View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF15371_low_3 (Length: 454)

Name: NF15371_low_3
Description: NF15371
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF15371_low_3
NF15371_low_3
[»] chr7 (50 HSPs)
chr7 (14-176)||(6258003-6258165)
chr7 (298-443)||(6257736-6257881)
chr7 (340-443)||(9194213-9194316)
chr7 (340-430)||(21005695-21005785)
chr7 (340-432)||(1462334-1462426)
chr7 (298-387)||(1462243-1462332)
chr7 (298-387)||(21005787-21005876)
chr7 (340-432)||(9004395-9004486)
chr7 (340-443)||(48713238-48713342)
chr7 (299-401)||(4461012-4461114)
chr7 (298-390)||(19515686-19515778)
chr7 (298-387)||(48713147-48713236)
chr7 (356-432)||(10204468-10204543)
chr7 (356-432)||(14941945-14942020)
chr7 (356-432)||(15369538-15369613)
chr7 (356-451)||(33609492-33609589)
chr7 (356-431)||(15707457-15707531)
chr7 (356-431)||(25181186-25181260)
chr7 (340-429)||(19515599-19515687)
chr7 (356-416)||(4313017-4313077)
chr7 (298-390)||(9004304-9004396)
chr7 (356-431)||(35964459-35964533)
chr7 (357-415)||(649018-649076)
chr7 (346-443)||(9264608-9264705)
chr7 (356-416)||(4307647-4307707)
chr7 (356-416)||(8880187-8880247)
chr7 (356-432)||(13434661-13434736)
chr7 (298-401)||(11484131-11484234)
chr7 (299-380)||(9192494-9192576)
chr7 (299-387)||(4307540-4307629)
chr7 (299-387)||(4312910-4312999)
chr7 (298-387)||(9194318-9194407)
chr7 (299-387)||(13434554-13434643)
chr7 (356-437)||(16897496-16897577)
chr7 (299-387)||(25181278-25181367)
chr7 (299-387)||(33612577-33612666)
chr7 (299-378)||(14942047-14942126)
chr7 (299-378)||(15369640-15369719)
chr7 (356-415)||(33612501-33612559)
chr7 (299-387)||(649095-649184)
chr7 (299-387)||(16463534-16463623)
chr7 (307-387)||(33609393-33609474)
chr7 (299-387)||(48355898-48355987)
chr7 (307-383)||(9264717-9264793)
chr7 (356-416)||(16463456-16463516)
chr7 (299-353)||(8880349-8880403)
chr7 (299-353)||(15707584-15707638)
chr7 (356-409)||(48355827-48355880)
chr7 (299-386)||(35964552-35964640)
chr7 (299-387)||(10204361-10204450)
[»] scaffold0098 (1 HSPs)
scaffold0098 (298-443)||(44502-44647)
[»] chr6 (31 HSPs)
chr6 (298-443)||(26138390-26138535)
chr6 (298-443)||(26017635-26017781)
chr6 (298-443)||(26157008-26157154)
chr6 (298-443)||(25507320-25507465)
chr6 (299-416)||(23574910-23575027)
chr6 (339-443)||(5398996-5399099)
chr6 (298-401)||(18234089-18234192)
chr6 (299-416)||(23517585-23517702)
chr6 (307-416)||(17739358-17739467)
chr6 (299-432)||(17284281-17284414)
chr6 (340-432)||(5949867-5949959)
chr6 (340-430)||(29253753-29253842)
chr6 (356-432)||(25949102-25949177)
chr6 (298-390)||(29253662-29253754)
chr6 (298-401)||(12660733-12660836)
chr6 (306-401)||(18399903-18399998)
chr6 (356-429)||(25963702-25963774)
chr6 (356-429)||(25968349-25968421)
chr6 (298-390)||(5949958-5950050)
chr6 (356-416)||(32543037-32543097)
chr6 (298-387)||(5398905-5398995)
chr6 (307-401)||(13217570-13217664)
chr6 (299-387)||(25948995-25949084)
chr6 (299-387)||(25963595-25963684)
chr6 (299-387)||(25968242-25968331)
chr6 (298-382)||(12658260-12658344)
chr6 (298-353)||(20222194-20222249)
chr6 (298-353)||(22116178-22116233)
chr6 (299-344)||(3923381-3923426)
chr6 (307-387)||(32542938-32543019)
chr6 (299-363)||(20464003-20464067)
[»] chr3 (22 HSPs)
chr3 (298-432)||(22038605-22038738)
chr3 (298-401)||(34053879-34053982)
chr3 (367-443)||(13601521-13601597)
chr3 (356-432)||(14495032-14495107)
chr3 (299-407)||(17022964-17023072)
chr3 (312-407)||(20225520-20225615)
chr3 (356-432)||(11398668-11398743)
chr3 (298-390)||(19567325-19567416)
chr3 (298-390)||(25766018-25766110)
chr3 (356-431)||(36075974-36076048)
chr3 (340-430)||(19567237-19567326)
chr3 (298-387)||(13601414-13601503)
chr3 (356-432)||(14661000-14661075)
chr3 (356-432)||(25054814-25054889)
chr3 (299-387)||(14495125-14495214)
chr3 (356-415)||(3245284-3245343)
chr3 (299-387)||(14661093-14661182)
chr3 (299-387)||(3250385-3250474)
chr3 (369-415)||(3250329-3250375)
chr3 (301-387)||(11398564-11398651)
chr3 (299-353)||(3245396-3245450)
chr3 (299-353)||(25054705-25054759)
[»] scaffold0264 (1 HSPs)
scaffold0264 (298-443)||(22626-22775)
[»] scaffold0012 (2 HSPs)
scaffold0012 (340-443)||(49652-49755)
scaffold0012 (298-387)||(49561-49650)
[»] chr5 (14 HSPs)
chr5 (342-432)||(20104161-20104251)
chr5 (307-416)||(2953786-2953895)
chr5 (298-387)||(20104255-20104344)
chr5 (356-432)||(15059232-15059307)
chr5 (356-431)||(23343759-23343833)
chr5 (346-416)||(20738119-20738189)
chr5 (367-432)||(20967558-20967622)
chr5 (340-432)||(21273407-21273498)
chr5 (298-401)||(16676806-16676909)
chr5 (298-387)||(25486009-25486098)
chr5 (299-387)||(20967440-20967529)
chr5 (299-387)||(15059125-15059214)
chr5 (299-387)||(23343851-23343940)
chr5 (298-379)||(24164708-24164789)
[»] chr1 (22 HSPs)
chr1 (339-443)||(8648624-8648728)
chr1 (307-438)||(39286843-39286973)
chr1 (298-436)||(30819301-30819438)
chr1 (340-443)||(20412019-20412122)
chr1 (356-432)||(44538041-44538116)
chr1 (298-387)||(20411928-20412017)
chr1 (299-403)||(16382344-16382448)
chr1 (356-432)||(17716529-17716604)
chr1 (356-431)||(52236088-52236162)
chr1 (299-403)||(25405274-25405378)
chr1 (307-452)||(43998192-43998323)
chr1 (356-431)||(16431345-16431419)
chr1 (309-387)||(8648545-8648623)
chr1 (356-432)||(48256089-48256164)
chr1 (356-415)||(26134756-26134815)
chr1 (299-387)||(48255982-48256071)
chr1 (299-387)||(16431238-16431327)
chr1 (299-387)||(17716422-17716511)
chr1 (299-387)||(44537934-44538023)
chr1 (307-387)||(52236180-52236261)
chr1 (299-353)||(26134868-26134922)
chr1 (299-363)||(20861115-20861179)
[»] chr4 (22 HSPs)
chr4 (340-451)||(10730915-10731026)
chr4 (340-451)||(10944684-10944795)
chr4 (299-416)||(38651866-38651983)
chr4 (356-432)||(24125437-24125512)
chr4 (356-430)||(45233914-45233987)
chr4 (306-390)||(11889309-11889393)
chr4 (356-416)||(11902856-11902916)
chr4 (356-432)||(15409830-15409905)
chr4 (356-432)||(31593671-31593746)
chr4 (356-414)||(45244498-45244556)
chr4 (356-417)||(21275031-21275092)
chr4 (299-387)||(13622011-13622099)
chr4 (369-432)||(13622109-13622171)
chr4 (356-414)||(3772439-3772497)
chr4 (299-387)||(11902934-11903023)
chr4 (356-401)||(11889249-11889294)
chr4 (299-387)||(15409723-15409812)
chr4 (299-387)||(45234005-45234094)
chr4 (299-378)||(24125538-24125618)
chr4 (298-353)||(5513962-5514017)
chr4 (298-375)||(10730825-10730902)
chr4 (298-375)||(10944594-10944671)
[»] scaffold0334 (1 HSPs)
scaffold0334 (307-407)||(6936-7036)
[»] scaffold0092 (2 HSPs)
scaffold0092 (340-428)||(19751-19839)
scaffold0092 (298-378)||(19850-19930)
[»] chr8 (11 HSPs)
chr8 (356-441)||(9973-10058)
chr8 (340-432)||(14351853-14351944)
chr8 (340-432)||(24967045-24967136)
chr8 (356-431)||(18161799-18161873)
chr8 (299-416)||(21319158-21319275)
chr8 (298-401)||(24341774-24341877)
chr8 (298-390)||(24966954-24967046)
chr8 (307-388)||(10060-10141)
chr8 (299-390)||(14351943-14352033)
chr8 (299-387)||(18161692-18161781)
chr8 (298-379)||(24221905-24221986)
[»] scaffold0168 (2 HSPs)
scaffold0168 (340-443)||(9079-9182)
scaffold0168 (307-378)||(9193-9264)
[»] chr2 (27 HSPs)
chr2 (298-390)||(23140287-23140379)
chr2 (298-390)||(23552077-23552169)
chr2 (356-432)||(24507110-24507185)
chr2 (341-417)||(44997996-44998072)
chr2 (356-430)||(25481177-25481250)
chr2 (356-430)||(25488783-25488856)
chr2 (309-401)||(15583502-15583594)
chr2 (340-432)||(23140197-23140288)
chr2 (340-432)||(23551987-23552078)
chr2 (298-387)||(29568801-29568890)
chr2 (341-401)||(29568738-29568798)
chr2 (298-381)||(25858962-25859045)
chr2 (362-416)||(32441634-32441688)
chr2 (362-432)||(16134407-16134476)
chr2 (298-388)||(44997904-44997994)
chr2 (356-416)||(20281829-20281889)
chr2 (299-401)||(25337421-25337523)
chr2 (362-415)||(19927200-19927253)
chr2 (397-443)||(25858861-25858907)
chr2 (299-387)||(19927087-19927176)
chr2 (306-387)||(20281730-20281811)
chr2 (299-387)||(32441712-32441801)
chr2 (299-380)||(24507003-24507085)
chr2 (299-387)||(11390846-11390935)
chr2 (299-387)||(11407507-11407596)
chr2 (299-387)||(16134500-16134589)
chr2 (298-378)||(24371795-24371875)
[»] scaffold0471 (2 HSPs)
scaffold0471 (356-432)||(10025-10100)
scaffold0471 (299-378)||(10126-10206)
[»] scaffold0371 (2 HSPs)
scaffold0371 (356-432)||(9306-9381)
scaffold0371 (299-387)||(9399-9488)
[»] scaffold0251 (2 HSPs)
scaffold0251 (356-432)||(19159-19234)
scaffold0251 (299-387)||(19252-19341)
[»] scaffold0713 (2 HSPs)
scaffold0713 (298-388)||(6950-7040)
scaffold0713 (399-438)||(6922-6961)
[»] scaffold0064 (2 HSPs)
scaffold0064 (356-430)||(48589-48662)
scaffold0064 (299-377)||(48482-48561)
[»] scaffold0058 (2 HSPs)
scaffold0058 (367-432)||(61654-61718)
scaffold0058 (300-387)||(61542-61630)
[»] scaffold0057 (2 HSPs)
scaffold0057 (356-416)||(20958-21018)
scaffold0057 (299-387)||(20851-20940)
[»] scaffold0031 (4 HSPs)
scaffold0031 (356-410)||(23063-23117)
scaffold0031 (356-417)||(100168-100229)
scaffold0031 (299-387)||(22956-23045)
scaffold0031 (299-387)||(100061-100150)
[»] scaffold0916 (2 HSPs)
scaffold0916 (356-432)||(3289-3364)
scaffold0916 (299-387)||(3182-3271)
[»] scaffold0360 (1 HSPs)
scaffold0360 (299-380)||(39-121)
[»] scaffold0096 (2 HSPs)
scaffold0096 (374-432)||(38167-38224)
scaffold0096 (356-410)||(38210-38264)
[»] scaffold0197 (2 HSPs)
scaffold0197 (356-416)||(9109-9169)
scaffold0197 (299-387)||(9187-9276)
[»] scaffold0447 (4 HSPs)
scaffold0447 (356-415)||(6217-6276)
scaffold0447 (356-415)||(10831-10890)
scaffold0447 (299-353)||(6132-6186)
scaffold0447 (299-353)||(10746-10800)
[»] scaffold0383 (2 HSPs)
scaffold0383 (356-415)||(8826-8885)
scaffold0383 (299-353)||(8741-8795)
[»] scaffold0213 (2 HSPs)
scaffold0213 (299-387)||(26667-26756)
scaffold0213 (299-386)||(21370-21456)
[»] scaffold0014 (1 HSPs)
scaffold0014 (298-379)||(167827-167908)


Alignment Details
Target: chr7 (Bit Score: 111; Significance: 7e-56; HSPs: 50)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 111; E-Value: 7e-56
Query Start/End: Original strand, 14 - 176
Target Start/End: Complemental strand, 6258165 - 6258003
Alignment:
Q  14 ttctcattaaattcactttatctaactatttttcatgatatttatccgtcggataaacttcaattattacatatgatcgtatctaataagaatgataatg 113  Q
    ||||| |||||||||||||||||||| ||||||||||| |||||| |||||||||||||| ||||||||||||||||||||||| |||||||||||||||    
T  6258165 ttctctttaaattcactttatctaacaatttttcatgacatttattcgtcggataaactttaattattacatatgatcgtatctgataagaatgataatg 6258066  T
Q  114 tatggtgcggttgttcttggtgtttgtgatggcggggtaagtattatcggtcaataatgagtc 176  Q
    | ||||||||||| ||| |||||||||||  ||||||||||||| ||| ||||||||||||||    
T  6258065 tctggtgcggttggtctgggtgtttgtgacagcggggtaagtatgatcagtcaataatgagtc 6258003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 298 - 443
Target Start/End: Complemental strand, 6257881 - 6257736
Alignment:
Q  298 gaaagatggagtcttggagcaaaagaaataagaattagagctgattcatgccaaaatcatgaagatctcatacaaaaatatcttgtgcaaagaatttgaa 397  Q
    |||||||||| ||||| ||||| |||||  ||| || |||||||||||||  ||||  |||||||||| |||||||||||||||||||||||||||||||    
T  6257881 gaaagatggaatcttgcagcaatagaaaggagacttggagctgattcatgtaaaaaatatgaagatctaatacaaaaatatcttgtgcaaagaatttgaa 6257782  T
Q  398 gatcttgtacaaaaatataacaagtggcgcgccccttttgcccttt 443  Q
    |||||||||||||||||||||||||||||| |||||||||||||||    
T  6257781 gatcttgtacaaaaatataacaagtggcgcaccccttttgcccttt 6257736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 340 - 443
Target Start/End: Complemental strand, 9194316 - 9194213
Alignment:
Q  340 gattcatgccaaaatcatgaagatctcatacaaaaatatcttgtgcaaagaatttgaagatcttgtacaaaaatataacaagtggcgcgccccttttgcc 439  Q
    ||||||||||||||  ||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||| |||||||| ||    
T  9194316 gattcatgccaaaaatatgaagatctcatacaaaaatatcttgtgtaaagaatttgaagatcttgtgcaaaaatataacaagtggcgcaccccttttacc 9194217  T
Q  440 cttt 443  Q
    ||||    
T  9194216 cttt 9194213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 340 - 430
Target Start/End: Complemental strand, 21005785 - 21005695
Alignment:
Q  340 gattcatgccaaaatcatgaagatctcatacaaaaatatcttgtgcaaagaatttgaagatcttgtacaaaaatataacaagtggcgcgcc 430  Q
    ||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  21005785 gattcatgcaaaaattatgaagatctcatacaaaaatatcttgtgcaaagaatttgaagatctcgtacaaaaatataacaagtggcgcgcc 21005695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 340 - 432
Target Start/End: Original strand, 1462334 - 1462426
Alignment:
Q  340 gattcatgccaaaatcatgaagatctcatacaaaaatatcttgtgcaaagaatttgaagatcttgtacaaaaatataacaagtggcgcgcccc 432  Q
    |||||||| |||||  ||||||||| |||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  1462334 gattcatgtcaaaaatatgaagatcccatacaaaaaaatcttgtgcaaagaattagaagatcttgtacaaaaatataacaagtggcgcgcccc 1462426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 298 - 387
Target Start/End: Original strand, 1462243 - 1462332
Alignment:
Q  298 gaaagatggagtcttggagcaaaagaaataagaattagagctgattcatgccaaaatcatgaagatctcatacaaaaatatcttgtgcaa 387  Q
    ||||||||||||||||||||||||||||  |||||| ||||| |||||||||||||  ||||||||||||||||||||||||||||||||    
T  1462243 gaaagatggagtcttggagcaaaagaaaggagaattggagcttattcatgccaaaagtatgaagatctcatacaaaaatatcttgtgcaa 1462332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 298 - 387
Target Start/End: Complemental strand, 21005876 - 21005787
Alignment:
Q  298 gaaagatggagtcttggagcaaaagaaataagaattagagctgattcatgccaaaatcatgaagatctcatacaaaaatatcttgtgcaa 387  Q
    ||||||||||||||||||||||||||||  |||||| ||||| |||||||||||||  ||||||||||||||||||||||||||||||||    
T  21005876 gaaagatggagtcttggagcaaaagaaaggagaattggagcttattcatgccaaaaatatgaagatctcatacaaaaatatcttgtgcaa 21005787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 340 - 432
Target Start/End: Original strand, 9004395 - 9004486
Alignment:
Q  340 gattcatgccaaaatcatgaagatctcatacaaaaatatcttgtgcaaagaatttgaagatcttgtacaaaaatataacaagtggcgcgcccc 432  Q
    ||||||||||||||  ||||||||||||||| |||||||||| ||||||||||||||||||||||||||| ||||||| ||||||||||||||    
T  9004395 gattcatgccaaaaatatgaagatctcataccaaaatatcttatgcaaagaatttgaagatcttgtacaataatataa-aagtggcgcgcccc 9004486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 340 - 443
Target Start/End: Original strand, 48713238 - 48713342
Alignment:
Q  340 gattcatgccaaaatcatgaagatctcatacaaaaa-tatcttgtgcaaagaatttgaagatcttgtacaaaaatataacaagtggcgcgccccttttgc 438  Q
    ||||||||||||||  |||||||||||||||||||| ||| |||| ||||||||||||||||||||| ||||||||||||||||| ||| |||||||| |    
T  48713238 gattcatgccaaaaatatgaagatctcatacaaaaaatatattgttcaaagaatttgaagatcttgtgcaaaaatataacaagtgccgcaccccttttac 48713337  T
Q  439 ccttt 443  Q
    |||||    
T  48713338 ccttt 48713342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 299 - 401
Target Start/End: Complemental strand, 4461114 - 4461012
Alignment:
Q  299 aaagatggagtcttggagcaaaagaaataagaattagagctgattcatgccaaaatcatgaagatctcatacaaaaatatcttgtgcaaagaatttgaag 398  Q
    |||||| | ||||||||||||||||||  |||||| |||||||| | ||||||||  |||||||||| ||||||||||||||||||||||||||||||||    
T  4461114 aaagattgcgtcttggagcaaaagaaaggagaattggagctgatccgtgccaaaaatatgaagatcttatacaaaaatatcttgtgcaaagaatttgaag 4461015  T
Q  399 atc 401  Q
    |||    
T  4461014 atc 4461012  T

