View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF15373_low_15 (Length: 253)

Name: NF15373_low_15
Description: NF15373
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF15373_low_15
NF15373_low_15
[»] chr2 (43 HSPs)
chr2 (1-235)||(18420255-18420491)
chr2 (5-130)||(30717458-30717583)
chr2 (5-116)||(44860326-44860437)
chr2 (8-129)||(37419752-37419873)
chr2 (14-102)||(32749781-32749869)
chr2 (1-44)||(21782832-21782875)
chr2 (6-62)||(12668419-12668475)
chr2 (5-45)||(21616768-21616808)
chr2 (5-73)||(24975310-24975378)
chr2 (14-130)||(35056883-35056999)
chr2 (6-129)||(26769518-26769641)
chr2 (5-56)||(42832278-42832329)
chr2 (6-56)||(5367199-5367249)
chr2 (5-55)||(23718032-23718082)
chr2 (5-55)||(24105704-24105754)
chr2 (7-73)||(36281693-36281759)
chr2 (7-107)||(2331802-2331900)
chr2 (5-73)||(18889576-18889644)
chr2 (5-45)||(28677915-28677955)
chr2 (17-129)||(34784911-34785023)
chr2 (1-45)||(35449515-35449559)
chr2 (5-37)||(37411265-37411297)
chr2 (5-56)||(2438721-2438772)
chr2 (5-44)||(18276527-18276566)
chr2 (7-46)||(23921261-23921300)
chr2 (6-45)||(25846748-25846787)
chr2 (1-44)||(31284050-31284093)
chr2 (5-56)||(34691807-34691858)
chr2 (5-56)||(34714219-34714270)
chr2 (6-61)||(36756341-36756396)
chr2 (7-58)||(39279683-39279734)
chr2 (6-116)||(15657871-15657981)
chr2 (5-43)||(24894395-24894433)
chr2 (7-53)||(30404855-30404901)
chr2 (7-52)||(10535765-10535810)
chr2 (5-78)||(11223843-11223916)
chr2 (1-34)||(27084264-27084297)
chr2 (7-44)||(28412358-28412395)
chr2 (20-73)||(28524447-28524500)
chr2 (1-54)||(30527599-30527652)
chr2 (5-58)||(31808083-31808136)
chr2 (6-62)||(18622613-18622669)
chr2 (12-56)||(38355889-38355933)
[»] scaffold0008 (1 HSPs)
scaffold0008 (1-116)||(263314-263429)
[»] scaffold0044 (1 HSPs)
scaffold0044 (8-116)||(53189-53297)
[»] chr7 (59 HSPs)
chr7 (5-115)||(24339648-24339758)
chr7 (5-129)||(5409771-5409889)
chr7 (5-116)||(26033403-26033514)
chr7 (7-130)||(38134334-38134457)
chr7 (1-44)||(12289116-12289159)
chr7 (7-78)||(15902830-15902901)
chr7 (5-56)||(19992007-19992058)
chr7 (19-110)||(27229259-27229350)
chr7 (7-136)||(1433462-1433585)
chr7 (7-105)||(7438714-7438812)
chr7 (5-86)||(29787343-29787422)
chr7 (5-116)||(32287416-32287516)
chr7 (5-78)||(32308126-32308199)
chr7 (2-62)||(7328687-7328747)
chr7 (6-62)||(27945048-27945104)
chr7 (5-56)||(1401031-1401082)
chr7 (5-44)||(2424620-2424659)
chr7 (6-89)||(11665409-11665492)
chr7 (5-56)||(20549797-20549848)
chr7 (5-56)||(21880158-21880209)
chr7 (12-62)||(22602706-22602756)
chr7 (7-64)||(5233637-5233694)
chr7 (1-62)||(16341498-16341559)
chr7 (7-76)||(23128643-23128712)
chr7 (1-34)||(45056925-45056958)
chr7 (1-73)||(3142063-3142135)
chr7 (4-56)||(3721098-3721150)
chr7 (5-45)||(17851437-17851477)
chr7 (7-83)||(26329357-26329433)
chr7 (5-57)||(27093414-27093466)
chr7 (5-57)||(27184835-27184887)
chr7 (6-73)||(6630897-6630964)
chr7 (9-56)||(9482944-9482991)
chr7 (9-73)||(11272571-11272637)
chr7 (5-44)||(14729707-14729746)
chr7 (5-64)||(18215180-18215239)
chr7 (5-56)||(19206056-19206107)
chr7 (6-45)||(22868049-22868088)
chr7 (5-56)||(25481908-25481959)
chr7 (5-56)||(28155576-28155627)
chr7 (4-43)||(30813817-30813856)
chr7 (6-56)||(3991331-3991381)
chr7 (6-56)||(5835254-5835304)
chr7 (7-73)||(9408319-9408385)
chr7 (5-43)||(23191902-23191940)
chr7 (8-42)||(30731046-30731080)
chr7 (5-130)||(43027403-43027522)
chr7 (19-116)||(2334270-2334366)
chr7 (9-62)||(5548686-5548739)
chr7 (9-62)||(9778510-9778563)
chr7 (7-67)||(18039006-18039067)
chr7 (10-67)||(21828396-21828453)
chr7 (64-129)||(21880206-21880271)
chr7 (7-52)||(43250001-43250046)
chr7 (58-130)||(598256-598328)
chr7 (7-55)||(2425736-2425784)
chr7 (1-45)||(12278837-12278881)
chr7 (10-62)||(17307904-17307956)
chr7 (4-56)||(24146821-24146873)
[»] scaffold0003 (1 HSPs)
scaffold0003 (5-129)||(241600-241724)
[»] chr8 (47 HSPs)
chr8 (6-130)||(15816057-15816181)
chr8 (5-130)||(22651982-22652107)
chr8 (6-116)||(29447052-29447162)
chr8 (5-129)||(29510233-29510357)
chr8 (6-83)||(2572031-2572108)
chr8 (5-129)||(8343322-8343446)
chr8 (1-56)||(13844598-13844653)
chr8 (1-56)||(40332193-40332248)
chr8 (6-56)||(20679397-20679447)
chr8 (1-55)||(31236580-31236634)
chr8 (4-45)||(3025556-3025597)
chr8 (5-78)||(4611540-4611613)
chr8 (1-61)||(11803261-11803321)
chr8 (1-61)||(11927083-11927143)
chr8 (1-45)||(14731714-14731758)
chr8 (5-61)||(25566847-25566903)
chr8 (5-45)||(34897091-34897131)
chr8 (1-56)||(12606831-12606886)
chr8 (6-45)||(14134706-14134745)
chr8 (6-56)||(4948659-4948709)
chr8 (7-56)||(4786340-4786389)
chr8 (1-106)||(12570461-12570565)
chr8 (1-73)||(29776038-29776108)
chr8 (1-69)||(5307063-5307130)
chr8 (5-73)||(7442851-7442919)
chr8 (6-58)||(7658470-7658522)
chr8 (1-61)||(11944667-11944727)
chr8 (5-37)||(18067955-18067987)
chr8 (5-45)||(24362215-24362255)
chr8 (1-45)||(27213549-27213593)
chr8 (5-45)||(39954292-39954332)
chr8 (1-56)||(926790-926845)
chr8 (5-56)||(8342978-8343029)
chr8 (6-45)||(13203648-13203687)
chr8 (5-44)||(37283824-37283863)
chr8 (5-83)||(21465418-21465496)
chr8 (17-83)||(26902150-26902216)
chr8 (64-130)||(36450693-36450759)
chr8 (7-56)||(20873077-20873126)
chr8 (5-89)||(22197711-22197795)
chr8 (7-56)||(24669441-24669490)
chr8 (1-78)||(28745500-28745577)
chr8 (7-56)||(33405386-33405435)
chr8 (7-52)||(44067524-44067569)
chr8 (5-69)||(13436953-13437017)
chr8 (1-73)||(25172683-25172755)
chr8 (6-58)||(26434187-26434239)
[»] chr6 (68 HSPs)
chr6 (5-109)||(16766703-16766807)
chr6 (6-110)||(8365467-8365571)
chr6 (1-64)||(9025488-9025551)
chr6 (5-68)||(34073337-34073400)
chr6 (5-115)||(9107313-9107423)
chr6 (1-62)||(7086797-7086858)
chr6 (6-71)||(9522898-9522963)
chr6 (7-115)||(5970051-5970159)
chr6 (5-129)||(10294113-10294237)
chr6 (10-129)||(10339054-10339174)
chr6 (1-69)||(26562691-26562759)
chr6 (5-56)||(7265595-7265646)
chr6 (1-56)||(7996380-7996435)
chr6 (1-56)||(8022366-8022421)
chr6 (5-116)||(17435205-17435316)
chr6 (7-129)||(25038000-25038122)
chr6 (8-116)||(9629392-9629500)
chr6 (6-62)||(10770670-10770726)
chr6 (5-45)||(19040358-19040398)
chr6 (5-73)||(21395293-21395360)
chr6 (7-129)||(8713987-8714110)
chr6 (1-44)||(8805586-8805629)
chr6 (5-64)||(9027184-9027243)
chr6 (1-56)||(21924937-21924992)
chr6 (58-129)||(28715343-28715414)
chr6 (5-56)||(32511668-32511719)
chr6 (6-56)||(853861-853911)
chr6 (6-52)||(2117083-2117129)
chr6 (1-83)||(9195729-9195811)
chr6 (7-73)||(9617442-9617508)
chr6 (6-116)||(31384927-31385036)
chr6 (6-56)||(34595141-34595191)
chr6 (7-112)||(4118279-4118384)
chr6 (1-58)||(13364705-13364762)
chr6 (7-44)||(31579239-31579276)
chr6 (5-45)||(9658885-9658925)
chr6 (7-47)||(17341675-17341715)
chr6 (5-45)||(30866157-30866197)
chr6 (5-56)||(7377985-7378036)
chr6 (5-56)||(7938122-7938173)
chr6 (5-56)||(7977832-7977883)
chr6 (10-45)||(13360385-13360420)
chr6 (6-57)||(16833315-16833366)
chr6 (5-56)||(28152105-28152155)
chr6 (7-58)||(32299283-32299334)
chr6 (1-56)||(33001291-33001346)
chr6 (7-45)||(5462694-5462732)
chr6 (7-45)||(7569181-7569219)
chr6 (1-35)||(7723273-7723307)
chr6 (6-56)||(7801158-7801208)
chr6 (11-45)||(11591883-11591917)
chr6 (8-46)||(16388245-16388283)
chr6 (17-83)||(16488565-16488631)
chr6 (6-56)||(19044471-19044521)
chr6 (1-34)||(43718-43751)
chr6 (7-56)||(5732512-5732561)
chr6 (5-62)||(12696330-12696387)
chr6 (5-62)||(20576629-20576686)
chr6 (93-130)||(32839570-32839607)
chr6 (5-45)||(1532246-1532286)
chr6 (49-129)||(3209438-3209518)
chr6 (5-61)||(3398625-3398680)
chr6 (1-45)||(8389485-8389529)
chr6 (1-45)||(12686408-12686451)
chr6 (5-45)||(13851742-13851782)
chr6 (1-61)||(24138428-24138488)
chr6 (5-53)||(31959165-31959213)
chr6 (6-73)||(34290064-34290129)
[»] chr5 (53 HSPs)
chr5 (5-117)||(19579707-19579819)
chr5 (5-131)||(7677711-7677837)
chr5 (5-129)||(39698547-39698671)
chr5 (5-116)||(3966509-3966620)
chr5 (7-127)||(23015926-23016040)
chr5 (7-110)||(30098334-30098437)
chr5 (1-72)||(41091243-41091314)
chr5 (5-107)||(21522756-21522858)
chr5 (5-107)||(21533322-21533424)
chr5 (6-107)||(21542037-21542138)
chr5 (7-56)||(28588676-28588725)
chr5 (5-45)||(6471902-6471942)
chr5 (5-116)||(31084329-31084434)
chr5 (1-56)||(16203797-16203852)
chr5 (5-56)||(21191058-21191109)
chr5 (6-125)||(30183556-30183675)
chr5 (5-56)||(30502390-30502441)
chr5 (5-56)||(30542733-30542784)
chr5 (6-56)||(6247629-6247679)
chr5 (7-73)||(13287385-13287450)
chr5 (1-62)||(43001802-43001863)
chr5 (5-45)||(17593735-17593775)
chr5 (1-45)||(18421854-18421898)
chr5 (1-33)||(26716146-26716178)
chr5 (1-33)||(26985886-26985918)
chr5 (5-61)||(36838549-36838605)
chr5 (5-52)||(21576751-21576798)
