7505668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 24 - 160
Target Start/End: Original strand, 13455705 - 13455841
Alignment:
Q  24 gttcatctcatttagttaatgaacttaattttccgctcaagttcagttcatttggttcataaatcaagttcaacgagataattatcgaatcgagtttcga 123  Q
    ||||| ||| |||| |||| ||||||||||||  |||||||||    |||||||||||||||||||||||||||||  ||||||||||||||| | || |    
T  13455705 gttcaactcgtttatttaacgaacttaattttgagctcaagttggactcatttggttcataaatcaagttcaacgaattaattatcgaatcgaatctcaa 13455804  T
Q  124 actattttcgagttggttcggttcattgtcagcccta 160  Q
    | ||||||| ||||||||||||| |||||||||||||    
T  13455805 attattttcaagttggttcggtttattgtcagcccta 13455841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 33 - 160
Target Start/End: Complemental strand, 46944671 - 46944544
Alignment:
Q  33 atttagttaatgaacttaattttccgctcaagttcagttcatttggttcataaatcaagttcaacgagataattatcgaatcgagtttcgaactattttc 132  Q
    ||||| |||| || ||||| ||||  |||||||||   ||||||||||||| || |||||||||||||  |||||||||||||| | ||||||||||||     
T  46944671 atttatttaacgagcttaaatttcaactcaagttcgactcatttggttcatgaaccaagttcaacgagccaattatcgaatcgaatctcgaactattttt 46944572  T
Q  133 gagttggttcggttcattgtcagcccta 160  Q
    ||||||||||||||||||||||||||||    
T  46944571 gagttggttcggttcattgtcagcccta 46944544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 19 - 160
Target Start/End: Complemental strand, 12789693 - 12789552
Alignment:
Q  19 ctcatgttcatctcatttagttaatgaacttaattttccgctcaagttcagttcatttggttcataaatcaagttcaacgagataattatcgaatcgagt 118  Q
    |||| ||||| |||||||| |||| ||||||||||||| |||||||||||| || || |||||||||| |||||||||||   ||  |||||| |||| |    
T  12789693 ctcaagttcagctcatttaattaacgaacttaattttcagctcaagttcagctcgttaggttcataaaccaagttcaacggattagatatcgagtcgaat 12789594  T
Q  119 ttcgaactattttcgagttggttcggttcattgtcagcccta 160  Q
     |||||||||  ||||||||||||||||||||| ||||||||    
T  12789593 gtcgaactataatcgagttggttcggttcattgccagcccta 12789552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 19 - 160
Target Start/End: Original strand, 52813600 - 52813741
Alignment:
Q  19 ctcatgttcatctcatttagttaatgaacttaattttccgctcaagttcagttcatttggttcataaatcaagttcaacgagataattatcgaatcgagt 118  Q
    |||| ||||| |||||||  |||| ||||||||||||| ||| |||||||| || |||||||||| || ||||||||||||| ||||| || ||| ||||    
T  52813600 ctcaagttcagctcatttgtttaacgaacttaattttcagcttaagttcagctcgtttggttcatgaaccaagttcaacgagttaattgtcaaatagagt 52813699  T
Q  119 ttcgaactattttcgagttggttcggttcattgtcagcccta 160  Q
      | ||||||| |||||||||||||||||||||||| |||||    
T  52813700 cccaaactattgtcgagttggttcggttcattgtcaacccta 52813741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 11 - 160
Target Start/End: Original strand, 56224136 - 56224285
Alignment:
Q  11 atatatatctcatgttcatctcatttagttaatgaacttaattttccgctcaagttcagttcatttggttcataaatcaagttcaacgagataattatcg 110  Q
    |||||||  ||| ||||| || ||||| |||| ||| ||||||||| |||||||||| | |||||||||| || || ||||||||||||  ||||| | |    
T  56224136 atatatagttcaagttcaacttatttaattaacgaatttaattttcagctcaagttcggctcatttggtttattaaccaagttcaacgaattaattgttg 56224235  T
Q  111 aatcgagtttcgaactattttcgagttggttcggttcattgtcagcccta 160  Q
    | || ||||||||||||| || ||||||||||||||||||||||||||||    
T  56224236 agtcaagtttcgaactatgtttgagttggttcggttcattgtcagcccta 56224285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 65 - 161
Target Start/End: Original strand, 9959377 - 9959472
Alignment:
Q  65 ttcagttcatttggttcataaatcaagttcaacgagataattatcgaatcgagtttcgaactattttcgagttggttcggttcattgtcagccctac 161  Q
    ||||| ||||||| ||||| || ||||||||||||| || |||| |||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  9959377 ttcagctcatttgattcatgaa-caagttcaacgagttatttatagaatcgagtttcgaactattgtcgagttggttcggttcattgtcagccctac 9959472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 25 - 157
Target Start/End: Original strand, 27891392 - 27891523
Alignment:
Q  25 ttcatctcatttagttaatgaacttaattttccgctcaagttcagttcatttggttcataaatcaagttcaacgagataattatcgaatcgagtttcgaa 124  Q
    |||| |||||||| ||||  || || |||||| |||||||||||| ||||||| ||||| || ||||||||||||| ||||| |||||||||||| ||||    
T  27891392 ttcagctcatttatttaacaaatttgattttcagctcaagttcagctcatttg-ttcatgaaccaagttcaacgagttaattgtcgaatcgagttccgaa 27891490  T
Q  125 ctattttcgagttggttcggttcattgtcagcc 157  Q
    ||||| |||||||| |||| |||||||||||||    
T  27891491 ctattgtcgagttgattcgattcattgtcagcc 27891523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 30 - 161
Target Start/End: Complemental strand, 48731303 - 48731172
Alignment:
Q  30 ctcatttagttaatgaacttaattttccgctcaagttcagttcatttggttcataaatcaagttcaacgagataattatcgaatcgagtttcgaactatt 129  Q
    |||||||| |||| ||||||||||||  |||||||||||||| ||||||||||| || ||| ||||| |    |||| |||| |||| |||||||||||     
T  48731303 ctcatttaattaacgaacttaatttttagctcaagttcagtttatttggttcatgaaccaaattcaatggaccaattgtcgagtcgaatttcgaactata 48731204  T
Q  130 ttcgagttggttcggttcattgtcagccctac 161  Q
    |||||||||||||||||||||| |||||||||    
T  48731203 ttcgagttggttcggttcattggcagccctac 48731172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 30 - 160
Target Start/End: Complemental strand, 48802606 - 48802475
Alignment:
Q  30 ctcatttagttaatgaacttaattttccgctcaagttcagttcatttggttcataaatcaagttcaacgagat-aattatcgaatcgagtttcgaactat 128  Q
    |||||||| || | || ||||||||||  |||||||||   ||||||||||||| ||||||||||||  | || ||| | | ||||||||||||||||||    
T  48802606 ctcatttatttgacgagcttaattttcgactcaagttcgactcatttggttcatgaatcaagttcaaaaaaatcaataaccaaatcgagtttcgaactat 48802507  T
Q  129 tttcgagttggttcggttcattgtcagcccta 160  Q
    ||||||||||||||||||||||||||||||||    
T  48802506 tttcgagttggttcggttcattgtcagcccta 48802475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 30 - 160
Target Start/End: Original strand, 80507 - 80637
Alignment:
Q  30 ctcatttagttaatgaacttaattttccgctcaagttcagttcatttggttcataaatcaagttcaacgagataattatcgaatcgagtttcgaactatt 129  Q
    |||||||| || | || ||||||||||  |||||||||   ||||||||||||| || |||||||||||| | ||||| |||||| | ||||||||||||    
T  80507 ctcatttatttgacgagcttaattttcaactcaagttcgactcatttggttcatgaaccaagttcaacgaaacaattaccgaatcaaatttcgaactatt 80606  T
Q  130 ttcgagttggttcggttcattgtcagcccta 160  Q
    |||||||||| ||||||||||| ||||||||    
T  80607 ttcgagttggatcggttcattgccagcccta 80637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 71 - 161
Target Start/End: Complemental strand, 51408038 - 51407948
Alignment:
Q  71 tcatttggttcataaatcaagttcaacgagataattatcgaatcgagtttcgaactattttcgagttggttcggttcattgtcagccctac 161  Q
    ||||||||||||| || |||||| |||||  |||||| |||||||||| ||||||||||||||||||||||| ||||||||||||||||||    
T  51408038 tcatttggttcatgaaccaagttgaacgaattaattaccgaatcgagtctcgaactattttcgagttggttcagttcattgtcagccctac 51407948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 58 - 163
Target Start/End: Original strand, 38791730 - 38791834
Alignment:
Q  58 gctcaagttcagttcatttggttcataaatcaagttcaacgagataattatcgaatcgagtttcgaactattttcgagttggttcggttcattgtcagcc 157  Q
    |||||||||||| ||||||||||||| || ||||||||||||| ||||| |||||| || || | ||||||| ||||||||||||||||||||| |||||    
T  38791730 gctcaagttcagctcatttggttcatgaaccaagttcaacgagttaattgtcgaattga-ttccaaactattgtcgagttggttcggttcattgccagcc 38791828  T
Q  158 ctacat 163  Q
    ||||||    
T  38791829 ctacat 38791834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 24 - 160
Target Start/End: Original strand, 40797834 - 40797970
Alignment:
Q  24 gttcatctcatttagttaatgaacttaattttccgctcaagttcagttcatttggttcataaatcaagttcaacgagataattatcgaatcgagtttcga 123  Q
    ||||| |||||||| |||| || ||||||||||  |||||||||   ||||||||||||| || ||||||||| ||   |||||||||||| ||| ||||    
T  40797834 gttcaactcatttatttaacgagcttaattttcaactcaagttcgactcatttggttcatgaaccaagttcaatgaaccaattatcgaatcaagtatcga 40797933  T
Q  124 actattttcgagttggttcggttcattgtcagcccta 160  Q
    |||||||| ||||||||||||||||||| ||| ||||    
T  40797934 actatttttgagttggttcggttcattgccagtccta 40797970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 74 - 161
Target Start/End: Complemental strand, 28265759 - 28265672
Alignment:
Q  74 tttggttcataaatcaagttcaacgagataattatcgaatcgagtttcgaactattttcgagttggttcggttcattgtcagccctac 161  Q
    |||||||||| || ||||||||||||  |||||| |||||||||| ||||||||||||||||||||||| |||||||| |||||||||    
T  28265759 tttggttcatgaaccaagttcaacgaattaattaccgaatcgagtctcgaactattttcgagttggttcagttcattgccagccctac 28265672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 24 - 154
Target Start/End: Complemental strand, 36156430 - 36156300
Alignment:
Q  24 gttcatctcatttagttaatgaacttaattttccgctcaagttcagttcatttggttcataaatcaagttcaacgagataattatcgaatcgagtttcga 123  Q
    ||||| |||| |||||| | ||||||||||||| |||||||||| | ||||||||||||  || ||||||||||||   |||| ||||||||| || |||    
T  36156430 gttcagctcaattagttgacgaacttaattttcagctcaagttcggctcatttggttcaagaaccaagttcaacgaatcaattgtcgaatcgaattacga 36156331  T
Q  124 actattttcgagttggttcggttcattgtca 154  Q
    ||| |  ||||||||||||||||||||||||    
T  36156330 actttaatcgagttggttcggttcattgtca 36156300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 74 - 160
Target Start/End: Complemental strand, 55892071 - 55891985
Alignment:
Q  74 tttggttcataaatcaagttcaacgagataattatcgaatcgagtttcgaactattttcgagttggttcggttcattgtcagcccta 160  Q
    |||||||||| || ||||||||||||  |||||| |||||||||| |||||||||||| |||||||||| |||||||||||||||||    
T  55892071 tttggttcatgaaccaagttcaacgaattaattaccgaatcgagtctcgaactatttttgagttggttcagttcattgtcagcccta 55891985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 24 - 160
Target Start/End: Original strand, 9469781 - 9469917
Alignment:
Q  24 gttcatctcatttagttaatgaacttaattttccgctcaagttcagttcatttggttcataaatcaagttcaacgagat-aattatcgaatcgagtttcg 122  Q
    ||||| |||||||| | || ||||||||||||| |||||||||  | ||||||||||||| || |||||||||  |||  |||| |||| |||| || ||    
T  9469781 gttcagctcatttaatcaacgaacttaattttcagctcaagtttggctcatttggttcatgaaccaagttcaat-agaccaattgtcgagtcgaattacg 9469879  T
Q  123 aactattttcgagttggttcggttcattgtcagcccta 160  Q
    |||||| |||||||||||||||||||||||||||||||    
T  9469880 aactatattcgagttggttcggttcattgtcagcccta 9469917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 19 - 160
Target Start/End: Original strand, 21441580 - 21441721
Alignment:
Q  19 ctcatgttcatctcatttagttaatgaacttaattttccgctcaagttcagttcatttggttcataaatcaagttcaacgagataattatcgaatcgagt 118  Q
    |||| ||||| |||||||| |||| ||||||||||||| |||||||| ||| || || ||||||| || |||||||||||   ||  |||||| |||| |    
T  21441580 ctcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattagatatcgagtcgaat 21441679  T
Q  119 ttcgaactattttcgagttggttcggttcattgtcagcccta 160  Q
     |||||||||  |||||||||||||||||||||||| |||||    
T  21441680 gtcgaactataatcgagttggttcggttcattgtcaacccta 21441721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 19 - 160
Target Start/End: Original strand, 53369871 - 53370012
Alignment:
Q  19 ctcatgttcatctcatttagttaatgaacttaattttccgctcaagttcagttcatttggttcataaatcaagttcaacgagataattatcgaatcgagt 118  Q
    |||| ||||| |||||||| |||| ||||||||||||| |||||||| ||| || || ||||||| || |||||||||||   ||| |||||| | || |    
T  53369871 ctcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagttgaat 53369970  T
Q  119 ttcgaactattttcgagttggttcggttcattgtcagcccta 160  Q
     |||||||||  ||||||||||||||||||||| ||||||||    
T  53369971 gtcgaactataatcgagttggttcggttcattgccagcccta 53370012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 45 - 161
Target Start/End: Original strand, 13761824 - 13761940
Alignment:
Q  45 aacttaattttccgctcaagttcagttcatttggttcataaatcaagttcaacgagataattatcgaatcgagtttcgaactattttcgagttggttcgg 144  Q
    |||||||||||| |||||| ||||| ||||||||||||| || ||||| ||||||| ||||| |||||||||||| |||||| | ||||| |||  || |    
T  13761824 aacttaattttcagctcaaattcagctcatttggttcatgaaccaagtccaacgagttaattgtcgaatcgagttccgaactttgttcgaattgtctcag 13761923  T
Q  145 ttcattgtcagccctac 161  Q
    | |||||||||||||||    
T  13761924 tccattgtcagccctac 13761940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 24 - 160
Target Start/End: Original strand, 36543785 - 36543921
Alignment:
Q  24 gttcatctcatttagttaatgaacttaattttccgctcaagttcagttcatttggttcataaatcaagttcaacgagataattatcgaatcgagtttcga 123  Q
    ||||| |||||||| |||| ||||||||||||| |||||||||  | | ||||||||||| || ||||||||| |    |||| |||| |||| || |||    
T  36543785 gttcagctcatttaattaacgaacttaattttcagctcaagtttggcttatttggttcatgaaccaagttcaatggaccaattgtcgagtcgaattacga 36543884  T
Q  124 actattttcgagttggttcggttcattgtcagcccta 160  Q
    ||||| ||||||||||||| |||||||||||||||||    
T  36543885 actatattcgagttggttcagttcattgtcagcccta 36543921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 24 - 160
Target Start/End: Complemental strand, 50147054 - 50146918
Alignment:
Q  24 gttcatctcatttagttaatgaacttaattttccgctcaagttcagttcatttggttcataaatcaagttcaacgagataattatcgaatcgagtttcga 123  Q
    ||||| |||| |||||| | ||||||||||||| |||||||| | ||||||||||||||| || ||||||||||||   |||| ||||||||| || |||    
T  50147054 gttcagctcaattagttcacgaacttaattttcagctcaagtccggttcatttggttcatgaaccaagttcaacgaatcaattgtcgaatcgaattacga 50146955  T
Q  124 actattttcgagttggttcggttcattgtcagcccta 160  Q
    ||| |  |||| ||||||||||||||||  |||||||    
T  50146954 actttaatcgaattggttcggttcattgctagcccta 50146918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 48 - 154
Target Start/End: Complemental strand, 34980616 - 34980510
Alignment:
Q  48 ttaattttccgctcaagttcagttcatttggttcataaatcaagttcaacgagataattatcgaatcgagtttcgaactattttcgagttggttcggttc 147  Q
    |||||||||  |||||||||  |||||||| ||||| |||||||||||| ||   |||||||||||||||| || ||||||||||||||||||| |||||    