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Target: chr7; HSP #11
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 298 - 390
Target Start/End: Complemental strand, 19515778 - 19515686
Alignment:
Q  298 gaaagatggagtcttggagcaaaagaaataagaattagagctgattcatgccaaaatcatgaagatctcatacaaaaatatcttgtgcaaaga 390  Q
    ||||||||||||||||||||||||||||  | |||| |||||||||| ||||||||  ||||||||||||||||||||||||| |||||||||    
T  19515778 gaaagatggagtcttggagcaaaagaaaggataattggagctgattcgtgccaaaaatatgaagatctcatacaaaaatatctggtgcaaaga 19515686  T

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Target: chr7; HSP #12
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 298 - 387
Target Start/End: Original strand, 48713147 - 48713236
Alignment:
Q  298 gaaagatggagtcttggagcaaaagaaataagaattagagctgattcatgccaaaatcatgaagatctcatacaaaaatatcttgtgcaa 387  Q
    ||||||||||||||||||||||||||||  |||||||||||| |||||||||||||  || |||||||||| ||||||||| ||||||||    
T  48713147 gaaagatggagtcttggagcaaaagaaaagagaattagagcttattcatgccaaaaatataaagatctcatgcaaaaatatattgtgcaa 48713236  T

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Target: chr7; HSP #13
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 356 - 432
Target Start/End: Original strand, 10204468 - 10204543
Alignment:
Q  356 atgaagatctcatacaaaaatatcttgtgcaaagaatttgaagatcttgtacaaaaatataacaagtggcgcgcccc 432  Q
    ||||| |||||||||||||||||| ||||||||||||||||||||||||||||| ||||||| ||||||||||||||    
T  10204468 atgaatatctcatacaaaaatatcatgtgcaaagaatttgaagatcttgtacaataatataa-aagtggcgcgcccc 10204543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 356 - 432
Target Start/End: Complemental strand, 14942020 - 14941945
Alignment:
Q  356 atgaagatctcatacaaaaatatcttgtgcaaagaatttgaagatcttgtacaaaaatataacaagtggcgcgcccc 432  Q
    ||||| |||||||||||||||||| ||||||||||||||||||||||||||||| ||||||| ||||||||||||||    
T  14942020 atgaatatctcatacaaaaatatcatgtgcaaagaatttgaagatcttgtacaataatataa-aagtggcgcgcccc 14941945  T

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Target: chr7; HSP #15
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 356 - 432
Target Start/End: Complemental strand, 15369613 - 15369538
Alignment:
Q  356 atgaagatctcatacaaaaatatcttgtgcaaagaatttgaagatcttgtacaaaaatataacaagtggcgcgcccc 432  Q
    ||||| |||||||||||||||||| ||||||||||||||||||||||||||||| ||||||| ||||||||||||||    
T  15369613 atgaatatctcatacaaaaatatcatgtgcaaagaatttgaagatcttgtacaataatataa-aagtggcgcgcccc 15369538  T

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Target: chr7; HSP #16
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 356 - 451
Target Start/End: Original strand, 33609492 - 33609589
Alignment:
Q  356 atgaagatctcatacaaaaatatcttgtgcaaagaatttgaagatcttgtacaaaaatataacaagtggcgcgccccttttg--ccctttgcttcttc 451  Q
    ||||| |||||||||||||||||| ||||||||||||||||||||||||||||| ||||  ||||| |||||||||| ||||  ||||||||| ||||    
T  33609492 atgaatatctcatacaaaaatatcatgtgcaaagaatttgaagatcttgtacaataatacgacaagaggcgcgccccctttggtccctttgctgcttc 33609589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 356 - 431
Target Start/End: Complemental strand, 15707531 - 15707457
Alignment:
Q  356 atgaagatctcatacaaaaatatcttgtgcaaagaatttgaagatcttgtacaaaaatataacaagtggcgcgccc 431  Q
    ||||| |||||||||||||||||| ||||||||||||||||||||||||||||| ||||||| ||||||| |||||    
T  15707531 atgaatatctcatacaaaaatatcatgtgcaaagaatttgaagatcttgtacaataatataa-aagtggcacgccc 15707457  T

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Target: chr7; HSP #18
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 356 - 431
Target Start/End: Complemental strand, 25181260 - 25181186
Alignment:
Q  356 atgaagatctcatacaaaaatatcttgtgcaaagaatttgaagatcttgtacaaaaatataacaagtggcgcgccc 431  Q
    ||||| ||||||||||||||||||||||| |||||||||||||||||||||||| ||||||| |||||| ||||||    
T  25181260 atgaatatctcatacaaaaatatcttgtgaaaagaatttgaagatcttgtacaataatataa-aagtggtgcgccc 25181186  T

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Target: chr7; HSP #19
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 340 - 429
Target Start/End: Complemental strand, 19515687 - 19515599
Alignment:
Q  340 gattcatgccaaaatcatgaagatctcatacaaaaatatcttgtgcaaagaatttgaagatcttgtacaaaaatataacaagtggcgcgc 429  Q
    |||||||| |||||  ||||||||||||||| |||||||||| |||||||||||||||||||| |||||| ||||| | |||||||||||    
T  19515687 gattcatgtcaaaaatatgaagatctcataccaaaatatcttatgcaaagaatttgaagatctcgtacaataatatga-aagtggcgcgc 19515599  T

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Target: chr7; HSP #20
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 356 - 416
Target Start/End: Original strand, 4313017 - 4313077
Alignment:
Q  356 atgaagatctcatacaaaaatatcttgtgcaaagaatttgaagatcttgtacaaaaatata 416  Q
    ||||| |||||||||||||||||| |||||||||||||||||||||||||||||| |||||    
T  4313017 atgaatatctcatacaaaaatatcatgtgcaaagaatttgaagatcttgtacaaatatata 4313077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 298 - 390
Target Start/End: Original strand, 9004304 - 9004396
Alignment:
Q  298 gaaagatggagtcttggagcaaaagaaataagaattagagctgattcatgccaaaatcatgaagatctcatacaaaaatatcttgtgcaaaga 390  Q
    ||||||| ||||||||| |||||||||| ||||||| ||||| ||||||| |||||  || |||||||||| ||||||||| |||||||||||    
T  9004304 gaaagattgagtcttggggcaaaagaaagaagaattggagcttattcatggcaaaaatataaagatctcatgcaaaaatatattgtgcaaaga 9004396  T

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Target: chr7; HSP #22
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 356 - 431
Target Start/End: Complemental strand, 35964533 - 35964459
Alignment:
Q  356 atgaagatctcatacaaaaatatcttgtgcaaagaatttgaagatcttgtacaaaaatataacaagtggcgcgccc 431  Q
    ||||| |||||||||||||||||| |||||||||||||| ||||||||||||||| |||| ||||| |||||||||    
T  35964533 atgaatatctcatacaaaaatatcctgtgcaaagaatttaaagatcttgtacaaatatat-acaagaggcgcgccc 35964459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 357 - 415
Target Start/End: Complemental strand, 649076 - 649018
Alignment:
Q  357 tgaagatctcatacaaaaatatcttgtgcaaagaatttgaagatcttgtacaaaaatat 415  Q
    |||| |||||||||||||||||| |||||||||||||||||||||||||||||| ||||    
T  649076 tgaatatctcatacaaaaatatcatgtgcaaagaatttgaagatcttgtacaaacatat 649018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 346 - 443
Target Start/End: Complemental strand, 9264705 - 9264608
Alignment:
Q  346 tgccaaaatcatgaagatctcatacaaaaatatcttgtgcaaagaatttgaagatcttgtacaaaaatataacaagtggcgcgccccttttgcccttt 443  Q
    ||||||||  |||||||||| |  ||||||||| |||||| ||||||||||| ||||||| |||||||||||||||||| ||  ||||||| ||||||    
T  9264705 tgccaaaaatatgaagatctaaagcaaaaatatattgtgcgaagaatttgaatatcttgtgcaaaaatataacaagtggtgcaacccttttacccttt 9264608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 356 - 416
Target Start/End: Original strand, 4307647 - 4307707
Alignment:
Q  356 atgaagatctcatacaaaaatatcttgtgcaaagaatttgaagatcttgtacaaaaatata 416  Q
    ||||| |||||||||||||||||  |||||||||||||||||||||||||||||| |||||    
T  4307647 atgaatatctcatacaaaaatattatgtgcaaagaatttgaagatcttgtacaaatatata 4307707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 356 - 416
Target Start/End: Complemental strand, 8880247 - 8880187
Alignment:
Q  356 atgaagatctcatacaaaaatatcttgtgcaaagaatttgaagatcttgtacaaaaatata 416  Q
    ||||| |||||||||||||||||| |||||||| ||||||||||||||||||||| |||||    
T  8880247 atgaatatctcatacaaaaatatcctgtgcaaaaaatttgaagatcttgtacaaacatata 8880187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 356 - 432
Target Start/End: Original strand, 13434661 - 13434736
Alignment:
Q  356 atgaagatctcatacaaaaatatcttgtgcaaagaatttgaagatcttgtacaaaaatataacaagtggcgcgcccc 432  Q
    ||||| |||||||||||||||||   ||||||||||||||||||||||||||||| |||| ||||| ||||||||||    
T  13434661 atgaatatctcatacaaaaatattccgtgcaaagaatttgaagatcttgtacaaatatat-acaagaggcgcgcccc 13434736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 298 - 401
Target Start/End: Complemental strand, 11484234 - 11484131
Alignment:
Q  298 gaaagatggagtcttggagcaaaagaaataagaattagagctgattcatgccaaaatcatgaagatctcatacaaaaatatcttgtgcaaagaatttgaa 397  Q
    ||||||| ||||||  ||||||||||||  ||| || ||||||||| |||||||||  |||||||||| |||||||| ||||||||||||| | | ||||    
T  11484234 gaaagattgagtctcagagcaaaagaaaggagatttggagctgatttatgccaaaagtatgaagatcttatacaaaagtatcttgtgcaaaaagtgtgaa 11484135  T
Q  398 gatc 401  Q
    ||||    
T  11484134 gatc 11484131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 299 - 380
Target Start/End: Original strand, 9192494 - 9192576
Alignment:
Q  299 aaagatggagtcttggagcaaaagaaataagaattagagctgattcatgccaaaatcat-gaagatctcatacaaaaatatct 380  Q
    |||||| |||||||||||||||||||| ||||||| |||||||||| ||||||||  ||  ||||||| ||||||||||||||    
T  9192494 aaagattgagtcttggagcaaaagaaagaagaattggagctgattcgtgccaaaaatataaaagatcttatacaaaaatatct 9192576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 299 - 387
Target Start/End: Original strand, 4307540 - 4307629
Alignment:
Q  299 aaagatggagtcttggagcaaaagaaataagaattagagctgattcatgccaaaatcat-gaagatctcatacaaaaatatcttgtgcaa 387  Q
    |||||| |||||||||| |||||||||  ||||||||||||||||| ||||||||  ||  ||||||| |||||||||||||| ||||||    
T  4307540 aaagattgagtcttggaacaaaagaaaggagaattagagctgattcgtgccaaaaatataaaagatcttatacaaaaatatctggtgcaa 4307629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 299 - 387
Target Start/End: Original strand, 4312910 - 4312999
Alignment:
Q  299 aaagatggagtcttggagcaaaagaaataagaattagagctgattcatgccaaaatcatg-aagatctcatacaaaaatatcttgtgcaa 387  Q
    |||||| ||||||||||||||||||||  | |||| |||||||||| ||||||||  ||| |||||||||||||||| ||||| ||||||    
T  4312910 aaagattgagtcttggagcaaaagaaaggaaaattggagctgattcgtgccaaaaatatgaaagatctcatacaaaattatctggtgcaa 4312999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 298 - 387
Target Start/End: Complemental strand, 9194407 - 9194318
Alignment:
Q  298 gaaagatggagtcttggagcaaaagaaataagaattagagctgattcatgccaaaatcatgaagatctcatacaaaaatatcttgtgcaa 387  Q
    ||||||||||||||||||||||||||||  ||||||  |||| |||||||||||||  || ||||| |||| ||||||||| || |||||    
T  9194407 gaaagatggagtcttggagcaaaagaaaggagaattgaagcttattcatgccaaaaatataaagatttcatgcaaaaatatattctgcaa 9194318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 299 - 387
Target Start/End: Original strand, 13434554 - 13434643
Alignment:
Q  299 aaagatggagtcttggagcaaaagaaataagaattagagctgattcatgccaaaatcat-gaagatctcatacaaaaatatcttgtgcaa 387  Q
    |||||| |||||||||||||||||||| ||||||| |||| ||||| ||||||||  ||  ||||||| |||||||||||||| ||||||    
T  13434554 aaagattgagtcttggagcaaaagaaagaagaatttgagcggattcgtgccaaaaatataaaagatcttatacaaaaatatctggtgcaa 13434643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 356 - 437
Target Start/End: Complemental strand, 16897577 - 16897496
Alignment:
Q  356 atgaagatctcatacaaaaatatcttgtgcaaagaatttgaagatcttgtacaaaaatataacaagtggcgcgccccttttg 437  Q
    ||||| ||||||||||||||||| |||||||| ||||||||| ||||||||||| ||||  ||||| |||| ||||| ||||    
T  16897577 atgaatatctcatacaaaaatatattgtgcaaggaatttgaaaatcttgtacaataatacgacaagaggcgtgccccctttg 16897496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 299 - 387
Target Start/End: Complemental strand, 25181367 - 25181278
Alignment:
Q  299 aaagatggagtcttggagcaaaagaaataagaattagagctgattcatgccaaaatcat-gaagatctcatacaaaaatatcttgtgcaa 387  Q
    |||||| |||| |||||||||||||||| |||||| |||||||||| ||||||||  ||  ||||||| |||||||||||||| ||||||    
T  25181367 aaagattgagttttggagcaaaagaaatgagaattggagctgattcgtgccaaaactataaaagatcttatacaaaaatatctggtgcaa 25181278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 299 - 387
Target Start/End: Complemental strand, 33612666 - 33612577
Alignment:
Q  299 aaagatggagtcttggagcaaaagaaataagaattagagctgattcatgccaaaatcat-gaagatctcatacaaaaatatcttgtgcaa 387  Q
    |||||| ||||||||||||||||||||| |||||| ||| |||||| ||||||||  ||  ||||||| |||||||||||||| ||||||    
T  33612666 aaagattgagtcttggagcaaaagaaatgagaattggagttgattcgtgccaaaaatataaaagatcttatacaaaaatatctggtgcaa 33612577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 299 - 378
Target Start/End: Complemental strand, 14942126 - 14942047
Alignment:
Q  299 aaagatggagtcttggagcaaaagaaataagaattagagctgattcatgccaaaatcatgaagatctcatacaaaaatat 378  Q
    |||||| ||||||||||||||||||||  |||||| |||||||||| |||||||||    ||||||| ||||||||||||    
T  14942126 aaagattgagtcttggagcaaaagaaaggagaattggagctgattcgtgccaaaatataaaagatcttatacaaaaatat 14942047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 299 - 378
Target Start/End: Complemental strand, 15369719 - 15369640
Alignment:
Q  299 aaagatggagtcttggagcaaaagaaataagaattagagctgattcatgccaaaatcatgaagatctcatacaaaaatat 378  Q
    |||||| ||||||||||||||||||||  |||||| |||||||||| |||||||||    ||||||| ||||||||||||    
T  15369719 aaagattgagtcttggagcaaaagaaaggagaattggagctgattcgtgccaaaatataaaagatcttatacaaaaatat 15369640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 356 - 415
Target Start/End: Complemental strand, 33612559 - 33612501
Alignment:
Q  356 atgaagatctcatacaaaaatatcttgtgcaaagaatttgaagatcttgtacaaaaatat 415  Q
    ||||| ||||||||||||| |||| |||||||||||||||||||||||||||||| ||||    
T  33612559 atgaatatctcatacaaaa-tatcatgtgcaaagaatttgaagatcttgtacaaatatat 33612501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 299 - 387
Target Start/End: Complemental strand, 649184 - 649095
Alignment:
Q  299 aaagatggagtcttggagcaaaagaaataagaattagagctgattcatgccaaaatcat-gaagatctcatacaaaaatatcttgtgcaa 387  Q
    |||||| ||||||||||||||||||||  |||||| |||||||||| ||||||||  ||  |||||||  ||||||||||||| ||||||    
T  649184 aaagattgagtcttggagcaaaagaaaggagaattggagctgattcgtgccaaaaatataaaagatcttgtacaaaaatatctggtgcaa 649095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 299 - 387
Target Start/End: Complemental strand, 16463623 - 16463534
Alignment:
Q  299 aaagatggagtcttggagcaaaagaaataagaattagagctgattcatgccaaaatcat-gaagatctcatacaaaaatatcttgtgcaa 387  Q
    |||||| ||||||||||||||||||||  |||||| ||||| |||| ||||||||  ||  ||||||| |||||||||||||| ||||||    
T  16463623 aaagattgagtcttggagcaaaagaaaggagaattggagctaattcgtgccaaaaatataaaagatcttatacaaaaatatctggtgcaa 16463534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 307 - 387
Target Start/End: Original strand, 33609393 - 33609474
Alignment:
Q  307 agtcttggagcaaaagaaataagaattagagctgattcatgccaaaatcat-gaagatctcatacaaaaatatcttgtgcaa 387  Q
    |||||||||||||||||||  |||||| |||||||||||||||||||  ||  ||||||| | |||||||||||| ||||||    
T  33609393 agtcttggagcaaaagaaaggagaatttgagctgattcatgccaaaaatataaaagatcttacacaaaaatatctggtgcaa 33609474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 299 - 387
Target Start/End: Complemental strand, 48355987 - 48355898
Alignment:
Q  299 aaagatggagtcttggagcaaaagaaataagaattagagctgattcatgccaaaatcat-gaagatctcatacaaaaatatcttgtgcaa 387  Q
    |||||| ||||||||||||||||||||  | |||| |||||||||| ||||||||  ||  ||||||| |||||||||||||| ||||||    
T  48355987 aaagattgagtcttggagcaaaagaaaggataattggagctgattcgtgccaaaaatataaaagatcttatacaaaaatatctggtgcaa 48355898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 307 - 383
Target Start/End: Complemental strand, 9264793 - 9264717
Alignment:
Q  307 agtcttggagcaaaagaaataagaattagagctgattcatgccaaaatcatgaagatctcatacaaaaatatcttgt 383  Q
    |||||||||||||||||||  |||||| || || |||||||||||||  ||||||||||||| ||||| ||| ||||    
T  9264793 agtcttggagcaaaagaaaggagaattggaacttattcatgccaaaaatatgaagatctcatgcaaaagtatattgt 9264717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 356 - 416
Target Start/End: Complemental strand, 16463516 - 16463456
Alignment:
Q  356 atgaagatctcatacaaaaatatcttgtgcaaagaatttgaagatcttgtacaaaaatata 416  Q
    ||||| ||||||| |||||||||| | ||||||||||||||||||||| |||||| |||||    
T  16463516 atgaatatctcatgcaaaaatatcctatgcaaagaatttgaagatcttctacaaatatata 16463456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 299 - 353
Target Start/End: Complemental strand, 8880403 - 8880349
Alignment:
Q  299 aaagatggagtcttggagcaaaagaaataagaattagagctgattcatgccaaaa 353  Q
    |||||| ||||||||||||||||||||  |||||| |||||||||| ||||||||    
T  8880403 aaagattgagtcttggagcaaaagaaaagagaattggagctgattcgtgccaaaa 8880349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 299 - 353
Target Start/End: Complemental strand, 15707638 - 15707584
Alignment:
Q  299 aaagatggagtcttggagcaaaagaaataagaattagagctgattcatgccaaaa 353  Q
    |||||| ||||||||||||||||||||  |||||| |||||||||| ||||||||    
T  15707638 aaagattgagtcttggagcaaaagaaaggagaattggagctgattcgtgccaaaa 15707584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 356 - 409
Target Start/End: Complemental strand, 48355880 - 48355827
Alignment:
Q  356 atgaagatctcatacaaaaatatcttgtgcaaagaatttgaagatcttgtacaa 409  Q
    ||||| |||||||||||||||||  | ||||||| |||||||||||||||||||    
T  48355880 atgaatatctcatacaaaaatattctatgcaaaggatttgaagatcttgtacaa 48355827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 299 - 386
Target Start/End: Complemental strand, 35964640 - 35964552
Alignment:
Q  299 aaagatggagtcttggagcaaaagaaataagaattagagctgattcatgccaaaatcat-gaagatctcatacaaaaatatcttgtgca 386  Q
    |||||| ||||||||||||||||||||  |||| | |||||||||  ||||||||  ||  ||||||| |||||||||||||| |||||    
T  35964640 aaagattgagtcttggagcaaaagaaaggagaactggagctgatttgtgccaaaaatataaaagatcttatacaaaaatatctggtgca 35964552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 299 - 387
Target Start/End: Original strand, 10204361 - 10204450
Alignment:
Q  299 aaagatggagtcttggagcaaaagaaataagaattagagctgattcatgccaaaatcat-gaagatctcatacaaaaatatcttgtgcaa 387  Q
    |||||| ||||||||||||||||||||  |||||| ||| ||| || ||||||||  ||  ||||||| |||||||||||| | ||||||    
T  10204361 aaagattgagtcttggagcaaaagaaaggagaattggagatgaatcgtgccaaaaatataaaagatcttatacaaaaatatatggtgcaa 10204450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0098 (Bit Score: 106; Significance: 7e-53; HSPs: 1)
Name: scaffold0098
Description:

Target: scaffold0098; HSP #1
Raw Score: 106; E-Value: 7e-53
Query Start/End: Original strand, 298 - 443
Target Start/End: Complemental strand, 44647 - 44502
Alignment:
Q  298 gaaagatggagtcttggagcaaaagaaataagaattagagctgattcatgccaaaatcatgaagatctcatacaaaaatatcttgtgcaaagaatttgaa 397  Q
    ||||||||||||||||||||||||||||  |||||| ||||| |||||||||||||| || |||||||||| ||||||||| ||||||||||||||||||    
T  44647 gaaagatggagtcttggagcaaaagaaaggagaattggagcttattcatgccaaaattataaagatctcatgcaaaaatatattgtgcaaagaatttgaa 44548  T
Q  398 gatcttgtacaaaaatataacaagtggcgcgccccttttgcccttt 443  Q
    |||||||| |||||||||||||||||||||||||||||| ||||||    
T  44547 gatcttgtgcaaaaatataacaagtggcgcgccccttttacccttt 44502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 98; Significance: 4e-48; HSPs: 31)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 298 - 443
Target Start/End: Original strand, 26138390 - 26138535
Alignment:
Q  298 gaaagatggagtcttggagcaaaagaaataagaattagagctgattcatgccaaaatcatgaagatctcatacaaaaatatcttgtgcaaagaatttgaa 397  Q
    ||||||||||||||||||||||||||||  |||||| ||||| |||| ||||||||  |||||||||| |||||||||||||||||||||| ||||||||    
T  26138390 gaaagatggagtcttggagcaaaagaaaggagaatttgagctaattcgtgccaaaaatatgaagatctgatacaaaaatatcttgtgcaaataatttgaa 26138489  T
Q  398 gatcttgtacaaaaatataacaagtggcgcgccccttttgcccttt 443  Q
    |||||||| |||||||||||||||||||| ||||||||| ||||||    
T  26138490 gatcttgtgcaaaaatataacaagtggcgggccccttttacccttt 26138535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 298 - 443
Target Start/End: Original strand, 26017635 - 26017781
Alignment:
Q  298 gaaagatggagtcttggagcaaaagaaata-agaattagagctgattcatgccaaaatcatgaagatctcatacaaaaatatcttgtgcaaagaatttga 396  Q
    |||||||||||||||||||||||| |||   |||||| ||||| |||| ||||||||  |||||||||| ||||||||||||||||||||||||||||||    
T  26017635 gaaagatggagtcttggagcaaaaaaaaaggagaattggagctaattcgtgccaaaaatatgaagatctgatacaaaaatatcttgtgcaaagaatttga 26017734  T
Q  397 agatcttgtacaaaaatataacaagtggcgcgccccttttgcccttt 443  Q
    ||||||||| ||||||||||||||||||||| |||||||| ||||||    
T  26017735 agatcttgtgcaaaaatataacaagtggcgcaccccttttacccttt 26017781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 298 - 443
Target Start/End: Original strand, 26157008 - 26157154
Alignment:
Q  298 gaaagatggagtcttggagcaaaagaaata-agaattagagctgattcatgccaaaatcatgaagatctcatacaaaaatatcttgtgcaaagaatttga 396  Q
    |||||||||||||||||||||||| |||   |||||| ||||| |||| ||||||||  |||||||||| ||||||||||||||||||||||||||||||    
T  26157008 gaaagatggagtcttggagcaaaaaaaaaggagaattggagctaattcgtgccaaaaatatgaagatctgatacaaaaatatcttgtgcaaagaatttga 26157107  T
Q  397 agatcttgtacaaaaatataacaagtggcgcgccccttttgcccttt 443  Q
    ||||||||| ||||||||||||||||||||| |||||||| ||||||    
T  26157108 agatcttgtgcaaaaatataacaagtggcgcaccccttttacccttt 26157154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 298 - 443
Target Start/End: Original strand, 25507320 - 25507465
Alignment:
Q  298 gaaagatggagtcttggagcaaaagaaataagaattagagctgattcatgccaaaatcatgaagatctcatacaaaaatatcttgtgcaaagaatttgaa 397  Q
    ||||||||||||||||||| ||||||||  |||||| |||||||||| ||||||||  |||||||| ||||| |||||||| ||||||||||||||||||    
T  25507320 gaaagatggagtcttggagaaaaagaaaggagaattggagctgattcgtgccaaaaatatgaagatatcatagaaaaatatattgtgcaaagaatttgaa 25507419  T
Q  398 gatcttgtacaaaaatataacaagtggcgcgccccttttgcccttt 443  Q
    |||||||| ||||||||||||||||||| |||| ||||| ||||||    
T  25507420 gatcttgtgcaaaaatataacaagtggcacgcctcttttacccttt 25507465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 299 - 416
Target Start/End: Complemental strand, 23575027 - 23574910
Alignment:
Q  299 aaagatggagtcttggagcaaaagaaataagaattagagctgattcatgccaaaatcatgaagatctcatacaaaaatatcttgtgcaaagaatttgaag 398  Q
    |||||| ||||||||||||| ||||||  |||||| |||||||||||||||||||  |||||||||| ||||||||||||||||||||||||||||||||    
T  23575027 aaagattgagtcttggagcagaagaaaggagaattggagctgattcatgccaaaaatatgaagatcttatacaaaaatatcttgtgcaaagaatttgaag 23574928  T
Q  399 atcttgtacaaaaatata 416  Q
    ||||||||| ||||||||    
T  23574927 atcttgtaccaaaatata 23574910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 339 - 443
Target Start/End: Original strand, 5398996 - 5399099
Alignment:
Q  339 tgattcatgccaaaatcatgaagatctcatacaaaaatatcttgtgcaaagaatttgaagatcttgtacaaaaatataacaagtggcgcgccccttttgc 438  Q
    |||||||||||||||  ||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||| | |||||||||||    
T  5398996 tgattcatgccaaaaatatgaagatctcatgcaaaaatatcttgtgcaaataatttgaagatcttgtacaaaaatataacaagtgg-gtgccccttttgc 5399094  T
Q  439 ccttt 443  Q
    |||||    
T  5399095 ccttt 5399099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 298 - 401
Target Start/End: Complemental strand, 18234192 - 18234089
Alignment:
Q  298 gaaagatggagtcttggagcaaaagaaataagaattagagctgattcatgccaaaatcatgaagatctcatacaaaaatatcttgtgcaaagaatttgaa 397  Q
    ||||||||||||||||||||||| ||||  |||||| |||||||||||||||||||  | ||||||||||||||||||||||||||||||||||||||||    
T  18234192 gaaagatggagtcttggagcaaaggaaaagagaattggagctgattcatgccaaaaatacgaagatctcatacaaaaatatcttgtgcaaagaatttgaa 18234093  T
Q  398 gatc 401  Q
    ||||    
T  18234092 gatc 18234089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 299 - 416
Target Start/End: Complemental strand, 23517702 - 23517585
Alignment:
Q  299 aaagatggagtcttggagcaaaagaaataagaattagagctgattcatgccaaaatcatgaagatctcatacaaaaatatcttgtgcaaagaatttgaag 398  Q
    |||||| ||||||||||||||||||||  | |||| ||||||||||||| |||||  |||||||||| |||||||||||| |||||||||||||||||||    
T  23517702 aaagattgagtcttggagcaaaagaaaggataattggagctgattcatgtcaaaaatatgaagatcttatacaaaaatattttgtgcaaagaatttgaag 23517603  T
Q  399 atcttgtacaaaaatata 416  Q
    ||||||||| ||||||||    
T  23517602 atcttgtaccaaaatata 23517585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 307 - 416
Target Start/End: Original strand, 17739358 - 17739467
Alignment:
Q  307 agtcttggagcaaaagaaataagaattagagctgattcatgccaaaatcatgaagatctcatacaaaaatatcttgtgcaaagaatttgaagatcttgta 406  Q
    |||||||||||||||||||  |||||| ||| | |||||||||||||  |||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  17739358 agtcttggagcaaaagaaaggagaattggagttaattcatgccaaaaatatgaagatctcatacaaaaatatcttgtgcaaagaaattgaagatcttgta 17739457  T
Q  407 caaaaatata 416  Q
    |  |||||||    
T  17739458 ccgaaatata 17739467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 299 - 432
Target Start/End: Complemental strand, 17284414 - 17284281
Alignment:
Q  299 aaagatggagtcttggagcaaaagaaataagaattagagctgattcatgccaaaatcatgaa-gatctcatacaaaaatatcttgtgcaaagaatttgaa 397  Q
    |||||| ||||||| ||||||||||||| |||||| |||||||||| ||| ||||  || || ||||| |||||||||||||| ||||||||||||||||    
T  17284414 aaagattgagtcttagagcaaaagaaatgagaattggagctgattcgtgcaaaaaatataaaagatcttatacaaaaatatctggtgcaaagaatttgaa 17284315  T
Q  398 gatcttgtacaaaaatataacaagtggcgcgcccc 432  Q
    |||||||||||  ||||| | ||||||||||||||    
T  17284314 gatcttgtacattaatatca-aagtggcgcgcccc 17284281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 340 - 432
Target Start/End: Complemental strand, 5949959 - 5949867
Alignment:
Q  340 gattcatgccaaaatcatgaagatctcatacaaaa-atatcttgtgcaaagaatttgaagatcttgtacaaaaatataacaagtggcgcgcccc 432  Q
    ||||||||||||||  ||||||||||||||| ||| ||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||    
T  5949959 gattcatgccaaaaatatgaagatctcataccaaatatatcttgtgcaaagaatttgaagatcttgtacaataatataa-aagtggcgcgcccc 5949867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 340 - 430
Target Start/End: Original strand, 29253753 - 29253842
Alignment:
Q  340 gattcatgccaaaatcatgaagatctcatacaaaaatatcttgtgcaaagaatttgaagatcttgtacaaaaatataacaagtggcgcgcc 430  Q
    |||||||| |||||  ||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||| | ||||||||||||    
T  29253753 gattcatgtcaaaaatatgaagatctcataccaaaatatcttgtgcaaagaatttgaagatcttgtacaataatatga-aagtggcgcgcc 29253842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 356 - 432
Target Start/End: Original strand, 25949102 - 25949177
Alignment:
Q  356 atgaagatctcatacaaaaatatcttgtgcaaagaatttgaagatcttgtacaaaaatataacaagtggcgcgcccc 432  Q
    ||||| |||||||||||||||||| |||||||||||||||||||||||||||||| |||| ||||| ||||||||||    
T  25949102 atgaatatctcatacaaaaatatcatgtgcaaagaatttgaagatcttgtacaaatatat-acaagaggcgcgcccc 25949177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 298 - 390
Target Start/End: Original strand, 29253662 - 29253754
Alignment:
Q  298 gaaagatggagtcttggagcaaaagaaataagaattagagctgattcatgccaaaatcatgaagatctcatacaaaaatatcttgtgcaaaga 390  Q
    ||||||||||||||||||||||||||||  | |||| |||||||||| ||||||||  ||||||||||| ||||||||||| | |||||||||    
T  29253662 gaaagatggagtcttggagcaaaagaaaggataattggagctgattcgtgccaaaaatatgaagatctcgtacaaaaatatatggtgcaaaga 29253754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 298 - 401
Target Start/End: Complemental strand, 12660836 - 12660733
Alignment:
Q  298 gaaagatggagtcttggagcaaaagaaataagaattagagctgattcatgccaaaatcatgaagatctcatacaaaaatatcttgtgcaaagaatttgaa 397  Q
    ||||||| ||||||||||||||||||||  ||| || |||||||||  ||||||||  || ||||||| ||| |||||||||||| ||||||||||||||    
T  12660836 gaaagattgagtcttggagcaaaagaaaggagatttggagctgatttgtgccaaaaatataaagatcttatataaaaatatcttgggcaaagaatttgaa 12660737  T
Q  398 gatc 401  Q
    ||||    
T  12660736 gatc 12660733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 306 - 401
Target Start/End: Complemental strand, 18399998 - 18399903
Alignment:
Q  306 gagtcttggagcaaaagaaataagaattagagctgattcatgccaaaatcatgaagatctcatacaaaaatatcttgtgcaaagaatttgaagatc 401  Q
    ||||||||||| ||||||||  | |||||||||||||||  |||||||  |||||||||| ||||||||||||||||||||||||| ||| |||||    
T  18399998 gagtcttggagaaaaagaaaggataattagagctgattccggccaaaaatatgaagatctaatacaaaaatatcttgtgcaaagaaattgtagatc 18399903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 356 - 429
Target Start/End: Original strand, 25963702 - 25963774
Alignment:
Q  356 atgaagatctcatacaaaaatatcttgtgcaaagaatttgaagatcttgtacaaaaatataacaagtggcgcgc 429  Q
    ||||| ||||||||||||||||||||||||||||||||||||||| ||||||||| |||| ||||| |||||||    
T  25963702 atgaatatctcatacaaaaatatcttgtgcaaagaatttgaagatattgtacaaatatat-acaagaggcgcgc 25963774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 356 - 429
Target Start/End: Original strand, 25968349 - 25968421
Alignment:
Q  356 atgaagatctcatacaaaaatatcttgtgcaaagaatttgaagatcttgtacaaaaatataacaagtggcgcgc 429  Q
    ||||| ||||||||||||||||||||||||||||||||||||||| ||||||||| |||| ||||| |||||||    
T  25968349 atgaatatctcatacaaaaatatcttgtgcaaagaatttgaagatattgtacaaatatat-acaagaggcgcgc 25968421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 298 - 390
Target Start/End: Complemental strand, 5950050 - 5949958
Alignment:
Q  298 gaaagatggagtcttggagcaaaagaaataagaattagagctgattcatgccaaaatcatgaagatctcatacaaaaatatcttgtgcaaaga 390  Q
    |||||||||||||||| |||||||||||  |||||| ||||| |||||||||||||  || |||||||||| |||||| || |||||||||||    
T  5950050 gaaagatggagtcttgaagcaaaagaaaggagaattggagcttattcatgccaaaaatataaagatctcatgcaaaaaaatattgtgcaaaga 5949958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 356 - 416
Target Start/End: Original strand, 32543037 - 32543097
Alignment:
Q  356 atgaagatctcatacaaaaatatcttgtgcaaagaatttgaagatcttgtacaaaaatata 416  Q
    ||||| |||||||||||||||||| |||||||||||||||||||||||||||||| |||||    
T  32543037 atgaatatctcatacaaaaatatcatgtgcaaagaatttgaagatcttgtacaaatatata 32543097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 298 - 387
Target Start/End: Original strand, 5398905 - 5398995
Alignment:
Q  298 gaaagatggagtctt-ggagcaaaagaaataagaattagagctgattcatgccaaaatcatgaagatctcatacaaaaatatcttgtgcaa 387  Q
    ||||||||||||||| |||||||||||||  |||| |   ||| |||||||||||||  ||||||||||||||||||||||||||||||||    
T  5398905 gaaagatggagtctttggagcaaaagaaaggagaaatgttgcttattcatgccaaaaatatgaagatctcatacaaaaatatcttgtgcaa 5398995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 307 - 401
Target Start/End: Complemental strand, 13217664 - 13217570
Alignment:
Q  307 agtcttggagcaaaagaaataagaattagagctgattcatgccaaaatcatgaagatctcatacaaaaatatcttgtgcaaagaatttgaagatc 401  Q
    |||||||||||||||||||  ||| ||| ||||||||  ||||||||  |||||||||| |||||||||||||||||| ||| | ||||||||||    
T  13217664 agtcttggagcaaaagaaaggagatttacagctgatttgtgccaaaaatatgaagatcttatacaaaaatatcttgtgtaaaaagtttgaagatc 13217570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 299 - 387
Target Start/End: Original strand, 25948995 - 25949084
Alignment:
Q  299 aaagatggagtcttggagcaaaagaaataagaattagagctgattcatgccaaaatcat-gaagatctcatacaaaaatatcttgtgcaa 387  Q
    |||||| ||||||||||||||||||||  |||||| ||| |||||| ||||||||  ||  ||||||| |||||||||||||| ||||||    
T  25948995 aaagattgagtcttggagcaaaagaaaggagaattggagttgattcgtgccaaaaatataaaagatcttatacaaaaatatctagtgcaa 25949084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 299 - 387
Target Start/End: Original strand, 25963595 - 25963684
Alignment:
Q  299 aaagatggagtcttggagcaaaagaaataagaattagagctgattcatgccaaaatcat-gaagatctcatacaaaaatatcttgtgcaa 387  Q
    |||||| ||||||| ||||||||||||  |||||| |||||||||| ||||||||  ||  ||||||| |||||||||||||| ||||||    
T  25963595 aaagattgagtcttagagcaaaagaaaggagaattggagctgattcgtgccaaaaatataaaagatcttatacaaaaatatctagtgcaa 25963684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 299 - 387
Target Start/End: Original strand, 25968242 - 25968331
Alignment:
Q  299 aaagatggagtcttggagcaaaagaaataagaattagagctgattcatgccaaaatcat-gaagatctcatacaaaaatatcttgtgcaa 387  Q
    |||||| ||||||| ||||||||||||  |||||| |||||||||| ||||||||  ||  ||||||| |||||||||||||| ||||||    
T  25968242 aaagattgagtcttagagcaaaagaaaggagaattggagctgattcgtgccaaaaatataaaagatcttatacaaaaatatctagtgcaa 25968331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 298 - 382
Target Start/End: Complemental strand, 12658344 - 12658260
Alignment:
Q  298 gaaagatggagtcttggagcaaaagaaataagaattagagctgattcatgccaaaatcatgaagatctcatacaaaaatatcttg 382  Q
    ||||||| ||||||||||||||||||||  ||| || |||||||||  ||||||||  || ||||||| ||| ||||||||||||    
T  12658344 gaaagattgagtcttggagcaaaagaaaggagatttggagctgatttgtgccaaaaatataaagatcttatataaaaatatcttg 12658260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 298 - 353
Target Start/End: Original strand, 20222194 - 20222249
Alignment:
Q  298 gaaagatggagtcttggagcaaaagaaataagaattagagctgattcatgccaaaa 353  Q
    ||||||| ||||||||||||||||||||| ||| || ||||||||| | |||||||    
T  20222194 gaaagattgagtcttggagcaaaagaaatgagatttggagctgattgaggccaaaa 20222249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 298 - 353
Target Start/End: Original strand, 22116178 - 22116233
Alignment:
Q  298 gaaagatggagtcttggagcaaaagaaataagaattagagctgattcatgccaaaa 353  Q
    ||||||| ||||||||||||||||||||| ||| || ||||||||| | |||||||    
T  22116178 gaaagattgagtcttggagcaaaagaaatgagatttggagctgattgaggccaaaa 22116233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 299 - 344
Target Start/End: Original strand, 3923381 - 3923426
Alignment:
Q  299 aaagatggagtcttggagcaaaagaaataagaattagagctgattc 344  Q
    |||||| ||||||||||||||||||||| ||| || ||||||||||    
T  3923381 aaagattgagtcttggagcaaaagaaatgagatttggagctgattc 3923426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 307 - 387
Target Start/End: Original strand, 32542938 - 32543019
Alignment:
Q  307 agtcttggagcaaaagaaataagaattagagctgattcatgccaaaatcat-gaagatctcatacaaaaatatcttgtgcaa 387  Q
    |||||||||||||||||||  |||||| ||||| |||| ||||||||  ||  ||||||| | |||||||||||| ||||||    
T  32542938 agtcttggagcaaaagaaaggagaattggagctaattcgtgccaaaaatataaaagatcttacacaaaaatatctggtgcaa 32543019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 299 - 363
Target Start/End: Original strand, 20464003 - 20464067
Alignment:
Q  299 aaagatggagtcttggagcaaaagaaataagaattagagctgattcatgccaaaatcatgaagat 363  Q
    |||||| ||||||||||||||||||||  ||| || ||||||||||  |||||||  ||||||||    
T  20464003 aaagattgagtcttggagcaaaagaaaggagatttggagctgattcgggccaaaaatatgaagat 20464067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 91; Significance: 6e-44; HSPs: 22)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 298 - 432
Target Start/End: Original strand, 22038605 - 22038738
Alignment:
Q  298 gaaagatggagtcttggagcaaaagaaataagaattagagctgattcatgccaaaatcatgaagatctcatacaaaaatatcttgtgcaaagaatttgaa 397  Q
    ||||||||||||||||||||||||||||  |||||| |||||  ||||||||||||  ||||| |||||||||||||||||||||||||||||||||| |    
T  22038605 gaaagatggagtcttggagcaaaagaaaggagaattggagcttgttcatgccaaaaatatgaa-atctcatacaaaaatatcttgtgcaaagaatttgga 22038703  T
Q  398 gatcttgtacaaaaatataacaagtggcgcgcccc 432  Q
    |||||||||||||||||||||||||| ||||||||    
T  22038704 gatcttgtacaaaaatataacaagtgacgcgcccc 22038738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 298 - 401
Target Start/End: Complemental strand, 34053982 - 34053879
Alignment:
Q  298 gaaagatggagtcttggagcaaaagaaataagaattagagctgattcatgccaaaatcatgaagatctcatacaaaaatatcttgtgcaaagaatttgaa 397  Q
    ||||||||||||||||||| ||| ||||| |||||| |||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||    
T  34053982 gaaagatggagtcttggagaaaaggaaatgagaattggagctgattcatgccaaaaatatgaagatctcatacaaaaatatcttgtgcaaagaatttgaa 34053883  T
Q  398 gatc 401  Q
    ||||    
T  34053882 gatc 34053879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 367 - 443
Target Start/End: Original strand, 13601521 - 13601597
Alignment:
Q  367 atacaaaaatatcttgtgcaaagaatttgaagatcttgtacaaaaatataacaagtggcgcgccccttttgcccttt 443  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||    
T  13601521 atacaaaaatatcttgtgcaaagaatttgaagatcttgtgcaaaaatataacaagtggcgcgccccttttacccttt 13601597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 356 - 432
Target Start/End: Complemental strand, 14495107 - 14495032
Alignment:
Q  356 atgaagatctcatacaaaaatatcttgtgcaaagaatttgaagatcttgtacaaaaatataacaagtggcgcgcccc 432  Q
    ||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  14495107 atgaatatctcatacaaaaatatcctgtgcaaagaatttgaagatcttgtacaaaaatataa-aagtggcgcgcccc 14495032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 299 - 407
Target Start/End: Original strand, 17022964 - 17023072
Alignment:
Q  299 aaagatggagtcttggagcaaaagaaataagaattagagctgattcatgccaaaatcatgaagatctcatacaaaaatatcttgtgcaaagaatttgaag 398  Q
    |||||| |||| || ||||||||||||| |||||| |||||||||  ||||||||  | |||||||||| ||||||||||||||||||||||||| ||||    
T  17022964 aaagattgagtattagagcaaaagaaatgagaattggagctgatttgtgccaaaaataagaagatctcacacaaaaatatcttgtgcaaagaattagaag 17023063  T
Q  399 atcttgtac 407  Q
    |||||||||    
T  17023064 atcttgtac 17023072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 312 - 407
Target Start/End: Complemental strand, 20225615 - 20225520
Alignment:
Q  312 tggagcaaaagaaataagaattagagctgattcatgccaaaatcatgaagatctcatacaaaaatatcttgtgcaaagaatttgaagatcttgtac 407  Q
    ||||||||||||||  |||||| |||||||||| ||||||||  |||||||||||| |||||||||||||||  |||||||| |||||||||||||    
T  20225615 tggagcaaaagaaaggagaattggagctgattcttgccaaaaatatgaagatctcacacaaaaatatcttgtataaagaattagaagatcttgtac 20225520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 356 - 432
Target Start/End: Original strand, 11398668 - 11398743
Alignment:
Q  356 atgaagatctcatacaaaaatatcttgtgcaaagaatttgaagatcttgtacaaaaatataacaagtggcgcgcccc 432  Q
    ||||| |||||||||||||||||| |||||||||||||||||||||||||||||| |||| ||||| ||||||||||    
T  11398668 atgaatatctcatacaaaaatatcatgtgcaaagaatttgaagatcttgtacaaatatat-acaagaggcgcgcccc 11398743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 298 - 390
Target Start/End: Complemental strand, 19567416 - 19567325
Alignment:
Q  298 gaaagatggagtcttggagcaaaagaaataagaattagagctgattcatgccaaaatcatgaagatctcatacaaaaatatcttgtgcaaaga 390  Q
    ||||||||||||||||||||||||||||  |||||| ||||| |||||||||||||  || |||||||||| ||||||||| |||||||||||    
T  19567416 gaaagatggagtcttggagcaaaagaaaggagaattggagcttattcatgccaaaa-aataaagatctcatgcaaaaatatattgtgcaaaga 19567325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 298 - 390
Target Start/End: Complemental strand, 25766110 - 25766018
Alignment:
Q  298 gaaagatggagtcttggagcaaaagaaataagaattagagctgattcatgccaaaatcatgaagatctcatacaaaaatatcttgtgcaaaga 390  Q
    |||||||||||||||| |||||||||||  |||||| ||||| |||||||||||||  || |||||||||| ||||||||| |||||||||||    
T  25766110 gaaagatggagtcttgaagcaaaagaaaggagaattggagcttattcatgccaaaaatataaagatctcatgcaaaaatatattgtgcaaaga 25766018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 356 - 431
Target Start/End: Original strand, 36075974 - 36076048
Alignment:
Q  356 atgaagatctcatacaaaaatatcttgtgcaaagaatttgaagatcttgtacaaaaatataacaagtggcgcgccc 431  Q
    ||||| |||||||||||||||||| |||||||||||||||||||||||||||||| |||| ||||| |||||||||    
T  36075974 atgaatatctcatacaaaaatatcatgtgcaaagaatttgaagatcttgtacaaatatat-acaagaggcgcgccc 36076048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 340 - 430
Target Start/End: Complemental strand, 19567326 - 19567237
Alignment:
Q  340 gattcatgccaaaatcatgaagatctcatacaaaaatatcttgtgcaaagaatttgaagatcttgtacaaaaatataacaagtggcgcgcc 430  Q
    ||||||||||||||  || ||||||| |||| |||||||||||||||||||||| ||||||||||||||| ||||||| |||||| |||||    
T  19567326 gattcatgccaaaaatattaagatctgataccaaaatatcttgtgcaaagaattcgaagatcttgtacaataatataa-aagtggtgcgcc 19567237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 298 - 387
Target Start/End: Original strand, 13601414 - 13601503
Alignment:
Q  298 gaaagatggagtcttggagcaaaagaaataagaattagagctgattcatgccaaaatcatgaagatctcatacaaaaatatcttgtgcaa 387  Q
    ||||||||||||||||||||||||||||  |||||| ||||| |||||||||||||  || ||||||| || ||||||||| ||||||||    
T  13601414 gaaagatggagtcttggagcaaaagaaaggagaattggagcttattcatgccaaaaatataaagatcttatgcaaaaatatattgtgcaa 13601503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 356 - 432
Target Start/End: Complemental strand, 14661075 - 14661000
Alignment:
Q  356 atgaagatctcatacaaaaatatcttgtgcaaagaatttgaagatcttgtacaaaaatataacaagtggcgcgcccc 432  Q
    ||||| |||||||||||||||||| ||| | ||||||||||||||||||||||| ||||||| ||||||||||||||    
T  14661075 atgaatatctcatacaaaaatatcatgtacgaagaatttgaagatcttgtacaataatataa-aagtggcgcgcccc 14661000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 356 - 432
Target Start/End: Original strand, 25054814 - 25054889
Alignment:
Q  356 atgaagatctcatacaaaaatatcttgtgcaaagaatttgaagatcttgtacaaaaatataacaagtggcgcgcccc 432  Q
    ||||| |||||||||||||||||  |||||||||||||||||||||||||||||| |||| ||||| ||||||||||    
T  25054814 atgaatatctcatacaaaaatattatgtgcaaagaatttgaagatcttgtacaaatatat-acaagaggcgcgcccc 25054889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 299 - 387
Target Start/End: Complemental strand, 14495214 - 14495125
Alignment:
Q  299 aaagatggagtcttggagcaaaagaaataagaattagagctgattcatgccaaaatcat-gaagatctcatacaaaaatatcttgtgcaa 387  Q
    |||||| ||||||||||||||||||||  |||||| |||||||||||||||||||  ||  ||||||| |||||||||||||| ||||||    
T  14495214 aaagattgagtcttggagcaaaagaaacgagaattggagctgattcatgccaaaaatataaaagatcttatacaaaaatatctggtgcaa 14495125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 356 - 415
Target Start/End: Complemental strand, 3245343 - 3245284
Alignment:
Q  356 atgaagatctcatacaaaaatatcttgtgcaaagaatttgaagatcttgtacaaaaatat 415  Q
    ||||| |||||||||||||||||| | |||||||||||||||||||||||||||| ||||    
T  3245343 atgaatatctcatacaaaaatatcatatgcaaagaatttgaagatcttgtacaaatatat 3245284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 299 - 387
Target Start/End: Complemental strand, 14661182 - 14661093
Alignment:
Q  299 aaagatggagtcttggagcaaaagaaataagaattagagctgattcatgccaaaatcat-gaagatctcatacaaaaatatcttgtgcaa 387  Q
    |||||| ||||||||||||||||||||  |||||| |||||||||| ||||||||  ||  ||||||| |||||||||||||| ||||||    
T  14661182 aaagattgagtcttggagcaaaagaaaggagaattggagctgattcgtgccaaaaatataaaagatcttatacaaaaatatctggtgcaa 14661093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 299 - 387
Target Start/End: Complemental strand, 3250474 - 3250385
Alignment:
Q  299 aaagatggagtcttggagcaaaagaaataagaattagagctgattcatgccaaaatcat-gaagatctcatacaaaaatatcttgtgcaa 387  Q
    |||||| ||||||||||||||||||||  |||||| |||||||||| ||||||||  ||  ||||||| |||||||||||| | ||||||    
T  3250474 aaagattgagtcttggagcaaaagaaaggagaattggagctgattcgtgccaaaaatataaaagatcttatacaaaaatatatggtgcaa 3250385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 369 - 415
Target Start/End: Complemental strand, 3250375 - 3250329
Alignment:
Q  369 acaaaaatatcttgtgcaaagaatttgaagatcttgtacaaaaatat 415  Q
    ||||||||||| | |||||||||||||||||||||||||||| ||||    
T  3250375 acaaaaatatcatatgcaaagaatttgaagatcttgtacaaatatat 3250329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 301 - 387
Target Start/End: Original strand, 11398564 - 11398651
Alignment:
Q  301 agatggagtcttggagcaaaagaaataagaattagagctgattcatgccaaaatcat-gaagatctcatacaaaaatatcttgtgcaa 387  Q
    |||| ||||||||||||||||||||  |||||| ||||| |||| ||||||||  ||  ||||||| ||||||||||| || ||||||    
T  11398564 agattgagtcttggagcaaaagaaaggagaattggagctaattcgtgccaaaaatataaaagatcttatacaaaaatacctggtgcaa 11398651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 299 - 353
Target Start/End: Complemental strand, 3245450 - 3245396
Alignment:
Q  299 aaagatggagtcttggagcaaaagaaataagaattagagctgattcatgccaaaa 353  Q
    |||||| ||||||||||| ||||||||  |||||| |||||||||| ||||||||    
T  3245450 aaagattgagtcttggagtaaaagaaaggagaattggagctgattcgtgccaaaa 3245396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 299 - 353
Target Start/End: Original strand, 25054705 - 25054759
Alignment:
Q  299 aaagatggagtcttggagcaaaagaaataagaattagagctgattcatgccaaaa 353  Q
    |||||| ||||||||||||||||||||  |||||| ||||| |||| ||||||||    
T  25054705 aaagattgagtcttggagcaaaagaaaggagaattggagctaattcgtgccaaaa 25054759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0264 (Bit Score: 89; Significance: 1e-42; HSPs: 1)
Name: scaffold0264
Description:

Target: scaffold0264; HSP #1
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 298 - 443
Target Start/End: Complemental strand, 22775 - 22626
Alignment:
Q  298 gaaagatggagtcttggagcaaaagaaataagaattagagctgattcatgccaaaatcatgaagatctcata----caaaaatatcttgtgcaaagaatt 393  Q
    ||||||||||||||| ||||||||||||  ||| || ||||||||||||| |||||  ||||||||||||||    ||||||||||||||||||||||||    
T  22775 gaaagatggagtctttgagcaaaagaaaggagatttggagctgattcatgtcaaaaatatgaagatctcatatatacaaaaatatcttgtgcaaagaatt 22676  T
Q  394 tgaagatcttgtacaaaaatataacaagtggcgcgccccttttgcccttt 443  Q
    ||||||| |||||||||||||||||||||| ||||||| |||||||||||    
T  22675 tgaagatattgtacaaaaatataacaagtgacgcgcccattttgcccttt 22626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 84; Significance: 1e-39; HSPs: 2)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 340 - 443
Target Start/End: Original strand, 49652 - 49755
Alignment:
Q  340 gattcatgccaaaatcatgaagatctcatacaaaaatatcttgtgcaaagaatttgaagatcttgtacaaaaatataacaagtggcgcgccccttttgcc 439  Q
    |||||||| |||||  ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  49652 gattcatgtcaaaaatatgaagatctcatacgaaaatatcttgtgcaaagaatttgaagatcttgtacaaaaatataacaagtggcgcgccctttttgcc 49751  T
Q  440 cttt 443  Q
    ||||    
T  49752 cttt 49755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012; HSP #2
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 298 - 387
Target Start/End: Original strand, 49561 - 49650
Alignment:
Q  298 gaaagatggagtcttggagcaaaagaaataagaattagagctgattcatgccaaaatcatgaagatctcatacaaaaatatcttgtgcaa 387  Q
    |||||||||||||||||||||||||||||||||||| ||||| |||||||||||||  ||||||||||||| ||||||||| ||||||||    
T  49561 gaaagatggagtcttggagcaaaagaaataagaattggagcttattcatgccaaaaatatgaagatctcatgcaaaaatatattgtgcaa 49650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 79; Significance: 9e-37; HSPs: 14)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 342 - 432
Target Start/End: Complemental strand, 20104251 - 20104161
Alignment:
Q  342 ttcatgccaaaatcatgaagatctcatacaaaaatatcttgtgcaaagaatttgaagatcttgtacaaaaatataacaagtggcgcgcccc 432  Q
    ||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  20104251 ttcatgccaaaaatatgaagatctcatacaaaaatatcttgtgcaaagaatttgaagatcttatacaaaaatataacaagtggcgcgcccc 20104161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 307 - 416
Target Start/End: Complemental strand, 2953895 - 2953786
Alignment:
Q  307 agtcttggagcaaaagaaataagaattagagctgattcatgccaaaatcatgaagatctcatacaaaaatatcttgtgcaaagaatttgaagatcttgta 406  Q
    ||||||||| |||||||||  |||||| |||||||||| ||||||||  |||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  2953895 agtcttggaacaaaagaaaggagaattggagctgattcgtgccaaaaatatgaagatctcatacaaaaatatcttgtgcaaagaaattgaagatcttgta 2953796  T
Q  407 caaaaatata 416  Q
    | | ||||||    
T  2953795 ccagaatata 2953786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 298 - 387
Target Start/End: Complemental strand, 20104344 - 20104255
Alignment:
Q  298 gaaagatggagtcttggagcaaaagaaataagaattagagctgattcatgccaaaatcatgaagatctcatacaaaaatatcttgtgcaa 387  Q
    ||||||||||||||||||||||||||||  ||||||| |||| ||| |||||||||  ||||||||||||||||||||||||||||||||    
T  20104344 gaaagatggagtcttggagcaaaagaaaggagaattatagcttattgatgccaaaaatatgaagatctcatacaaaaatatcttgtgcaa 20104255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 356 - 432
Target Start/End: Original strand, 15059232 - 15059307
Alignment:
Q  356 atgaagatctcatacaaaaatatcttgtgcaaagaatttgaagatcttgtacaaaaatataacaagtggcgcgcccc 432  Q
    ||||| |||||||||||||||||| ||||||||||||||||||||||||||||| ||||||| ||||||| ||||||    
T  15059232 atgaatatctcatacaaaaatatcatgtgcaaagaatttgaagatcttgtacaataatataa-aagtggcacgcccc 15059307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 356 - 431
Target Start/End: Complemental strand, 23343833 - 23343759
Alignment:
Q  356 atgaagatctcatacaaaaatatcttgtgcaaagaatttgaagatcttgtacaaaaatataacaagtggcgcgccc 431  Q
    ||||| |||||||||||||||||| ||||||||||||||||||||||||||||| ||||||| ||||||| |||||    
T  23343833 atgaatatctcatacaaaaatatcatgtgcaaagaatttgaagatcttgtacaataatataa-aagtggcacgccc 23343759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 346 - 416
Target Start/End: Original strand, 20738119 - 20738189
Alignment:
Q  346 tgccaaaatcatgaagatctcatacaaaaatatcttgtgcaaagaatttgaagatcttgtacaaaaatata 416  Q
    ||||||||  || ||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||    
T  20738119 tgccaaaaatataaagatctcatacaaaaatatcttgtgcaaagaaattgaagatcttgtacaagaatata 20738189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 367 - 432
Target Start/End: Original strand, 20967558 - 20967622
Alignment:
Q  367 atacaaaaatatcttgtgcaaagaatttgaagatcttgtacaaaaatataacaagtggcgcgcccc 432  Q
    ||||||||||||||| |||||||||||||||||||||||||||||| |||| ||||||||||||||    
T  20967558 atacaaaaatatcttatgcaaagaatttgaagatcttgtacaaaaacataa-aagtggcgcgcccc 20967622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 340 - 432
Target Start/End: Original strand, 21273407 - 21273498
Alignment:
Q  340 gattcatgccaaaatcatgaagatctcatacaaaaatatcttgtgcaaagaatttgaagatcttgtacaaaaatataacaagtggcgcgcccc 432  Q
    ||||||||||||||  ||||||||||||||| || |||| ||||| |||||||||||| |||||| |||| ||||||| ||||||||||||||    
T  21273407 gattcatgccaaaaatatgaagatctcataccaatatatgttgtgtaaagaatttgaatatcttgcacaataatataa-aagtggcgcgcccc 21273498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 298 - 401
Target Start/End: Original strand, 16676806 - 16676909
Alignment:
Q  298 gaaagatggagtcttggagcaaaagaaataagaattagagctgattcatgccaaaatcatgaagatctcatacaaaaatatcttgtgcaaagaatttgaa 397  Q
    ||||||| ||||||||||||||||||||   || ||  ||||||||  ||||||||  |||||||||| |||||||||||||||||||||| | ||||||    
T  16676806 gaaagattgagtcttggagcaaaagaaaagggatttgaagctgatttgtgccaaaaatatgaagatcttatacaaaaatatcttgtgcaaaaagtttgaa 16676905  T
Q  398 gatc 401  Q
    ||||    
T  16676906 gatc 16676909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 298 - 387
Target Start/End: Complemental strand, 25486098 - 25486009
Alignment:
Q  298 gaaagatggagtcttggagcaaaagaaataagaattagagctgattcatgccaaaatcatgaagatctcatacaaaaatatcttgtgcaa 387  Q
    ||||||||||||||| ||||||||||||  |||||| ||||| |||||| ||||||  || |||||||||| ||||||||| ||||||||    
T  25486098 gaaagatggagtctttgagcaaaagaaaggagaattggagcttattcataccaaaaatataaagatctcatgcaaaaatatattgtgcaa 25486009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 299 - 387
Target Start/End: Original strand, 20967440 - 20967529
Alignment:
Q  299 aaagatggagtcttggagcaaaagaaataagaattagagctgattcatgccaaaatcat-gaagatctcatacaaaaatatcttgtgcaa 387  Q
    |||||| ||||||||||||||||||||  |||||| |||||||||| ||||||||  ||  ||||||| |||||||||||||| ||||||    
T  20967440 aaagattgagtcttggagcaaaagaaaggagaattggagctgattcgtgccaaaaatataaaagatcttatacaaaaatatctggtgcaa 20967529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 299 - 387
Target Start/End: Original strand, 15059125 - 15059214
Alignment:
Q  299 aaagatggagtcttggagcaaaagaaataagaattagagctgattcatgccaaaatcat-gaagatctcatacaaaaatatcttgtgcaa 387  Q
    |||||| ||||||||||||||||||||  |||||| |||||||||| || |||||  ||  ||||||| | |||||||||||| ||||||    
T  15059125 aaagattgagtcttggagcaaaagaaaggagaattggagctgattcgtgtcaaaaatataaaagatcttacacaaaaatatctggtgcaa 15059214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 299 - 387
Target Start/End: Complemental strand, 23343940 - 23343851
Alignment:
Q  299 aaagatggagtcttggagcaaaagaaataagaattagagctgattcatgccaaaatcat-gaagatctcatacaaaaatatcttgtgcaa 387  Q
    |||||| ||||||||||||||||||||  |||||| |||||||| | ||||||||  ||  ||||| | | |||||||||||||||||||    
T  23343940 aaagattgagtcttggagcaaaagaaaggagaattggagctgatgcgtgccaaaaatataaaagattttacacaaaaatatcttgtgcaa 23343851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 298 - 379
Target Start/End: Original strand, 24164708 - 24164789
Alignment:
Q  298 gaaagatggagtcttggagcaaaagaaataagaattagagctgattcatgccaaaatcatgaagatctcatacaaaaatatc 379  Q
    ||||||| ||||||||||||||||||||  ||| || ||| ||||| | |||||||  ||||||||||  | ||||||||||    
T  24164708 gaaagattgagtcttggagcaaaagaaaggagatttggagatgattgaagccaaaaatatgaagatcttgtgcaaaaatatc 24164789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 77; Significance: 1e-35; HSPs: 22)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 339 - 443
Target Start/End: Original strand, 8648624 - 8648728
Alignment:
Q  339 tgattcatgccaaaatcatgaagatctcatacaaaaatatcttgtgcaaagaatttgaagatcttgtacaaaaatataacaagtggcgcgccccttttgc 438  Q
    |||||||||||||||  ||||||||||||| ||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||| ||||||| |    
T  8648624 tgattcatgccaaaaatatgaagatctcatgcaaaaatatattgtgcaaagaatttgaagatcttgtgcaaaaatataacaagtggcgcgacccttttac 8648723  T
Q  439 ccttt 443  Q
    |||||    
T  8648724 ccttt 8648728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 307 - 438
Target Start/End: Complemental strand, 39286973 - 39286843
Alignment:
Q  307 agtcttggagcaaaagaaataagaattagagctgattcatgccaaaatcatgaagatctcatacaaaaatatcttgtgcaaagaatttgaagatcttgta 406  Q
    |||||||||||||||||||  ||| || ||||| |||||||||||||  ||||||||||||| |||||| || |||||||||||||||| |||||||||     
T  39286973 agtcttggagcaaaagaaaggagatttggagcttattcatgccaaaaatatgaagatctcatgcaaaaa-atattgtgcaaagaatttggagatcttgtg 39286875  T
Q  407 caaaaatataacaagtggcgcgccccttttgc 438  Q
    |||||||||||||||||||||  |||||||||    
T  39286874 caaaaatataacaagtggcgcaacccttttgc 39286843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 298 - 436
Target Start/End: Complemental strand, 30819438 - 30819301
Alignment:
Q  298 gaaagatggagtcttggagcaaaagaaataagaattagagctgattcatgccaaaatcatgaagatctcatacaaaaatatcttgtgcaaagaatttgaa 397  Q
    ||||||| ||||||| ||||||||||||| |||||| |||||||||||||||||||  |||||||||| |||||||||||| |||||||||||| |||||    
T  30819438 gaaagattgagtcttagagcaaaagaaatgagaattggagctgattcatgccaaaaatatgaagatcttatacaaaaatatattgtgcaaagaaattgaa 30819339  T
Q  398 gatcttgtacaaaaatataacaagtggcgcgcccctttt 436  Q
    |||| |  || ||||||||| |  |||||||||||||||    
T  30819338 gatccttcaccaaaatataa-agatggcgcgcccctttt 30819301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 340 - 443
Target Start/End: Original strand, 20412019 - 20412122
Alignment:
Q  340 gattcatgccaaaatcatgaagatctcatacaaaaatatcttgtgcaaagaatttgaagatcttgtacaaaaatataacaagtggcgcgccccttttgcc 439  Q
    ||||||||| ||||  ||||||||||||||||||||||||| |||||||||| ||||||||||||| |||||||||||||||||| |||| |||||| ||    
T  20412019 gattcatgcaaaaaatatgaagatctcatacaaaaatatctggtgcaaagaaattgaagatcttgtgcaaaaatataacaagtggtgcgctccttttacc 20412118  T
Q  440 cttt 443  Q
    ||||    
T  20412119 cttt 20412122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 356 - 432
Target Start/End: Original strand, 44538041 - 44538116
Alignment:
Q  356 atgaagatctcatacaaaaatatcttgtgcaaagaatttgaagatcttgtacaaaaatataacaagtggcgcgcccc 432  Q
    ||||| |||||||||||||||||| ||||||||||||||||||||||||||||| ||||||| ||||||||||||||    
T  44538041 atgaatatctcatacaaaaatatcatgtgcaaagaatttgaagatcttgtacaataatataa-aagtggcgcgcccc 44538116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 298 - 387
Target Start/End: Original strand, 20411928 - 20412017
Alignment:
Q  298 gaaagatggagtcttggagcaaaagaaataagaattagagctgattcatgccaaaatcatgaagatctcatacaaaaatatcttgtgcaa 387  Q
    ||||||||||||||||||||||||||||  |||||| ||||| |||||||||||||  || |||||||||| ||||||||| ||||||||    
T  20411928 gaaagatggagtcttggagcaaaagaaacgagaattggagcttattcatgccaaaaatataaagatctcatgcaaaaatatattgtgcaa 20412017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 299 - 403
Target Start/End: Complemental strand, 16382448 - 16382344
Alignment:
Q  299 aaagatggagtcttggagcaaaagaaataagaattagagctgattcatgccaaaatcatgaagatctcatacaaaaatatcttgtgcaaagaatttgaag 398  Q
    |||||| ||||||||||||||||||||| ||| || |||||||||  ||||||||  ||||||||||  | ||||||||||||||||||| | |||||||    
T  16382448 aaagattgagtcttggagcaaaagaaatgagatttggagctgatttgtgccaaaaatatgaagatcttgtgcaaaaatatcttgtgcaaaaagtttgaag 16382349  T
Q  399 atctt 403  Q
    |||||    
T  16382348 atctt 16382344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 356 - 432
Target Start/End: Original strand, 17716529 - 17716604
Alignment:
Q  356 atgaagatctcatacaaaaatatcttgtgcaaagaatttgaagatcttgtacaaaaatataacaagtggcgcgcccc 432  Q
    ||||| |||||||||||||||||| |||||||||||||||||||||||||||||| |||| ||||| ||||||||||    
T  17716529 atgaatatctcatacaaaaatatcctgtgcaaagaatttgaagatcttgtacaaatatat-acaagaggcgcgcccc 17716604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 356 - 431
Target Start/End: Complemental strand, 52236162 - 52236088
Alignment:
Q  356 atgaagatctcatacaaaaatatcttgtgcaaagaatttgaagatcttgtacaaaaatataacaagtggcgcgccc 431  Q
    ||||| |||||||||||||||||| |||||||||||||||||||||||||||||| |||| ||||| |||||||||    
T  52236162 atgaatatctcatacaaaaatatcatgtgcaaagaatttgaagatcttgtacaaatatat-acaagaggcgcgccc 52236088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 299 - 403
Target Start/End: Complemental strand, 25405378 - 25405274
Alignment:
Q  299 aaagatggagtcttggagcaaaagaaataagaattagagctgattcatgccaaaatcatgaagatctcatacaaaaatatcttgtgcaaagaatttgaag 398  Q
    |||||| ||||||||||||||||||||  ||| || |||||||||  ||||||||  |||||||||| ||||| |||||||||||||||| | || ||||    
T  25405378 aaagattgagtcttggagcaaaagaaaggagatttggagctgatttgtgccaaaaatatgaagatcttatacagaaatatcttgtgcaaaaagttagaag 25405279  T
Q  399 atctt 403  Q
    |||||    
T  25405278 atctt 25405274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 307 - 452
Target Start/End: Original strand, 43998192 - 43998323
Alignment:
Q  307 agtcttggagcaaaagaaataagaattagagctgattcatgccaaaatcatgaagatctcatacaaaaatatcttgtgcaaagaatttgaagatcttgta 406  Q
    |||||||||||||||||||  |||||||||||| || ||||||||||  |||||||||||||               ||||||||||||||||||||||     
T  43998192 agtcttggagcaaaagaaaggagaattagagcttatccatgccaaaagtatgaagatctcat---------------gcaaagaatttgaagatcttgtg 43998276  T
Q  407 caaaaatataacaagtggcgcgccccttttgccc-tttgcttcttca 452  Q
    |||||||||| ||||||||||| ||||||| ||| ||||||||||||    
T  43998277 caaaaatatatcaagtggcgcgacccttttacccttttgcttcttca 43998323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 356 - 431