chr5 (1-68)||(22423802-22423869)
chr5 (10-45)||(24273043-24273078)
chr5 (10-45)||(24389136-24389171)
chr5 (6-45)||(35017044-35017083)
chr5 (1-64)||(39205882-39205945)
chr5 (5-56)||(42893366-42893417)
chr5 (7-45)||(5467991-5468029)
chr5 (17-83)||(6401516-6401582)
chr5 (5-83)||(11685945-11686022)
chr5 (7-57)||(19737483-19737533)
chr5 (17-83)||(21814279-21814345)
chr5 (4-58)||(23012408-23012462)
chr5 (5-43)||(27932241-27932279)
chr5 (7-56)||(2548395-2548444)
chr5 (5-58)||(17123054-17123107)
chr5 (9-42)||(19438353-19438386)
chr5 (4-45)||(21194136-21194177)
chr5 (7-52)||(25863212-25863257)
chr5 (7-52)||(31264446-31264491)
chr5 (6-47)||(38464375-38464416)
chr5 (5-45)||(12927660-12927700)
chr5 (5-53)||(14674275-14674323)
chr5 (5-56)||(19820398-19820447)
chr5 (5-45)||(27144469-27144509)
chr5 (5-129)||(32766872-32766996)
chr5 (6-46)||(40131628-40131668)
[»] chr3 (60 HSPs)
chr3 (5-129)||(34185052-34185176)
chr3 (6-129)||(17005548-17005671)
chr3 (6-129)||(41961579-41961702)
chr3 (5-116)||(4987233-4987344)
chr3 (6-129)||(14209120-14209243)
chr3 (5-109)||(8039784-8039888)
chr3 (6-78)||(34910324-34910396)
chr3 (6-116)||(14216899-14217009)
chr3 (6-116)||(14223028-14223138)
chr3 (5-56)||(8383263-8383314)
chr3 (7-78)||(16789020-16789091)
chr3 (6-129)||(28812522-28812645)
chr3 (6-68)||(24633773-24633835)
chr3 (5-62)||(25948883-25948940)
chr3 (5-46)||(32429392-32429433)
chr3 (5-129)||(34307715-34307833)
chr3 (1-45)||(9624643-9624687)
chr3 (4-44)||(11251983-11252023)
chr3 (1-45)||(11313813-11313857)
chr3 (5-105)||(14832105-14832205)
chr3 (1-65)||(30994875-30994939)
chr3 (5-56)||(7928456-7928507)
chr3 (1-44)||(27277852-27277895)
chr3 (5-56)||(28918007-28918058)
chr3 (5-55)||(26508116-26508166)
chr3 (6-83)||(750593-750670)
chr3 (7-48)||(14840301-14840342)
chr3 (5-62)||(49651782-49651839)
chr3 (5-73)||(1509545-1509613)
chr3 (6-62)||(9800047-9800103)
chr3 (5-45)||(10690275-10690315)
chr3 (5-45)||(49505167-49505207)
chr3 (9-56)||(8789552-8789599)
chr3 (6-45)||(11493374-11493413)
chr3 (6-45)||(12704014-12704053)
chr3 (7-78)||(16192730-16192801)
chr3 (1-56)||(25093504-25093559)
chr3 (1-36)||(45451555-45451590)
chr3 (5-56)||(51206355-51206406)
chr3 (7-70)||(55212971-55213033)
chr3 (5-62)||(5441029-5441084)
chr3 (6-56)||(10954959-10955009)
chr3 (5-106)||(14829696-14829797)
chr3 (7-73)||(15796279-15796345)
chr3 (8-58)||(20503474-20503524)
chr3 (2-56)||(20691322-20691376)
chr3 (7-45)||(32804553-32804591)
chr3 (6-56)||(55401082-55401132)
chr3 (5-42)||(14979187-14979224)
chr3 (8-45)||(15812834-15812871)
chr3 (5-54)||(21256990-21257039)
chr3 (7-52)||(24205047-24205092)
chr3 (5-45)||(1438810-1438850)
chr3 (5-37)||(3164046-3164078)
chr3 (5-53)||(4990972-4991020)
chr3 (5-45)||(5407260-5407300)
chr3 (58-110)||(10955000-10955052)
chr3 (5-61)||(11665950-11666006)
chr3 (5-45)||(13620777-13620817)
chr3 (6-58)||(29508451-29508503)
[»] chr1 (72 HSPs)
chr1 (5-127)||(1486646-1486762)
chr1 (6-129)||(9828051-9828174)
chr1 (7-129)||(47989505-47989627)
chr1 (7-116)||(6612113-6612222)
chr1 (6-131)||(32461391-32461515)
chr1 (9-78)||(44482240-44482309)
chr1 (9-78)||(25361896-25361965)
chr1 (6-66)||(24577178-24577238)
chr1 (1-45)||(40181873-40181917)
chr1 (7-58)||(1864880-1864931)
chr1 (5-56)||(36878467-36878518)
chr1 (5-78)||(9629880-9629953)
chr1 (5-73)||(5376485-5376553)
chr1 (6-62)||(7918207-7918263)
chr1 (1-45)||(19324564-19324608)
chr1 (5-53)||(31015049-31015097)
chr1 (5-73)||(36906003-36906071)
chr1 (5-129)||(5944287-5944413)
chr1 (6-61)||(10572586-10572641)
chr1 (5-64)||(20157344-20157403)
chr1 (1-44)||(25452162-25452205)
chr1 (6-45)||(34298443-34298482)
chr1 (5-43)||(23738684-23738722)
chr1 (11-61)||(25272494-25272544)
chr1 (19-109)||(30173711-30173801)
chr1 (5-71)||(34371720-34371785)
chr1 (5-110)||(40917757-40917860)
chr1 (5-62)||(113305-113362)
chr1 (5-62)||(6427356-6427413)
chr1 (5-42)||(12443476-12443513)
chr1 (1-62)||(34712379-34712440)
chr1 (7-56)||(40258935-40258984)
chr1 (5-45)||(398778-398818)
chr1 (6-62)||(1704988-1705044)
chr1 (5-37)||(2896142-2896174)
chr1 (6-58)||(10233260-10233312)
chr1 (1-45)||(13436460-13436504)
chr1 (8-56)||(18337338-18337386)
chr1 (5-129)||(18556385-18556509)
chr1 (1-45)||(19562634-19562678)
chr1 (5-73)||(21038089-21038157)
chr1 (9-45)||(25098568-25098604)
chr1 (5-56)||(5898268-5898319)
chr1 (5-56)||(9709826-9709877)
chr1 (6-45)||(14332655-14332694)
chr1 (5-56)||(22515889-22515940)
chr1 (5-73)||(31694695-31694765)
chr1 (58-129)||(37598879-37598950)
chr1 (1-56)||(38075972-38076027)
chr1 (5-56)||(38078663-38078714)
chr1 (5-56)||(38503326-38503377)
chr1 (5-56)||(41877472-41877523)
chr1 (5-67)||(8010278-8010340)
chr1 (7-129)||(16164244-16164366)
chr1 (6-56)||(22881618-22881668)
chr1 (5-43)||(27471581-27471619)
chr1 (6-56)||(37598839-37598888)
chr1 (6-56)||(42359451-42359501)
chr1 (5-34)||(1262890-1262919)
chr1 (5-58)||(21378584-21378637)
chr1 (2-43)||(37055871-37055912)
chr1 (5-37)||(10474998-10475030)
chr1 (6-106)||(12707825-12707925)
chr1 (1-37)||(15641051-15641087)
chr1 (5-45)||(16927198-16927238)
chr1 (5-73)||(17754317-17754385)
chr1 (5-37)||(17831552-17831584)
chr1 (5-37)||(19909303-19909335)
chr1 (2-46)||(23531790-23531834)
chr1 (5-37)||(26238133-26238165)
chr1 (1-37)||(29229463-29229499)
chr1 (5-37)||(40285675-40285707)
[»] chr4 (54 HSPs)
chr4 (5-107)||(30982829-30982931)
chr4 (19-129)||(22234819-22234929)
chr4 (2-116)||(30838213-30838327)
chr4 (5-56)||(8423720-8423771)
chr4 (6-129)||(19482675-19482798)
chr4 (6-129)||(24613630-24613753)
chr4 (6-56)||(54580025-54580075)
chr4 (5-58)||(29205450-29205503)
chr4 (5-116)||(3947714-3947819)
chr4 (6-45)||(36635331-36635370)
chr4 (1-44)||(56257935-56257978)
chr4 (7-45)||(903930-903968)
chr4 (7-73)||(7012074-7012140)
chr4 (7-45)||(22440613-22440651)
chr4 (7-56)||(5775360-5775409)
chr4 (5-62)||(11596348-11596405)
chr4 (1-73)||(14126095-14126168)
chr4 (1-62)||(15659756-15659817)
chr4 (1-45)||(15029767-15029811)
chr4 (5-45)||(40613456-40613496)
chr4 (5-44)||(16184823-16184862)
chr4 (5-44)||(16189715-16189754)
chr4 (1-44)||(17425403-17425446)
chr4 (2-45)||(18576050-18576093)
chr4 (1-44)||(21873385-21873428)
chr4 (1-44)||(21929246-21929289)
chr4 (5-56)||(21945509-21945560)
chr4 (5-56)||(23292988-23293039)
chr4 (5-56)||(28964250-28964301)
chr4 (6-56)||(4157157-4157206)
chr4 (6-56)||(7214524-7214574)
chr4 (6-56)||(12797340-12797389)
chr4 (7-45)||(24343515-24343553)
chr4 (6-56)||(35157987-35158037)
chr4 (1-47)||(35161038-35161084)
chr4 (7-56)||(6485613-6485662)
chr4 (8-45)||(9996849-9996886)
chr4 (5-62)||(12895112-12895169)
chr4 (58-131)||(12895212-12895285)
chr4 (7-56)||(12895276-12895325)
chr4 (1-62)||(13134452-13134513)
chr4 (1-54)||(26504303-26504356)
chr4 (7-44)||(32910559-32910596)
chr4 (5-34)||(34200295-34200324)
chr4 (5-42)||(38148741-38148778)
chr4 (7-56)||(40179638-40179687)
chr4 (5-73)||(847957-848025)
chr4 (5-45)||(1747218-1747258)
chr4 (9-73)||(5225598-5225662)
chr4 (4-36)||(7670689-7670721)
chr4 (2-34)||(12077831-12077863)
chr4 (5-37)||(30522936-30522968)
chr4 (1-45)||(35952630-35952674)
chr4 (5-56)||(49431031-49431083)
[»] scaffold0306 (1 HSPs)
scaffold0306 (6-56)||(13407-13457)
[»] scaffold0152 (1 HSPs)
scaffold0152 (6-56)||(21870-21920)
[»] scaffold0123 (1 HSPs)
scaffold0123 (5-129)||(44454-44578)
[»] scaffold0020 (1 HSPs)
scaffold0020 (1-64)||(135306-135369)
[»] scaffold0171 (2 HSPs)
scaffold0171 (19-129)||(23531-23641)
scaffold0171 (19-62)||(23440-23483)
[»] scaffold0136 (1 HSPs)
scaffold0136 (7-116)||(3791-3900)
[»] scaffold0122 (1 HSPs)
scaffold0122 (1-116)||(8668-8783)
[»] scaffold0049 (1 HSPs)
scaffold0049 (5-56)||(63779-63830)
[»] scaffold0036 (1 HSPs)
scaffold0036 (6-116)||(9689-9799)
[»] scaffold0652 (1 HSPs)
scaffold0652 (1-56)||(464-519)
[»] scaffold0007 (1 HSPs)
scaffold0007 (7-116)||(225210-225319)
[»] scaffold0236 (1 HSPs)
scaffold0236 (7-61)||(25765-25819)
[»] scaffold0223 (1 HSPs)
scaffold0223 (5-62)||(20178-20235)
[»] scaffold0050 (1 HSPs)
scaffold0050 (7-56)||(70286-70335)
[»] scaffold0512 (1 HSPs)
scaffold0512 (58-130)||(4975-5047)
[»] scaffold0004 (1 HSPs)
scaffold0004 (5-61)||(92813-92869)
[»] scaffold0450 (1 HSPs)
scaffold0450 (6-129)||(8564-8687)
[»] scaffold0110 (1 HSPs)
scaffold0110 (7-62)||(28858-28913)
[»] scaffold0103 (1 HSPs)
scaffold0103 (5-43)||(51817-51855)
[»] scaffold0022 (1 HSPs)
scaffold0022 (7-45)||(90851-90889)
[»] scaffold0011 (1 HSPs)
scaffold0011 (6-56)||(17751-17801)
[»] scaffold0361 (1 HSPs)
scaffold0361 (6-43)||(14537-14574)
[»] scaffold0086 (1 HSPs)
scaffold0086 (19-116)||(2948-3045)