T  34980616 ttaattttcaactcaagttcgattcatttgattcatgaatcaagttcaatgaatcaattatcgaatcgagtctcaaactattttcgagttggtttggttc 34980517  T
Q  148 attgtca 154  Q
    | |||||    
T  34980516 actgtca 34980510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 19 - 161
Target Start/End: Original strand, 50606007 - 50606149
Alignment:
Q  19 ctcatgttcatctcatttagttaatgaacttaattttccgctcaagttcagttcatttggttcataaatcaagttcaacgagataattatcgaatcgagt 118  Q
    |||| ||||| |||||||| |||| ||||||||||||| |||||||| ||| || || ||||||| || |||||||||||   ||  |||||| |||| |    
T  50606007 ctcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattagatatcgagtcgaat 50606106  T
Q  119 ttcgaactattttcgagttggttcggttcattgtcagccctac 161  Q
     |||||||||  |||| |||||||||||||||| |||||||||    
T  50606107 gtcgaactataatcgaattggttcggttcattgccagccctac 50606149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 24 - 154
Target Start/End: Complemental strand, 52733836 - 52733707
Alignment:
Q  24 gttcatctcatttagttaatgaacttaattttccgctcaagttcagttcatttggttcataaatcaagttcaacgagataattatcgaatcgagtttcga 123  Q
    ||||| || ||||| |||| ||||||||||||| |||||| ||||  ||||||||||||| ||| || ||||||||| ||||||||||||| | ||||||    
T  52733836 gttcaacttatttatttaacgaacttaattttcagctcaa-ttcaactcatttggttcatgaattaaattcaacgagttaattatcgaatcaaatttcga 52733738  T
Q  124 actattttcgagttggttcggttcattgtca 154  Q
    | |||| |  ||||||||| |||||||||||    
T  52733737 attattattaagttggttcagttcattgtca 52733707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 19 - 160
Target Start/End: Complemental strand, 24008044 - 24007903
Alignment:
Q  19 ctcatgttcatctcatttagttaatgaacttaattttccgctcaagttcagttcatttggttcataaatcaagttcaacgagataattatcgaatcgagt 118  Q
    |||| ||||| |||||||| |||| ||||||||||||   |||||||| |  || || ||||||| || ||||||||||||   ||| ||| |||||| |    
T  24008044 ctcaagttcaactcatttatttaacgaacttaattttaaactcaagtttaactcgttaggttcatgaaccaagttcaacgaatcaatcatcaaatcgaat 24007945  T
Q  119 ttcgaactattttcgagttggttcggttcattgtcagcccta 160  Q
     |||||||||||||||||||||||  ||||||||||||||||    
T  24007944 ctcgaactattttcgagttggttcaattcattgtcagcccta 24007903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 19 - 160
Target Start/End: Original strand, 48977575 - 48977716
Alignment:
Q  19 ctcatgttcatctcatttagttaatgaacttaattttccgctcaagttcagttcatttggttcataaatcaagttcaacgagataattatcgaatcgagt 118  Q
    |||| ||||| |||||||| |||| ||| ||||||||| ||||| || ||| ||||| ||||||| ||  |||||||||||  ||| |||||| |||| |    
T  48977575 ctcaagttcagctcatttaattaacgaatttaattttcagctcatgtccagctcattaggttcatgaacgaagttcaacgaattaaatatcgagtcgaat 48977674  T
Q  119 ttcgaactattttcgagttggttcggttcattgtcagcccta 160  Q
     ||||| |||  ||||||||||||||||||||| ||||||||    
T  48977675 gtcgaattataatcgagttggttcggttcattgccagcccta 48977716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 11 - 160
Target Start/End: Original strand, 52706208 - 52706357
Alignment:
Q  11 atatatatctcatgttcatctcatttagttaatgaacttaattttccgctcaagttcagttcatttggttcataaatcaagttcaacgagataattatcg 110  Q
    ||||||| |||| ||||| ||||||||||||| ||||||||| ||  |||||||||| | || |||||||||| || |||||| |||||  |||||| ||    
T  52706208 atatataactcaagttcaactcatttagttaacgaacttaatctttagctcaagttcggctcgtttggttcatgaaccaagtttaacgaactaattaccg 52706307  T
Q  111 aatcgagtttcgaactattttcgagttggttcggttcattgtcagcccta 160  Q
    | || |||| |||| | | |||||||||  ||||||||||| ||||||||    
T  52706308 agtcaagttccgaattttattcgagttgtatcggttcattgccagcccta 52706357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 19 - 161
Target Start/End: Original strand, 45674834 - 45674976
Alignment:
Q  19 ctcatgttcatctcatttagttaatgaacttaattttccgctcaagttcagttcatttggttcataaatcaagttcaacgagataattatcgaatcgagt 118  Q
    |||| ||||| |||||||| |||| ||| ||||||||| |||||||| ||| || || ||||||| || ||||||| |||   ||  |||||| |||| |    
T  45674834 ctcaagttcaactcatttaattaacgaatttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcgacggattagatatcgagtcgaat 45674933  T
Q  119 ttcgaactattttcgagttggttcggttcattgtcagccctac 161  Q
     |||||||||  ||||||||||||||||||||| |||||||||    
T  45674934 gtcgaactataatcgagttggttcggttcattgccagccctac 45674976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 19 - 160
Target Start/End: Original strand, 19852977 - 19853118
Alignment:
Q  19 ctcatgttcatctcatttagttaatgaacttaattttccgctcaagttcagttcatttggttcataaatcaagttcaacgagataattatcgaatcgagt 118  Q
    |||| ||||| |||||||| |||| ||||||||||||| |||||||| ||  || || ||||||| || |||||||||||   ||| |||||| |||| |    
T  19852977 ctcaagttcagctcatttaattaacgaacttaattttcagctcaagtccatctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaat 19853076  T
Q  119 ttcgaactattttcgagttggttcggttcattgtcagcccta 160  Q
     || ||||||  ||||||||||||| ||||||| ||||||||    
T  19853077 gtcaaactataatcgagttggttcgattcattgacagcccta 19853118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 71 - 160
Target Start/End: Complemental strand, 36644073 - 36643985
Alignment:
Q  71 tcatttggttcataaatcaagttcaacgagataattatcgaatcgagtttcgaactattttcgagttggttcggttcattgtcagcccta 160  Q
    ||||||||||||| ||  |||||||| ||| |||||||| ||| |||| |||||||||||| |||||||||||||| |||||||||||||    
T  36644073 tcatttggttcatgaacaaagttcaatgagttaattatcaaat-gagtctcgaactattttggagttggttcggttgattgtcagcccta 36643985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 103 - 160
Target Start/End: Complemental strand, 50710841 - 50710784
Alignment:
Q  103 aattatcgaatcgagtttcgaactattttcgagttggttcggttcattgtcagcccta 160  Q
    ||||||| |||||||| ||||||||||||||||||| |||||||||||||||||||||    
T  50710841 aattatcaaatcgagtatcgaactattttcgagttgattcggttcattgtcagcccta 50710784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 24 - 160
Target Start/End: Original strand, 1803502 - 1803633
Alignment:
Q  24 gttcatctcatttagttaatgaacttaattttccgctcaagttcagttcatttggttcataaatcaagttcaacgagataattatcgaatcgagtttcga 123  Q
    ||||| |||||||| |||| || |||||||||   |||||||||   ||||| ||||||| ||||||||| |||||   ||||||||||||     |||     
T  1803502 gttcaactcatttatttaacgagcttaattttaaactcaagttcgactcattaggttcatgaatcaagtttaacgaatcaattatcgaatc-----tcgc 1803596  T
Q  124 actattttcgagttggttcggttcattgtcagcccta 160  Q
    ||| |||||||||||||||||||||||||||||||||    
T  1803597 actcttttcgagttggttcggttcattgtcagcccta 1803633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 88 - 151
Target Start/End: Complemental strand, 9222204 - 9222141
Alignment:
Q  88 caagttcaacgagataattatcgaatcgagtttcgaactattttcgagttggttcggttcattg 151  Q
    ||||||||||||   |||| ||||||||||| ||||||||||||||||||||||||||||||||    
T  9222204 caagttcaacgaaccaattgtcgaatcgagtatcgaactattttcgagttggttcggttcattg 9222141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 11 - 160
Target Start/End: Original strand, 22721319 - 22721467
Alignment:
Q  11 atatatatctcatgttcatctcatttagttaatgaacttaattttccgctcaagttcagttcatttggttcataaatcaagttcaacgagataattatcg 110  Q
    ||||||| |||| ||||| |||||||| |||| ||||||||||||  ||| |||||    || |||||||||| || ||||||||| ||  |||||| ||    
T  22721319 atatataactcaagttcaactcatttatttaacgaacttaatttta-gcttaagtttgcctcgtttggttcatgaaccaagttcaatgaactaattaccg 22721417  T
Q  111 aatcgagtttcgaactattttcgagttggttcggttcattgtcagcccta 160  Q
    ||||||||| |||||| | |||||||||  ||| ||||||| ||||||||    
T  22721418 aatcgagttccgaactttattcgagttgtctcgattcattgccagcccta 22721467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 24 - 161
Target Start/End: Complemental strand, 48339235 - 48339098
Alignment:
Q  24 gttcatctcatttagttaatgaacttaattttccgctcaagttcagttcatttggttcataaatcaagttcaacgagataattatcgaatcgagtttcga 123  Q
    ||||| |||| |||||| | ||||||||||||| ||||||||||   ||||||| ||||| || |||||||||| |   | || ||||||||| || |||    
T  48339235 gttcagctcaattagttgacgaacttaattttcagctcaagttcgactcatttgattcatgaaccaagttcaacaaatcagttgtcgaatcgaattacga 48339136  T
Q  124 actattttcgagttggttcggttcattgtcagccctac 161  Q
    ||| |  | ||||||||||| |||||||||||||||||    
T  48339135 actctaattgagttggttcgattcattgtcagccctac 48339098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 11 - 155
Target Start/End: Complemental strand, 49083383 - 49083239
Alignment:
Q  11 atatatatctcatgttcatctcatttagttaatgaacttaattttccgctcaagttcagttcatttggttcataaatcaagttcaacgaga-taattatc 109  Q
    ||||||| |||| || || |||||||| |||| ||| ||||||||| | |||||||||  ||||| |||| || || |||||||||| ||| ||||||||    
T  49083383 atatataactcaagtacagctcatttaattaacgaatttaattttcagatcaagttcaactcattaggtttatgaaccaagttcaac-agactaattatc 49083285  T
Q  110 gaatcgagtttcgaactattttcgagttggttcggttcattgtcag 155  Q
    || || | |||| ||||||| || |||||||||| |||||||||||    
T  49083284 gagtccaatttcaaactattctcaagttggttcgattcattgtcag 49083239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 13 - 160
Target Start/End: Complemental strand, 6866250 - 6866109
Alignment:
Q  13 atatatctcatgttcatctcatttagttaatgaacttaattttccgctcaagttcagttcatttggttcataaatcaagttcaacgagataattatcgaa 112  Q
    ||||| |||| ||||| |||| |||||| | ||||||||||||| |||||||||| | ||||||||||||| || ||||||  ||||   ||||||||||    
T  6866250 atatagctcaagttcagctcaattagttgacgaacttaattttcagctcaagttcggctcatttggttcatgaaccaagtttgacgaatcaattatcgaa 6866151  T
Q  113 tcgagtttcgaactattttcgagttggttcggttcattgtcagcccta 160  Q
    || |      |||| |  |||||||||||||||||||||||| |||||    
T  6866150 tcaa------aactttaatcgagttggttcggttcattgtcaacccta 6866109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 71 - 155
Target Start/End: Original strand, 28470870 - 28470953
Alignment:
Q  71 tcatttggttcataaatcaagttcaacgagataattatcgaatcgagtttcgaactattttcgagttggttcggttcattgtcag 155  Q
    ||||||||||||| || ||||||||||||  |||||| ||||||||| |||| ||| ||||||||||||||  ||||||||||||    
T  28470870 tcatttggttcatgaaccaagttcaacgaattaattaccgaatcgag-ttcgtacttttttcgagttggtttagttcattgtcag 28470953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 74 - 161
Target Start/End: Original strand, 43387311 - 43387398
Alignment:
Q  74 tttggttcataaatcaagttcaacgagataattatcgaatcgagtttcgaactattttcgagttggttcggttcattgtcagccctac 161  Q
    |||||||||| || ||| ||||||||| ||||| ||||||| |||    ||||||| ||||||||||||||||||||| |||||||||    
T  43387311 tttggttcatgaaccaaattcaacgagttaattgtcgaatcaagtcctaaactattgtcgagttggttcggttcattgccagccctac 43387398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 62 - 156
Target Start/End: Complemental strand, 9874306 - 9874212
Alignment:
Q  62 aagttcagttcatttggttcataaatcaagttcaacgagataattatcgaatcgagtttcgaactattttcgagttggttcggttcattgtcagc 156  Q
    |||||| | |||||||||||||  | ||| ||||||||  ||||||  ||||||| | | |||||||||| ||||||||||||||||||||||||    
T  9874306 aagttcggctcatttggttcatgtaccaatttcaacgaattaattactgaatcgaatcttgaactatttttgagttggttcggttcattgtcagc 9874212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 25 - 147
Target Start/End: Complemental strand, 44791378 - 44791256
Alignment:
Q  25 ttcatctcatttagttaatgaacttaattttccgctcaagttcagttcatttggttcataaatcaagttcaacgagataattatcgaatcgagtttcgaa 124  Q
    |||| |||||||| |||| ||||||||||||| | |||||| ||| || || ||||||| || |||||||||||   ||  |||||| |||| | |||||    
T  44791378 ttcagctcatttaattaacgaacttaattttcagttcaagtgcagctcgttaggttcatgaaccaagttcaacggattagatatcgagtcgaatgtcgaa 44791279  T
Q  125 ctattttcgagttggttcggttc 147  Q
    ||||  |||||||||||||||||    
T  44791278 ctataatcgagttggttcggttc 44791256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 123 - 160
Target Start/End: Original strand, 25134665 - 25134702
Alignment:
Q  123 aactattttcgagttggttcggttcattgtcagcccta 160  Q
    ||||||||||||||||||||||||||||||||||||||    
T  25134665 aactattttcgagttggttcggttcattgtcagcccta 25134702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 33 - 150
Target Start/End: Original strand, 34718152 - 34718269
Alignment:
Q  33 atttagttaatgaacttaattttccgctcaagttcagttcatttggttcataaatcaagttcaacgagataattatcgaatcgagtttcgaactattttc 132  Q
    ||||| |||| ||| ||||||||| ||| ||||||   |||||| ||||||||| ||| ||||||||| | | | || ||||||||||| ||||||| ||    
T  34718152 atttatttaacgaaattaattttcagctgaagttcgactcatttagttcataaaccaaattcaacgagttgactgtcaaatcgagtttcaaactattgtc 34718251  T
Q  133 gagttggttcggttcatt 150  Q
    |||||  |||||||||||    
T  34718252 gagttatttcggttcatt 34718269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 109 - 160
Target Start/End: Original strand, 44378327 - 44378378
Alignment:
Q  109 cgaatcgagtttcgaactattttcgagttggttcggttcattgtcagcccta 160  Q
    |||||||||| || |||||||||||| |||||||||||||||| ||||||||    
T  44378327 cgaatcgagtctcaaactattttcgaattggttcggttcattggcagcccta 44378378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 19 - 160
Target Start/End: Original strand, 24550076 - 24550217
Alignment:
Q  19 ctcatgttcatctcatttagttaatgaacttaattttccgctcaagttcagttcatttggttcat-aaatcaagttcaacgagataattatcgaatcgag 117  Q
    |||| ||||| |||||||||||||  |||||||||||  |||||||||||  ||| |||||| || ||||||||||||||||   ||||| ||| ||||     
T  24550076 ctcaagttcaactcatttagttaacaaacttaatttttagctcaagttcaactcagttggtttataaaatcaagttcaacgaatcaattaccgagtcgaa 24550175  T
Q  118 tttcgaactattttcgagttggttcggttcattgtcagcccta 160  Q
    | ||||| | |||| ||| ||||| | |||||||| |||||||    
T  24550176 tgtcgaa-tttttttgagctggtttgattcattgttagcccta 24550217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 11 - 160
Target Start/End: Complemental strand, 9906505 - 9906356
Alignment:
Q  11 atatatatctcatgttcatctcatttagttaatgaacttaattttccgctcaagttcagttcatttggttcataaatcaagttcaacgagataattatcg 110  Q
    ||||||| |||| ||||| || |||||  ||||||  |||||||||  |||||||||   ||||||   |||| |||||||||||||||  ||||||  |    