Target Start/End: Original strand, 16431345 - 16431419
Alignment:
Q  356 atgaagatctcatacaaaaatatcttgtgcaaagaatttgaagatcttgtacaaaaatataacaagtggcgcgccc 431  Q
    ||||| || ||||||||||||||| |||||||||||||||||||||||||||||| |||| ||||| |||||||||    
T  16431345 atgaatatttcatacaaaaatatcatgtgcaaagaatttgaagatcttgtacaaatatat-acaagaggcgcgccc 16431419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 309 - 387
Target Start/End: Original strand, 8648545 - 8648623
Alignment:
Q  309 tcttggagcaaaagaaataagaattagagctgattcatgccaaaatcatgaagatctcatacaaaaatatcttgtgcaa 387  Q
    |||||||||||||||||  |||||| ||||| |||||||||||||  ||||||||||||| ||||||||| ||||||||    
T  8648545 tcttggagcaaaagaaaggagaattggagcttattcatgccaaaaatatgaagatctcatgcaaaaatatattgtgcaa 8648623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 356 - 432
Target Start/End: Original strand, 48256089 - 48256164
Alignment:
Q  356 atgaagatctcatacaaaaatatcttgtgcaaagaatttgaagatcttgtacaaaaatataacaagtggcgcgcccc 432  Q
    ||||| |||||||||||||||||| ||||||||||||||||||| |||||||||| |||  ||||| ||||||||||    
T  48256089 atgaatatctcatacaaaaatatcatgtgcaaagaatttgaagaacttgtacaaatata-cacaagaggcgcgcccc 48256164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 356 - 415
Target Start/End: Complemental strand, 26134815 - 26134756
Alignment:
Q  356 atgaagatctcatacaaaaatatcttgtgcaaagaatttgaagatcttgtacaaaaatat 415  Q
    ||||| |||||||||||||||||  |||||||||||||||||||||||||||||| ||||    
T  26134815 atgaatatctcatacaaaaatattctgtgcaaagaatttgaagatcttgtacaaatatat 26134756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 299 - 387
Target Start/End: Original strand, 48255982 - 48256071
Alignment:
Q  299 aaagatggagtcttggagcaaaagaaataagaattagagctgattcatgccaaaatcat-gaagatctcatacaaaaatatcttgtgcaa 387  Q
    |||||| ||||||||||||||||||||  |||||||||| |||||| ||| ||||  ||  ||||||| |||||||||||||| ||||||    
T  48255982 aaagattgagtcttggagcaaaagaaaggagaattagagttgattcgtgcaaaaaatataaaagatcttatacaaaaatatctggtgcaa 48256071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 299 - 387
Target Start/End: Original strand, 16431238 - 16431327
Alignment:
Q  299 aaagatggagtcttggagcaaaagaaataagaattagagctgattcatgccaaaatcat-gaagatctcatacaaaaatatcttgtgcaa 387  Q
    |||||| | ||||||||||||||||||  |||||| |||||||||| ||||||||  ||  ||||||| |||||||||||| | ||||||    
T  16431238 aaagattgggtcttggagcaaaagaaaggagaattggagctgattcgtgccaaaaatataaaagatcttatacaaaaatatatggtgcaa 16431327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 299 - 387
Target Start/End: Original strand, 17716422 - 17716511
Alignment:
Q  299 aaagatggagtcttggagcaaaagaaataagaattagagctgattcatgccaaaatcat-gaagatctcatacaaaaatatcttgtgcaa 387  Q
    |||||| ||||||||||||||||||||   ||||| |||||||||| ||||||||  ||  ||||||| |||||||||||| | ||||||    
T  17716422 aaagattgagtcttggagcaaaagaaaggcgaattggagctgattcgtgccaaaaatataaaagatcttatacaaaaatatatggtgcaa 17716511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 299 - 387
Target Start/End: Original strand, 44537934 - 44538023
Alignment:
Q  299 aaagatggagtcttggagcaaaagaaataagaattagagctgattcatgccaaaatcat-gaagatctcatacaaaaatatcttgtgcaa 387  Q
    |||||| ||||||||||||||||||||  |||||| ||| ||| || ||||||||  ||  ||||||| |||||||||||||| ||||||    
T  44537934 aaagattgagtcttggagcaaaagaaaggagaattggagttgaatcgtgccaaaaatataaaagatcttatacaaaaatatctggtgcaa 44538023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 307 - 387
Target Start/End: Complemental strand, 52236261 - 52236180
Alignment:
Q  307 agtcttggagcaaaagaaataagaattagagctgattcatgccaaaatcat-gaagatctcatacaaaaatatcttgtgcaa 387  Q
    |||||||||||||||||||  |||||| |||||||||| ||||||||  ||  ||||||| |||||||||||| | ||||||    
T  52236261 agtcttggagcaaaagaaaggagaattggagctgattcgtgccaaaaatataaaagatcttatacaaaaatatttggtgcaa 52236180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 299 - 353
Target Start/End: Complemental strand, 26134922 - 26134868
Alignment:
Q  299 aaagatggagtcttggagcaaaagaaataagaattagagctgattcatgccaaaa 353  Q
    |||||| ||||||| ||||||||||||  |||||| |||||||||| ||||||||    
T  26134922 aaagattgagtcttagagcaaaagaaaggagaatttgagctgattcgtgccaaaa 26134868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 299 - 363
Target Start/End: Complemental strand, 20861179 - 20861115
Alignment:
Q  299 aaagatggagtcttggagcaaaagaaataagaattagagctgattcatgccaaaatcatgaagat 363  Q
    |||||| ||||||||||||||||||||| | | || ||||||||||  |||||||  ||||||||    
T  20861179 aaagattgagtcttggagcaaaagaaatgatattttgagctgattcgggccaaaaatatgaagat 20861115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 76; Significance: 6e-35; HSPs: 22)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 340 - 451
Target Start/End: Original strand, 10730915 - 10731026
Alignment:
Q  340 gattcatgccaaaatcatgaagatctcatacaaaaatatcttgtgcaaagaatttgaagatcttgtacaaaaatataacaagtggcgcgccccttttgcc 439  Q
    ||||||||||||||  |||||||||||||||||||||||||| |||||||||||| |||||||||| |||||||||||||||||||| ||||||||| ||    
T  10730915 gattcatgccaaaaatatgaagatctcatacaaaaatatcttatgcaaagaatttaaagatcttgtgcaaaaatataacaagtggcgtgccccttttacc 10731014  T
Q  440 ctttgcttcttc 451  Q
     |||||| ||||    
T  10731015 ttttgctgcttc 10731026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 340 - 451
Target Start/End: Original strand, 10944684 - 10944795
Alignment:
Q  340 gattcatgccaaaatcatgaagatctcatacaaaaatatcttgtgcaaagaatttgaagatcttgtacaaaaatataacaagtggcgcgccccttttgcc 439  Q
    ||||||||||||||  |||||||||||||||||||||||||| |||||||||||| |||||||||| |||||||||||||||||||| ||||||||| ||    
T  10944684 gattcatgccaaaaatatgaagatctcatacaaaaatatcttatgcaaagaatttaaagatcttgtgcaaaaatataacaagtggcgtgccccttttacc 10944783  T
Q  440 ctttgcttcttc 451  Q
     |||||| ||||    
T  10944784 ttttgctgcttc 10944795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 299 - 416
Target Start/End: Original strand, 38651866 - 38651983
Alignment:
Q  299 aaagatggagtcttggagcaaaagaaataagaattagagctgattcatgccaaaatcatgaagatctcatacaaaaatatcttgtgcaaagaatttgaag 398  Q
    |||||| ||||||||||||||||||||  |||||| |||||||||||||||||||  || ||||||| ||||||||||||||||||||||||||| ||||    
T  38651866 aaagattgagtcttggagcaaaagaaaggagaattggagctgattcatgccaaaaatattaagatcttatacaaaaatatcttgtgcaaagaattggaag 38651965  T
Q  399 atcttgtacaaaaatata 416  Q
    ||||||| | ||||||||    
T  38651966 atcttgtgccaaaatata 38651983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 356 - 432
Target Start/End: Complemental strand, 24125512 - 24125437
Alignment:
Q  356 atgaagatctcatacaaaaatatcttgtgcaaagaatttgaagatcttgtacaaaaatataacaagtggcgcgcccc 432  Q
    ||||| |||||||||||||||||| ||||||||||||||||||||||||||||| ||||||| ||||||||||||||    
T  24125512 atgaatatctcatacaaaaatatcatgtgcaaagaatttgaagatcttgtacaataatataa-aagtggcgcgcccc 24125437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 356 - 430
Target Start/End: Complemental strand, 45233987 - 45233914
Alignment:
Q  356 atgaagatctcatacaaaaatatcttgtgcaaagaatttgaagatcttgtacaaaaatataacaagtggcgcgcc 430  Q
    ||||| |||||||||||||||||| ||||||||||||||||||||||||||||| ||||||| ||||||| ||||    
T  45233987 atgaatatctcatacaaaaatatcatgtgcaaagaatttgaagatcttgtacaataatataa-aagtggcacgcc 45233914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 306 - 390
Target Start/End: Complemental strand, 11889393 - 11889309
Alignment:
Q  306 gagtcttggagcaaaagaaataagaattagagctgattcatgccaaaatcatgaagatctcatacaaaaatatcttgtgcaaaga 390  Q
    ||||||||||||||||||||  |||||| ||||| |||||||||||||  |||||||||||||| |||||||| || ||||||||    
T  11889393 gagtcttggagcaaaagaaaggagaattggagcttattcatgccaaaaatatgaagatctcatataaaaatatattatgcaaaga 11889309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 356 - 416
Target Start/End: Complemental strand, 11902916 - 11902856
Alignment:
Q  356 atgaagatctcatacaaaaatatcttgtgcaaagaatttgaagatcttgtacaaaaatata 416  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||| || |||||    
T  11902916 atgaatatctcatacaaaaatatcttgtgcaaagaatttgaagatcttgtaccaatatata 11902856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 356 - 432
Target Start/End: Original strand, 15409830 - 15409905
Alignment:
Q  356 atgaagatctcatacaaaaatatcttgtgcaaagaatttgaagatcttgtacaaaaatataacaagtggcgcgcccc 432  Q
    ||||| |||||||||||||||||| |||||||||| |||||||||||||||||| ||||||| ||||||| ||||||    
T  15409830 atgaatatctcatacaaaaatatcatgtgcaaagagtttgaagatcttgtacaataatataa-aagtggcacgcccc 15409905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 356 - 432
Target Start/End: Original strand, 31593671 - 31593746
Alignment:
Q  356 atgaagatctcatacaaaaatatcttgtgcaaagaatttgaagatcttgtacaaaaatataacaagtggcgcgcccc 432  Q
    ||||| |||||||||||||||||  |||||||||||||||||||||||||||||| |||| ||||| ||||||||||    
T  31593671 atgaatatctcatacaaaaatattctgtgcaaagaatttgaagatcttgtacaaatatat-acaagaggcgcgcccc 31593746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 356 - 414
Target Start/End: Complemental strand, 45244556 - 45244498
Alignment:
Q  356 atgaagatctcatacaaaaatatcttgtgcaaagaatttgaagatcttgtacaaaaata 414  Q
    ||||| |||||||||||||||||| ||||||||||||||||||||||||||||| ||||    
T  45244556 atgaatatctcatacaaaaatatcatgtgcaaagaatttgaagatcttgtacaataata 45244498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 356 - 417
Target Start/End: Original strand, 21275031 - 21275092
Alignment:
Q  356 atgaagatctcatacaaaaatatcttgtgcaaagaatttgaagatcttgtacaaaaatataa 417  Q
    ||||| |||||||||||||||||| ||||||||||||||||||||||||| ||| |||||||    
T  21275031 atgaatatctcatacaaaaatatcatgtgcaaagaatttgaagatcttgttcaataatataa 21275092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 299 - 387
Target Start/End: Original strand, 13622011 - 13622099
Alignment:
Q  299 aaagatggagtcttggagcaaaagaaataagaattagagctgattcatgccaaaatcatgaagatctcatacaaaaatatcttgtgcaa 387  Q
    |||||| ||||||||||||||||||||  |||||| |||||||||| |||||||||    ||||||| |||||||||||||| ||||||    
T  13622011 aaagattgagtcttggagcaaaagaaaggagaattggagctgattcgtgccaaaatgtaaaagatcttatacaaaaatatctggtgcaa 13622099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 369 - 432
Target Start/End: Original strand, 13622109 - 13622171
Alignment:
Q  369 acaaaaatatcttgtgcaaagaatttgaagatcttgtacaaaaatataacaagtggcgcgcccc 432  Q
    ||||||||||| |||||||||||||||||||||||||||||| |||| ||||| ||||||||||    
T  13622109 acaaaaatatcatgtgcaaagaatttgaagatcttgtacaaatatat-acaagaggcgcgcccc 13622171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 356 - 414
Target Start/End: Complemental strand, 3772497 - 3772439
Alignment:
Q  356 atgaagatctcatacaaaaatatcttgtgcaaagaatttgaagatcttgtacaaaaata 414  Q
    ||||| |||||||||||||||||  ||||||||||||||||||||||||||||| ||||    
T  3772497 atgaatatctcatacaaaaatataatgtgcaaagaatttgaagatcttgtacaataata 3772439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 299 - 387
Target Start/End: Complemental strand, 11903023 - 11902934
Alignment:
Q  299 aaagatggagtcttggagcaaaagaaataagaattagagctgattcatgccaaaatcat-gaagatctcatacaaaaatatcttgtgcaa 387  Q
    |||||| ||||||||||||||||||||  |||||| |||||||||| ||||||||  ||  ||||||| |||||||||||||| ||||||    
T  11903023 aaagattgagtcttggagcaaaagaaaggagaattggagctgattcgtgccaaaaatataaaagatcttatacaaaaatatctggtgcaa 11902934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 356 - 401
Target Start/End: Complemental strand, 11889294 - 11889249
Alignment:
Q  356 atgaagatctcatacaaaaatatcttgtgcaaagaatttgaagatc 401  Q
    ||||||||||||||| |||||||||| |||||||||||||||||||    
T  11889294 atgaagatctcataccaaaatatcttctgcaaagaatttgaagatc 11889249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 299 - 387
Target Start/End: Original strand, 15409723 - 15409812
Alignment:
Q  299 aaagatggagtcttggagcaaaagaaataagaattagagctgattcatgccaaaatcat-gaagatctcatacaaaaatatcttgtgcaa 387  Q
    |||||| ||||||||||||||||||||  |||||| |||||||||| ||||||||  ||  ||||||| | |||||||||||| ||||||    
T  15409723 aaagattgagtcttggagcaaaagaaaggagaatttgagctgattcgtgccaaaaatataaaagatcttacacaaaaatatctggtgcaa 15409812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 299 - 387
Target Start/End: Complemental strand, 45234094 - 45234005
Alignment:
Q  299 aaagatggagtcttggagcaaaagaaataagaattagagctgattcatgccaaaatcat-gaagatctcatacaaaaatatcttgtgcaa 387  Q
    |||||| |||||||||||||||| |||  |||||| |||||||||| ||||||||  ||  ||||||| |||||||||||||| ||||||    
T  45234094 aaagattgagtcttggagcaaaaaaaaggagaattggagctgattcgtgccaaaaatataaaagatcttatacaaaaatatctggtgcaa 45234005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 299 - 378
Target Start/End: Complemental strand, 24125618 - 24125538
Alignment:
Q  299 aaagatggagtcttggagcaaaagaaataagaattagagctgattcatgccaaaatcat-gaagatctcatacaaaaatat 378  Q
    |||||| ||||||||||||||||||||  |||||| |||||||||| ||||||||  ||  ||||||| ||||||||||||    
T  24125618 aaagattgagtcttggagcaaaagaaaggagaattggagctgattcgtgccaaaaatataaaagatcttatacaaaaatat 24125538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 298 - 353
Target Start/End: Complemental strand, 5514017 - 5513962
Alignment:
Q  298 gaaagatggagtcttggagcaaaagaaataagaattagagctgattcatgccaaaa 353  Q
    ||||||| ||||||||||||||||||||| ||| |||||||||||||  |||||||    
T  5514017 gaaagattgagtcttggagcaaaagaaatgagatttagagctgattcgggccaaaa 5513962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 298 - 375
Target Start/End: Original strand, 10730825 - 10730902
Alignment:
Q  298 gaaagatggagtcttggagcaaaagaaataagaattagagctgattcatgccaaaatcatgaagatctcatacaaaaa 375  Q
    |||||||||||| |||| ||||||||||  |||||| ||||| |||||| ||||||  || |||||||||| ||||||    
T  10730825 gaaagatggagtgttggtgcaaaagaaaggagaattggagcttattcatcccaaaaatataaagatctcatgcaaaaa 10730902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 298 - 375
Target Start/End: Original strand, 10944594 - 10944671
Alignment:
Q  298 gaaagatggagtcttggagcaaaagaaataagaattagagctgattcatgccaaaatcatgaagatctcatacaaaaa 375  Q
    |||||||||||| |||| ||||||||||  |||||| ||||| |||||| ||||||  || |||||||||| ||||||    
T  10944594 gaaagatggagtgttggtgcaaaagaaaggagaattggagcttattcatcccaaaaatataaagatctcatgcaaaaa 10944671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0334 (Bit Score: 69; Significance: 8e-31; HSPs: 1)
Name: scaffold0334
Description:

Target: scaffold0334; HSP #1
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 307 - 407
Target Start/End: Original strand, 6936 - 7036
Alignment:
Q  307 agtcttggagcaaaagaaataagaattagagctgattcatgccaaaatcatgaagatctcatacaaaaatatcttgtgcaaagaatttgaagatcttgta 406  Q
    |||||||||||||||||||   ||||| |||||||||||||||||||  |||||||||||||| ||||||||||||||||||||||| ||||||||||||    
T  6936 agtcttggagcaaaagaaaggggaattggagctgattcatgccaaaaatatgaagatctcatataaaaatatcttgtgcaaagaattagaagatcttgta 7035  T
Q  407 c 407  Q
    |    
T  7036 c 7036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0092 (Bit Score: 69; Significance: 8e-31; HSPs: 2)
Name: scaffold0092
Description:

Target: scaffold0092; HSP #1
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 340 - 428
Target Start/End: Complemental strand, 19839 - 19751
Alignment:
Q  340 gattcatgccaaaatcatgaagatctcatacaaaaatatcttgtgcaaagaatttgaagatcttgtacaaaaatataacaagtggcgcg 428  Q
    ||||| ||||||||  ||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  19839 gattcgtgccaaaaatatgaagatctcatacaaaaatttcttgtgcaaagaatttgaagatcttgtgcaaaaatataacaagtggcgcg 19751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0092; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 298 - 378
Target Start/End: Complemental strand, 19930 - 19850
Alignment:
Q  298 gaaagatggagtcttggagcaaaagaaataagaattagagctgattcatgccaaaatcatgaagatctcatacaaaaatat 378  Q
    ||||||||||||||||||| ||||||||  |||||| ||||| |||||||||||||  || |||||||||| |||||||||    
T  19930 gaaagatggagtcttggagaaaaagaaaggagaattggagcttattcatgccaaaaatataaagatctcatgcaaaaatat 19850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 66; Significance: 5e-29; HSPs: 11)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 356 - 441
Target Start/End: Complemental strand, 10058 - 9973
Alignment:
Q  356 atgaagatctcatacaaaaatatcttgtgcaaagaatttgaagatcttgtacaaaaatataacaagtggcgcgccccttttgccct 441  Q
    ||||||||||||| ||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||| ||||||| ||||    
T  10058 atgaagatctcatgcaaaaatatattgtgcaaagaatttgaagatcttgtgcaaaaatataacaagtggcgcgacccttttaccct 9973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 340 - 432
Target Start/End: Complemental strand, 14351944 - 14351853
Alignment:
Q  340 gattcatgccaaaatcatgaagatctcatacaaaaatatcttgtgcaaagaatttgaagatcttgtacaaaaatataacaagtggcgcgcccc 432  Q
    |||||| |||||||  ||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||    
T  14351944 gattcaagccaaaaatatgaagatctcataccaaaatatcttgtgcaaagaatttgaagatcttgtacaataatataa-aagtggcgcgcccc 14351853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 340 - 432
Target Start/End: Original strand, 24967045 - 24967136
Alignment:
Q  340 gattcatgccaaaatcatgaagatctcatacaaaaatatcttgtgcaaagaatttgaagatcttgtacaaaaatataacaagtggcgcgcccc 432  Q
    ||||||||| ||||  |||||||| |||||| |||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||    
T  24967045 gattcatgcaaaaaatatgaagatatcatactaaaatatcttgtgcaaagaatttgaagatcttgtacaataatataa-aagtggcgcgcccc 24967136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 356 - 431
Target Start/End: Original strand, 18161799 - 18161873
Alignment:
Q  356 atgaagatctcatacaaaaatatcttgtgcaaagaatttgaagatcttgtacaaaaatataacaagtggcgcgccc 431  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||    
T  18161799 atgaatatctcatacaaaaatatcttgtgcaaagaatttgaagatcttgtacaataatataa-aagtggcgcgccc 18161873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 299 - 416
Target Start/End: Original strand, 21319158 - 21319275
Alignment:
Q  299 aaagatggagtcttggagcaaaagaaataagaattagagctgattcatgccaaaatcatgaagatctcatacaaaaatatcttgtgcaaagaatttgaag 398  Q
    |||||| || ||||||||||||| |||  ||||||  ||||||||| ||||||||  |||||||||||||||||||||||||||||||||||| || |||    
T  21319158 aaagattgaatcttggagcaaaaaaaaggagaattgaagctgattcgtgccaaaaatatgaagatctcatacaaaaatatcttgtgcaaagaaattaaag 21319257  T
Q  399 atcttgtacaaaaatata 416  Q
    || |||||| | ||||||    
T  21319258 atgttgtactagaatata 21319275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 298 - 401
Target Start/End: Original strand, 24341774 - 24341877
Alignment:
Q  298 gaaagatggagtcttggagcaaaagaaataagaattagagctgattcatgccaaaatcatgaagatctcatacaaaaatatcttgtgcaaagaatttgaa 397  Q
    ||||||| ||||||| ||||||||||||| ||| || |||||||||  ||||||||  |||||||||| |||||||||||||||||||||| | ||||||    
T  24341774 gaaagattgagtcttagagcaaaagaaatgagatttggagctgatttgtgccaaaaatatgaagatcttatacaaaaatatcttgtgcaaaaagtttgaa 24341873  T
Q  398 gatc 401  Q
    ||||    
T  24341874 gatc 24341877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 298 - 390
Target Start/End: Original strand, 24966954 - 24967046
Alignment:
Q  298 gaaagatggagtcttggagcaaaagaaataagaattagagctgattcatgccaaaatcatgaagatctcatacaaaaatatcttgtgcaaaga 390  Q
    ||||||||||||||||||||||||||||  |||||| ||||| |||||| | ||||  || |||||||||| ||||||||| || ||||||||    
T  24966954 gaaagatggagtcttggagcaaaagaaaggagaattggagcttattcatacaaaaaatataaagatctcatgcaaaaatatattttgcaaaga 24967046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 307 - 388
Target Start/End: Complemental strand, 10141 - 10060
Alignment:
Q  307 agtcttggagcaaaagaaataagaattagagctgattcatgccaaaatcatgaagatctcatacaaaaatatcttgtgcaaa 388  Q
    |||||||||||||||||||  | |||| ||| | |||||||||||||  ||||||||||||| ||||||||| |||||||||    
T  10141 agtcttggagcaaaagaaaggaaaattggagtttattcatgccaaaaatatgaagatctcatgcaaaaatatattgtgcaaa 10060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 299 - 390
Target Start/End: Complemental strand, 14352033 - 14351943
Alignment:
Q  299 aaagatggagtcttggagcaaaagaaataagaattagagctgattcatgccaaaatcatgaagatctcatacaaaaatatcttgtgcaaaga 390  Q
    |||||| |||||||||||||||||||   |||||| ||||| |||||||||||||| || ||||||| || |||||| || |||||||||||    
T  14352033 aaagattgagtcttggagcaaaagaagggagaattggagcttattcatgccaaaattataaagatcttatgcaaaaa-atattgtgcaaaga 14351943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 299 - 387
Target Start/End: Original strand, 18161692 - 18161781
Alignment:
Q  299 aaagatggagtcttggagcaaaagaaataagaattagagctgattcatgccaa-aatcatgaagatctcatacaaaaatatcttgtgcaa 387  Q
    |||||| ||||||||||||||||||||  |||||| |||||||||| |||||| |||    ||||||| |||||||||||||| ||||||    
T  18161692 aaagattgagtcttggagcaaaagaaaggagaatttgagctgattcgtgccaacaatataaaagatcttatacaaaaatatctggtgcaa 18161781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 298 - 379
Target Start/End: Complemental strand, 24221986 - 24221905
Alignment:
Q  298 gaaagatggagtcttggagcaaaagaaataagaattagagctgattcatgccaaaatcatgaagatctcatacaaaaatatc 379  Q
    ||||||| ||||||||||||||||||||  ||| |||||||| ||| | |||||||  ||||||||||  | ||||||||||    
T  24221986 gaaagatcgagtcttggagcaaaagaaaggagatttagagctaattgaggccaaaaatatgaagatcttgtgcaaaaatatc 24221905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0168 (Bit Score: 64; Significance: 8e-28; HSPs: 2)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 340 - 443
Target Start/End: Complemental strand, 9182 - 9079
Alignment:
Q  340 gattcatgccaaaatcatgaagatctcatacaaaaatatcttgtgcaaagaatttgaagatcttgtacaaaaatataacaagtggcgcgccccttttgcc 439  Q
    ||||||||||||||  ||||||||||||| ||||||| | |||||||||||||||||| |||||||  ||||||||||||||||||||| ||||||| ||    
T  9182 gattcatgccaaaaatatgaagatctcatgcaaaaatctattgtgcaaagaatttgaacatcttgtcaaaaaatataacaagtggcgcgacccttttacc 9083  T
Q  440 cttt 443  Q
    ||||    
T  9082 cttt 9079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0168; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 307 - 378
Target Start/End: Complemental strand, 9264 - 9193
Alignment:
Q  307 agtcttggagcaaaagaaataagaattagagctgattcatgccaaaatcatgaagatctcatacaaaaatat 378  Q
    |||||||||||||||||||  |||||| ||||| |||||||||| ||  ||||||||||||| |||||||||    
T  9264 agtcttggagcaaaagaaaggagaattggagcttattcatgccataaatatgaagatctcatgcaaaaatat 9193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 61; Significance: 5e-26; HSPs: 27)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 298 - 390
Target Start/End: Complemental strand, 23140379 - 23140287
Alignment:
Q  298 gaaagatggagtcttggagcaaaagaaataagaattagagctgattcatgccaaaatcatgaagatctcatacaaaaatatcttgtgcaaaga 390  Q
    ||||||||||||||||||||||||||||| |||||| ||||| |||||||||||||  || |||||||||| ||||||||| |||||||||||    
T  23140379 gaaagatggagtcttggagcaaaagaaatgagaattggagcttattcatgccaaaaatataaagatctcatgcaaaaatatattgtgcaaaga 23140287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 298 - 390
Target Start/End: Complemental strand, 23552169 - 23552077
Alignment:
Q  298 gaaagatggagtcttggagcaaaagaaataagaattagagctgattcatgccaaaatcatgaagatctcatacaaaaatatcttgtgcaaaga 390  Q
    ||||||||||||||||||||||||||||| |||||| ||||| |||||||||||||  || |||||||||| ||||||||| |||||||||||    
T  23552169 gaaagatggagtcttggagcaaaagaaatgagaattggagcttattcatgccaaaaatataaagatctcatgcaaaaatatattgtgcaaaga 23552077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 356 - 432
Target Start/End: Original strand, 24507110 - 24507185
Alignment:
Q  356 atgaagatctcatacaaaaatatcttgtgcaaagaatttgaagatcttgtacaaaaatataacaagtggcgcgcccc 432  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||    
T  24507110 atgaatatctcatacaaaaatatcttgtgcaaagaatttgaagatcttgtacaataatataa-aagtggcgcgcccc 24507185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 341 - 417
Target Start/End: Original strand, 44997996 - 44998072
Alignment:
Q  341 attcatgccaaaatcatgaagatctcatacaaaaatatcttgtgcaaagaatttgaagatcttgtacaaaaatataa 417  Q
    |||||||||||||  ||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||    
T  44997996 attcatgccaaaaatatgaagatctcataccaaaatatcttgtgcaaagaatttgaagatcttgtacaataatataa 44998072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 356 - 430
Target Start/End: Original strand, 25481177 - 25481250
Alignment:
Q  356 atgaagatctcatacaaaaatatcttgtgcaaagaatttgaagatcttgtacaaaaatataacaagtggcgcgcc 430  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||    
T  25481177 atgaatatctcatacaaaaatatcttgtgcaaagaatttgaagatcttgtacaaaaatataa-aagtggtgcgcc 25481250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 356 - 430
Target Start/End: Original strand, 25488783 - 25488856
Alignment:
Q  356 atgaagatctcatacaaaaatatcttgtgcaaagaatttgaagatcttgtacaaaaatataacaagtggcgcgcc 430  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||    
T  25488783 atgaatatctcatacaaaaatatcttgtgcaaagaatttgaagatcttgtacaaaaatataa-aagtggtgcgcc 25488856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 309 - 401
Target Start/End: Original strand, 15583502 - 15583594
Alignment:
Q  309 tcttggagcaaaagaaataagaattagagctgattcatgccaaaatcatgaagatctcatacaaaaatatcttgtgcaaagaatttgaagatc 401  Q
    ||||||||||||| |||  |||||| |||||||||| ||||||||  |||||||||| |||||||||||||||| ||||||||||||||||||    
T  15583502 tcttggagcaaaataaaggagaattggagctgattcgtgccaaaaatatgaagatcttatacaaaaatatcttgcgcaaagaatttgaagatc 15583594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 340 - 432
Target Start/End: Complemental strand, 23140288 - 23140197
Alignment:
Q  340 gattcatgccaaaatcatgaagatctcatacaaaaatatcttgtgcaaagaatttgaagatcttgtacaaaaatataacaagtggcgcgcccc 432  Q
    ||||||||||||||  ||||||||||||||  |||||||||||||||||||||| ||||||||||||||| |||| || ||||||||||||||    
T  23140288 gattcatgccaaaaatatgaagatctcataacaaaatatcttgtgcaaagaattcgaagatcttgtacaataata-aaaaagtggcgcgcccc 23140197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 340 - 432
Target Start/End: Complemental strand, 23552078 - 23551987
Alignment:
Q  340 gattcatgccaaaatcatgaagatctcatacaaaaatatcttgtgcaaagaatttgaagatcttgtacaaaaatataacaagtggcgcgcccc 432  Q
    ||||||||||||||  ||||||||||||||  |||||||||||||||||||||| ||||||||||||||| |||| || ||||||||||||||    
T  23552078 gattcatgccaaaaatatgaagatctcataacaaaatatcttgtgcaaagaattcgaagatcttgtacaataata-aaaaagtggcgcgcccc 23551987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 298 - 387
Target Start/End: Complemental strand, 29568890 - 29568801
Alignment:
Q  298 gaaagatggagtcttggagcaaaagaaataagaattagagctgattcatgccaaaatcatgaagatctcatacaaaaatatcttgtgcaa 387  Q
    ||||||||||||||| ||||||| ||||  |||||| ||||| |||||||||||||  |||||||||||||| |||||||||||||||||    
T  29568890 gaaagatggagtcttcgagcaaaggaaaggagaattggagctaattcatgccaaaaatatgaagatctcatataaaaatatcttgtgcaa 29568801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 341 - 401
Target Start/End: Complemental strand, 29568798 - 29568738
Alignment:
Q  341 attcatgccaaaatcatgaagatctcatacaaaaatatcttgtgcaaagaatttgaagatc 401  Q
    |||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||    
T  29568798 attcatgccaaaaatatgaagatctcatacaaaaatatcttgtgcaaagaatttgaagatc 29568738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 298 - 381
Target Start/End: Complemental strand, 25859045 - 25858962
Alignment:
Q  298 gaaagatggagtcttggagcaaaagaaataagaattagagctgattcatgccaaaatcatgaagatctcatacaaaaatatctt 381  Q
    ||||||||||||||||||||||||||||  ||||||  |||||||||||| |||||  ||||||||||||||||||| ||||||    
T  25859045 gaaagatggagtcttggagcaaaagaaaggagaattgaagctgattcatgtcaaaaatatgaagatctcatacaaaactatctt 25858962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 362 - 416
Target Start/End: Complemental strand, 32441688 - 32441634
Alignment:
Q  362 atctcatacaaaaatatcttgtgcaaagaatttgaagatcttgtacaaaaatata 416  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  32441688 atctcatacaaaaatatcttgtgcaaagaatttgaagatcttgtacaaatatata 32441634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 362 - 432
Target Start/End: Complemental strand, 16134476 - 16134407
Alignment:
Q  362 atctcatacaaaaatatcttgtgcaaagaatttgaagatcttgtacaaaaatataacaagtggcgcgcccc 432  Q
    |||||||||||||||||| |||||||||||||||||||| |||||||| ||||||| ||||||| ||||||    
T  16134476 atctcatacaaaaatatcatgtgcaaagaatttgaagatattgtacaataatataa-aagtggcacgcccc 16134407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 298 - 388
Target Start/End: Original strand, 44997904 - 44997994
Alignment:
Q  298 gaaagatggagtcttggagcaaaagaaataagaattagagctgattcatgccaaaatcatgaagatctcatacaaaaatatcttgtgcaaa 388  Q
    ||||||||||||||| ||||||||||||  ||||||  |||| |||||||||||||  || |||||||||| ||||||||| |||||||||    
T  44997904 gaaagatggagtctttgagcaaaagaaaggagaattgaagcttattcatgccaaaaatataaagatctcatgcaaaaatatattgtgcaaa 44997994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 356 - 416
Target Start/End: Original strand, 20281829 - 20281889
Alignment:
Q  356 atgaagatctcatacaaaaatatcttgtgcaaagaatttgaagatcttgtacaaaaatata 416  Q
    ||||| |||||||||||||||||| ||||||||||||||||||||||| |||||| |||||    
T  20281829 atgaatatctcatacaaaaatatcctgtgcaaagaatttgaagatcttttacaaatatata 20281889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 299 - 401
Target Start/End: Complemental strand, 25337523 - 25337421
Alignment:
Q  299 aaagatggagtcttggagcaaaagaaataagaattagagctgattcatgccaaaatcatgaagatctcatacaaaaatatcttgtgcaaagaatttgaag 398  Q
    |||||| |||||||||||||||||||   ||| || |||||||||  ||||||||  |||||||||| |||||||||||| ||||||| | | |||||||    
T  25337523 aaagattgagtcttggagcaaaagaatggagatttggagctgatttgtgccaaaaatatgaagatcttatacaaaaatatattgtgcataaagtttgaag 25337424  T
Q  399 atc 401  Q
    |||    
T  25337423 atc 25337421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 362 - 415
Target Start/End: Original strand, 19927200 - 19927253
Alignment:
Q  362 atctcatacaaaaatatcttgtgcaaagaatttgaagatcttgtacaaaaatat 415  Q
    |||||||||||||||||| || ||||||||||||||||||||||||||| ||||    
T  19927200 atctcatacaaaaatatcctgcgcaaagaatttgaagatcttgtacaaatatat 19927253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 397 - 443
Target Start/End: Complemental strand, 25858907 - 25858861
Alignment:
Q  397 agatcttgtacaaaaatataacaagtggcgcgccccttttgcccttt 443  Q
    ||||||||||||||||||||||||||||||||||||| ||| |||||    
T  25858907 agatcttgtacaaaaatataacaagtggcgcgcccctattgtccttt 25858861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 299 - 387
Target Start/End: Original strand, 19927087 - 19927176
Alignment:
Q  299 aaagatggagtcttggagcaaaagaaataagaattagagctgattcatgccaaaatcat-gaagatctcatacaaaaatatcttgtgcaa 387  Q
    |||||| |||||||||||||||||||||  ||||| ||| |||||| ||||||||  ||  ||||||| |||||||||||||| ||||||    
T  19927087 aaagattgagtcttggagcaaaagaaatttgaatttgagttgattcgtgccaaaaatataaaagatcttatacaaaaatatctggtgcaa 19927176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 306 - 387
Target Start/End: Original strand, 20281730 - 20281811
Alignment:
Q  306 gagtcttggagcaaaagaaataagaattagagctgattcatgccaaaatcatgaagatctcatacaaaaatatcttgtgcaa 387  Q
    ||||||||||||||||||||  |||||| |||||||||| |||||||||    || |||| |||||||||||||| ||||||    
T  20281730 gagtcttggagcaaaagaaaggagaattggagctgattcgtgccaaaatataaaacatcttatacaaaaatatctggtgcaa 20281811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 299 - 387
Target Start/End: Complemental strand, 32441801 - 32441712
Alignment:
Q  299 aaagatggagtcttggagcaaaagaaataagaattagagctgattcatgccaaaatcat-gaagatctcatacaaaaatatcttgtgcaa 387  Q
    |||||| ||||||||||||||||||||  |||||| |||||||||| ||||||||  ||  ||||||| ||| |||||||||| ||||||    
T  32441801 aaagattgagtcttggagcaaaagaaaggagaattggagctgattcgtgccaaaaatataaaagatcttatagaaaaatatctggtgcaa 32441712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 299 - 380
Target Start/End: Original strand, 24507003 - 24507085
Alignment:
Q  299 aaagatggagtcttggagcaaaagaaataagaattagagctgattcatgccaaaatcat-gaagatctcatacaaaaatatct 380  Q
    |||||| ||||||| ||||||||||||  |||||| |||||||||| ||||||||  ||  ||||||| ||||||||||||||    
T  24507003 aaagattgagtctttgagcaaaagaaaagagaattggagctgattcgtgccaaaaatataaaagatcttatacaaaaatatct 24507085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 299 - 387
Target Start/End: Original strand, 11390846 - 11390935
Alignment:
Q  299 aaagatggagtcttggagcaaaagaaataagaattagagctgattcatgccaaaatcat-gaagatctcatacaaaaatatcttgtgcaa 387  Q
    |||||| ||||||||||||||||||||  |||||| |||||||||| | ||||||  ||  ||||||| |||||||||||| | ||||||    
T  11390846 aaagattgagtcttggagcaaaagaaaagagaattggagctgattcgtaccaaaaatataaaagatcttatacaaaaatatttggtgcaa 11390935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 299 - 387
Target Start/End: Original strand, 11407507 - 11407596
Alignment:
Q  299 aaagatggagtcttggagcaaaagaaataagaattagagctgattcatgccaaaatcat-gaagatctcatacaaaaatatcttgtgcaa 387  Q
    |||||| ||||||||||||||||||||  |||||| |||||||||| | ||||||  ||  ||||||| |||||||||||| | ||||||    
T  11407507 aaagattgagtcttggagcaaaagaaaagagaattggagctgattcgtaccaaaaatataaaagatcttatacaaaaatatttggtgcaa 11407596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 299 - 387
Target Start/End: Complemental strand, 16134589 - 16134500
Alignment:
Q  299 aaagatggagtcttggagcaaaagaaataagaattagagctgattcatgccaaaatcat-gaagatctcatacaaaaatatcttgtgcaa 387  Q
    |||||| |||||||||||||||||||  || |||| |||||||||| ||||||||  ||  ||||||| |||||||||||| | ||||||    
T  16134589 aaagattgagtcttggagcaaaagaaggaaaaattggagctgattcgtgccaaaaatataaaagatcttatacaaaaatatatggtgcaa 16134500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 298 - 378
Target Start/End: Complemental strand, 24371875 - 24371795
Alignment:
Q  298 gaaagatggagtcttggagcaaaagaaataagaattagagctgattcatgccaaaatcatgaagatctcatacaaaaatat 378  Q
    ||||||| ||||||||||| ||||||||  ||| || ||||||||| | |||||||  ||||||||||  | |||||||||    
T  24371875 gaaagattgagtcttggagaaaaagaaaggagatttggagctgattgaggccaaaactatgaagatcttgtgcaaaaatat 24371795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0471 (Bit Score: 57; Significance: 1e-23; HSPs: 2)
Name: scaffold0471
Description:

Target: scaffold0471; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 356 - 432
Target Start/End: Complemental strand, 10100 - 10025
Alignment:
Q  356 atgaagatctcatacaaaaatatcttgtgcaaagaatttgaagatcttgtacaaaaatataacaagtggcgcgcccc 432  Q
    ||||| |||||||||||||||||| ||||||||||||||||||||||||||||| ||||||| ||||||||||||||    
T  10100 atgaatatctcatacaaaaatatcatgtgcaaagaatttgaagatcttgtacaataatataa-aagtggcgcgcccc 10025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0471; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 299 - 378
Target Start/End: Complemental strand, 10206 - 10126
Alignment:
Q  299 aaagatggagtcttggagcaaaagaaataagaattagagctgattcatgccaaaatcat-gaagatctcatacaaaaatat 378  Q
    |||||| ||||||||||||||||||||  |||||| |||||||||| ||||||||  ||  ||||||| ||||||||||||    
T  10206 aaagattgagtcttggagcaaaagaaaggagaattggagctgattcgtgccaaaaatataaaagatcttatacaaaaatat 10126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0371 (Bit Score: 53; Significance: 3e-21; HSPs: 2)
Name: scaffold0371
Description:

Target: scaffold0371; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 356 - 432
Target Start/End: Complemental strand, 9381 - 9306
Alignment:
Q  356 atgaagatctcatacaaaaatatcttgtgcaaagaatttgaagatcttgtacaaaaatataacaagtggcgcgcccc 432  Q
    ||||| |||||||||||||||||| |||| |||||||||||||||||||||||| ||||||| ||||||||||||||    
T  9381 atgaatatctcatacaaaaatatcatgtgaaaagaatttgaagatcttgtacaataatataa-aagtggcgcgcccc 9306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0371; HSP #2
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 299 - 387
Target Start/End: Complemental strand, 9488 - 9399
Alignment:
Q  299 aaagatggagtcttggagcaaaagaaataagaattagagctgattcatgccaaaatcatgaa-gatctcatacaaaaatatcttgtgcaa 387  Q
    |||||| |||||||| || ||||||||  |||||| ||| |||||| ||||||||  ||||| ||||| |||||||||||||| ||||||    
T  9488 aaagattgagtcttgcagaaaaagaaaggagaattggagttgattcgtgccaaaaatatgaaagatcttatacaaaaatatctggtgcaa 9399  T

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Target: scaffold0251 (Bit Score: 53; Significance: 3e-21; HSPs: 2)
Name: scaffold0251
Description:

Target: scaffold0251; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 356 - 432
Target Start/End: Complemental strand, 19234 - 19159
Alignment:
Q  356 atgaagatctcatacaaaaatatcttgtgcaaagaatttgaagatcttgtacaaaaatataacaagtggcgcgcccc 432  Q
    ||||| |||||||||||||||||| |||||||||||||||||||||||| |||| ||||||| ||||||||||||||    
T  19234 atgaatatctcatacaaaaatatcatgtgcaaagaatttgaagatcttgaacaataatataa-aagtggcgcgcccc 19159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0251; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 299 - 387
Target Start/End: Complemental strand, 19341 - 19252
Alignment:
Q  299 aaagatggagtcttggagcaaaagaaataagaattagagctgattcatgccaaaatcat-gaagatctcatacaaaaatatcttgtgcaa 387  Q
    |||||| ||||||||||||||| ||||  |||||| |||||||||| ||||||||  ||  ||||||| |||||||||||||| ||||||    
T  19341 aaagattgagtcttggagcaaatgaaaagagaattggagctgattcgtgccaaaaatataaaagatcttatacaaaaatatctggtgcaa 19252  T

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Target: scaffold0713 (Bit Score: 51; Significance: 5e-20; HSPs: 2)
Name: scaffold0713
Description:

Target: scaffold0713; HSP #1
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 298 - 388
Target Start/End: Complemental strand, 7040 - 6950
Alignment:
Q  298 gaaagatggagtcttggagcaaaagaaataagaattagagctgattcatgccaaaatcatgaagatctcatacaaaaatatcttgtgcaaa 388  Q
    ||||||||||||||| ||||||||||||  |||||| ||||| |||| ||| ||||  |||||||||| ||||||||||||||||||||||    
T  7040 gaaagatggagtcttagagcaaaagaaaggagaattggagctaattcgtgcaaaaaatatgaagatctgatacaaaaatatcttgtgcaaa 6950  T

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Target: scaffold0713; HSP #2
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 399 - 438
Target Start/End: Complemental strand, 6961 - 6922
Alignment:
Q  399 atcttgtacaaaaatataacaagtggcgcgccccttttgc 438  Q
    ||||||| ||||||||||||||||||||||||||||||||    
T  6961 atcttgtgcaaaaatataacaagtggcgcgccccttttgc 6922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0064 (Bit Score: 51; Significance: 5e-20; HSPs: 2)
Name: scaffold0064
Description:

Target: scaffold0064; HSP #1
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 356 - 430
Target Start/End: Original strand, 48589 - 48662
Alignment:
Q  356 atgaagatctcatacaaaaatatcttgtgcaaagaatttgaagatcttgtacaaaaatataacaagtggcgcgcc 430  Q
    ||||| ||| |||||||||||||| ||||||||||||||||||||||||||||| ||||||| ||||||||||||    
T  48589 atgaatatcccatacaaaaatatcatgtgcaaagaatttgaagatcttgtacaataatataa-aagtggcgcgcc 48662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0064; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 299 - 377
Target Start/End: Original strand, 48482 - 48561
Alignment:
Q  299 aaagatggagtcttggagcaaaagaaataagaattagagctgattcatgccaaaatcatg-aagatctcatacaaaaata 377  Q
    |||||| ||||||||||||||||||||  |||||| |||||||||| ||||||||  ||| ||||||| |||||||||||    
T  48482 aaagattgagtcttggagcaaaagaaaggagaattggagctgattcgtgccaaaaatatgaaagatcttatacaaaaata 48561  T

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Target: scaffold0058 (Bit Score: 50; Significance: 2e-19; HSPs: 2)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 367 - 432
Target Start/End: Original strand, 61654 - 61718
Alignment:
Q  367 atacaaaaatatcttgtgcaaagaatttgaagatcttgtacaaaaatataacaagtggcgcgcccc 432  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||| ||||||    
T  61654 atacaaaaatatcctgtgcaaagaatttgaagatcttgtacaaaaatataa-aagtggcacgcccc 61718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 300 - 387
Target Start/End: Original strand, 61542 - 61630
Alignment:
Q  300 aagatggagtcttggagcaaaagaaataagaattagagctgattcatgccaaaatcat-gaagatctcatacaaaaatatcttgtgcaa 387  Q
    ||||| ||||||||||||||||||||  |||||| |||||||||| | ||||||  ||  ||||||| |||||||||||||| ||||||    
T  61542 aagattgagtcttggagcaaaagaaaggagaattggagctgattcgttccaaaaatataaaagatcttatacaaaaatatctggtgcaa 61630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057 (Bit Score: 49; Significance: 7e-19; HSPs: 2)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 356 - 416
Target Start/End: Original strand, 20958 - 21018
Alignment:
Q  356 atgaagatctcatacaaaaatatcttgtgcaaagaatttgaagatcttgtacaaaaatata 416  Q
    ||||| |||||||||||||||||| |||||||||||||||||||||||||||||| |||||    
T  20958 atgaatatctcatacaaaaatatcatgtgcaaagaatttgaagatcttgtacaaatatata 21018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057; HSP #2
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 299 - 387
Target Start/End: Original strand, 20851 - 20940
Alignment:
Q  299 aaagatggagtcttggagcaaaagaaataagaattagagctgattcatgccaaaatcat-gaagatctcatacaaaaatatcttgtgcaa 387  Q
    |||||| ||||||||||||||||||||  |||||  ||||| |||| ||||||||  ||  ||||||| |||||||||||||| ||||||    
T  20851 aaagattgagtcttggagcaaaagaaaggagaatcggagctaattcgtgccaaaaatataaaagatcttatacaaaaatatctggtgcaa 20940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 47; Significance: 1e-17; HSPs: 4)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 356 - 410
Target Start/End: Original strand, 23063 - 23117
Alignment:
Q  356 atgaagatctcatacaaaaatatcttgtgcaaagaatttgaagatcttgtacaaa 410  Q
    ||||| |||||||||||||||||| ||||||||||||||||||||||||||||||    
T  23063 atgaatatctcatacaaaaatatcatgtgcaaagaatttgaagatcttgtacaaa 23117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 356 - 417
Target Start/End: Original strand, 100168 - 100229
Alignment:
Q  356 atgaagatctcatacaaaaatatcttgtgcaaagaatttgaagatcttgtacaaaaatataa 417  Q
    ||||| || ||||||||||||||  ||||||||||||||||||||||||||||| |||||||    
T  100168 atgaatatgtcatacaaaaatataatgtgcaaagaatttgaagatcttgtacaataatataa 100229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031; HSP #3
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 299 - 387
Target Start/End: Original strand, 22956 - 23045
Alignment:
Q  299 aaagatggagtcttggagcaaaagaaataagaattagagctgattcatgccaaaatcat-gaagatctcatacaaaaatatcttgtgcaa 387  Q
    |||||| ||||||||||||||||||||  ||||||  ||||||||| ||||||||  ||  ||||||| |||||||||||||| ||||||    
T  22956 aaagattgagtcttggagcaaaagaaaggagaattgcagctgattcgtgccaaaaatataaaagatcttatacaaaaatatctggtgcaa 23045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031; HSP #4
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 299 - 387
Target Start/End: Original strand, 100061 - 100150
Alignment:
Q  299 aaagatggagtcttggagcaaaagaaataagaattagagctgattcatgccaaaatcat-gaagatctcatacaaaaatatcttgtgcaa 387  Q
    |||||| ||||||||||||||||||||  |||||| ||||| |||| ||||||||  ||  ||||||| | |||||||||||| ||||||    
T  100061 aaagattgagtcttggagcaaaagaaaggagaattggagcttattcgtgccaaaaatataaaagatcttacacaaaaatatctggtgcaa 100150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0916 (Bit Score: 45; Significance: 2e-16; HSPs: 2)
Name: scaffold0916
Description:

Target: scaffold0916; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 356 - 432
Target Start/End: Original strand, 3289 - 3364
Alignment:
Q  356 atgaagatctcatacaaaaatatcttgtgcaaagaatttgaagatcttgtacaaaaatataacaagtggcgcgcccc 432  Q
    ||||| || ||| ||||||||||| |||||||||||||||||||||||||||||| |||| ||||| ||||||||||    
T  3289 atgaatatatcacacaaaaatatcatgtgcaaagaatttgaagatcttgtacaaatatat-acaagaggcgcgcccc 3364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0916; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 299 - 387
Target Start/End: Original strand, 3182 - 3271
Alignment:
Q  299 aaagatggagtcttggagcaaaagaaataagaattagagctgattcatgccaaaatcat-gaagatctcatacaaaaatatcttgtgcaa 387  Q
    |||||| ||||||||||||||||||||  |||||| |||||||||| ||||||||  ||  ||||||  |||||||||||||| ||||||    
T  3182 aaagattgagtcttggagcaaaagaaaggagaattggagctgattcgtgccaaaaatataaaagatcatatacaaaaatatctggtgcaa 3271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0360 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 1)
Name: scaffold0360
Description:

Target: scaffold0360; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 299 - 380
Target Start/End: Complemental strand, 121 - 39
Alignment:
Q  299 aaagatggagtcttggagcaaaagaaataagaattagagctgattcatgccaaaatcatg-aagatctcatacaaaaatatct 380  Q
    |||||| ||||||||||||||||||||  |||||| |||||||||| ||||||||  ||| ||||||| ||||||||||||||    
T  121 aaagattgagtcttggagcaaaagaaaggagaattggagctgattcgtgccaaaaatatgaaagatcttatacaaaaatatct 39  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0096 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 2)
Name: scaffold0096
Description:

Target: scaffold0096; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 374 - 432
Target Start/End: Complemental strand, 38224 - 38167
Alignment:
Q  374 aatatcttgtgcaaagaatttgaagatcttgtacaaaaatataacaagtggcgcgcccc 432  Q
    ||||| |||||||||||||||||||||||||||||||||||||| ||||||| ||||||    
T  38224 aatattttgtgcaaagaatttgaagatcttgtacaaaaatataa-aagtggcacgcccc 38167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0096; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 356 - 410
Target Start/End: Complemental strand, 38264 - 38210
Alignment:
Q  356 atgaagatctcatacaaaaatatcttgtgcaaagaatttgaagatcttgtacaaa 410  Q
    ||||| ||||||||||||||||| |||||||||||||||||| || |||| ||||    
T  38264 atgaatatctcatacaaaaatattttgtgcaaagaatttgaatattttgtgcaaa 38210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0197 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 2)
Name: scaffold0197
Description:

Target: scaffold0197; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 356 - 416
Target Start/End: Complemental strand, 9169 - 9109
Alignment:
Q  356 atgaagatctcatacaaaaatatcttgtgcaaagaatttgaagatcttgtacaaaaatata 416  Q
    ||||| |||||||||||||||||  ||||||||||||||||||||||||| |||| |||||    
T  9169 atgaatatctcatacaaaaatataatgtgcaaagaatttgaagatcttgttcaaatatata 9109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0197; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 299 - 387
Target Start/End: Complemental strand, 9276 - 9187
Alignment:
Q  299 aaagatggagtcttggagcaaaagaaataagaattagagctgattcatgccaaaatcat-gaagatctcatacaaaaatatcttgtgcaa 387  Q
    |||||| ||||||||||||||| ||||  |||||| |||||||||| ||||||||  ||  ||||||| |||||||||||||| ||||||    
T  9276 aaagattgagtcttggagcaaatgaaaggagaattggagctgattcgtgccaaaaatataaaagatcttatacaaaaatatctggtgcaa 9187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0447 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 4)
Name: scaffold0447
Description:

Target: scaffold0447; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 356 - 415
Target Start/End: Original strand, 6217 - 6276
Alignment:
Q  356 atgaagatctcatacaaaaatatcttgtgcaaagaatttgaagatcttgtacaaaaatat 415  Q
    ||||| |||||||||||||||||| |||| ||| ||||||||||||||||||||| ||||    
T  6217 atgaatatctcatacaaaaatatcatgtgtaaaaaatttgaagatcttgtacaaatatat 6276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0447; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 356 - 415
Target Start/End: Original strand, 10831 - 10890
Alignment:
Q  356 atgaagatctcatacaaaaatatcttgtgcaaagaatttgaagatcttgtacaaaaatat 415  Q
    ||||| |||||||||||||||||| |||| ||| ||||||||||||||||||||| ||||    
T  10831 atgaatatctcatacaaaaatatcatgtgtaaaaaatttgaagatcttgtacaaatatat 10890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0447; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 299 - 353
Target Start/End: Original strand, 6132 - 6186
Alignment:
Q  299 aaagatggagtcttggagcaaaagaaataagaattagagctgattcatgccaaaa 353  Q
    |||||| ||||||||||||||||||||  |||||| |||||||||| ||||||||    
T  6132 aaagattgagtcttggagcaaaagaaaggagaattggagctgattcgtgccaaaa 6186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0447; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 299 - 353
Target Start/End: Original strand, 10746 - 10800
Alignment:
Q  299 aaagatggagtcttggagcaaaagaaataagaattagagctgattcatgccaaaa 353  Q
    |||||| ||||||||||||||||||||  |||||| |||||||||| ||||||||    
T  10746 aaagattgagtcttggagcaaaagaaaggagaattggagctgattcgtgccaaaa 10800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0383 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 2)
Name: scaffold0383
Description:

Target: scaffold0383; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 356 - 415
Target Start/End: Original strand, 8826 - 8885
Alignment:
Q  356 atgaagatctcatacaaaaatatcttgtgcaaagaatttgaagatcttgtacaaaaatat 415  Q
    ||||| |||||||||||||||||| |||| ||| ||||||||||||||||||||| ||||    
T  8826 atgaatatctcatacaaaaatatcatgtgtaaaaaatttgaagatcttgtacaaatatat 8885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0383; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 299 - 353
Target Start/End: Original strand, 8741 - 8795
Alignment:
Q  299 aaagatggagtcttggagcaaaagaaataagaattagagctgattcatgccaaaa 353  Q
    |||||| ||||||||||||||||||||  |||||| |||||||||| ||||||||    
T  8741 aaagattgagtcttggagcaaaagaaaggagaattggagctgattcgtgccaaaa 8795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0213 (Bit Score: 38; Significance: 0.000000000003; HSPs: 2)
Name: scaffold0213
Description:

Target: scaffold0213; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 299 - 387
Target Start/End: Original strand, 26667 - 26756
Alignment:
Q  299 aaagatggagtcttggagcaaaagaaataagaattagagctgattcatgccaaaatcat-gaagatctcatacaaaaatatcttgtgcaa 387  Q
    |||||| ||||||||||||||||||||  |||||| ||| |||||| ||||||||  ||  ||||||| |||||||||||||| ||||||    
T  26667 aaagattgagtcttggagcaaaagaaaggagaattggagttgattcgtgccaaaaatataaaagatcttatacaaaaatatctggtgcaa 26756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0213; HSP #2
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 299 - 386
Target Start/End: Original strand, 21370 - 21456
Alignment:
Q  299 aaagatggagtcttggagcaaaagaaataagaattagagctgattcatgccaaaatcatgaagatctcatacaaaaatatcttgtgca 386  Q
    |||||| ||||||||||||||||||||  ||| || ||| |||||  ||||||||  |||||||||  ||||||||||||||||||||    
T  21370 aaagattgagtcttggagcaaaagaaaggaga-ttggagttgatttgtgccaaaaatatgaagatcatatacaaaaatatcttgtgca 21456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 298 - 379
Target Start/End: Original strand, 167827 - 167908
Alignment:
Q  298 gaaagatggagtcttggagcaaaagaaataagaattagagctgattcatgccaaaatcatgaagatctcatacaaaaatatc 379  Q
    ||||||| |||||||||||||||||||||| || || ||||||||| | |||||||  ||||||||||  | ||||||||||    
T  167827 gaaagattgagtcttggagcaaaagaaataggatttggagctgattgaggccaaaaatatgaagatcttgtgcaaaaatatc 167908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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