[»] scaffold0027 (1 HSPs)
scaffold0027 (7-56)||(46690-46739)
[»] scaffold1528 (1 HSPs)
scaffold1528 (5-73)||(1041-1109)
[»] scaffold0085 (1 HSPs)
scaffold0085 (6-34)||(26400-26428)
[»] scaffold0021 (1 HSPs)
scaffold0021 (7-55)||(130490-130538)


Alignment Details
Target: chr2 (Bit Score: 202; Significance: 1e-110; HSPs: 43)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 202; E-Value: 1e-110
Query Start/End: Original strand, 1 - 235
Target Start/End: Complemental strand, 18420491 - 18420255
Alignment:
Q  1 cactgctaataatttgagaaaatcacataattcagtgcaattataagggtcggtgttgtgtccgtgtcggacatgacaagtgttcgacattaggacacgc 100  Q
    |||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||| |||||||||||||||||||||||||||| |||||||    
T  18420491 cactgctaataatttgagaaaatcacataattcaatgcaattataagtgtcggtgttgtgtccatgtcggacatgacaagtgttcgacattatgacacgc 18420392  T
Q  101 ctaatccgagaagtgtatgagcttcatag--cacgtaatttataaatacatttgtcagactatatttcatcaaatacgggactcttaacaagtgattttt 198  Q
    |||||||||||||||| || |||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18420391 ctaatccgagaagtgtctgtgcttcatagcacacgtaatttataaatacatttgtcagactatatttcatcaaatacgggactcttaacaagtgattttt 18420292  T
Q  199 tcgtgcagtcggatgcggtgtttgaacttatcttgga 235  Q
    |||||||||||||||||||||||||||||||||||||    
T  18420291 tcgtgcagtcggatgcggtgtttgaacttatcttgga 18420255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 5 - 130
Target Start/End: Complemental strand, 30717583 - 30717458
Alignment:
Q  5 gctaataatttgagaaaatcacataattcagtgcaattataagggtcggtgttgtgtccgtgtcggacatgacaagtgttcgacattaggacacgcctaa 104  Q
    ||||||||||||| ||||||||||||||||||| ||||| ||| |||| ||| |||||  ||||||||| |||| |||||||||| | ||| ||||||||    
T  30717583 gctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcgatgtcgtgtcgttgtcggacacgacacgtgttcgacactgggatacgcctaa 30717484  T
Q  105 tccgagaagtgtatgagcttcatagc 130  Q
    ||| || |||||  | ||||||||||    
T  30717483 tccaaggagtgtccgtgcttcatagc 30717458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 5 - 116
Target Start/End: Original strand, 44860326 - 44860437
Alignment:
Q  5 gctaataatttgagaaaatcacataattcagtgcaattataagggtcggtgttgtgtccgtgtcggacatgacaagtgttcgacattaggacacgcctaa 104  Q
    |||||||||||||||||||| |||||||||||| ||||||| | |||||||| ||||  |||| ||||| |||| |||| ||||||  |||||| |||||    
T  44860326 gctaataatttgagaaaatcgcataattcagtgtaattatatgtgtcggtgtcgtgttggtgttggacacgacatgtgtccgacatcgggacacacctaa 44860425  T
Q  105 tccgagaagtgt 116  Q
    | |||| |||||    
T  44860426 ttcgaggagtgt 44860437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 8 - 129
Target Start/End: Original strand, 37419752 - 37419873
Alignment:
Q  8 aataatttgagaaaatcacataattcagtgcaattataagggtcggtgttgtgtccgtgtcggacatgacaagtgttcgacattaggacacgcctaatcc 107  Q
    |||||||||| ||||||||| ||||||||| ||||| ||| | |||||| ||||| |||||||||| ||   |||| |||||   |||||||||||||||    
T  37419752 aataatttgaaaaaatcacaaaattcagtgtaattacaagtgccggtgtcgtgtcggtgtcggacacgatgcgtgtccgacaccgggacacgcctaatcc 37419851  T
Q  108 gagaagtgtatgagcttcatag 129  Q
    ||| |||||  | |||||||||    
T  37419852 gaggagtgtccgtgcttcatag 37419873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 14 - 102
Target Start/End: Complemental strand, 32749869 - 32749781
Alignment:
Q  14 ttgagaaaatcacataattcagtgcaattataagggtcggtgttgtgtccgtgtcggacatgacaagtgttcgacattaggacacgcct 102  Q
    |||||||||||||||||||||||| ||| ||||| ||| |||| |||||  |||||||| ||||| |||| ||||| | ||||||||||    
T  32749869 ttgagaaaatcacataattcagtgtaataataagtgtcagtgtcgtgtcgatgtcggacgtgacatgtgtccgacactgggacacgcct 32749781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 21782875 - 21782832
Alignment:
Q  1 cactgctaataatttgagaaaatcacataattcagtgcaattat 44  Q
    ||||||||||||||||||||||||||||||||||||| ||||||    
T  21782875 cactgctaataatttgagaaaatcacataattcagtgtaattat 21782832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 6 - 62
Target Start/End: Complemental strand, 12668475 - 12668419
Alignment:
Q  6 ctaataatttgagaaaatcacataattcagtgcaattataagggtcggtgttgtgtc 62  Q
    |||||||||||| ||||| ||||||||||||| ||||||||| |||||||| |||||    
T  12668475 ctaataatttgaaaaaatgacataattcagtgtaattataagtgtcggtgtcgtgtc 12668419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 5 - 45
Target Start/End: Original strand, 21616768 - 21616808
Alignment:
Q  5 gctaataatttgagaaaatcacataattcagtgcaattata 45  Q
    ||||||||||||||||||||||||||||||||| |||||||    
T  21616768 gctaataatttgagaaaatcacataattcagtgtaattata 21616808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 5 - 73
Target Start/End: Complemental strand, 24975378 - 24975310
Alignment:
Q  5 gctaataatttgagaaaatcacataattcagtgcaattataagggtcggtgttgtgtccgtgtcggaca 73  Q
    ||||||||||||||||||||  ||||||||||| || |||| | |||||||| ||||||||||| ||||    
T  24975378 gctaataatttgagaaaatcgtataattcagtgtaaatatatgcgtcggtgtcgtgtccgtgtcagaca 24975310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 14 - 130
Target Start/End: Original strand, 35056883 - 35056999
Alignment:
Q  14 ttgagaaaatcacataattcagtgcaattataagggtcggtgttgtgtccgtgtcggacatgacaagtgttcgacattaggacacgcctaatccgagaag 113  Q
    ||||||||| || ||||||||||| ||||||| | |||||||| ||||| |||||||||| |||| |||| |||||     |||||||||||| ||| ||    
T  35056883 ttgagaaaaccatataattcagtgtaattatatgtgtcggtgtcgtgtcggtgtcggacacgacacgtgtccgacacggaaacacgcctaatctgaggag 35056982  T
Q  114 tgtatgagcttcatagc 130  Q
    |||  | ||||||||||    
T  35056983 tgtccgtgcttcatagc 35056999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 6 - 129
Target Start/End: Original strand, 26769518 - 26769641
Alignment:
Q  6 ctaataatttgagaaaatcacataattcagtgcaattataagggtcggtgttgtgtccgtgtcggacatgacaagtgttcgacattaggacacgcctaat 105  Q
    |||||||||||| || ||||||| ||   ||| ||||| ||| ||||||||  |||| || ||||||| |||| |||| ||||| | |||||||||||||    
T  26769518 ctaataatttgaaaatatcacattatctggtgtaattacaagtgtcggtgtcatgtcggtatcggacacgacacgtgtccgacactgggacacgcctaat 26769617  T
Q  106 ccgagaagtgtatgagcttcatag 129  Q
    ||||| |||||  | |||||||||    
T  26769618 ccgaggagtgtccgtgcttcatag 26769641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 5 - 56
Target Start/End: Complemental strand, 42832329 - 42832278
Alignment:
Q  5 gctaataatttgagaaaatcacataattcagtgcaattataagggtcggtgt 56  Q
    ||||||||||||||||||| ||||| ||||||| ||||||||| ||||||||    
T  42832329 gctaataatttgagaaaattacatatttcagtgtaattataagtgtcggtgt 42832278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 6 - 56
Target Start/End: Original strand, 5367199 - 5367249
Alignment:
Q  6 ctaataatttgagaaaatcacataattcagtgcaattataagggtcggtgt 56  Q
    ||||||||||||| |||||||||||||||||| ||||||| | ||||||||    
T  5367199 ctaataatttgaggaaatcacataattcagtgtaattatatgtgtcggtgt 5367249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 5 - 55
Target Start/End: Original strand, 23718032 - 23718082
Alignment:
Q  5 gctaataatttgagaaaatcacataattcagtgcaattataagggtcggtg 55  Q
    ||||||||||||||||| ||||||||||||||| ||||||| | |||||||    
T  23718032 gctaataatttgagaaagtcacataattcagtgtaattatatgtgtcggtg 23718082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 5 - 55
Target Start/End: Original strand, 24105704 - 24105754
Alignment:
Q  5 gctaataatttgagaaaatcacataattcagtgcaattataagggtcggtg 55  Q
    ||||||||||||||||| ||||||||||||||| ||||||| | |||||||    
T  24105704 gctaataatttgagaaagtcacataattcagtgtaattatatgtgtcggtg 24105754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 7 - 73
Target Start/End: Original strand, 36281693 - 36281759
Alignment:
Q  7 taataatttgagaaaatcacataattcagtgcaattataagggtcggtgttgtgtccgtgtcggaca 73  Q
    |||||||||||||||||||||||||| |||| ||| ||| |  ||| ||| ||||||||||||||||    
T  36281693 taataatttgagaaaatcacataatttagtgtaatcatatgtttcgatgtggtgtccgtgtcggaca 36281759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 7 - 107
Target Start/End: Original strand, 2331802 - 2331900
Alignment:
Q  7 taataatttgagaaaatcacataattcagtgcaattataagggtcggtgttgtgtccgtgtcggacatgacaagtgttcgacattaggacacgcctaatc 106  Q
    ||||||||||||||||||||||||||||||| | ||||  | |||||||| ||||| ||||||| ||   || ||||  ||||  |||||||||||||||    
T  2331802 taataatttgagaaaatcacataattcagtgtatttat--gtgtcggtgtcgtgtcagtgtcgggcacagcacgtgtctgacaccaggacacgcctaatc 2331899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 73
Target Start/End: Complemental strand, 18889644 - 18889576
Alignment:
Q  5 gctaataatttgagaaaatcacataattcagtgcaattataagggtcggtgttgtgtccgtgtcggaca 73  Q
    |||||||| |||||||||||||||||||||||| ||| ||| | ||||||||  |||  ||||||||||    
T  18889644 gctaataaattgagaaaatcacataattcagtgtaatcatatgtgtcggtgtcttgtttgtgtcggaca 18889576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 45