T  9906505 atatataactcaagttcaacttatttatataatgagtttaattttcaactcaagttcgaatcatttaagtcatgaatcaagttcaacgaactaattactg 9906406  T
Q  111 aatcgagtttcgaactattttcgagttggttcggttcattgtcagcccta 160  Q
    |||| | | || |||||||||  ||||||||  |||||||||||||||||    
T  9906405 aatcaaatctcaaactatttttaagttggtttagttcattgtcagcccta 9906356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 19 - 128
Target Start/End: Complemental strand, 43798364 - 43798255
Alignment:
Q  19 ctcatgttcatctcatttagttaatgaacttaattttccgctcaagttcagttcatttggttcataaatcaagttcaacgagataattatcgaatcgagt 118  Q
    |||| ||||| |||||||| ||||||| ||| |||||   |||||| ||   ||||||||||||  || | ||||||||||| |||||||||||||||||    
T  43798364 ctcaagttcaactcatttatttaatgatcttcattttttactcaagctcgactcatttggttcaagaaccgagttcaacgagttaattatcgaatcgagt 43798265  T
Q  119 ttcgaactat 128  Q
     || ||||||    
T  43798264 ctcaaactat 43798255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 19 - 98
Target Start/End: Original strand, 49820981 - 49821060
Alignment:
Q  19 ctcatgttcatctcatttagttaatgaacttaattttccgctcaagttcagttcatttggttcataaatcaagttcaacg 98  Q
    |||| ||||| |||||||| |||| ||||||||||||| ||| |||| ||| || || ||||||| || |||||||||||    
T  49820981 ctcaagttcagctcatttaattaacgaacttaattttcagcttaagtccagctcgttaggttcatgaaccaagttcaacg 49821060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 131 - 161
Target Start/End: Original strand, 49821070 - 49821100
Alignment:
Q  131 tcgagttggttcggttcattgtcagccctac 161  Q
    |||||||||||||||||||||||||||||||    
T  49821070 tcgagttggttcggttcattgtcagccctac 49821100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 24 - 92
Target Start/End: Original strand, 25134578 - 25134646
Alignment:
Q  24 gttcatctcatttagttaatgaacttaattttccgctcaagttcagttcatttggttcataaatcaagt 92  Q
    ||||| |||||||| |||| |||||||||||||  |||||||||   ||||||||||||| || |||||    
T  25134578 gttcaactcatttatttaacgaacttaattttcaactcaagttcgactcatttggttcatgaaccaagt 25134646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 103 - 151
Target Start/End: Original strand, 39736766 - 39736814
Alignment:
Q  103 aattatcgaatcgagtttcgaactattttcgagttggttcggttcattg 151  Q
    |||||||||||||||| || |||||||||||||||| ||| ||| ||||    
T  39736766 aattatcgaatcgagtctcaaactattttcgagttgattcagtttattg 39736814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 121 - 161
Target Start/End: Complemental strand, 49376809 - 49376769
Alignment:
Q  121 cgaactattttcgagttggttcggttcattgtcagccctac 161  Q
    |||||||| ||||| |||||||||||| |||||||||||||    
T  49376809 cgaactatattcgatttggttcggttcgttgtcagccctac 49376769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 95; Significance: 2e-46; HSPs: 35)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 11 - 161
Target Start/End: Complemental strand, 9505270 - 9505120
Alignment:
Q  11 atatatatctcatgttcatctcatttagttaatgaacttaattttccgctcaagttcagttcatttggttcataaatcaagttcaacgagataattatcg 110  Q
    |||||||||||| ||||| |||||||| |||| ||||||||||||| |||||||||||  ||||||||||||| || ||||||||||||| ||||| |||    
T  9505270 atatatatctcaagttcagctcatttatttaacgaacttaattttcagctcaagttcaactcatttggttcatgaaccaagttcaacgagttaattgtcg 9505171  T
Q  111 aatcgagtttcgaactattttcgagttggttcggttcattgtcagccctac 161  Q
    ||||||||| ||||||||| ||||||||||||||||||||| |||||||||    
T  9505170 aatcgagttccgaactattgtcgagttggttcggttcattgccagccctac 9505120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 30 - 160
Target Start/End: Original strand, 52934822 - 52934952
Alignment:
Q  30 ctcatttagttaatgaacttaattttccgctcaagttcagttcatttggttcataaatcaagttcaacgagataattatcgaatcgagtttcgaactatt 129  Q
    |||||||| |||| ||||||||||||| |||||||||||| ||||||||||||| || ||||||||| ||| |||||||||||||||||| |||||||||    
T  52934822 ctcatttatttaacgaacttaattttctgctcaagttcagctcatttggttcatgaaccaagttcaatgagttaattatcgaatcgagttccgaactatt 52934921  T
Q  130 ttcgagttggttcggttcattgtcagcccta 160  Q
     || ||||||||| |||||||| ||| ||||    
T  52934922 gtcaagttggttcagttcattgccagaccta 52934952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 30 - 160
Target Start/End: Original strand, 12710712 - 12710842
Alignment:
Q  30 ctcatttagttaatgaacttaattttccgctcaagttcagttcatttggttcataaatcaagttcaacgagataattatcgaatcgagtttcgaactatt 129  Q
    |||||||| |||| || ||||||||||  |||||||||   ||||||||||||| || |||||||||||||  |||||||||||||| | ||||||||||    
T  12710712 ctcatttatttaacgagcttaattttcaactcaagttcgactcatttggttcatgaaccaagttcaacgagtcaattatcgaatcgaatctcgaactatt 12710811  T
Q  130 ttcgagttggttcggttcattgtcagcccta 160  Q
    |||||||||||||||||||||| ||||||||    
T  12710812 ttcgagttggttcggttcattgccagcccta 12710842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 19 - 160
Target Start/End: Original strand, 52199428 - 52199569
Alignment:
Q  19 ctcatgttcatctcatttagttaatgaacttaattttccgctcaagttcagttcatttggttcataaatcaagttcaacgagataattatcgaatcgagt 118  Q
    |||| ||||| |||||||  |||| ||||||||||||| |||||||||||| || |||||||||| || ||||||||||||  ||||| |||||||||||    
T  52199428 ctcaagttcagctcatttgtttaacgaacttaattttcagctcaagttcagctcgtttggttcatgaaccaagttcaacgaattaattgtcgaatcgagt 52199527  T
Q  119 ttcgaactattttcgagttggttcggttcattgtcagcccta 160  Q
      | ||||||| ||||||||||||| ||||||||||||||||    
T  52199528 cccaaactattgtcgagttggttcgattcattgtcagcccta 52199569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 30 - 161
Target Start/End: Original strand, 25253712 - 25253843
Alignment:
Q  30 ctcatttagttaatgaacttaattttccgctcaagttcagttcatttggttcataaatcaagttcaacgagataattatcgaatcgagtttcgaactatt 129  Q
    |||||||| |||| ||||||||||||  |||||||||||| ||||||||||||| || |||||||||| || | ||| |||| ||||||| | ||||||     
T  25253712 ctcatttatttaacgaacttaatttttagctcaagttcagctcatttggttcatgaaccaagttcaacaagtttattgtcgagtcgagttccaaactata 25253811  T
Q  130 ttcgagttggttcggttcattgtcagccctac 161  Q
    |||||||||||||||||||||| |||||||||    
T  25253812 ttcgagttggttcggttcattgccagccctac 25253843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 30 - 160
Target Start/End: Complemental strand, 30662261 - 30662131
Alignment:
Q  30 ctcatttagttaatgaacttaattttccgctcaagttcagttcatttggttcataaatcaagttcaacgagataattatcgaatcgagtttcgaactatt 129  Q
    |||||||| |||| || ||||||||||  |||||||||   ||||||| ||||| || |||||||||||||  |||||||||||||| | || |||||||    
T  30662261 ctcatttatttaacgagcttaattttcaactcaagttcgactcatttgattcatgaaccaagttcaacgagtcaattatcgaatcgaatctcaaactatt 30662162  T
Q  130 ttcgagttggttcggttcattgtcagcccta 160  Q
    ||||||||||||||| |||||||||||||||    
T  30662161 ttcgagttggttcggctcattgtcagcccta 30662131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 30 - 161
Target Start/End: Complemental strand, 39469661 - 39469530
Alignment:
Q  30 ctcatttagttaatgaacttaattttccgctcaagttcagttcatttggttcataaatcaagttcaacgagataattatcgaatcgagtttcgaactatt 129  Q
    |||||||| |||| ||||||||||||| |||||||||| | ||||||| ||||| || ||||||||| |    |||||||||||||| || ||||||||     
T  39469661 ctcatttaattaacgaacttaattttcagctcaagttcggctcatttgattcatgaaccaagttcaatggaccaattatcgaatcgaattacgaactata 39469562  T
Q  130 ttcgagttggttcggttcattgtcagccctac 161  Q
    ||||||||||||| ||||||| ||||||||||    
T  39469561 ttcgagttggttcagttcattatcagccctac 39469530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 19 - 160
Target Start/End: Original strand, 32689168 - 32689309
Alignment:
Q  19 ctcatgttcatctcatttagttaatgaacttaattttccgctcaagttcagttcatttggttcataaatcaagttcaacgagataattatcgaatcgagt 118  Q
    |||| ||||| |||||||| |||| ||||||||||||| |||||||| ||| || || ||||||| || |||||||||||   ||  |||||| |||| |    
T  32689168 ctcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattagatatcgagtcgaat 32689267  T
Q  119 ttcgaactattttcgagttggttcggttcattgtcagcccta 160  Q
     |||||||||  ||||||||||||||||||||||||||||||    
T  32689268 gtcgaactataatcgagttggttcggttcattgtcagcccta 32689309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 31 - 151
Target Start/End: Original strand, 28242594 - 28242714
Alignment:
Q  31 tcatttagttaatgaacttaattttccgctcaagttcagttcatttggttcataaatcaagttcaacgagataattatcgaatcgagtttcgaactattt 130  Q
    ||||||| |||| ||| ||||||||| |||||| ||||| ||||||||||||| || ||| ||||||||| ||||| ||||||| |||| |||| ||||     
T  28242594 tcatttatttaacgaatttaattttcagctcaaattcagctcatttggttcatgaaccaaattcaacgagttaattgtcgaatcaagttccgaattattg 28242693  T
Q  131 tcgagttggttcggttcattg 151  Q
    |||||||| ||||||||||||    
T  28242694 tcgagttgattcggttcattg 28242714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 24 - 160
Target Start/End: Original strand, 39135358 - 39135494
Alignment:
Q  24 gttcatctcatttagttaatgaacttaattttccgctcaagttcagttcatttggttcataaatcaagttcaacgagataattatcgaatcgagtttcga 123  Q
    ||||| |||||||| |||| ||||||||||||| |||||||||| | ||||||||||||| || ||||||||| ||   |||| |||| |||| ||  ||    
T  39135358 gttcagctcatttaattaacgaacttaattttcagctcaagttcggctcatttggttcatgaaccaagttcaatgaaccaattgtcgagtcgaattatga 39135457  T
Q  124 actattttcgagttggttcggttcattgtcagcccta 160  Q
    ||||| ||||||||||||||||| |||| ||||||||    
T  39135458 actatattcgagttggttcggtttattgccagcccta 39135494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 24 - 160
Target Start/End: Original strand, 40943565 - 40943701
Alignment:
Q  24 gttcatctcatttagttaatgaacttaattttccgctcaagttcagttcatttggttcataaatcaagttcaacgagataattatcgaatcgagtttcga 123  Q
    ||||| |||||||| |||| || ||||||||||  |||||||||   ||||||||||||| || ||||| ||| ||   ||||||| |||||||| ||||    
T  40943565 gttcaactcatttatttaacgagcttaattttcaactcaagttcgactcatttggttcatgaaccaagtccaatgaaccaattatcaaatcgagtatcga 40943664  T
Q  124 actattttcgagttggttcggttcattgtcagcccta 160  Q
    ||||||||||||||||||||||| |||| ||||||||    
T  40943665 actattttcgagttggttcggtttattgccagcccta 40943701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 30 - 161
Target Start/End: Complemental strand, 33438861 - 33438730
Alignment:
Q  30 ctcatttagttaatgaacttaattttccgctcaagttcagttcatttggttcataaatcaagttcaacgagataattatcgaatcgagtttcgaactatt 129  Q
    |||| |||||| | ||||||||||||| ||||||||||   ||||||||||||| || ||||||||||||   |||| ||||||||| || | |||| |     
T  33438861 ctcaattagttgacgaacttaattttcagctcaagttcgactcatttggttcatgaaccaagttcaacgaatcaattgtcgaatcgaattacaaacttta 33438762  T
Q  130 ttcgagttggttcggttcattgtcagccctac 161  Q
     |||||||||||||||||||||||||||||||    
T  33438761 atcgagttggttcggttcattgtcagccctac 33438730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 11 - 152
Target Start/End: Original strand, 18074567 - 18074708
Alignment:
Q  11 atatatatctcatgttcatctcatttagttaatgaacttaattttccgctcaagttcagttcatttggttcataaatcaagttcaacgagataattatcg 110  Q
    ||||||| ||||  |||| ||||||||||||| ||||||||||||| | |||| ||||  |||||| |||||| || ||| ||||||||  ||||||||     
T  18074567 atatatagctcaatttcagctcatttagttaacgaacttaattttcagttcaaattcaactcatttagttcatgaaacaaattcaacgaattaattatca 18074666  T
Q  111 aatcgagtttcgaactattttcgagttggttcggttcattgt 152  Q
    |||||||| ||||||| | |||||||||| || |||||||||    
T  18074667 aatcgagtctcgaactctattcgagttggctcagttcattgt 18074708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 44 - 160
Target Start/End: Complemental strand, 54393559 - 54393443
Alignment:
Q  44 gaacttaattttccgctcaagttcagttcatttggttcataaatcaagttcaacgagataattatcgaatcgagtttcgaactattttcgagttggttcg 143  Q
    ||||||||||||| |||||||||| | |||||||||| || || ||||||||||||   |||| ||||||||| || |||||| |  |||||||||||||    
T  54393559 gaacttaattttcagctcaagttcggctcatttggtttatgaaccaagttcaacgaatcaattgtcgaatcgaattacgaactttaatcgagttggttcg 54393460  T
Q  144 gttcattgtcagcccta 160  Q
    |||||||| ||||||||    
T  54393459 gttcattgccagcccta 54393443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 30 - 160
Target Start/End: Complemental strand, 20550332 - 20550202
Alignment:
Q  30 ctcatttagttaatgaacttaattttccgctcaagttcagttcatttggttcataaatcaagttcaacgagataattatcgaatcgagtttcgaactatt 129  Q
    |||||||| |||| ||| |||||||||  |||| ||||   ||||||||||| | || |||||||||| |   |||||||||||||||| ||||||||||    
T  20550332 ctcatttatttaacgaatttaattttcaactcatgttcgactcatttggttcgtgaaccaagttcaacaaatcaattatcgaatcgagtatcgaactatt 20550233  T
Q  130 ttcgagttggttcggttcattgtcagcccta 160  Q
    |||||||||||| ||||||||| ||| ||||    
T  20550232 ttcgagttggtttggttcattgacaggccta 20550202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 33 - 159
Target Start/End: Complemental strand, 26049667 - 26049541
Alignment:
Q  33 atttagttaatgaacttaattttccgctcaagttcagttcatttggttcataaatcaagttcaacgagataattatcgaatcgagtttcgaactattttc 132  Q
    ||||| |||| || ||||||||||  |||||||||   ||||||| ||||| || ||||||||||  |  |||||||||||||| | || ||||||||||    
T  26049667 atttatttaacgagcttaattttcaactcaagttcgactcatttgattcatgaaccaagttcaacaggtcaattatcgaatcgaatctcaaactattttc 26049568  T
Q  133 gagttggttcggttcattgtcagccct 159  Q
    ||||||||||||||||||| |||||||    
T  26049567 gagttggttcggttcattgccagccct 26049541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 14 - 151
Target Start/End: Complemental strand, 39942946 - 39942809
Alignment:
Q  14 tatatctcatgttcatctcatttagttaatgaacttaattttccgctcaagttcagttcatttggttcataaatcaagttcaacgaga-taattatcgaa 112  Q
    |||| |||| ||||| ||||| || |||| ||||||||||||| |||||||||||| |||||  |||||| || |||||||||| ||| |||||  ||||    
T  39942946 tataactcaagttcagctcatctatttaacgaacttaattttcagctcaagttcagctcattaagttcatgaaccaagttcaac-agattaattgccgaa 39942848  T
Q  113 tcgagtttcgaactattttcgagttggttcggttcattg 151  Q
    |||| |||||||||||  |||||||||||| ||||||||    
T  39942847 tcgaatttcgaactatactcgagttggttcagttcattg 39942809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 103 - 160
Target Start/End: Complemental strand, 54432234 - 54432177
Alignment:
Q  103 aattatcgaatcgagtttcgaactattttcgagttggttcggttcattgtcagcccta 160  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||    
T  54432234 aattatcgaatcgagtatcgaactattttcgagttggttcggttcattgccagcccta 54432177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 50 - 150
Target Start/End: Original strand, 1674659 - 1674759
Alignment:
Q  50 aattttccgctcaagttcagttcatttggttcataaatcaagttcaacgagataattatcgaatcgagtttcgaactattttcgagttggttcggttcat 149  Q
    ||||||| ||| |||||||  ||||||||||||| || |||||||||| |||||||| | ||||||| ||  |||||||| |||||||||||||||||||    
T  1674659 aattttcagcttaagttcaactcatttggttcatgaaccaagttcaacaagataattgttgaatcgaattctgaactattgtcgagttggttcggttcat 1674758  T
Q  150 t 150  Q
    |    
T  1674759 t 1674759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 44 - 160
Target Start/End: Original strand, 30743596 - 30743712
Alignment:
Q  44 gaacttaattttccgctcaagttcagttcatttggttcataaatcaagttcaacgagataattatcgaatcgagtttcgaactattttcgagttggttcg 143  Q
    |||||||||| ||  ||||| ||||| ||||||||||||| || ||||||||||||| | ||  |||| ||||| | |||||||| ||||||||||||||    
T  30743596 gaacttaattctcaactcaaattcagctcatttggttcatgaaccaagttcaacgagttcatcttcgagtcgagctccgaactatattcgagttggttcg 30743695  T
Q  144 gttcattgtcagcccta 160  Q
    |||||||  ||||||||    
T  30743696 gttcatttccagcccta 30743712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 24 - 160
Target Start/End: Complemental strand, 46293349 - 46293213
Alignment:
Q  24 gttcatctcatttagttaatgaacttaattttccgctcaagttcagttcatttggttcataaatcaagttcaacgagataattatcgaatcgagtttcga 123  Q
    ||||| |||||||| |||| ||||||||||||| |||||||||| | ||||||||||||| || ||| |||||      |||| || | |||| ||| ||    
T  46293349 gttcaactcatttaattaacgaacttaattttcagctcaagttcggctcatttggttcatgaaccaaattcaattgaccaattgtcaagtcgaattttga 46293250  T
Q  124 actattttcgagttggttcggttcattgtcagcccta 160  Q
    ||||| ||||||||| |||||||||||||||||||||    
T  46293249 actatattcgagttgattcggttcattgtcagcccta 46293213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 59 - 161
Target Start/End: Complemental strand, 19560875 - 19560773
Alignment:
Q  59 ctcaagttcagttcatttggttcataaatcaagttcaacgagataattatcgaatcgagtttcgaactattttcgagttggttcggttcattgtcagccc 158  Q
    ||||||||||| |  ||| |||||| || ||||||||||||  ||||| |||| |||| || |||||||| |||||||||||||||||||||| ||||||    
T  19560875 ctcaagttcagcttgtttcgttcatgaaccaagttcaacgaattaattgtcgagtcgaattccgaactatattcgagttggttcggttcattgccagccc 19560776  T
Q  159 tac 161  Q
    |||    
T  19560775 tac 19560773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 19 - 151
Target Start/End: Original strand, 41609887 - 41610018
Alignment:
Q  19 ctcatgttcatctcatttagttaatgaacttaattttccgctcaagttcagttcatttggttcataaatcaagttcaacgagataattatcgaatcgagt 118  Q
    |||| ||||| |||||||| |||| ||||||||||||| |||||||| ||| || || ||||||| || |||||||||||   ||| |||||| |||| |    
T  41609887 ctcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaat 41609986  T
Q  119 ttcgaactattttcgagttggttcggttcattg 151  Q
     |||||||||  ||||||||| |||||||||||    
T  41609987 gtcgaactataatcgagttgg-tcggttcattg 41610018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 22 - 156
Target Start/End: Original strand, 26136335 - 26136469
Alignment:
Q  22 atgttcatctcatttagttaatgaacttaattttccgctcaagttcagttcatttggttcataaatcaagttcaacgagataattatcgaatcgagtttc 121  Q
    ||||||| |||||||  ||||  ||| |||||||   ||||||||| | ||| || ||||||||| |||||||||| |  |||||| |||||||||| ||    
T  26136335 atgttcaactcatttgtttaacaaacataattttgaactcaagttcggctcacttagttcataaaccaagttcaacaaactaattaacgaatcgagtctc 26136434  T
Q  122 gaactattttcgagttggttcggttcattgtcagc 156  Q
     ||||||| || |||||||| ||||||||||||||    
T  26136435 aaactattatcaagttggttgggttcattgtcagc 26136469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 24 - 158
Target Start/End: Complemental strand, 23206443 - 23206310
Alignment:
Q  24 gttcatctcatttagttaatgaacttaattttccgctcaagttcagttcatttggttcataaatcaagttcaacgagat-aattatcgaatcgagtttcg 122  Q
    ||||| |||||||| |||| ||||||||||||| |||||||| ||| || || ||||||| ||  ||||||||| |||| || |||| | |||| | |||    
T  23206443 gttcagctcatttaattaa-gaacttaattttcagctcaagtccagctcgttaggttcatgaacaaagttcaac-agattaaatatcaagtcgaatgtcg 23206346  T
Q  123 aactattttcgagttggttcggttcattgtcagccc 158  Q
    ||||||  ||||||||||||||||||||| ||||||    
T  23206345 aactataatcgagttggttcggttcattgccagccc 23206310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 30 - 161
Target Start/End: Original strand, 44574536 - 44574667
Alignment:
Q  30 ctcatttagttaatgaacttaattttccgctcaagttcagttcatttggttcataaatcaagttcaacgagataattatcgaatcgagtttcgaactatt 129  Q
    |||||||| | || |||||| |||||   ||||||||||| ||||| ||||||  ||  |||||||||||  |||||  ||| ||||| ||||||||||     
T  44574536 ctcatttaataaacgaacttgatttttaactcaagttcagctcattaggttcacgaactaagttcaacgaattaattgccgagtcgagcttcgaactata 44574635  T
Q  130 ttcgagttggttcggttcattgtcagccctac 161  Q
    |||||||||  ||||||||||| |||||||||    
T  44574636 ttcgagttgtctcggttcattgccagccctac 44574667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 30 - 156
Target Start/End: Complemental strand, 15822479 - 15822353
Alignment:
Q  30 ctcatttagttaatgaacttaattttccgctcaagttcagttcatttggttcataaatcaagttcaacgagataattatcgaatcgagtttcgaactatt 129  Q
    |||||||| || | || ||||||||||  |||||||||   ||| |||| |||| || |||||||||||| | ||||| |||||||| ||||||||||||    
T  15822479 ctcatttatttgacgagcttaattttcaactcaagttctactcaattggatcatgaaccaagttcaacgaaacaattaccgaatcgaatttcgaactatt 15822380  T
Q  130 ttcgagttggttcggttcattgtcagc 156  Q
    ||||| |||| | | ||| ||||||||    
T  15822379 ttcgaattggattgattcgttgtcagc 15822353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 11 - 163
Target Start/End: Original strand, 5418669 - 5418821
Alignment:
Q  11 atatatatctcatgttcatctcatttagttaatgaacttaattttccgctcaagttcagttcatttggttcataaatcaagttcaacgagataattatcg 110  Q
    ||||||| |||| ||||| ||||||||||||| ||||||||| ||  ||||||||||   || |||||||||| ||  ||||||||| |  ||||||       
T  5418669 atatataactcaagttcaactcatttagttaacgaacttaatctttagctcaagttcgactcgtttggttcatgaactaagttcaacaaactaattactt 5418768  T
Q  111 aatcgagtttcgaactattttcgagttggttcggttcattgtcagccctacat 163  Q
    | ||||||| |||||| | |||||||||  ||| ||||||| || ||||||||    
T  5418769 agtcgagttccgaactttattcgagttgtatcgattcattgccaaccctacat 5418821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 73 - 141
Target Start/End: Complemental strand, 48730924 - 48730856
Alignment:
Q  73 atttggttcataaatcaagttcaacgagataattatcgaatcgagtttcgaactattttcgagttggtt 141  Q
    ||||||||||| ||||||||| |||||  |||||| | |||||| | ||||||||||||||||||||||    
T  48730924 atttggttcatgaatcaagtttaacgaattaattagcaaatcgaatctcgaactattttcgagttggtt 48730856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 34 - 151
Target Start/End: Original strand, 28687086 - 28687203
Alignment:
Q  34 tttagttaatgaacttaattttccgctcaagttcagttcatttggttcataaatcaagttcaacgagataattatcgaatcgagtttcgaactattttcg 133  Q
    |||| |||| ||||||||||||| |||||| || ||  | | |||||||| || |||||||||| ||  |||||| || ||||||| ||||| || ||||    
T  28687086 tttatttaacgaacttaattttcagctcaaatttagcccgtctggttcatgaaccaagttcaacaagcaaattattgagtcgagttccgaaccatattcg 28687185  T
Q  134 agttggttcggttcattg 151  Q
    | |||||||| |||||||    
T  28687186 atttggttcgcttcattg 28687203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 45 - 159
Target Start/End: Complemental strand, 55203182 - 55203066
Alignment:
Q  45 aacttaattttccgctcaagttcagttcatttggttcataaatcaagttcaacgagataattatcgaatcgagtttcgaa--ctattttcgagttggttc 142  Q
    |||||||||||   || |||||||| ||||||| ||||  |||||| ||||||||  ||||| ||||||||||||  |||   |||| |||| || ||||    
T  55203182 aacttaatttttaacttaagttcagctcatttgtttcaagaatcaaattcaacgaattaattgtcgaatcgagttctgaattatattgtcgaattagttc 55203083  T
Q  143 ggttcattgtcagccct 159  Q
    |||||||||||||||||    
T  55203082 ggttcattgtcagccct 55203066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 59 - 150
Target Start/End: Original strand, 33896829 - 33896920
Alignment:
Q  59 ctcaagttcagttcatttggttcataaatcaagttcaacgagataattatcgaatcgagtttcgaactattttcgagttggttcggttcatt 150  Q
    ||||||||||| |||||||||||| ||||||| ||||||||| | ||| || | || |  | |||||||| ||||| ||| |||||||||||    
T  33896829 ctcaagttcagctcatttggttcacaaatcaaattcaacgagttcattgtcaagtcaaactccgaactatattcgaattgattcggttcatt 33896920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 11 - 108
Target Start/End: Original strand, 50965394 - 50965492
Alignment:
Q  11 atatatatctcatgttcatctcatttagttaatgaacttaa-ttttccgctcaagttcagttcatttggttcataaatcaagttcaacgagataattat 108  Q
    ||||||| |||| ||||| |||||||| |||| |||||||| ||||| |||||| ||||| ||||| ||||||| || ||| || |||||  |||||||    
T  50965394 atatatagctcaagttcagctcatttatttaacgaacttaatttttcagctcaaattcagctcattaggttcatgaaccaaatttaacgaactaattat 50965492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 11 - 108
Target Start/End: Original strand, 51068529 - 51068627
Alignment:
Q  11 atatatatctcatgttcatctcatttagttaatgaacttaa-ttttccgctcaagttcagttcatttggttcataaatcaagttcaacgagataattat 108  Q
    ||||||| |||| ||||| |||||||| |||| |||||||| ||||| |||||| ||||| ||||| ||||||| || ||| || |||||  |||||||    
T  51068529 atatatagctcaagttcagctcatttatttaacgaacttaatttttcagctcaaattcagctcattaggttcatgaaccaaatttaacgaactaattat 51068627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 77
Target Start/End: Original strand, 52199388 - 52199446
Alignment:
Q  19 ctcatgttcatctcatttagttaatgaacttaattttccgctcaagttcagttcatttg 77  Q
    |||| ||||| |||||||  |||| ||||||||||||| |||||||||||| |||||||    
T  52199388 ctcaagttcagctcatttgtttaacgaacttaattttcagctcaagttcagctcatttg 52199446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 83; Significance: 2e-39; HSPs: 23)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 30 - 160
Target Start/End: Original strand, 1501858 - 1501988
Alignment:
Q  30 ctcatttagttaatgaacttaattttccgctcaagttcagttcatttggttcataaatcaagttcaacgagataattatcgaatcgagtttcgaactatt 129  Q
    |||||||| |||| ||||||||||||| |||||||||| ||||||||||||||| ||  |||||||||||| ||||| || ||||||||||||||| |||    
T  1501858 ctcatttatttaacgaacttaattttcagctcaagttcggttcatttggttcatgaacgaagttcaacgagttaattgtcaaatcgagtttcgaacaatt 1501957  T
Q  130 ttcgagttggttcggttcattgtcagcccta 160  Q
     ||||||||||||||||||||||||||||||    
T  1501958 gtcgagttggttcggttcattgtcagcccta 1501988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 24 - 160
Target Start/End: Complemental strand, 4441437 - 4441301
Alignment:
Q  24 gttcatctcatttagttaatgaacttaattttccgctcaagttcagttcatttggttcataaatcaagttcaacgagataattatcgaatcgagtttcga 123  Q
    ||||| |||||||| |||| |||||||||||||  ||||||||||| |||||| |||| | || ||||||||||||| ||||| ||||||||||||||||    
T  4441437 gttcagctcatttatttaacgaacttaattttcaactcaagttcagctcatttagttcgtgaaccaagttcaacgagctaattgtcgaatcgagtttcga 4441338  T
Q  124 actattttcgagttggttcggttcattgtcagcccta 160  Q
    |||||| ||||||||||||||||||||| | ||||||    
T  4441337 actattgtcgagttggttcggttcattgccggcccta 4441301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 24 - 161
Target Start/End: Complemental strand, 3081854 - 3081717
Alignment:
Q  24 gttcatctcatttagttaatgaacttaattttccgctcaagttcagttcatttggttcataaatcaagttcaacgagataattatcgaatcgagtttcga 123  Q
    ||||| |||||||| |||| || ||||||||||  |||||||||   ||||||||||| | || ||||||||||||   |||||||||||||||| ||||    
T  3081854 gttcagctcatttaattaacgagcttaattttcaactcaagttcgactcatttggttcgtgaaccaagttcaacgaaccaattatcgaatcgagtatcga 3081755  T
Q  124 actattttcgagttggttcggttcattgtcagccctac 161  Q
    |||||||||||| ||||||||||||||| |||||||||    
T  3081754 actattttcgagctggttcggttcattgccagccctac 3081717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 11 - 162
Target Start/End: Complemental strand, 5640401 - 5640250
Alignment:
Q  11 atatatatctcatgttcatctcatttagttaatgaacttaattttccgctcaagttcagttcatttggttcataaatcaagttcaacgagataattatcg 110  Q
    |||||||  ||| ||||| |||| |||||| | ||||||||||||| | |||||||| | ||||||||||||| || ||||||| ||||   ||||||||    
T  5640401 atatatagttcaagttcagctcaattagttgacgaacttaattttcagttcaagttcggctcatttggttcatgaaccaagttcgacgaatcaattatcg 5640302  T
Q  111 aatcgagtttcgaactattttcgagttggttcggttcattgtcagccctaca 162  Q
    |||||| || |||||| |  ||||||||||||||||||||| ||||||||||    
T  5640301 aatcgaattacgaactctaatcgagttggttcggttcattgccagccctaca 5640250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 45 - 160
Target Start/End: Original strand, 6999292 - 6999407
Alignment:
Q  45 aacttaattttccgctcaagttcagttcatttggttcataaatcaagttcaacgagataattatcgaatcgagtttcgaactattttcgagttggttcgg 144  Q
    |||||||||||| |||||||||||| |||||| |||||| || ||||||||||||  ||||||||||||||||| || ||||||| |||||||| ||||     
T  6999292 aacttaattttcagctcaagttcagctcatttagttcattaaccaagttcaacgaattaattatcgaatcgagtctcaaactattgtcgagttgcttcga 6999391  T
Q  145 ttcattgtcagcccta 160  Q
    || |||||| ||||||    
T  6999392 tttattgtctgcccta 6999407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 24 - 160
Target Start/End: Original strand, 13312026 - 13312164
Alignment:
Q  24 gttcatctcatttagttaatgaacttaattttccgctcaagttcagttcatttggttcataaatcaagttcaacgagataattatcgaatcgagttt--c 121  Q
    ||||| |||||||| |||| |||||||||||||  |||||||||   ||||||||||||| || ||||| ||| ||   |||||||||||||||| |  |    
T  13312026 gttcaactcatttatttaacgaacttaattttcaactcaagttcgactcatttggttcatgaaccaagtccaatgaaccaattatcgaatcgagtatatc 13312125  T
Q  122 gaactattttcgagttggttcggttcattgtcagcccta 160  Q
    |||||||||||||||||||||||||||||| ||||||||    
T  13312126 gaactattttcgagttggttcggttcattgccagcccta 13312164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 30 - 165
