View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15371_low_13 (Length: 260)
Name: NF15371_low_13
Description: NF15371
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15371_low_13 |
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Alignment Details
Target: chr4 (Bit Score: 222; Significance: 1e-122; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 222; E-Value: 1e-122
Query Start/End: Original strand, 24 - 245
Target Start/End: Original strand, 25786864 - 25787085
Alignment:
| Q |
24 |
ccatagtgttttcttttcctcaactctgctatatataatagcttctcttgttaatctcttcttcatccaaattccaaaccctagccaactagtagaagca |
123 |
Q |
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| T |
25786864 |
ccatagtgttttcttttcctcaactctgctatatataatagcttctcttgttaatctcttcttcatccaaattccaaaccctagccaactagtagaagca |
25786963 |
T |
|
| Q |
124 |
gctagcatcacttaatattcaaatctcatcttcagaagcttaatttctttttagttattgttttccatcatgcaccataccaagttgaagctgccagcat |
223 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
25786964 |
gctagcatcacttaatattcaaatctcatcttcagaagcttaatttctttttagttattgttttccatcatgcaccataccaagttgaagctgccagcat |
25787063 |
T |
|
| Q |
224 |
gatcttaactggcctcctttgt |
245 |
Q |
| |
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|||||||||||||||||||||| |
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| T |
25787064 |
gatcttaactggcctcctttgt |
25787085 |
T |
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