Target Start/End: Original strand, 28677915 - 28677955
Alignment:
Q  5 gctaataatttgagaaaatcacataattcagtgcaattata 45  Q
    ||||||||||||| ||||||||||||||||||| |||||||    
T  28677915 gctaataatttgaaaaaatcacataattcagtgtaattata 28677955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 17 - 129
Target Start/End: Complemental strand, 34785023 - 34784911
Alignment:
Q  17 agaaaatcacataattcagtgcaattataagggtcggtgttgtgtccgtgtcggacatgacaagtgttcgacattaggacacgcctaatccgagaagtgt 116  Q
    |||||||||||||||| |||| ||||||| | |||||||| ||||| || ||||||| ||||  |||  ||||   |||||||||| || |||| |||||    
T  34785023 agaaaatcacataatttagtgtaattatatgtgtcggtgtcgtgtcggtatcggacacgacacctgtctgacacggggacacgccttattcgaggagtgt 34784924  T
Q  117 atgagcttcatag 129  Q
     || |||||||||    
T  34784923 ctgtgcttcatag 34784911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 35449515 - 35449559
Alignment:
Q  1 cactgctaataatttgagaaaatcacataattcagtgcaattata 45  Q
    ||||| ||||||||||||||||||||| ||||||||| |||||||    
T  35449515 cactgttaataatttgagaaaatcacagaattcagtgtaattata 35449559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 37
Target Start/End: Complemental strand, 37411297 - 37411265
Alignment:
Q  5 gctaataatttgagaaaatcacataattcagtg 37  Q
    |||||||||||||||||||||||||||||||||    
T  37411297 gctaataatttgagaaaatcacataattcagtg 37411265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 5 - 56
Target Start/End: Complemental strand, 2438772 - 2438721
Alignment:
Q  5 gctaataatttgagaaaatcacataattcagtgcaattataagggtcggtgt 56  Q
    ||||||||||| | ||||||||||||||||||| ||||| ||| ||||||||    
T  2438772 gctaataatttcaaaaaatcacataattcagtgtaattacaagtgtcggtgt 2438721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 5 - 44
Target Start/End: Original strand, 18276527 - 18276566
Alignment:
Q  5 gctaataatttgagaaaatcacataattcagtgcaattat 44  Q
    |||||||||||||||||||||| |||||||||| ||||||    
T  18276527 gctaataatttgagaaaatcacttaattcagtgtaattat 18276566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 7 - 46
Target Start/End: Original strand, 23921261 - 23921300
Alignment:
Q  7 taataatttgagaaaatcacataattcagtgcaattataa 46  Q
    ||||||||||||||||| ||||||||||||| ||||||||    
T  23921261 taataatttgagaaaattacataattcagtgtaattataa 23921300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 6 - 45
Target Start/End: Original strand, 25846748 - 25846787
Alignment:
Q  6 ctaataatttgagaaaatcacataattcagtgcaattata 45  Q
    ||||||||||||||||||||||| |||||||| |||||||    
T  25846748 ctaataatttgagaaaatcacatgattcagtgtaattata 25846787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 31284050 - 31284093
Alignment:
Q  1 cactgctaataatttgagaaaatcacataattcagtgcaattat 44  Q
    ||||||||||||||||||||||||||||||| || || ||||||    
T  31284050 cactgctaataatttgagaaaatcacataatccattgtaattat 31284093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 5 - 56
Target Start/End: Complemental strand, 34691858 - 34691807
Alignment:
Q  5 gctaataatttgagaaaatcacataattcagtgcaattataagggtcggtgt 56  Q
    ||||||||||||| ||||||| ||||||||||| ||||||| | ||||||||    
T  34691858 gctaataatttgataaaatcatataattcagtgtaattatatgtgtcggtgt 34691807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 5 - 56
Target Start/End: Complemental strand, 34714270 - 34714219
Alignment:
Q  5 gctaataatttgagaaaatcacataattcagtgcaattataagggtcggtgt 56  Q
    ||||||||||||| ||||||| ||||||||||| ||||||| | ||||||||    
T  34714270 gctaataatttgataaaatcatataattcagtgtaattatatgtgtcggtgt 34714219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 6 - 61
Target Start/End: Complemental strand, 36756396 - 36756341
Alignment:
Q  6 ctaataatttgagaaaatcacataattcagtgcaattataagggtcggtgttgtgt 61  Q
    ||||||||||||  |||| ||||||||||||| ||||||||| |||||||| ||||    
T  36756396 ctaataatttgaagaaataacataattcagtgtaattataagtgtcggtgtcgtgt 36756341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 7 - 58
Target Start/End: Original strand, 39279683 - 39279734
Alignment:
Q  7 taataatttgagaaaatcacataattcagtgcaattataagggtcggtgttg 58  Q
    ||||||| ||||||||||| ||||||||||| ||||||| | ||||||||||    
T  39279683 taataatatgagaaaatcaaataattcagtgtaattatatgtgtcggtgttg 39279734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 116
Target Start/End: Original strand, 15657871 - 15657981
Alignment:
Q  6 ctaataatttgagaaaatcacataattcagtgcaattataagggtcggtgttgtgtccgtgtcggacatgacaagtgttcgacattaggacacgcctaat 105  Q
    |||||||||||  ||||||||||||||||||| ||||| ||  |||||||| ||||   ||||||||  |||| |||| ||||    ||||||||||| |    
T  15657871 ctaataatttgtaaaaatcacataattcagtgtaattacaaatgtcggtgtcgtgttgatgtcggacgcgacacgtgtccgacgccgggacacgcctagt 15657970  T
Q  106 ccgagaagtgt 116  Q
    ||||| |||||    
T  15657971 ccgaggagtgt 15657981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 43
Target Start/End: Original strand, 24894395 - 24894433
Alignment:
Q  5 gctaataatttgagaaaatcacataattcagtgcaatta 43  Q
    ||||||||||| | |||||||||||||||||||||||||    
T  24894395 gctaataatttaaaaaaatcacataattcagtgcaatta 24894433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 53
Target Start/End: Complemental strand, 30404901 - 30404855
Alignment:
Q  7 taataatttgagaaaatcacataattcagtgcaattataagggtcgg 53  Q
    ||||||||||| ||||||||||||||||||| ||||| ||| |||||    
T  30404901 taataatttgaaaaaatcacataattcagtgtaattacaagtgtcgg 30404855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 7 - 52
Target Start/End: Complemental strand, 10535810 - 10535765
Alignment:
Q  7 taataatttgagaaaatcacataattcagtgcaattataagggtcg 52  Q
    ||||||||||||||||| ||||||||||||| ||| ||||| ||||    
T  10535810 taataatttgagaaaatgacataattcagtgtaatcataagtgtcg 10535765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 5 - 78
Target Start/End: Complemental strand, 11223916 - 11223843
Alignment:
Q  5 gctaataatttgagaaaatcacataattcagtgcaattataagggtcggtgttgtgtccgtgtcggacatgaca 78  Q
    ||||||| ||||| ||||| ||||||||||||| ||||| ||| ||||||||  |||  |||||||||| ||||    
T  11223916 gctaatattttgaaaaaataacataattcagtgtaattacaagtgtcggtgtcatgtaggtgtcggacacgaca 11223843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 27084264 - 27084297
Alignment:
Q  1 cactgctaataatttgagaaaatcacataattca 34  Q
    ||||||||||||||||||||||||| ||||||||    
T  27084264 cactgctaataatttgagaaaatcatataattca 27084297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 7 - 44
Target Start/End: Original strand, 28412358 - 28412395
Alignment:
Q  7 taataatttgagaaaatcacataattcagtgcaattat 44  Q
    ||||||||||| ||||||||||||||||||| ||||||    
T  28412358 taataatttgataaaatcacataattcagtgtaattat 28412395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 20 - 73
Target Start/End: Original strand, 28524447 - 28524500
Alignment:
Q  20 aaatcacataattcagtgcaattataagggtcggtgttgtgtccgtgtcggaca 73  Q
    |||||||||||||||||| ||||||| | |||| ||||||||  ||||||||||    
T  28524447 aaatcacataattcagtgtaattatatgtgtcgttgttgtgttggtgtcggaca 28524500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 30527652 - 30527599
Alignment:
Q  1 cactgctaataatttgagaaaatcacataattcagtgcaattataagggtcggt 54  Q
    ||||| ||||||||||||||||||| |||||| |||| ||||||| | ||||||    
T  30527652 cactgttaataatttgagaaaatcatataatttagtgtaattatatgtgtcggt 30527599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 5 - 58
Target Start/End: Original strand, 31808083 - 31808136
Alignment:
Q  5 gctaataatttgagaaaatcacataattcagtgcaattataagggtcggtgttg 58  Q
    ||||||||||| | ||||||||||||||||||| ||||||| | ||| ||||||    
T  31808083 gctaataatttaacaaaatcacataattcagtgtaattatatgtgtcagtgttg 31808136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 6 - 62
Target Start/End: Original strand, 18622613 - 18622669
Alignment:
Q  6 ctaataatttgagaaaatcacataattcagtgcaattataagggtcggtgttgtgtc 62  Q
    |||||||||| | ||||||||||||||||||| ||||||| | || ||||| |||||    
T  18622613 ctaataatttaataaaatcacataattcagtgtaattatacgtgttggtgtcgtgtc 18622669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 56
Target Start/End: Complemental strand, 38355933 - 38355889
Alignment:
Q  12 atttgagaaaatcacataattcagtgcaattataagggtcggtgt 56  Q
    ||||||||||||||||||||||||||  |||||| | ||||||||    
T  38355933 atttgagaaaatcacataattcagtgtgattatatgtgtcggtgt 38355889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 60; Significance: 1e-25; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 263429 - 263314
Alignment:
Q  1 cactgctaataatttgagaaaatcacataattcagtgcaattataagggtcggtgttgtgtccgtgtcggacatgacaagtgttcgacattaggacacgc 100  Q
    |||||||||||||||||||||| |||||||||||||| ||||||||| ||| |||| ||||| ||||| |||| |||| |||||||| |  | |||||||    