Target Start/End: Original strand, 17441168 - 17441303
Alignment:
Q  30 ctcatttagttaatgaacttaattttccgctcaagttcagttcatttggttcataaatcaagttcaacgagataattatcgaatcgagtttcgaactatt 129  Q
    |||||||| || | || ||||||||||  ||||||||||  ||||||||||||| ||  |||||||||||  |||||| | |||||||||||||||||||    
T  17441168 ctcatttatttgacgagcttaattttcaactcaagttcaactcatttggttcatgaactaagttcaacgaattaattaccaaatcgagtttcgaactatt 17441267  T
Q  130 ttcgagttggttcggttcattgtcagccctacataa 165  Q
    |||| ||||||||||||||||| || ||||| ||||    
T  17441268 ttcgggttggttcggttcattgccaaccctagataa 17441303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 24 - 160
Target Start/End: Original strand, 7437308 - 7437444
Alignment:
Q  24 gttcatctcatttagttaatgaacttaattttccgctcaagttcagttcatttggttcataaatcaagttcaacgagataattatcgaatcgagtttcga 123  Q
    ||||| |||||||| |||| || ||||||||||  || ||||||   ||||||||||| | || ||||||||||||    ||||||||||||||| ||||    
T  7437308 gttcagctcatttatttaacgagcttaattttcaactaaagttcgactcatttggttcgtgaaccaagttcaacgaacccattatcgaatcgagtatcga 7437407  T
Q  124 actattttcgagttggttcggttcattgtcagcccta 160  Q
    |||||||||||||| ||||||||||||  ||||||||    
T  7437408 actattttcgagttagttcggttcattaccagcccta 7437444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 11 - 157
Target Start/End: Original strand, 33110449 - 33110595
Alignment:
Q  11 atatatatctcatgttcatctcatttagttaatgaacttaattttccgctcaagttcagttcatttggttcataaatcaagttcaacgagataattatcg 110  Q
    ||||||| |||| ||||  ||||||||||||| ||||||||| ||  ||| |||||| | || |||||||||| || ||||||||||||  |||||| ||    
T  33110449 atatataactcaagttcgactcatttagttaacgaacttaatctttagcttaagttcggctcgtttggttcatgaaccaagttcaacgaactaattaccg 33110548  T
Q  111 aatcgagtttcgaactattttcgagttggttcggttcattgtcagcc 157  Q
    | ||||||| |||||| | |||||||||  ||||||||||| |||||    
T  33110549 agtcgagttccgaactttattcgagttgtatcggttcattgccagcc 33110595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 19 - 154
Target Start/End: Original strand, 18095518 - 18095653
Alignment:
Q  19 ctcatgttcatctcatttagttaatgaacttaattttccgctcaagttcagttcatttggttcataaatcaagttcaacgagataattatcgaatcgagt 118  Q
    |||| |||||||||||||| |||| ||||||||||||   |||||||||   | ||||||||| | || ||||||||||||    |||||||||||||||    
T  18095518 ctcaagttcatctcatttatttaacgaacttaatttttaactcaagttcgacttatttggttcgtgaaccaagttcaacgaatccattatcgaatcgagt 18095617  T
Q  119 ttcgaactattttcgagttggttcggttcattgtca 154  Q
     || |||| |||| ||||||||| ||||||||||||    
T  18095618 ctcaaactttttttgagttggtttggttcattgtca 18095653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 19 - 154
Target Start/End: Original strand, 18099815 - 18099950
Alignment:
Q  19 ctcatgttcatctcatttagttaatgaacttaattttccgctcaagttcagttcatttggttcataaatcaagttcaacgagataattatcgaatcgagt 118  Q
    |||| |||||||||||||| |||| |||||||||| |   ||||| |||   ||||||||||| | || ||||||||||||    |||||||||||||||    
T  18099815 ctcaagttcatctcatttatttaacgaacttaattgttaactcaaattcgactcatttggttcgtgaaccaagttcaacgaatccattatcgaatcgagt 18099914  T
Q  119 ttcgaactattttcgagttggttcggttcattgtca 154  Q
     || |||| |||||||||||||| ||||||||||||    
T  18099915 ctcaaacttttttcgagttggtttggttcattgtca 18099950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 24 - 160
Target Start/End: Complemental strand, 10961932 - 10961796
Alignment:
Q  24 gttcatctcatttagttaatgaacttaattttccgctcaagttcagttcatttggttcataaatcaagttcaacgagataattatcgaatcgagtttcga 123  Q
    ||||| |||| |||||| | ||||||||||||| |||||| |||   ||||||||||||| || ||||||||||||   |||| ||||||| | || | |    
T  10961932 gttcagctcaattagttgacgaacttaattttcagctcaaattcgactcatttggttcatgaaccaagttcaacgaatcaattgtcgaatcaaattacaa 10961833  T
Q  124 actattttcgagttggttcggttcattgtcagcccta 160  Q
    ||| |  ||||||||||||||||||||| ||||||||    
T  10961832 actttaatcgagttggttcggttcattgccagcccta 10961796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 72 - 160
Target Start/End: Complemental strand, 11460102 - 11460014
Alignment:
Q  72 catttggttcataaatcaagttcaacgagataattatcgaatcgagtttcgaactattttcgagttggttcggttcattgtcagcccta 160  Q
    |||||||||||| || ||||||||||||   ||||||||||||||||| ||||||||| | ||||||| ||||||||||| || |||||    
T  11460102 catttggttcatgaaccaagttcaacgaatcaattatcgaatcgagttccgaactattattgagttggatcggttcattgccaacccta 11460014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 19 - 160
Target Start/End: Original strand, 10346720 - 10346861
Alignment:
Q  19 ctcatgttcatctcatttagttaatgaacttaattttccgctcaagttcagttcatttggttcataaatcaagttcaacgagataattatcgaatcgagt 118  Q
    |||| ||||| |||||||| |||| ||||||||||||| |||||||| ||| || || ||||||| || |||||||||||   ||  ||| || |||| |    
T  10346720 ctcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattagatatagagtcgaat 10346819  T
Q  119 ttcgaactattttcgagttggttcggttcattgtcagcccta 160  Q
     |||||||||  |||| |||||| ||||||||| ||||||||    
T  10346820 gtcgaactataatcgatttggtttggttcattgccagcccta 10346861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 77 - 160
Target Start/End: Original strand, 8200688 - 8200771
Alignment:
Q  77 ggttcataaatcaagttcaacgagataattatcgaatcgagtttcgaactattttcgagttggttcggttcattgtcagcccta 160  Q
    ||||||| ||||||||||||||   ||| |||||| |||| | |||||||||  ||||||||||| ||||||||||||||||||    
T  8200688 ggttcatgaatcaagttcaacggattaaatatcgagtcgaatgtcgaactataatcgagttggtttggttcattgtcagcccta 8200771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 65 - 151
Target Start/End: Original strand, 12428921 - 12429007
Alignment:
Q  65 ttcagttcatttggttcataaatcaagttcaacgagataattatcgaatcgagtttcgaactattttcgagttggttcggttcattg 151  Q
    ||||| ||| |||||||||||| |||||||||| || | ||| |||| |||||||  ||||||| || |||||||||||||||||||    
T  12428921 ttcagctcagttggttcataaaccaagttcaacaagttcattgtcgagtcgagttctgaactatatttgagttggttcggttcattg 12429007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 69 - 138
Target Start/End: Complemental strand, 8596927 - 8596858
Alignment:
Q  69 gttcatttggttcataaatcaagttcaacgagataattatcgaatcgagtttcgaactattttcgagttg 138  Q
    |||||||| |||||| |||||| ||| ||||| ||||| |||| |||||||||||||||| |||||||||    
T  8596927 gttcatttagttcatgaatcaaattcgacgagttaattgtcgagtcgagtttcgaactatattcgagttg 8596858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 30 - 114
Target Start/End: Original strand, 32163551 - 32163635
Alignment:
Q  30 ctcatttagttaatgaacttaattttccgctcaagttcagttcatttggttcataaatcaagttcaacgagataattatcgaatc 114  Q
    ||||||||||||| |||||||||||||  |||||||| || ||||| ||||||| || || ||||||| || ||||| |||||||    
T  32163551 ctcatttagttaacgaacttaattttcaactcaagtttagctcattaggttcatgaaccatgttcaaccagttaattgtcgaatc 32163635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 44 - 151
Target Start/End: Complemental strand, 9463470 - 9463363
Alignment:
Q  44 gaacttaattttccgctcaagttcagttcatttggttcataaatcaagttcaacgagataattatcgaatcgagtttcgaactattttcgagttggttcg 143  Q
    ||||||||||||  | | || ||||| ||||||||||||||||  ||||| || ||| |||||||||| ||||||| |||||| | ||||||| |  |||    
T  9463470 gaacttaatttttagtttaaattcagctcatttggttcataaactaagtttaatgagttaattatcgagtcgagttccgaactttattcgagtagtctcg 9463371  T
Q  144 gttcattg 151  Q
    ||||||||    
T  9463370 gttcattg 9463363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 13 - 94
Target Start/End: Complemental strand, 9950907 - 9950826
Alignment:
Q  13 atatatctcatgttcatctcatttagttaatgaacttaattttccgctcaagttcagttcatttggttcataaatcaagttc 94  Q
    ||||| |||| ||||| |||| |||||| | |||||||||||||  ||||||||| | ||||||||||||| || |||||||    
T  9950907 atatagctcaagttcagctcaattagttgacgaacttaattttcaactcaagttcggctcatttggttcatgaaccaagttc 9950826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 45 - 121
Target Start/End: Complemental strand, 17507384 - 17507308
Alignment:
Q  45 aacttaattttccgctcaagttcagttcatttggttcataaatcaagttcaacgagataattatcgaatcgagtttc 121  Q
    |||||||||||| |||||| || || ||||||  ||||| |||||| |||||| || |||||||| |||||||||||    
T  17507384 aacttaattttcagctcaaattgagctcatttaattcatgaatcaaattcaacaagttaattatcaaatcgagtttc 17507308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 24 - 99
Target Start/End: Complemental strand, 27985026 - 27984951
Alignment:
Q  24 gttcatctcatttagttaatgaacttaattttccgctcaagttcagttcatttggttcataaatcaagttcaacga 99  Q
    ||||| |||| |||||| |  |||||||||||| | |||||||| | |||||||||||||||| ||||||| ||||    
T  27985026 gttcagctcaattagtttacaaacttaattttcagttcaagttcggctcatttggttcataaaccaagttcgacga 27984951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 11 - 163
Target Start/End: Original strand, 22295907 - 22296059
Alignment:
Q  11 atatatatctcatgttcatctcatttagttaatgaacttaattttccgctcaagttcagttcatttggttcataaatcaagttcaacgagataattatcg 110  Q
    ||||||| ||||  |||| | |||||| |||| ||||||||| ||  |||||||||| | || |||||||||| || |||||| ||  |  ||||||  |    
T  22295907 atatataactcaaattcaacacatttacttaacgaacttaatctttagctcaagttcggctcgtttggttcatgaaccaagtttaataaactaattactg 22296006  T
Q  111 aatcgagtttcgaactattttcgagttggttcggttcattgtcagccctacat 163  Q
    | ||||||| |||||| | ||| |||||  | ||||||||| |||||||||||    
T  22296007 agtcgagttccgaactttattcaagttgtcttggttcattggcagccctacat 22296059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 78; Significance: 2e-36; HSPs: 42)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 11 - 160
Target Start/End: Complemental strand, 1840836 - 1840687
Alignment:
Q  11 atatatatctcatgttcatctcatttagttaatgaacttaattttccgctcaagttcagttcatttggttcataaatcaagttcaacgagataattatcg 110  Q
    ||||| |||||| ||||| |||||||| || | ||||||||||||| |||||||||||| ||||||||||||| || ||||||||||||| ||||| |||    
T  1840836 atatacatctcaagttcagctcatttatttcacgaacttaattttcagctcaagttcagctcatttggttcatgaaccaagttcaacgagttaattgtcg 1840737  T
Q  111 aatcgagtttcgaactattttcgagttggttcggttcattgtcagcccta 160  Q
    ||| |||||  |||||||| ||||||||||||||||||||| || |||||    
T  1840736 aattgagttctgaactattgtcgagttggttcggttcattgccaacccta 1840687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 25 - 160
Target Start/End: Original strand, 31021868 - 31022003
Alignment:
Q  25 ttcatctcatttagttaatgaacttaattttccgctcaagttcagttcatttggttcataaatcaagttcaacgagataattatcgaatcgagtttcgaa 124  Q
    |||| |||||||||||||  ||||||||||   |||||| ||||| ||||||||||||| || |||  |||||||| |||||||||| ||||||| ||||    
T  31021868 ttcagctcatttagttaacaaacttaatttcaagctcaaattcagctcatttggttcatgaaccaaactcaacgagttaattatcgagtcgagttccgaa 31021967  T
Q  125 ctattttcgagttggttcggttcattgtcagcccta 160  Q
    |||| |||||||||||||||||||||||||| ||||    
T  31021968 ctatattcgagttggttcggttcattgtcagtccta 31022003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 13 - 160
Target Start/End: Original strand, 41783318 - 41783465
Alignment:
Q  13 atatatctcatgttcatctcatttagttaatgaacttaattttccgctcaagttcagttcatttggttcataaatcaagttcaacgagataattatcgaa 112  Q
    ||||| |||| ||||| ||||||||||||| ||||||||| ||  |||||||||| | ||||||||||||| || ||||||||||||  |||||| |||     
T  41783318 atataactcaagttcaactcatttagttaacgaacttaatctttagctcaagttcggctcatttggttcatgaaccaagttcaacgaactaattaccgag 41783417  T
Q  113 tcgagtttcgaactattttcgagttggttcggttcattgtcagcccta 160  Q
    ||||||| |||||| | |||||||||  ||||||||||||||||||||    
T  41783418 tcgagttccgaactttattcgagttgtatcggttcattgtcagcccta 41783465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 24 - 161
Target Start/End: Complemental strand, 3801500 - 3801363
Alignment:
Q  24 gttcatctcatttagttaatgaacttaattttccgctcaagttcagttcatttggttcataaatcaagttcaacgagataattatcgaatcgagtttcga 123  Q
    ||||| |||||||| |||| ||||||||||||| |||||||||| | ||||||||||||| || ||||||||| ||   |||| |||| |||| || |||    
T  3801500 gttcaactcatttaattaacgaacttaattttcagctcaagttcggctcatttggttcatgaaccaagttcaatgaaccaattgtcgagtcgaattacga 3801401  T
Q  124 actattttcgagttggttcggttcattgtcagccctac 161  Q
    ||||| |||||||||||||||||||||| |||||||||    
T  3801400 actatattcgagttggttcggttcattgccagccctac 3801363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 24 - 155
Target Start/End: Complemental strand, 19282250 - 19282119
Alignment:
Q  24 gttcatctcatttagttaatgaacttaattttccgctcaagttcagttcatttggttcataaatcaagttcaacgagataattatcgaatcgagtttcga 123  Q
    ||||| ||||| || |||| |||| |||||||| |||||||||||| ||||||||||||| || ||||||||||||| ||||| ||||||  |||| |||    
T  19282250 gttcagctcatctacttaacgaacctaattttcagctcaagttcagctcatttggttcatgaaccaagttcaacgagttaattgtcgaatgaagttccga 19282151  T
Q  124 actattttcgagttggttcggttcattgtcag 155  Q
    |||||| |||||||||||| | ||||||||||    
T  19282150 actattatcgagttggttcagctcattgtcag 19282119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 70 - 160
Target Start/End: Original strand, 10327980 - 10328070
Alignment:
Q  70 ttcatttggttcataaatcaagttcaacgagataattatcgaatcgagtttcgaactattttcgagttggttcggttcattgtcagcccta 160  Q
    |||||||||||||| |||||||||||||||   ||||| |||||||||||| |||| ||||||||||||||||||||||||||||||||||    
T  10327980 ttcatttggttcatgaatcaagttcaacgaatcaattaccgaatcgagttttgaacaattttcgagttggttcggttcattgtcagcccta 10328070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 47 - 161
Target Start/End: Original strand, 27196104 - 27196218
Alignment:
Q  47 cttaattttccgctcaagttcagttcatttggttcataaatcaagttcaacgagataattatcgaatcgagtttcgaactattttcgagttggttcggtt 146  Q
    ||||||||||  |||||||||   ||||||||||||| || ||| || |||||   |||||||||||||||| |||||||||||||||||||||||||||    
T  27196104 cttaattttcaactcaagttcgactcatttggttcatgaaccaaatttaacgaatcaattatcgaatcgagtctcgaactattttcgagttggttcggtt 27196203  T
Q  147 cattgtcagccctac 161  Q
    |||||||||||||||    
