View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15373_high_6 (Length: 324)
Name: NF15373_high_6
Description: NF15373
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15373_high_6 |
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Alignment Details
Target: chr8 (Bit Score: 93; Significance: 3e-45; HSPs: 2)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 188 - 308
Target Start/End: Original strand, 22197563 - 22197682
Alignment:
| Q |
188 |
aaaccataaccttaaggtctcacggtctaatattttgtcgaatttttaaaacattcgattttatgtaaatgtgagctaaaataacagatcataggaaaac |
287 |
Q |
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| T |
22197563 |
aaaccataaccttaaggtctcacggtctaatattttgtccaatttttaaaacattag-ttttatgtaaatgtgagctaaaaaaacagatcataggaaaac |
22197661 |
T |
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| Q |
288 |
atgaccgacctatgaagcacg |
308 |
Q |
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|||||| |||||| ||||||| |
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| T |
22197662 |
atgaccaacctataaagcacg |
22197682 |
T |
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Target: chr8; HSP #2
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 17 - 108
Target Start/End: Original strand, 22197373 - 22197464
Alignment:
| Q |
17 |
aatgggaatcggccaattcgccggtattaaatccgctggttgatttaatctcagttatacaataggttgaaccagttgaagtgactcatctg |
108 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |
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| T |
22197373 |
aatgggaatcggccaattcgccggtattaaatccgctggttgatttaatctcagttatacaataggttgaaccagttgaagtgactcgtctg |
22197464 |
T |
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