T  263429 cactgctaataatttgagaaaaccacataattcagtgtaattataagtgtcagtgtcgtgtcggtgtcagacacgacacgtgttcgataccaagacacgc 263330  T
Q  101 ctaatccgagaagtgt 116  Q
    |||||||||| |||||    
T  263329 ctaatccgaggagtgt 263314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044 (Bit Score: 57; Significance: 7e-24; HSPs: 1)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 8 - 116
Target Start/End: Original strand, 53189 - 53297
Alignment:
Q  8 aataatttgagaaaatcacataattcagtgcaattataagggtcggtgttgtgtccgtgtcggacatgacaagtgttcgacattaggacacgcctaatcc 107  Q
    |||||||||||||||||||||||||||||| ||||||||| |||||||  ||||| ||||||||||||||| |||| |||||   |||||||  ||||||    
T  53189 aataatttgagaaaatcacataattcagtgtaattataagtgtcggtgccgtgtcggtgtcggacatgacacgtgtccgacaccgggacacgtttaatcc 53288  T
Q  108 gagaagtgt 116  Q
     ||||||||    
T  53289 aagaagtgt 53297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 55; Significance: 1e-22; HSPs: 59)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 5 - 115
Target Start/End: Original strand, 24339648 - 24339758
Alignment:
Q  5 gctaataatttgagaaaatcacataattcagtgcaattataagggtcggtgttgtgtccgtgtcggacatgacaagtgttcgacattaggacacgcctaa 104  Q
    ||||||||||||| ||||||||||||||||||| ||||| ||| |||||||| ||||| |||||||||| |||| || | |||||   ||||||||||||    
T  24339648 gctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtgtcgtgtcggtgtcggacacgacacgtatccgacaccgggacacgcctaa 24339747  T
Q  105 tccgagaagtg 115  Q
    |||||| ||||    
T  24339748 tccgaggagtg 24339758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 5 - 129
Target Start/End: Complemental strand, 5409889 - 5409771
Alignment:
Q  5 gctaataatttgagaaaatcacataattcagtgcaattataagggtcggtgttgtgtccgtgtcggacatgacaagtgttcgacattaggacacgcctaa 104  Q
    ||||||||||||| ||||||||||||||||||||||||| ||| ||||||||      ||||||||||| |||| |||| |||||   ||||||||||||    
T  5409889 gctaataatttgaaaaaatcacataattcagtgcaattacaagtgtcggtgt------cgtgtcggacacgacacgtgtccgacaccgggacacgcctaa 5409796  T
Q  105 tccgagaagtgtatgagcttcatag 129  Q
    |||||| |||||  | |||||||||    
T  5409795 tccgaggagtgtccgtgcttcatag 5409771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 5 - 116
Target Start/End: Complemental strand, 26033514 - 26033403
Alignment:
Q  5 gctaataatttgagaaaatcacataattcagtgcaattataagggtcggtgttgtgtccgtgtcggacatgacaagtgttcgacattaggacacgcctaa 104  Q
    ||||||||||||| ||||||||||||||||||| ||||| ||| |||||| | ||||| ||||| ||||||||| |||| ||| |    ||||| |||||    
T  26033514 gctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtctcgtgtcggtgtcagacatgacacgtgtccgataccgcgacacacctaa 26033415  T
Q  105 tccgagaagtgt 116  Q
    |||||| |||||    
T  26033414 tccgaggagtgt 26033403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 7 - 130
Target Start/End: Complemental strand, 38134457 - 38134334
Alignment:
Q  7 taataatttgagaaaatcacataattcagtgcaattataagggtcggtgttgtgtccgtgtcggacatgacaagtgttcgacattaggacacgcctaatc 106  Q
    ||||||||||||||||| |||||||||| || ||| ||| | |||||| |  |||  |||| ||||  || |||| ||||||||  ||||||||||||||    
T  38134457 taataatttgagaaaatgacataattcaatgtaatcatatgtgtcggtctcatgtgggtgttggactcgataagtattcgacatcgggacacgcctaatc 38134358  T
Q  107 cgagaagtgtatgagcttcatagc 130  Q
    |||| |||||||| ||||||||||    
T  38134357 cgaggagtgtatgtgcttcatagc 38134334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 12289116 - 12289159
Alignment:
Q  1 cactgctaataatttgagaaaatcacataattcagtgcaattat 44  Q
    ||||||||||||||||||||||||||||||||||||| ||||||    
T  12289116 cactgctaataatttgagaaaatcacataattcagtggaattat 12289159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 7 - 78
Target Start/End: Original strand, 15902830 - 15902901
Alignment:
Q  7 taataatttgagaaaatcacataattcagtgcaattataagggtcggtgttgtgtccgtgtcggacatgaca 78  Q
    ||||||||||| |||||||||||||| |||| ||||||| | |||||||||||||| || ||||||| ||||    
T  15902830 taataatttgataaaatcacataatttagtgtaattatatgtgtcggtgttgtgtcggtatcggacacgaca 15902901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 5 - 56
Target Start/End: Original strand, 19992007 - 19992058
Alignment:
Q  5 gctaataatttgagaaaatcacataattcagtgcaattataagggtcggtgt 56  Q
    ||||||||||||||||||||||||| ||||||| ||||||||| ||||||||    
T  19992007 gctaataatttgagaaaatcacatatttcagtgtaattataagtgtcggtgt 19992058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 19 - 110
Target Start/End: Complemental strand, 27229350 - 27229259
Alignment:
Q  19 aaaatcacataattcagtgcaattataagggtcggtgttgtgtccgtgtcggacatgacaagtgttcgacattaggacacgcctaatccgag 110  Q
    |||||||||||||| |||| |||||||||  ||||||| |||||  |||| |||| || | |||||||||| ||||||||||||||| ||||    
T  27229350 aaaatcacataatttagtgtaattataagtatcggtgtcgtgtcactgtcagacacgatacgtgttcgacactaggacacgcctaattcgag 27229259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 7 - 136
Target Start/End: Original strand, 1433462 - 1433585
Alignment:
Q  7 taataatttgagaaaatcacataattcagtgcaattataagggtcggtgttgtgtccgtgtcggacatgacaagtgttcgacattaggacacgcctaatc 106  Q
    |||||||||||||||||||||| |||  ||| ||||||| | ||||||||      ||||||||||| |||| |||| |||||  |||||||| ||||||    
T  1433462 taataatttgagaaaatcacatcatttggtgtaattatatgtgtcggtgt------cgtgtcggacaagacatgtgtccgacaccaggacacgtctaatc 1433555  T
Q  107 cgagaagtgtatgagcttcatagcacgtaa 136  Q
    |||| |||||  | ||||||||||| ||||    
T  1433556 cgaggagtgtccgtgcttcatagcatgtaa 1433585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 7 - 105
Target Start/End: Original strand, 7438714 - 7438812
Alignment:
Q  7 taataatttgagaaaatcacataattcagtgcaattataagggtcggtgttgtgtccgtgtcggacatgacaagtgttcgacattaggacacgcctaat 105  Q
    ||||||||||| |||||||||||||||| || ||||| ||| ||||||||  |||| |||||  ||| ||||  ||| ||||| |||||||||||||||    
T  7438714 taataatttgaaaaaatcacataattcaatgtaattacaagtgtcggtgtcatgtcggtgtcaaacacgacacatgtgcgacactaggacacgcctaat 7438812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 5 - 86
Target Start/End: Complemental strand, 29787422 - 29787343
Alignment:
Q  5 gctaataatttgagaaaatcacataattcagtgcaattataagggtcggtgttgtgtccgtgtcggacatgacaagtgttcg 86  Q
    ||||||||||||||||||||||||||||||||| ||||||  | || |||||  |||| |||| |||||||||| |||||||    
T  29787422 gctaataatttgagaaaatcacataattcagtgtaattat--gtgttggtgtaatgtcggtgttggacatgacatgtgttcg 29787343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 5 - 116
Target Start/End: Complemental strand, 32287516 - 32287416
Alignment:
Q  5 gctaataatttgagaaaatcacataattcagtgcaattataagggtcggtgttgtgtccgtgtcggacatgacaagtgttcgacattaggacacgcctaa 104  Q
    ||||||||| |||||||||||||||||||||||||| ||||           |||||| |||||||||||||||||||| |||||   |||||| |||||    
T  32287516 gctaataatctgagaaaatcacataattcagtgcaagtata-----------tgtgtcggtgtcggacatgacaagtgtccgacaccgggacacacctaa 32287428  T
Q  105 tccgagaagtgt 116  Q
    |||||| |||||    
T  32287427 tccgaggagtgt 32287416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 5 - 78
Target Start/End: Original strand, 32308126 - 32308199
Alignment:
Q  5 gctaataatttgagaaaatcacataattcagtgcaattataagggtcggtgttgtgtccgtgtcggacatgaca 78  Q
    ||||||||||||||||||||||||||||||||| |||| || | ||| |||| ||||| |||| ||||| ||||    
T  32308126 gctaataatttgagaaaatcacataattcagtgtaattgtatgtgtcagtgtcgtgtcggtgttggacacgaca 32308199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 2 - 62
Target Start/End: Complemental strand, 7328747 - 7328687
Alignment:
Q  2 actgctaataatttgagaaaatcacataattcagtgcaattataagggtcggtgttgtgtc 62  Q
    |||||||||||||||||||||| |||||||| |||| ||||||| | |||||||| |||||    
T  7328747 actgctaataatttgagaaaataacataatttagtgtaattatatgtgtcggtgtcgtgtc 7328687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 6 - 62
Target Start/End: Original strand, 27945048 - 27945104
Alignment:
Q  6 ctaataatttgagaaaatcacataattcagtgcaattataagggtcggtgttgtgtc 62  Q
    |||||||||||||||||| ||||||||||||| ||||| ||| |||||||| |||||    
T  27945048 ctaataatttgagaaaattacataattcagtgtaattacaagtgtcggtgtcgtgtc 27945104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 5 - 56
Target Start/End: Original strand, 1401031 - 1401082
Alignment:
Q  5 gctaataatttgagaaaatcacataattcagtgcaattataagggtcggtgt 56  Q
    ||||||||||||||||| ||||||||||||||| |||||||||  |||||||    
T  1401031 gctaataatttgagaaactcacataattcagtgtaattataagtatcggtgt 1401082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 5 - 44
Target Start/End: Original strand, 2424620 - 2424659
Alignment:
Q  5 gctaataatttgagaaaatcacataattcagtgcaattat 44  Q
    ||||||||||||||||||||||||||||||||| ||||||    
T  2424620 gctaataatttgagaaaatcacataattcagtgtaattat 2424659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 6 - 89