T  27196204 cattgtcagccctac 27196218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 30 - 160
Target Start/End: Complemental strand, 32945151 - 32945021
Alignment:
Q  30 ctcatttagttaatgaacttaattttccgctcaagttcagttcatttggttcataaatcaagttcaacgagataattatcgaatcgagtttcgaactatt 129  Q
    |||||||| || | || |||||||||   |||||||||   ||||||||||||| || |||||| |||||   ||||| |||||||||||||||||||||    
T  32945151 ctcatttatttgacgagcttaatttttgactcaagttcgactcatttggttcatgaaccaagtttaacgaatcaattaccgaatcgagtttcgaactatt 32945052  T
Q  130 ttcgagttggttcggttcattgtcagcccta 160  Q
    |||||||||||||||||||||||||||||||    
T  32945051 ttcgagttggttcggttcattgtcagcccta 32945021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 24 - 164
Target Start/End: Complemental strand, 38522997 - 38522857
Alignment:
Q  24 gttcatctcatttagttaatgaacttaattttccgctcaagttcagttcatttggttcataaatcaagttcaacgagataattatcgaatcgagtttcga 123  Q
    ||||| |||||||| |||| ||||||||||||| |||||||||  | ||||||||||||| || ||||||||| |    ||||||||| || | || |||    
T  38522997 gttcagctcatttaattaacgaacttaattttcagctcaagtttggctcatttggttcatgaaccaagttcaatggaccaattatcgagtcaaattacga 38522898  T
Q  124 actattttcgagttggttcggttcattgtcagccctacata 164  Q
    ||||| |||||||||||||||||||||| ||||||||||||    
T  38522897 actatattcgagttggttcggttcattgccagccctacata 38522857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 11 - 157
Target Start/End: Original strand, 39414172 - 39414319
Alignment:
Q  11 atatatatctcatgttcatctcatttagttaatgaacttaattttccgc-tcaagttcagttcatttggttcataaatcaagttcaacgagataattatc 109  Q
    ||||||| |||| ||||| |||||||| |||| ||||||||||||   | | |||||||| ||||| |||||||  | ||||||||||||| ||||| ||    
T  39414172 atatataactcaagttcagctcatttatttaacgaacttaatttttaacttaaagttcagctcattaggttcatggaccaagttcaacgagttaattgtc 39414271  T
Q  110 gaatcgagtttcgaactattttcgagttggttcggttcattgtcagcc 157  Q
    ||||  |||||||||||||| |||||||||||||||||||| ||||||    
T  39414272 gaattaagtttcgaactattgtcgagttggttcggttcattttcagcc 39414319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 24 - 160
Target Start/End: Complemental strand, 27450717 - 27450581
Alignment:
Q  24 gttcatctcatttagttaatgaacttaattttccgctcaagttcagttcatttggttcataaatcaagttcaacgagataattatcgaatcgagtttcga 123  Q
    ||||| |||||||| |||| || |||||||||   |||||||||   ||||| ||||||| |||||| ||||||||   |||||||||||||| | |||     
T  27450717 gttcaactcatttatttaacgagcttaattttaaactcaagttcgactcattaggttcatgaatcaaattcaacgaatcaattatcgaatcgaatctcgc 27450618  T
Q  124 actattttcgagttggttcggttcattgtcagcccta 160  Q
    |||||||||||||||||||||||||||| ||||||||    
T  27450617 actattttcgagttggttcggttcattgccagcccta 27450581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 19 - 163
Target Start/End: Original strand, 31620867 - 31621011
Alignment:
Q  19 ctcatgttcatctcatttagttaatgaacttaattttccgctcaagttcagttcatttggttcataaatcaagttcaacgagataattatcgaatcgagt 118  Q
    |||| ||||| |||||||| |||| ||||||||| ||| ||| |||||||  ||||| ||||||| || ||| ||||| |   ||||| |||| |||| |    
T  31620867 ctcaagttcagctcatttaattaacgaacttaatattcagctgaagttcaactcattaggttcatgaaccaaattcaatggactaattgtcgagtcgaat 31620966  T
Q  119 ttcgaactattttcgagttggttcggttcattgtcagccctacat 163  Q
    |||||||||| ||| ||||||||||||||||||||||||||||||    
T  31620967 ttcgaactatattcaagttggttcggttcattgtcagccctacat 31621011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 11 - 150
Target Start/End: Complemental strand, 14500855 - 14500716
Alignment:
Q  11 atatatatctcatgttcatctcatttagttaatgaacttaattttccgctcaagttcagttcatttggttcataaatcaagttcaacgagataattatcg 110  Q
    ||||||| |||| ||||| |||||| |||||| ||||||||| ||  |||||||||| | || |||||||||| || ||||||||||||  |||||||||    
T  14500855 atatataactcaagttcaactcattcagttaacgaacttaatctttagctcaagttcggctcgtttggttcatgaaccaagttcaacgaactaattatcg 14500756  T
Q  111 aatcgagtttcgaactattttcgagttggttcggttcatt 150  Q
    | ||||||| |||||| | |||||||||  ||||||||||    
T  14500755 agtcgagttccgaactgtattcgagttgtatcggttcatt 14500716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 74 - 160
Target Start/End: Complemental strand, 5382911 - 5382825
Alignment:
Q  74 tttggttcataaatcaagttcaacgagataattatcgaatcgagtttcgaactattttcgagttggttcggttcattgtcagcccta 160  Q
    |||||||||| |||||||||||||||  |||||| |||||||||| ||||||| ||||| ||||||||| |||||||||||||||||    
T  5382911 tttggttcatgaatcaagttcaacgaattaattaccgaatcgagtctcgaactcttttcaagttggttcagttcattgtcagcccta 5382825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 11 - 161
Target Start/End: Original strand, 26218038 - 26218188
Alignment:
Q  11 atatatatctcatgttcatctcatttagttaatgaacttaattttccgctcaagttcagttcatttggttcataaatcaagttcaacgagataattatcg 110  Q
    ||||||| |||| ||| | ||||||||||||| ||||||||| ||  |||||||||| | || |||||||||| || ||||||||||||  |||||| ||    
T  26218038 atatataactcaagtttaactcatttagttaacgaacttaatctttagctcaagttcggctcgtttggttcatgaaccaagttcaacgaactaattaccg 26218137  T
Q  111 aatcgagtttcgaactattttcgagttggttcggttcattgtcagccctac 161  Q
    | ||||||| |||||| | || ||||||  ||||||||||| |||||||||    
T  26218138 agtcgagttccgaactttatttgagttgtatcggttcattgccagccctac 26218188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 19 - 160
Target Start/End: Original strand, 27906097 - 27906238
Alignment:
Q  19 ctcatgttcatctcatttagttaatgaacttaattttccgctcaagttcagttcatttggttcataaatcaagttcaacgagataattatcgaatcgagt 118  Q
    |||| ||||| |||||||| |||| ||||||||||||| |||||||| ||| || || ||||||| || |||||||||||   ||  |||||| |||| |    
T  27906097 ctcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattagatatcgagtcgaat 27906196  T
Q  119 ttcgaactattttcgagttggttcggttcattgtcagcccta 160  Q
     |||||||||  ||||||||||||||||||||| ||||||||    
T  27906197 gtcgaactataatcgagttggttcggttcattgccagcccta 27906238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 13 - 161
Target Start/End: Original strand, 20188966 - 20189114
Alignment:
Q  13 atatatctcatgttcatctcatttagttaatgaacttaattttccgctcaagttcagttcatttggttcataaatcaagttcaacgagataattatcgaa 112  Q
    ||||| |||| ||||| |||| |||||| | ||||||||||||  | |||||||| | ||||||||||||| || ||||||| ||||   ||||||||||    
T  20188966 atatagctcaagttcagctcaattagttgacgaacttaatttttagttcaagttcggctcatttggttcatgaaccaagttcgacgaatcaattatcgaa 20189065  T
Q  113 tcgagtttcgaactattttcgagttggttcggttcattgtcagccctac 161  Q
    || | || |||||| |  |||||||| ||||||||||||||||||||||    
T  20189066 tcaaattacgaactctaatcgagttgattcggttcattgtcagccctac 20189114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 24 - 160
Target Start/End: Original strand, 39407410 - 39407546
Alignment:
Q  24 gttcatctcatttagttaatgaacttaattttccgctcaagttcagttcatttggttcataaatcaagttcaacgagataattatcgaatcgagtttcga 123  Q
    ||||| |||||||| |||| || |||||||||   |||||||||   ||||| ||||||| |||||||||||||||   |||||||||||||| | |||     
T  39407410 gttcaactcatttatttaacgagcttaattttaaactcaagttcgactcattaggttcatgaatcaagttcaacgaatcaattatcgaatcgaatctcgc 39407509  T
Q  124 actattttcgagttggttcggttcattgtcagcccta 160  Q
    |||||||| ||||||||||||||||||  ||||||||    
T  39407510 actatttttgagttggttcggttcattaccagcccta 39407546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 30 - 160
Target Start/End: Original strand, 29328054 - 29328183
Alignment:
Q  30 ctcatttagttaatgaacttaattttccgctcaagttcagttcatttggttcataaatcaagttcaacgagataattatcgaatcgagtttcgaactatt 129  Q
    |||||||| |||| ||||||||||||| |||||||| ||| |  || ||||||| ||||||||||||||   ||| |||||| |||| | |||||||||     
T  29328054 ctcatttaattaacgaacttaattttcagctcaagtccagctg-ttaggttcatgaatcaagttcaacggattaaatatcgagtcgaatgtcgaactata 29328152  T
Q  130 ttcgagttggttcggttcattgtcagcccta 160  Q
     ||||||| ||||||||||||||||||||||    
T  29328153 atcgagtttgttcggttcattgtcagcccta 29328183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 19 - 156
Target Start/End: Original strand, 18880191 - 18880328
Alignment:
Q  19 ctcatgttcatctcatttagttaatgaacttaattttccgctcaagttcagttcatttggttcataaatcaagttcaacgagataattatcgaatcgagt 118  Q
    |||| ||||| |||||||| |||| ||||||||||||| ||| |||| ||| || || ||||||| || |||||||||||   ||  |||||| |||| |    
T  18880191 ctcaagttcagctcatttaattaacgaacttaattttcagcttaagtccagctcgttaggttcatgaaccaagttcaacggattagatatcgagtcgaat 18880290  T
Q  119 ttcgaactattttcgagttggttcggttcattgtcagc 156  Q
     |||||||||  ||||||||||||||||||||||||||    
T  18880291 gtcgaactataatcgagttggttcggttcattgtcagc 18880328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 24 - 160
Target Start/End: Original strand, 10493989 - 10494125
Alignment:
Q  24 gttcatctcatttagttaatgaacttaattttccgctcaagttcagttcatttggttcataaatcaagttcaacgagataattatcgaatcgagtttcga 123  Q
    ||||| |||||||| |||| || ||||||||||  |||||||||   ||||||||||  | || ||||||||||||   |||||| ||||||| | || |    
T  10493989 gttcagctcatttatttaacgagcttaattttcaactcaagttcgactcatttggtttgtgaaccaagttcaacgaaccaattattgaatcgaatatcaa 10494088  T
Q  124 actattttcgagttggttcggttcattgtcagcccta 160  Q
    |||||||| ||||||||||||||||||| ||||||||    
T  10494089 actatttttgagttggttcggttcattgccagcccta 10494125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 24 - 160
Target Start/End: Original strand, 26298315 - 26298451
Alignment:
Q  24 gttcatctcatttagttaatgaacttaattttccgctcaagttcagttcatttggttcataaatcaagttcaacgagataattatcgaatcgagtttcga 123  Q
    ||||| |||||||| |||| || |||||||||   ||||||||    ||||| ||||||| |||||||||||||||   |||||||||||||| | ||      
T  26298315 gttcaactcatttatttaacgagcttaattttaaactcaagtttgactcattaggttcatgaatcaagttcaacgaatcaattatcgaatcgaatctcac 26298414  T
Q  124 actattttcgagttggttcggttcattgtcagcccta 160  Q
    |||||||| ||||||||||||||||||| ||||||||    
T  26298415 actatttttgagttggttcggttcattgccagcccta 26298451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 24 - 160
Target Start/End: Complemental strand, 34719793 - 34719657
Alignment:
Q  24 gttcatctcatttagttaatgaacttaattttccgctcaagttcagttcatttggttcataaatcaagttcaacgagataattatcgaatcgagtttcga 123  Q
    ||||| |||||||| |||| || |||||||||   |||||||||   |||||  |||||| |||||||||||||||   |||||||||||| | | |||     
T  34719793 gttcaactcatttatttaacgagcttaattttaaactcaagttcgactcattaagttcatgaatcaagttcaacgaatcaattatcgaatcaaatctcgc 34719694  T
Q  124 actattttcgagttggttcggttcattgtcagcccta 160  Q
    |||||||||||||||||||| ||||||| ||||||||    
T  34719693 actattttcgagttggttcgtttcattgccagcccta 34719657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 30 - 141
Target Start/End: Complemental strand, 40056493 - 40056382
Alignment:
Q  30 ctcatttagttaatgaacttaattttccgctcaagttcagttcatttggttcataaatcaagttcaacgagataattatcgaatcgagtttcgaactatt 129  Q
    |||||||| |||| |||||||||||||  ||||| || |  | ||||||||||| || ||| ||||||||||||||| ||||||||| |||| |||||||    
T  40056493 ctcatttatttaacgaacttaattttcatctcaaatttaacttatttggttcatgaaccaaattcaacgagataattgtcgaatcgaatttcaaactatt 40056394  T
Q  130 ttcgagttggtt 141  Q
     |||||||||||    
T  40056393 atcgagttggtt 40056382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 58 - 162
Target Start/End: Original strand, 15933201 - 15933305
Alignment:
Q  58 gctcaagttcagttcatttggttcataaatcaagttcaacgagataattatcgaatcgagtttcgaactattttcgagttggttcggttcattgtcagcc 157  Q
    ||||| |||||  ||||| ||||||| || ||||||||||||  ||| | |||| |||| |||||||||||  ||||||||||||||||||||| |||||    
T  15933201 gctcatgttcaactcattaggttcatgaaccaagttcaacgaattaactgtcgagtcgaatttcgaactatactcgagttggttcggttcattgccagcc 15933300  T
Q  158 ctaca 162  Q
    |||||    
T  15933301 ctaca 15933305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 24 - 160
Target Start/End: Complemental strand, 34724890 - 34724754
Alignment:
Q  24 gttcatctcatttagttaatgaacttaattttccgctcaagttcagttcatttggttcataaatcaagttcaacgagataattatcgaatcgagtttcga 123  Q
    ||||| |||||||| |||| || |||||||||   |||||||||   ||||| ||||||| |||||||||||||||   ||||||| |||||| | ||      
T  34724890 gttcaactcatttatttaacgagcttaattttaaactcaagttcgactcattaggttcatgaatcaagttcaacgaatcaattatcaaatcgaatctcac 34724791  T
Q  124 actattttcgagttggttcggttcattgtcagcccta 160  Q
    ||||||||| |||||||||||||||||| | ||||||    
T  34724790 actattttcaagttggttcggttcattgccggcccta 34724754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 71 - 150
Target Start/End: Original strand, 26299898 - 26299977
Alignment:
Q  71 tcatttggttcataaatcaagttcaacgagataattatcgaatcgagtttcgaactattttcgagttggttcggttcatt 150  Q
    ||||| ||||||| ||| |||||||||||   |||||||||||||| | ||| |||||||||||||||||||||||||||    
T  26299898 tcattaggttcatgaatgaagttcaacgaatcaattatcgaatcgaatctcgcactattttcgagttggttcggttcatt 26299977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 71 - 160
Target Start/End: Original strand, 19716234 - 19716318
Alignment:
Q  71 tcatttggttcataaatcaagttcaacgagataattatcgaatcgagtttcgaactattttcgagttggttcggttcattgtcagcccta 160  Q
    ||||| ||||||| |||||||||||||||   ||||||||||||     ||| |||||||||||||||||||||||||||| ||||||||    
T  19716234 tcattaggttcatgaatcaagttcaacgaatcaattatcgaatc-----tcgcactattttcgagttggttcggttcattgccagcccta 19716318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 88 - 160
Target Start/End: Original strand, 28247478 - 28247550
Alignment:
Q  88 caagttcaacgagataattatcgaatcgagtttcgaactattttcgagttggttcggttcattgtcagcccta 160  Q
    ||||||||||||   ||||||| |||| | | ||||||||||||||| |||||||||||||||||||||||||    
T  28247478 caagttcaacgaatcaattatcaaatcaaatatcgaactattttcgaattggttcggttcattgtcagcccta 28247550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 59 - 146
Target Start/End: Original strand, 3457869 - 3457956
Alignment:
Q  59 ctcaagttcagttcatttggttcataaatcaagttcaacgagataattatcgaatcgagtttcgaactattttcgagttggttcggtt 146  Q
    |||||||||  |||||||||||||  |||| ||||||||||  |||||| | |||||| | || ||||||||||||||||||||||||    