Target Start/End: Complemental strand, 11665492 - 11665409
Alignment:
Q  6 ctaataatttgagaaaatcacataattcagtgcaattataagggtcggtgttgtgtccgtgtcggacatgacaagtgttcgaca 89  Q
    |||||||||||| ||||||||||||||||||  ||||||||| |||| |||  |||| |||||| ||| |||| |||| |||||    
T  11665492 ctaataatttgaaaaaatcacataattcagtctaattataagtgtcgatgtcatgtcggtgtcgaacacgacacgtgtccgaca 11665409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 5 - 56
Target Start/End: Original strand, 20549797 - 20549848
Alignment:
Q  5 gctaataatttgagaaaatcacataattcagtgcaattataagggtcggtgt 56  Q
    |||||||||||||||||||||| |||||||||| ||||||| | ||||||||    
T  20549797 gctaataatttgagaaaatcacgtaattcagtgtaattatatgtgtcggtgt 20549848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 5 - 56
Target Start/End: Original strand, 21880158 - 21880209
Alignment:
Q  5 gctaataatttgagaaaatcacataattcagtgcaattataagggtcggtgt 56  Q
    ||||||||||||||||||| ||||||||||||| ||||| ||| ||||||||    
T  21880158 gctaataatttgagaaaattacataattcagtgtaattacaagtgtcggtgt 21880209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 12 - 62
Target Start/End: Complemental strand, 22602756 - 22602706
Alignment:
Q  12 atttgagaaaatcacataattcagtgcaattataagggtcggtgttgtgtc 62  Q
    |||||||||||||||||||||||||| ||||||| | |||||||| |||||    
T  22602756 atttgagaaaatcacataattcagtgtaattatatgtgtcggtgtcgtgtc 22602706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 7 - 64
Target Start/End: Original strand, 5233637 - 5233694
Alignment:
Q  7 taataatttgagaaaatcacataattcagtgcaattataagggtcggtgttgtgtccg 64  Q
    |||||||||||||||||||||||||  |||| ||||||| | || |||||||||||||    
T  5233637 taataatttgagaaaatcacataatctagtgtaattatatgtgttggtgttgtgtccg 5233694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 16341498 - 16341559
Alignment:
Q  1 cactgctaataatttgagaaaatcacataattcagtgcaattataagggtcggtgttgtgtc 62  Q
    ||||| |||||||||||||||||||||||||| |||| ||||||| | | |||||| |||||    
T  16341498 cactgataataatttgagaaaatcacataattaagtgtaattatatgtgccggtgtcgtgtc 16341559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 7 - 76
Target Start/End: Complemental strand, 23128712 - 23128643
Alignment:
Q  7 taataatttgagaaaatcacataattcagtgcaattataagggtcggtgttgtgtccgtgtcggacatga 76  Q
    |||||||||||||||| || ||||||||||| ||| ||| | |||||||||||||  |||||| ||||||    
T  23128712 taataatttgagaaaaccatataattcagtgtaatcatatgtgtcggtgttgtgttggtgtcgaacatga 23128643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 45056958 - 45056925
Alignment:
Q  1 cactgctaataatttgagaaaatcacataattca 34  Q
    ||||||||||||||||||||||||||||||||||    
T  45056958 cactgctaataatttgagaaaatcacataattca 45056925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 3142135 - 3142063
Alignment:
Q  1 cactgctaataatttgagaaaatcacataattcagtgcaattataagggtcggtgttgtgtccgtgtcggaca 73  Q
    |||||||||||| ||||| |||||| |||||||| || ||| ||| | |||||||||||||| ||| ||||||    
T  3142135 cactgctaataaattgagtaaatcatataattcaatgtaatcatatgtgtcggtgttgtgtcggtgccggaca 3142063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 4 - 56
Target Start/End: Original strand, 3721098 - 3721150
Alignment:
Q  4 tgctaataatttgagaaaatcacataattcagtgcaattataagggtcggtgt 56  Q
    ||||||||||||||||||||||||||||| |||  ||||||| | ||||||||    
T  3721098 tgctaataatttgagaaaatcacataatttagtataattatatgtgtcggtgt 3721150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 45
Target Start/End: Original strand, 17851437 - 17851477
Alignment:
Q  5 gctaataatttgagaaaatcacataattcagtgcaattata 45  Q
    ||||||||||| ||||||||||||||||||||| |||||||    
T  17851437 gctaataattttagaaaatcacataattcagtgtaattata 17851477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 7 - 83
Target Start/End: Complemental strand, 26329433 - 26329357
Alignment:
Q  7 taataatttgagaaaatcacataattcagtgcaattataagggtcggtgttgtgtccgtgtcggacatgacaagtgt 83  Q
    |||||||||||||||| |||| ||||||||| ||||||| | ||||| || ||||| ||||| |||| |||| ||||    
T  26329433 taataatttgagaaaaacacacaattcagtgtaattatatgtgtcggcgtcgtgtcggtgtcagacacgacacgtgt 26329357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 57
Target Start/End: Complemental strand, 27093466 - 27093414
Alignment:
Q  5 gctaataatttgagaaaatcacataattcagtgcaattataagggtcggtgtt 57  Q
    ||||||||||| |||||||||||||||| |||| ||||||| | |||||||||    
T  27093466 gctaataatttaagaaaatcacataatttagtgtaattatatgcgtcggtgtt 27093414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 57
Target Start/End: Original strand, 27184835 - 27184887
Alignment:
Q  5 gctaataatttgagaaaatcacataattcagtgcaattataagggtcggtgtt 57  Q
    ||||||||||| |||||||||||||||| |||| ||||||| | |||||||||    
T  27184835 gctaataatttaagaaaatcacataatttagtgtaattatatgcgtcggtgtt 27184887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 6 - 73
Target Start/End: Complemental strand, 6630964 - 6630897
Alignment:
Q  6 ctaataatttgagaaaatcacataattcagtgcaattataagggtcggtgttgtgtccgtgtcggaca 73  Q
    |||||||||||||||| |||| |||||||||| ||||||| | |||| ||| ||||  ||||||||||    
T  6630964 ctaataatttgagaaagtcacttaattcagtgtaattatatgtgtcgatgtcgtgttggtgtcggaca 6630897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 9 - 56
Target Start/End: Original strand, 9482944 - 9482991
Alignment:
Q  9 ataatttgagaaaatcacataattcagtgcaattataagggtcggtgt 56  Q
    ||||||||||||||||||| ||||||||| ||||||| | ||||||||    
T  9482944 ataatttgagaaaatcacacaattcagtgtaattatatgtgtcggtgt 9482991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 9 - 73
Target Start/End: Complemental strand, 11272637 - 11272571
Alignment:
Q  9 ataatttgagaaaatcacata--attcagtgcaattataagggtcggtgttgtgtccgtgtcggaca 73  Q
    ||||||||| |||||||||||  |||||||| ||||| ||| |||||||| ||||| ||||||||||    
T  11272637 ataatttgaaaaaatcacatataattcagtgtaattacaagtgtcggtgtcgtgtcggtgtcggaca 11272571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 5 - 44
Target Start/End: Original strand, 14729707 - 14729746
Alignment:
Q  5 gctaataatttgagaaaatcacataattcagtgcaattat 44  Q
    |||||||||||||||||||||| |||||||||| ||||||    
T  14729707 gctaataatttgagaaaatcacgtaattcagtgtaattat 14729746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 5 - 64
Target Start/End: Complemental strand, 18215239 - 18215180
Alignment:
Q  5 gctaataatttgagaaaatcacataattcagtgcaattataagggtcggtgttgtgtccg 64  Q
    ||||||||||||| ||||||||||||| ||||| | ||| ||| |||||||| |||||||    
T  18215239 gctaataatttgaaaaaatcacataatgcagtgtagttacaagtgtcggtgtcgtgtccg 18215180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 5 - 56
Target Start/End: Original strand, 19206056 - 19206107
Alignment:
Q  5 gctaataatttgagaaaatcacataattcagtgcaattataagggtcggtgt 56  Q
    |||||||||||||||||||||||||||||| |  ||||||| | ||||||||    
T  19206056 gctaataatttgagaaaatcacataattcattataattatatgtgtcggtgt 19206107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 6 - 45
Target Start/End: Original strand, 22868049 - 22868088
Alignment:
Q  6 ctaataatttgagaaaatcacataattcagtgcaattata 45  Q
    |||||||| ||||||||||||||||||||||| |||||||    
T  22868049 ctaataatatgagaaaatcacataattcagtgtaattata 22868088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 5 - 56
Target Start/End: Original strand, 25481908 - 25481959
Alignment:
Q  5 gctaataatttgagaaaatcacataattcagtgcaattataagggtcggtgt 56  Q
    ||||||||||||| ||||||||||||||||||| ||||| ||| || |||||    
T  25481908 gctaataatttgaaaaaatcacataattcagtgtaattacaagtgttggtgt 25481959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 5 - 56
Target Start/End: Original strand, 28155576 - 28155627
Alignment:
Q  5 gctaataatttgagaaaatcacataattcagtgcaattataagggtcggtgt 56  Q
    ||||||||||||||||||| ||||||||| ||| ||||| ||| ||||||||    
T  28155576 gctaataatttgagaaaattacataattcggtgtaattacaagtgtcggtgt 28155627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 4 - 43
Target Start/End: Original strand, 30813817 - 30813856
Alignment:
Q  4 tgctaataatttgagaaaatcacataattcagtgcaatta 43  Q
    |||||||||||||||||||| ||||||||||||| |||||    
T  30813817 tgctaataatttgagaaaattacataattcagtgtaatta 30813856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 56
Target Start/End: Original strand, 3991331 - 3991381
Alignment:
Q  6 ctaataatttgagaaaatcacataattcagtgcaattataagggtcggtgt 56  Q
    |||||||||||| ||||||||||||||||||  ||||| ||| ||||||||    
T  3991331 ctaataatttgaaaaaatcacataattcagtataattacaagtgtcggtgt 3991381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 56
Target Start/End: Original strand, 5835254 - 5835304
Alignment:
Q  6 ctaataatttgagaaaatcacataattcagtgcaattataagggtcggtgt 56  Q
    |||||| ||||||||||| ||||||||||||| ||||||| | ||||||||    
T  5835254 ctaatagtttgagaaaataacataattcagtgtaattatatgtgtcggtgt 5835304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 73
Target Start/End: Complemental strand, 9408385 - 9408319
Alignment:
Q  7 taataatttgagaaaatcacataattcagtgcaattataagggtcggtgttgtgtccgtgtcggaca 73  Q
    ||||||||||| |||||||||||||| |||| ||||| ||| |||||||| || || ||||| ||||    
T  9408385 taataatttgaaaaaatcacataatttagtgtaattacaagtgtcggtgtcgtatcggtgtcagaca 9408319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 43
Target Start/End: Original strand, 23191902 - 23191940
Alignment:
Q  5 gctaataatttgagaaaatcacataattcagtgcaatta 43  Q
    ||||||||||||||||||||||||| ||||||| |||||    
T  23191902 gctaataatttgagaaaatcacatatttcagtgtaatta 23191940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 8 - 42
Target Start/End: Original strand, 30731046 - 30731080
Alignment:
Q  8 aataatttgagaaaatcacataattcagtgcaatt 42  Q
    |||||||||||||||||||||||||||||| ||||    
T  30731046 aataatttgagaaaatcacataattcagtgtaatt 30731080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 130
Target Start/End: Complemental strand, 43027522 - 43027403
Alignment:
Q  5 gctaataatttgagaaaatcacataattcagtgcaattataagggtcggtgttgtgtccgtgtcggacatgacaagtgttcgacattaggacacgcctaa 104  Q
    ||||||||||||| ||||||||||||| ||||| || || ||| ||||||||      |||||| |||| |||| |||| |||||   ||||||||||||    
T  43027522 gctaataatttgaaaaaatcacataatgcagtgtaaatacaagtgtcggtgt------cgtgtcagacacgacacgtgtccgacaccgggacacgcctaa 43027429  T
Q  105 tccgagaagtgtatgagcttcatagc 130  Q
    |||||  |||||  | ||||||||||    
T  43027428 tccgatgagtgtccgtgcttcatagc 43027403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 19 - 116
Target Start/End: Original strand, 2334270 - 2334366
Alignment:
Q  19 aaaatcacataattcagtgcaattataagggtcggtgttgtgtccgtgtcggacatgacaagtgttcgacattaggacacgcctaatccgagaagtgt 116  Q
    |||||||||||||| |||| ||||| ||| |||||||| |||| ||||||||||| ||||  ||| ||||| |   ||||| |||||||||| |||||    
T  2334270 aaaatcacataatttagtgtaattacaagtgtcggtgtcgtgt-cgtgtcggacacgacacatgtccgacactgaaacacgtctaatccgaggagtgt 2334366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 9 - 62
Target Start/End: Original strand, 5548686 - 5548739
Alignment:
Q  9 ataatttgagaaaatcacataattcagtgcaattataagggtcggtgttgtgtc 62  Q
    ||||||||||||||||| ||||||||||| ||||||| | ||| |||| |||||    
T  5548686 ataatttgagaaaatcaaataattcagtgtaattatatgtgtcagtgtcgtgtc 5548739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 9 - 62
Target Start/End: Original strand, 9778510 - 9778563
Alignment:
Q  9 ataatttgagaaaatcacataattcagtgcaattataagggtcggtgttgtgtc 62  Q
    ||||||||| ||||||||||||||||||  ||||| ||| |||||||| |||||    
T  9778510 ataatttgaaaaaatcacataattcagtataattacaagtgtcggtgtcgtgtc 9778563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 7 - 67
Target Start/End: Original strand, 18039006 - 18039067
Alignment:
Q  7 taataatttgagaaaa-tcacataattcagtgcaattataagggtcggtgttgtgtccgtgt 67  Q
    ||||||||||| |||| ||||||||||||||| ||||| ||| |||||||| ||||| ||||    
T  18039006 taataatttgaaaaaaatcacataattcagtgtaattacaagtgtcggtgtcgtgtcggtgt 18039067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 10 - 67
Target Start/End: Complemental strand, 21828453 - 21828396
Alignment:
Q  10 taatttgagaaaatcacataattcagtgcaattataagggtcggtgttgtgtccgtgt 67  Q
    |||||||||||||||||||||| || || |||| || | ||| |||||||||||||||    
T  21828453 taatttgagaaaatcacataatccattgtaattgtatgtgtcagtgttgtgtccgtgt 21828396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 64 - 129
Target Start/End: Original strand, 21880206 - 21880271
Alignment:
Q  64 gtgtcggacatgacaagtgttcgacattaggacacgcctaatccgagaagtgtatgagcttcatag 129  Q
    |||||||||| ||||  ||| |||||  |||||||||||||||||||||||||  | |||||||||    
T  21880206 gtgtcggacacgacacatgtccgacaccaggacacgcctaatccgagaagtgtccgtgcttcatag 21880271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 7 - 52
Target Start/End: Original strand, 43250001 - 43250046
Alignment:
Q  7 taataatttgagaaaatcacataattcagtgcaattataagggtcg 52  Q
    ||||||||||||||||| ||||||| ||||| ||||||||| ||||    
T  43250001 taataatttgagaaaatgacataatacagtgtaattataagtgtcg 43250046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 58 - 130
Target Start/End: Original strand, 598256 - 598328
Alignment:
Q  58 gtgtccgtgtcggacatgacaagtgttcgacattaggacacgcctaatccgagaagtgtatgagcttcatagc 130  Q
    ||||| ||||| |||| |||| |||| |||||   ||||||||||||||||||||||||  | ||||||||||    
T  598256 gtgtcggtgtcagacacgacacgtgtccgacaccgggacacgcctaatccgagaagtgtccgtgcttcatagc 598328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 7 - 55
Target Start/End: Complemental strand, 2425784 - 2425736
Alignment:
Q  7 taataatttgagaaaatcacataattcagtgcaattataagggtcggtg 55  Q
    |||||||||||||||||||||||||| |||| || |||| | |||||||    
T  2425784 taataatttgagaaaatcacataattaagtggaactatatgtgtcggtg 2425736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 12278837 - 12278881
Alignment:
Q  1 cactgctaataatttgagaaaatcacataattcagtgcaattata 45  Q
    ||||| ||||||||| ||||||| ||||||||||||| |||||||    
T  12278837 cactgataataatttaagaaaatgacataattcagtgtaattata 12278881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 10 - 62
Target Start/End: Original strand, 17307904 - 17307956
Alignment:
Q  10 taatttgagaaaatcacataattcagtgcaattataagggtcggtgttgtgtc 62  Q
    |||||||||||||| ||||||||||||| ||||||| | || ||||| |||||    
T  17307904 taatttgagaaaataacataattcagtgtaattatatgtgttggtgtcgtgtc 17307956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 56
Target Start/End: Original strand, 24146821 - 24146873
Alignment:
Q  4 tgctaataatttgagaaaatcacataattcagtgcaattataagggtcggtgt 56  Q
    |||||||||||| |||||||||||||||||| |  ||||||| | ||||||||    
T  24146821 tgctaataattttagaaaatcacataattcaatataattatatgtgtcggtgt 24146873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 5 - 129
Target Start/End: Original strand, 241600 - 241724
Alignment:
Q  5 gctaataatttgagaaaatcacataattcagtgcaattataagggtcggtgttgtgtccgtgtcggacatgacaagtgttcgacattaggacacgcctaa 104  Q
    ||||||||||||  |||||||||||||| |||| |||||| || |||||||| ||||  |||||||||| |||| |||| |||||   ||||||||||||    
T  241600 gctaataatttggaaaaatcacataatttagtgtaattatgagtgtcggtgtcgtgttggtgtcggacacgacacgtgtccgacaccgggacacgcctaa 241699  T
Q  105 tccgagaagtgtatgagcttcatag 129  Q
    ||||||||||||  | |||||||||    
T  241700 tccgagaagtgtccgtgcttcatag 241724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 53; Significance: 2e-21; HSPs: 47)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 6 - 130
Target Start/End: Complemental strand, 15816181 - 15816057
Alignment:
Q  6 ctaataatttgagaaaatcacataattcagtgcaattataagggtcggtgttgtgtccgtgtcggacatgacaagtgttcgacattaggacacgcctaat 105  Q
    |||||||||||| |||||||||||||| |||| ||||||||| |||||||| ||||  |||||||||| |||| |  | |||||   |||||||||||||    
T  15816181 ctaataatttgaaaaaatcacataatttagtgtaattataagtgtcggtgtcgtgttggtgtcggacacgacacgaatccgacaccgggacacgcctaat 15816082  T
Q  106 ccgagaagtgtatgagcttcatagc 130  Q
    |||||||||||  | ||||||||||    
T  15816081 ccgagaagtgtccgtgcttcatagc 15816057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 5 - 130
Target Start/End: Original strand, 22651982 - 22652107
Alignment:
Q  5 gctaataatttgagaaaatcacataattcagtgcaattataagggtcggtgttgtgtccgtgtcggacatgacaagtgttcgacattaggacacgcctaa 104  Q
    ||||||||||||| |||||||||||||||| |  ||||| ||| |||||||| ||||| |||||||||| |||| |||| |||||   ||||||| ||||    
T  22651982 gctaataatttgaaaaaatcacataattcaatataattacaagtgtcggtgtcgtgtcggtgtcggacacgacatgtgtccgacaccgggacacgtctaa 22652081  T
Q  105 tccgagaagtgtatgagcttcatagc 130  Q
    |||||| |||||  | ||||||||||    
T  22652082 tccgaggagtgtccgtgcttcatagc 22652107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 6 - 116
Target Start/End: Complemental strand, 29447162 - 29447052
Alignment:
Q  6 ctaataatttgagaaaatcacataattcagtgcaattataagggtcggtgttgtgtccgtgtcggacatgacaagtgttcgacattaggacacgcctaat 105  Q
    ||||||||||||||||||||||||||||| || || || ||| ||||||||  |||| |||||||||| |||| ||||  ||||  ||||||||||||||    
T  29447162 ctaataatttgagaaaatcacataattcaatgtaactacaagtgtcggtgtcatgtcggtgtcggacacgacatgtgtctgacaccaggacacgcctaat 29447063  T
Q  106 ccgagaagtgt 116  Q
    || || |||||    
T  29447062 cctaggagtgt 29447052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 5 - 129
Target Start/End: Complemental strand, 29510357 - 29510233
Alignment:
Q  5 gctaataatttgagaaaatcacataattcagtgcaattataagggtcggtgttgtgtccgtgtcggacatgacaagtgttcgacattaggacacgcctaa 104  Q
    ||||||||||||| ||||||||| ||||||||  ||||| ||| |||||||| ||||| |||||||||| |||  |||| |||||   |||||| |||||    