T  3457869 ctcaagttcgattcatttggttcaagaatcgagttcaacgaactaattaccaaatcgaatctcaaactattttcgagttggttcggtt 3457956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 11 - 126
Target Start/End: Complemental strand, 11136155 - 11136041
Alignment:
Q  11 atatatatctcatgttcatctcatttagttaatgaacttaattttccgctcaagttcagttcatttggttcataaatcaagttcaacgagataattatcg 110  Q
    ||||||| |||| ||||| ||||||||||||| ||||||||| ||  |||||||||| | || |||||||| | || ||||||||||||  |||||| ||    
T  11136155 atatataactcaagttcaactcatttagttaacgaacttaatctttagctcaagttcggctcgtttggttc-tgaaccaagttcaacgaactaattaccg 11136057  T
Q  111 aatcgagtttcgaact 126  Q
    | ||||||| ||||||    
T  11136056 agtcgagttccgaact 11136041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 30 - 160
Target Start/End: Original strand, 34857357 - 34857487
Alignment:
Q  30 ctcatttagttaatgaacttaattttccgctcaagttcagttcatttggttcataaatcaagttcaacgagataattatcgaatcgagtttcgaactatt 129  Q
    |||||||| |||| || |||||||||   |||||||||   ||||| | ||||| |||||||||||||||   |||||| |||| || | ||  ||||||    
T  34857357 ctcatttatttaacgagcttaattttaaactcaagttcgactcattagattcatgaatcaagttcaacgaatcaattattgaattgaatctcacactatt 34857456  T
Q  130 ttcgagttggttcggttcattgtcagcccta 160  Q
    |||||||||||||||||||||| || |||||    
T  34857457 ttcgagttggttcggttcattgccaacccta 34857487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 103 - 160
Target Start/End: Original strand, 39409209 - 39409266
Alignment:
Q  103 aattatcgaatcgagtttcgaactattttcgagttggttcggttcattgtcagcccta 160  Q
    |||||||||||||| | ||| |||||||||||||||||||||||||||  ||||||||    
T  39409209 aattatcgaatcgaatctcgcactattttcgagttggttcggttcattaccagcccta 39409266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 89 - 161
Target Start/End: Original strand, 1091192 - 1091264
Alignment:
Q  89 aagttcaacgagataattatcgaatcgagtttcgaactattttcgagttggttcggttcattgtcagccctac 161  Q
    |||||||||||  | ||||||||||||||| | ||||| ||||  |||||||||||||||| |||||||||||    
T  1091192 aagttcaacgaattcattatcgaatcgagtcttgaactttttttaagttggttcggttcatcgtcagccctac 1091264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 44 - 151
Target Start/End: Complemental strand, 20190700 - 20190594
Alignment:
Q  44 gaacttaattttccgctcaagttcagttcatttggttcataaatcaagttcaacgagataattatcgaatcgagtttcgaactattttcgagttggttcg 143  Q
    ||||||||||||  |||||||||| | ||||||||||||| || ||||||| | ||   |||||||||||||| || |||||| |  | |||||||||||    
T  20190700 gaacttaattttgagctcaagttcggctcatttggttcatgaaccaagttcgatgaatcaattatcgaatcgaattacgaact-taatagagttggttcg 20190602  T
Q  144 gttcattg 151  Q
    ||||||||    
T  20190601 gttcattg 20190594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 62 - 156
Target Start/End: Complemental strand, 17168541 - 17168447
Alignment:
Q  62 aagttcagttcatttggttcataaatcaagttcaacgagataattatcgaatcgagtttcgaactattttcgagttggttcggttcattgtcagc 156  Q
    |||||| | ||||||||||  | || |||||||||| |  ||| ||||||||| ||| || |||||||||||||||  |||||||||||||||||    
T  17168541 aagttcggctcatttggtttgtgaaccaagttcaacaaattaaatatcgaatctagtctcaaactattttcgagttacttcggttcattgtcagc 17168447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 71 - 149
Target Start/End: Original strand, 28431106 - 28431184
Alignment:
Q  71 tcatttggttcataaatcaagttcaacgagataattatcgaatcgagtttcgaactattttcgagttggttcggttcat 149  Q
    |||||| |||||| || |||||||||| |   ||||||||||||| || ||||||||||| |||||||||| |||||||    
T  28431106 tcatttagttcatgaaccaagttcaacaattcaattatcgaatcgtgtatcgaactatttacgagttggtttggttcat 28431184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 47 - 116
Target Start/End: Original strand, 1225378 - 1225447
Alignment:
Q  47 cttaattttccgctcaagttcagttcatttggttcataaatcaagttcaacgagataattatcgaatcga 116  Q
    ||||||||||  |||||||||   ||||||||||||||||  ||||||||||| | ||||||||||||||    
T  1225378 cttaattttcaactcaagttcgactcatttggttcataaactaagttcaacgaaacaattatcgaatcga 1225447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 47 - 155
Target Start/End: Original strand, 24202729 - 24202837
Alignment:
Q  47 cttaattttccgctcaagttcagttcatttggttcataaatcaagttcaacgagataattatcgaatcgagtttcgaactattttcgagttggttcggtt 146  Q
    ||||||||||  |||||||||  ||||||| |||||| ||  ||||  ||| || | |||| |||||| ||||||||||||||||  |||||||| ||||    
T  24202729 cttaattttcaactcaagttcgattcatttagttcatcaacaaagtctaacaagttgattaccgaatcaagtttcgaactatttttaagttggtttggtt 24202828  T
Q  147 cattgtcag 155  Q
    || ||||||    
T  24202829 cactgtcag 24202837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 25 - 157
Target Start/End: Original strand, 24536012 - 24536144
Alignment:
Q  25 ttcatctcatttagttaatgaacttaattttccgctcaagttcagttcatttggttcataaatcaagttcaacgagataattatcgaatcgagtttcgaa 124  Q
    |||| ||| |||| |||| ||||||||||||  |||||| || || ||||||| ||||| || ||  |||||| |  |||||||| |||  ||| | |||    
T  24536012 ttcaactcgtttatttaacgaacttaattttgagctcaaatttagctcatttgattcatgaaccagattcaacaaattaattatcaaattaagtcttgaa 24536111  T
Q  125 ctattttcgagttggttcggttcattgtcagcc 157  Q
    |||||||| ||||||||| ||||||| ||||||    
T  24536112 ctattttcaagttggttcagttcattttcagcc 24536144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 71 - 163
Target Start/End: Original strand, 36523806 - 36523898
Alignment:
Q  71 tcatttggttcataaatcaagttcaacgagataattatcgaatcgagtttcgaactattttcgagttggttcggttcattgtcagccctacat 163  Q
    ||||||||||||| || ||||||||| ||    ||||||||||| ||| ||| ||| | ||||||||  ||||||||||||||| ||||||||    
T  36523806 tcatttggttcatgaaccaagttcaatgaatctattatcgaatcaagtctcggactttattcgagttaattcggttcattgtcatccctacat 36523898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 11 - 148
Target Start/End: Complemental strand, 30661056 - 30660919
Alignment:
Q  11 atatatatctcatgttcatctcatttagttaatgaacttaattttccgctcaagttcagttcatttggttcataaatcaagttcaacgagataattatcg 110  Q
    |||||||  ||||||||  ||||| || ||||  ||||||||||||  || || ||||| |||||| |||||| ||  ||||||||  |   ||||||||    
T  30661056 atatatagttcatgttcgactcatataattaacaaacttaattttcaacttaaattcagctcatttagttcatgaactaagttcaataaatcaattatcg 30660957  T
Q  111 aatcgagtttcgaactattttcgagttggttcggttca 148  Q
    ||||||||||  |||||  |||||||||||||| ||||    
T  30660956 aatcgagttttaaactaaattcgagttggttcgattca 30660919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 77; Significance: 8e-36; HSPs: 19)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 30 - 162
Target Start/End: Original strand, 3307944 - 3308076
Alignment:
Q  30 ctcatttagttaatgaacttaattttccgctcaagttcagttcatttggttcataaatcaagttcaacgagataattatcgaatcgagtttcgaactatt 129  Q
    |||||||| |||| ||||||||||||| |||||||||| | ||||||||||||| ||  |||||| ||||| ||||| |||||||||||| |||||||||    
T  3307944 ctcatttatttaacgaacttaattttctgctcaagttcggctcatttggttcatgaactaagttctacgagttaattgtcgaatcgagttccgaactatt 3308043  T
Q  130 ttcgagttggttcggttcattgtcagccctaca 162  Q
     ||||||||||||||||||||| ||||||||||    
T  3308044 gtcgagttggttcggttcattgccagccctaca 3308076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 40 - 150
Target Start/End: Original strand, 32740659 - 32740769
Alignment:
Q  40 taatgaacttaattttccgctcaagttcagttcatttggttcataaatcaagttcaacgagataattatcgaatcgagtttcgaactattttcgagttgg 139  Q
    ||||||||||| ||||| | |||||||||||||||||||||||| || ||| ||||| ||| ||||| |||||| ||||| | ||||||| |||||||||    
T  32740659 taatgaacttatttttcagttcaagttcagttcatttggttcatgaaccaaattcaatgagttaattgtcgaattgagttccaaactattgtcgagttgg 32740758  T
Q  140 ttcggttcatt 150  Q
    |||||||||||    
T  32740759 ttcggttcatt 32740769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 60 - 161
Target Start/End: Original strand, 39478090 - 39478191
Alignment:
Q  60 tcaagttcagttcatttggttcataaatcaagttcaacgagataattatcgaatcgagtttcgaactattttcgagttggttcggttcattgtcagccct 159  Q
    |||||||||  ||||||||||||| || ||||| ||| ||   |||||||||||||||| |||||||||||||||||||||||||||||||| |||||||    
T  39478090 tcaagttcaactcatttggttcatgaaccaagtccaatgaaccaattatcgaatcgagtatcgaactattttcgagttggttcggttcattgccagccct 39478189  T
Q  160 ac 161  Q
    ||    
T  39478190 ac 39478191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 58 - 151
Target Start/End: Original strand, 43384832 - 43384925
Alignment:
Q  58 gctcaagttcagttcatttggttcataaatcaagttcaacgagataattatcgaatcgagtttcgaactattttcgagttggttcggttcattg 151  Q
    |||||||||||  ||||||||||||| || ||| ||||||||  ||||||||||||||| | ||||||||||||||||||||||||||||||||    
T  43384832 gctcaagttcaactcatttggttcatgaaccaacttcaacgaattaattatcgaatcgaatctcgaactattttcgagttggttcggttcattg 43384925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 31 - 161
Target Start/End: Original strand, 9135963 - 9136093
Alignment:
Q  31 tcatttagttaatgaacttaattttccgctcaagttcagttcatttggttcataaatcaagttcaacgagataattatcgaatcgagtttcgaactattt 130  Q
    ||||||||||||  ||||||| |||| |||||||||||| | ||||| |||||||| ||||||||||||| ||||| |||| |||||||   ||||||||    
T  9135963 tcatttagttaacaaacttaaatttcagctcaagttcagcttatttgattcataaaccaagttcaacgagttaattgtcgagtcgagttctaaactattt 9136062  T
Q  131 tcgagttggttcggttcattgtcagccctac 161  Q
    | ||||||  || ||||||| ||||||||||    
T  9136063 ttgagttgtctcagttcattttcagccctac 9136093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 11 - 160
Target Start/End: Complemental strand, 9412673 - 9412524
Alignment:
Q  11 atatatatctcatgttcatctcatttagttaatgaacttaattttccgctcaagttcagttcatttggttcataaatcaagttcaacgagataattatcg 110  Q
    ||||||| ||||  |||| ||||||||  ||| ||| |||||| ||  ||||||||||| ||||||||||||| || ||||||||||||| | ||| |||    
T  9412673 atatataactcaaattcagctcatttatgtaacgaatttaattctcaactcaagttcagctcatttggttcatgaaccaagttcaacgagttcattgtcg 9412574  T
Q  111 aatcgagtttcgaactattttcgagttggttcggttcattgtcagcccta 160  Q
    | ||||| | | ||||||  ||||||||||||||||||||| ||||||||    
T  9412573 agtcgagctccaaactataatcgagttggttcggttcattgccagcccta 9412524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 11 - 161
Target Start/End: Original strand, 43967501 - 43967651
Alignment:
Q  11 atatatatctcatgttcatctcatttagttaatgaacttaattttccgctcaagttcagttcatttggttcataaatcaagttcaacgagataattatcg 110  Q
    ||||||| |||| ||||| ||||||||||||| ||||||||| ||  |||||||||| | || |||||||||| || ||| ||||||||  ||||||  |    
T  43967501 atatataactcaagttcaactcatttagttaacgaacttaatctttagctcaagttcggctcgtttggttcatgaaccaaattcaacgaactaattactg 43967600  T
Q  111 aatcgagtttcgaactattttcgagttggttcggttcattgtcagccctac 161  Q
    | ||||||| |||||| | ||| |||||  ||||||||||| |||||||||    
T  43967601 agtcgagttccgaactttgttcaagttgtatcggttcattgccagccctac 43967651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 19 - 160
Target Start/End: Original strand, 453482 - 453623
Alignment:
Q  19 ctcatgttcatctcatttagttaatgaacttaattttccgctcaagttcagttcatttggttcataaatcaagttcaacgagataattatcgaatcgagt 118  Q
    |||| ||||| |||||||| |||| |||||||||||||  ||||||| ||| || || ||||||| || |||||||||||   ||  |||||| |||| |    
T  453482 ctcaagttcaactcatttaattaacgaacttaattttcaactcaagtccagctcgttaggttcatgaaccaagttcaacggattagatatcgagtcgaat 453581  T
Q  119 ttcgaactattttcgagttggttcggttcattgtcagcccta 160  Q
     |||||||||  ||||||||||||||||||||| ||||||||    
T  453582 gtcgaactataatcgagttggttcggttcattgccagcccta 453623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 24 - 160
Target Start/End: Complemental strand, 33280113 - 33279977
Alignment:
Q  24 gttcatctcatttagttaatgaacttaattttccgctcaagttcagttcatttggttcataaatcaagttcaacgagataattatcgaatcgagtttcga 123  Q
    ||||| |||| |||||| | ||||||||||||  |||||  ||| | ||||||||||||| || ||||||| ||||   |||||||||||| | || |||    
T  33280113 gttcagctcaattagttgacgaacttaattttaagctcatattcggctcatttggttcatgaaccaagttcgacgaatcaattatcgaatcaaattacga 33280014  T
Q  124 actattttcgagttggttcggttcattgtcagcccta 160  Q
    ||| |  ||||||||||||||||||||||||||||||    
T  33280013 actttaatcgagttggttcggttcattgtcagcccta 33279977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 13 - 150
Target Start/End: Complemental strand, 27189229 - 27189092
Alignment:
Q  13 atatatctcatgttcatctcatttagttaatgaacttaattttccgctcaagttcagttcatttggttcataaatcaagttcaacgagataattatcgaa 112  Q
    ||||| |||| ||||| |||| |||||| | ||||||||||||| ||||||||||   ||||||||||||| || ||||||| ||||   ||||||||||    
T  27189229 atataactcaagttcaactcaattagttgacgaacttaattttcagctcaagttcgactcatttggttcatgaaccaagttcgacgaatcaattatcgaa 27189130  T
Q  113 tcgagtttcgaactattttcgagttggttcggttcatt 150  Q
    || | || |||||| |  |||||||| |||||||||||    
T  27189129 tctaattacgaactctaatcgagttgattcggttcatt 27189092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 74 - 150
Target Start/End: Original strand, 1091781 - 1091857
Alignment:
Q  74 tttggttcataaatcaagttcaacgagataattatcgaatcgagtttcgaactattttcgagttggttcggttcatt 150  Q
    |||||||||| |||||||||||||||  ||||||||||||||||| || ||||||||| ||||| |||| |||||||    
T  1091781 tttggttcatgaatcaagttcaacgaattaattatcgaatcgagtctcaaactatttttgagtttgttcagttcatt 1091857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 19 - 151
Target Start/End: Original strand, 11161571 - 11161703
Alignment:
Q  19 ctcatgttcatctcatttagttaatgaacttaattttccgctcaagttcagttcatttggttcataaatcaagttcaacgagataattatcgaatcgagt 118  Q
    |||| ||||| |||||||| |||| ||||||||||||| |||||||| ||| || || ||||||| || |||||||||||   ||| |||||| |||| |    
T  11161571 ctcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaat 11161670  T
Q  119 ttcgaactattttcgagttggttcggttcattg 151  Q
     |||||||||  || |||||||| |||||||||    
T  11161671 gtcgaactataatcaagttggtttggttcattg 11161703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 58 - 160
Target Start/End: Original strand, 12378390 - 12378492
Alignment:
Q  58 gctcaagttcagttcatttggttcataaatcaagttcaacgagataattatcgaatcgagtttcgaactattttcgagttggttcggttcattgtcagcc 157  Q
    |||||||||||  ||||||||||| | || ||||||||||||   |||||||||| ||| | ||| |||||||| ||||| |||||||||||||||| ||    
T  12378390 gctcaagttcaactcatttggttcgtgaaccaagttcaacgaatcaattatcgaaccgaatctcggactatttttgagtttgttcggttcattgtcaacc 12378489  T
Q  158 cta 160  Q
    |||    
T  12378490 cta 12378492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 47 - 156
Target Start/End: Original strand, 22564033 - 22564142
Alignment:
Q  47 cttaattttccgctcaagttcagttcatttggttcataaatcaagttcaacgagataattatcgaatcgagtttcgaactattttcgagttggttcggtt 146  Q
    ||||||||||  |||||||||  || ||||||||||| || |||||||||||| | ||||| |||||| | |||| || |||||||||||||| ||||||    
T  22564033 cttaattttcaactcaagttcgatttatttggttcatgaaccaagttcaacgaaacaattaccgaatcaaatttcaaattattttcgagttggatcggtt 22564132  T
Q  147 cattgtcagc 156  Q
    | ||| ||||    
T  22564133 cgttgccagc 22564142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 11 - 160
Target Start/End: Original strand, 34655026 - 34655175
Alignment:
Q  11 atatatatctcatgttcatctcatttagttaatgaacttaattttccgctcaagttcagttcatttggttcataaatcaagttcaacgagataattatcg 110  Q
    ||||||| |||| ||| | |||||||||||||  |||||||| ||  ||||||||||   || |||||||||| ||  ||||||||| |  |||||| ||    
T  34655026 atatataactcaagtttaactcatttagttaacaaacttaatctttagctcaagttcgactcgtttggttcatgaactaagttcaacaaactaattaccg 34655125  T
Q  111 aatcgagtttcgaactattttcgagttggttcggttcattgtcagcccta 160  Q
    | ||||||| |||||| | |||||||||  ||||||||||| ||||||||    
T  34655126 agtcgagttccgaactttattcgagttgtatcggttcattgccagcccta 34655175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 44 - 151
Target Start/End: Original strand, 34516162 - 34516269
Alignment:
Q  44 gaacttaattttccgctcaagttcagttcatttggttcataaatcaagttcaacgagataattatcgaatcgagtttcgaactattttcgagttggttcg 143  Q
    ||||||||||||| |||||||||| | |||||||||| || |||||||||||| ||   |||| |||||| || || |||||| |  | |||||||||||    
T  34516162 gaacttaattttcagctcaagttcggctcatttggttgatgaatcaagttcaatgaatcaattgtcgaattgaattacgaactttaattgagttggttcg 34516261  T
Q  144 gttcattg 151  Q
    ||||||||    
T  34516262 gttcattg 34516269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 48 - 160
Target Start/End: Original strand, 24854627 - 24854739
Alignment:
Q  48 ttaattttccgctcaagttcagttcatttggttcataaatcaagttcaacgagataattatcgaatcgagtttcgaactattttcgagttggttcggttc 147  Q
    ||||||||| |||||||||||  |||||||||||| ||| |||||| |||||| ||||| |||| | || |||| |||| | ||| || || |||||||     
T  24854627 ttaattttcagctcaagttcaactcatttggttcacaaaccaagtttaacgagttaattgtcgagttgaatttcaaactttattcaagctgtttcggttt 24854726  T
Q  148 attgtcagcccta 160  Q
    |||| || |||||    
T  24854727 attgccaacccta 24854739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 24 - 119
Target Start/End: Original strand, 23181159 - 23181254
Alignment:
Q  24 gttcatctcatttagttaatgaacttaattttccgctcaagttcagttcatttggttcataaatcaagttcaacgagataattatcgaatcgagtt 119  Q
    ||||| |||| |||||| | ||||||||||||| | |||||||| | ||||||||||||| || ||| ||| ||||   |||| ||||||||||||    
T  23181159 gttcagctcaattagtttacgaacttaattttcagttcaagttcggctcatttggttcatgaaccaaattcgacgaatcaattgtcgaatcgagtt 23181254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 59 - 160
Target Start/End: Complemental strand, 17865489 - 17865388
Alignment:
Q  59 ctcaagttcagttcatttggttcataaatcaagttcaacgagataattatcgaatcgagtttcgaactattttcgagttggttcggttcattgtcagccc 158  Q
    ||||||||| | || |||||||||| || |||||| |||||  |||||| ||| ||||||| |||| | | || ||||||  ||||||||||| ||||||    
T  17865489 ctcaagttcggctcgtttggttcatgaaccaagttaaacgaactaattaccgagtcgagttccgaattttatttgagttgtctcggttcattgccagccc 17865390  T
Q  159 ta 160  Q
    ||    
T  17865389 ta 17865388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0171 (Bit Score: 74; Significance: 5e-34; HSPs: 1)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 19 - 160
Target Start/End: Original strand, 21087 - 21227
Alignment:
Q  19 ctcatgttcatctcatttagttaatgaacttaattttccgctcaagttcagttcatttggttcataaatcaagttcaacgagataattatcgaatcgagt 118  Q
    |||| ||||| |||||||| ||||||| ||||||||||  |||||||||   || |||||||||| || ||||||||||||   ||||||||||||||||    
T  21087 ctcaagttcaactcatttatttaatgagcttaattttcaactcaagttcgactc-tttggttcatgaaccaagttcaacgaatcaattatcgaatcgagt 21185  T
Q  119 ttcgaactattttcgagttggttcggttcattgtcagcccta 160  Q
     |||||||||||||||||||||||||||||||||||||||||    
T  21186 ctcgaactattttcgagttggttcggttcattgtcagcccta 21227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0223 (Bit Score: 67; Significance: 8e-30; HSPs: 1)
Name: scaffold0223
Description:

Target: scaffold0223; HSP #1
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 30 - 160
Target Start/End: Original strand, 14436 - 14566
Alignment:
Q  30 ctcatttagttaatgaacttaattttccgctcaagttcagttcatttggttcataaatcaagttcaacgagataattatcgaatcgagtttcgaactatt 129  Q
    |||||||| || | || ||||||||||  ||||||||||  ||||||||||||| || ||||||||| ||   ||||| |||||||||||||||||||||    
T  14436 ctcatttatttgacgagcttaattttcgactcaagttcaaatcatttggttcatgaaccaagttcaatgaatcaattaccgaatcgagtttcgaactatt 14535  T
Q  130 ttcgagttggttcggttcattgtcagcccta 160  Q
    |||| ||||||||||||||||||||||||||    
T  14536 ttcgggttggttcggttcattgtcagcccta 14566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 59; Significance: 5e-25; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 30 - 160
Target Start/End: Original strand, 11400 - 11530
Alignment:
Q  30 ctcatttagttaatgaacttaattttccgctcaagttcagttcatttggttcataaatcaagttcaacgagataattatcgaatcgagtttcgaactatt 129  Q
    |||||||| |||| ||||||||||||   || |||||||  ||||||||||||| ||  |||||| ||||| ||||| |||||||||||| | |||||||    
T  11400 ctcatttatttaacgaacttaatttttaacttaagttcacctcatttggttcatgaactaagttcgacgaggtaattgtcgaatcgagttccaaactatt 11499  T
Q  130 ttcgagttggttcggttcattgtcagcccta 160  Q
     ||||||||||||||||||||||||| ||||    
T  11500 atcgagttggttcggttcattgtcagtccta 11530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0260 (Bit Score: 51; Significance: 3e-20; HSPs: 2)
Name: scaffold0260
Description:

Target: scaffold0260; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 25 - 151
Target Start/End: Original strand, 11474 - 11600
Alignment:
Q  25 ttcatctcatttagttaatgaacttaattttccgctcaagttcagttcatttggttcataaatcaagttcaacgagataattatcgaatcgagtttcgaa 124  Q
    |||| |||||||| |||| |||||||||||||  || |||||| | |||||||||  || |||||||||||||||  |||||||||| || | |||  ||    
T  11474 ttcagctcatttaattaacgaacttaattttcatctgaagttcggctcatttggtatatgaatcaagttcaacgaattaattatcgagtcaaattttaaa 11573  T
Q  125 ctattttcgagttggttcggttcattg 151  Q
    |||| ||||||||||||||||||||||    
T  11574 ctatgttcgagttggttcggttcattg 11600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0260; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 25 - 151
Target Start/End: Original strand, 9994 - 10120
Alignment:
Q  25 ttcatctcatttagttaatgaacttaattttccgctcaagttcagttcatttggttcataaatcaagttcaacgagataattatcgaatcgagtttcgaa 124  Q
    |||| |||||||| |||| |||||||||||||  || |||||| | ||||||||| ||| |||||| ||||||||  ||||| |||| || | |||  ||    
T  9994 ttcagctcatttaattaacgaacttaattttcatcttaagttcggctcatttggtacatgaatcaaattcaacgaattaattgtcgagtcaaattttaaa 10093  T
Q  125 ctattttcgagttggttcggttcattg 151  Q
    |||| ||||||||| ||||||||||||    
T  10094 ctatattcgagttgattcggttcattg 10120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0316 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0316
Description:

Target: scaffold0316; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 19 - 160
Target Start/End: Original strand, 19295 - 19436
Alignment:
Q  19 ctcatgttcatctcatttagttaatgaacttaattttccgctcaagttcagttcatttggttcataaatcaagttcaacgagataattatcgaatcgagt 118  Q
    |||| ||||| |||||||| |||| ||||||||||||| |||||||| ||| || || ||||||| || ||||||||| |   ||  |||||| |||| |    
T  19295 ctcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaaaggattagatatcgagtcgaat 19394  T
Q  119 ttcgaactattttcgagttggttcggttcattgtcagcccta 160  Q
     |||||||||  ||||||||||||||||||||| ||||||||    
T  19395 gtcgaactataatcgagttggttcggttcattgccagcccta 19436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0224 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0224
Description:

Target: scaffold0224; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 24 - 161
Target Start/End: Complemental strand, 7444 - 7307
Alignment:
Q  24 gttcatctcatttagttaatgaacttaattttccgctcaagttcagttcatttggttcataaatcaagttcaacgagataattatcgaatcgagtttcga 123  Q
    ||||| |||| |||||||  ||||||||||||| |||||||||| | ||||||||||||| || ||||||| ||||   |||||||||||||| || |||    
T  7444 gttcagctcaattagttagcgaacttaattttcagctcaagttcggctcatttggttcatgaaccaagttcgacgaatcaattatcgaatcgaattacga 7345  T
Q  124 actattttcgagttggttcggttcattgtcagccctac 161  Q
    ||  |  |||| |||||||||||||||| || ||||||    
T  7344 acactaatcgaattggttcggttcattgccacccctac 7307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0135 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0135
Description:

Target: scaffold0135; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 88 - 151
Target Start/End: Complemental strand, 32857 - 32794
Alignment:
Q  88 caagttcaacgagataattatcgaatcgagtttcgaactattttcgagttggttcggttcattg 151  Q
    ||||||||||||   |||| ||||||||||| ||||||||||||||||||||||||||||||||    
T  32857 caagttcaacgaaccaattgtcgaatcgagtatcgaactattttcgagttggttcggttcattg 32794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0204 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0204
Description:

Target: scaffold0204; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 24 - 161
Target Start/End: Complemental strand, 26757 - 26620
Alignment:
Q  24 gttcatctcatttagttaatgaacttaattttccgctcaagttcagttcatttggttcataaatcaagttcaacgagataattatcgaatcgagtttcga 123  Q
    ||||| |||| |||||| | ||||||||||||| ||||||||||   ||||||| ||||| || |||||||||| |   | || ||||||||| || |||    
T  26757 gttcagctcaattagttgacgaacttaattttcagctcaagttcgactcatttgattcatgaaccaagttcaacaaatcagttgtcgaatcgaattacga 26658  T
Q  124 actattttcgagttggttcggttcattgtcagccctac 161  Q
    ||| |  | ||||||||||| |||||||||||||||||    
T  26657 actctaattgagttggttcgattcattgtcagccctac 26620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 25 - 151
Target Start/End: Complemental strand, 124616 - 124490
Alignment:
Q  25 ttcatctcatttagttaatgaacttaattttccgctcaagttcagttcatttggttcataaatcaagttcaacgagataattatcgaatcgagtttcgaa 124  Q
    |||| |||||||| ||||  ||||||||  || ||||||||||   ||||||||||||| || ||||||||| |    |||| |||| || | |||||||    
T  124616 ttcagctcatttaattaacaaacttaataatcagctcaagttcgactcatttggttcatgaaccaagttcaatggaccaattgtcgagtcaaatttcgaa 124517  T
Q  125 ctattttcgagttggttcggttcattg 151  Q
    |||| ||||||||||||||||||||||    
T  124516 ctatattcgagttggttcggttcattg 124490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0444 (Bit Score: 36; Significance: 0.00000000002; HSPs: 2)
Name: scaffold0444
Description:

Target: scaffold0444; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 109 - 160
Target Start/End: Complemental strand, 830 - 779
Alignment:
Q  109 cgaatcgagtttcgaactattttcgagttggttcggttcattgtcagcccta 160  Q
    |||||||||| || |||||||||||| |||||||||||||||| ||||||||    
T  830 cgaatcgagtctcaaactattttcgaattggttcggttcattggcagcccta 779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0444; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 19 - 99
Target Start/End: Complemental strand, 908 - 828
Alignment:
Q  19 ctcatgttcatctcatttagttaatgaacttaattttccgctcaagttcagttcatttggttcataaatcaagttcaacga 99  Q
    |||| ||||| |||||||| |||| || ||||||||||  | ||| ||||  ||||||||||||| || ||||||||||||    
T  908 ctcaagttcaactcatttatttaacgagcttaattttcaacccaaattcaactcatttggttcatgaaccaagttcaacga 828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 71 - 160
Target Start/End: Original strand, 96331 - 96420
Alignment:
Q  71 tcatttggttcataaatcaagttcaacgagataattatcgaatcgagtttcgaactattttcgagttggttcggttcattgtcagcccta 160  Q
    ||||||||||||  ||| |||||||| ||  || ||| |||| ||| | |||||||||||||||| | ||||||||||||||||| ||||    
T  96331 tcatttggttcacgaattaagttcaatgaattatttaacgaaccgaatctcgaactattttcgagctagttcggttcattgtcagtccta 96420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0192 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0192
Description:

Target: scaffold0192; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 11 - 99
Target Start/End: Complemental strand, 25714 - 25627
Alignment:
Q  11 atatatatctcatgttcatctcatttagttaatgaacttaattttccgctcaagttcagttcatttggttcataaatcaagttcaacga 99  Q
    |||||||  ||| |||||||||||||| |||| | ||||||||||| | | |||||| | |||||||  ||||||| ||||||||||||    
T  25714 atatataattcaagttcatctcatttaattaacggacttaattttcagtttaagttc-gctcatttgactcataaaccaagttcaacga 25627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0063 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0063
Description:

Target: scaffold0063; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 71 - 151
Target Start/End: Complemental strand, 51391 - 51311
Alignment:
Q  71 tcatttggttcataaatcaagttcaacgagataattatcgaatcgagtttcgaactattttcgagttggttcggttcattg 151  Q
    ||||||||||||  ||  |||||||||||  || ||| |||| ||| | |||||||||||||||| | |||||||||||||    
T  51391 tcatttggttcacgaactaagttcaacgaattatttaccgaaccgaatctcgaactattttcgagctagttcggttcattg 51311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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