T  29510357 gctaataatttgaaaaaatcacaaaattcagtataattacaagtgtcggtgtagtgtcggtgtcggacacgacgcgtgtccgacaccgggacacacctaa 29510258  T
Q  105 tccgagaagtgtatgagcttcatag 129  Q
    |||||| |||||  | |||||||||    
T  29510257 tccgaggagtgtccgtgcttcatag 29510233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 6 - 83
Target Start/End: Complemental strand, 2572108 - 2572031
Alignment:
Q  6 ctaataatttgagaaaatcacataattcagtgcaattataagggtcggtgttgtgtccgtgtcggacatgacaagtgt 83  Q
    |||||||||||| |||||||||||||| |||| ||||| ||| |||||||| ||||| |||||||||| |||| ||||    
T  2572108 ctaataatttgaaaaaatcacataatttagtgtaattacaagtgtcggtgtcgtgtctgtgtcggacacgacacgtgt 2572031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 5 - 129
Target Start/End: Original strand, 8343322 - 8343446
Alignment:
Q  5 gctaataatttgagaaaatcacataattcagtgcaattataagggtcggtgttgtgtccgtgtcggacatgacaagtgttcgacattaggacacgcctaa 104  Q
    ||||||||||||| |||||||||||||| |||| ||||| ||| ||| |||| ||   |||||| |||| |||| |||| |||||   ||||||||||||    
T  8343322 gctaataatttgaaaaaatcacataatttagtgtaattacaagtgtcagtgtcgtacacgtgtccgacacgacacgtgtccgacaccgggacacgcctaa 8343421  T
Q  105 tccgagaagtgtatgagcttcatag 129  Q
    |||||  ||||| || |||||||||    
T  8343422 tccgaagagtgtctgtgcttcatag 8343446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 13844653 - 13844598
Alignment:
Q  1 cactgctaataatttgagaaaatcacataattcagtgcaattataagggtcggtgt 56  Q
    |||||||||||||||||||||||||||||||| |||| ||||||| | ||||||||    
T  13844653 cactgctaataatttgagaaaatcacataattgagtgtaattatatgtgtcggtgt 13844598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 40332193 - 40332248
Alignment:
Q  1 cactgctaataatttgagaaaatcacataattcagtgcaattataagggtcggtgt 56  Q
    |||||| |||||||||||||||||||||||||||||| ||||| ||| ||||||||    
T  40332193 cactgcaaataatttgagaaaatcacataattcagtgtaattacaagtgtcggtgt 40332248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 6 - 56
Target Start/End: Complemental strand, 20679447 - 20679397
Alignment:
Q  6 ctaataatttgagaaaatcacataattcagtgcaattataagggtcggtgt 56  Q
    |||||||||||||||||||||||| ||||||| ||||||||| ||||||||    
T  20679447 ctaataatttgagaaaatcacatagttcagtgtaattataagtgtcggtgt 20679397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 31236634 - 31236580
Alignment:
Q  1 cactgctaataatttgagaaaatcacataattcagtgcaattataagggtcggtg 55  Q
    |||||||||||||||||||||||||||||||||| || ||||||| | |||||||    
T  31236634 cactgctaataatttgagaaaatcacataattcaatgtaattatatgtgtcggtg 31236580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 4 - 45
Target Start/End: Original strand, 3025556 - 3025597
Alignment:
Q  4 tgctaataatttgagaaaatcacataattcagtgcaattata 45  Q
    |||||||||||||||||||||||||||||||||| |||||||    
T  3025556 tgctaataatttgagaaaatcacataattcagtgtaattata 3025597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 5 - 78
Target Start/End: Original strand, 4611540 - 4611613
Alignment:
Q  5 gctaataatttgagaaaatcacataattcagtgcaattataagggtcggtgttgtgtccgtgtcggacatgaca 78  Q
    ||||||||||||||||||| ||||||||||||| ||||||| |  |||||| |||||| || ||||||| ||||    
T  4611540 gctaataatttgagaaaataacataattcagtgtaattatatgtctcggtgctgtgtcggtatcggacacgaca 4611613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 11803261 - 11803321
Alignment:
Q  1 cactgctaataatttgagaaaatcacataattcagtgcaattataagggtcggtgttgtgt 61  Q
    ||||| ||||||||| ||||||||||||||||||||| ||||||| | || ||||||||||    
T  11803261 cactgttaataatttaagaaaatcacataattcagtgtaattatatgtgttggtgttgtgt 11803321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 11927143 - 11927083
Alignment:
Q  1 cactgctaataatttgagaaaatcacataattcagtgcaattataagggtcggtgttgtgt 61  Q
    ||||| ||||||||||| ||||||||||||||||||| ||||||| | |||||||| ||||    
T  11927143 cactgttaataatttgataaaatcacataattcagtgtaattatatgtgtcggtgtcgtgt 11927083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 14731714 - 14731758
Alignment:
Q  1 cactgctaataatttgagaaaatcacataattcagtgcaattata 45  Q
    |||||||||||||||||||||||||||||||| |||| |||||||    
T  14731714 cactgctaataatttgagaaaatcacataatttagtgtaattata 14731758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 5 - 61
Target Start/End: Original strand, 25566847 - 25566903
Alignment:
Q  5 gctaataatttgagaaaatcacataattcagtgcaattataagggtcggtgttgtgt 61  Q
    ||||||||||||| ||||||||||||||||||| ||||| ||| |||||||| ||||    
T  25566847 gctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtgtcgtgt 25566903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 5 - 45
Target Start/End: Original strand, 34897091 - 34897131
Alignment:
Q  5 gctaataatttgagaaaatcacataattcagtgcaattata 45  Q
    ||||||||||||||||||||||||||||||||| |||||||    
T  34897091 gctaataatttgagaaaatcacataattcagtgtaattata 34897131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 12606886 - 12606831
Alignment:
Q  1 cactgctaataatttgagaaaatcacataattcagtgcaattataagggtcggtgt 56  Q
    ||||||||||||||||||||||||| |||||||| || ||||||| | ||||||||    
T  12606886 cactgctaataatttgagaaaatcatataattcaatgtaattatatgtgtcggtgt 12606831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 6 - 45
Target Start/End: Original strand, 14134706 - 14134745
Alignment:
Q  6 ctaataatttgagaaaatcacataattcagtgcaattata 45  Q
    |||||||||||||||||||||||||||||||| |||||||    
T  14134706 ctaataatttgagaaaatcacataattcagtgtaattata 14134745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 6 - 56
Target Start/End: Original strand, 4948659 - 4948709
Alignment:
Q  6 ctaataatttgagaaaatcacataattcagtgcaattataagggtcggtgt 56  Q
    |||||||||||| ||||||||||||||||||| ||||| ||| ||||||||    
T  4948659 ctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtgt 4948709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 7 - 56
Target Start/End: Complemental strand, 4786389 - 4786340
Alignment:
Q  7 taataatttgagaaaatcacataattcagtgcaattataagggtcggtgt 56  Q
    ||||||||| ||||||||||||||||||||| ||||||| | ||||||||    
T  4786389 taataatttaagaaaatcacataattcagtgtaattatatgtgtcggtgt 4786340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 12570565 - 12570461
Alignment:
Q  1 cactgctaataatttgagaaaatcacataattcagtgcaattataagggtcggtgttgtgtccgtgtcggacatgacaagtgttcgacattaggacacgc 100  Q
    ||||||||||||||| |||||| ||||||||| |||| ||||||| | |||| || ||| || ||||| ||||  ||| |||| |||||  |||||||||    
T  12570565 cactgctaataatttaagaaaaacacataattaagtgtaattatatgtgtcgatg-tgtatcggtgtcagacactacacgtgtccgacaccaggacacgc 12570467  T
Q  101 ctaatc 106  Q
    ||||||    
T  12570466 ctaatc 12570461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 29776038 - 29776108
Alignment:
Q  1 cactgctaataatttgagaaaatcacataattcagtgcaattataagggtcggtgttgtgtccgtgtcggaca 73  Q
    |||||||||||||||||||||||||| |||||||||  |||||||   |||||||||  ||| ||||||||||    
T  29776038 cactgctaataatttgagaaaatcacgtaattcagtataattata--tgtcggtgttaagtcagtgtcggaca 29776108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 5307063 - 5307130
Alignment:
Q  1 cactgctaataatttgagaaaatcacataattcagtgcaattataagggtcggtgttgtgtccgtgtcg 69  Q
    ||||| ||||||||||| ||||| |||||||||| || ||| ||||| |||||||| ||||||||||||    
T  5307063 cactgataataatttga-aaaatgacataattcaatgaaatcataagtgtcggtgtcgtgtccgtgtcg 5307130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 73
Target Start/End: Original strand, 7442851 - 7442919
Alignment:
Q  5 gctaataatttgagaaaatcacataattcagtgcaattataagggtcggtgttgtgtccgtgtcggaca 73  Q
    ||||||||||| | ||||| ||||||||||||| ||||| ||| || |||||||| || ||||||||||    
T  7442851 gctaataatttcataaaattacataattcagtgtaattacaagtgttggtgttgtatcagtgtcggaca 7442919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 6 - 58
Target Start/End: Original strand, 7658470 - 7658522
Alignment:
Q  6 ctaataatttgagaaaatcacataattcagtgcaattataagggtcggtgttg 58  Q
    |||||||||||||||||| ||||||||||||| |||||||   ||||||||||    
T  7658470 ctaataatttgagaaaattacataattcagtgtaattatatttgtcggtgttg 7658522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 11944667 - 11944727
Alignment:
Q  1 cactgctaataatttgagaaaatcacataattcagtgcaattataagggtcggtgttgtgt 61  Q
    ||||| ||||||||||| |||||||||||| |||||| ||||||| | |||||||| ||||    
T  11944667 cactgttaataatttgataaaatcacataactcagtgtaattatatgtgtcggtgtcgtgt 11944727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 37
Target Start/End: Complemental strand, 18067987 - 18067955
Alignment:
Q  5 gctaataatttgagaaaatcacataattcagtg 37  Q
    |||||||||||||||||||||||||||||||||    
T  18067987 gctaataatttgagaaaatcacataattcagtg 18067955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 45
Target Start/End: Complemental strand, 24362255 - 24362215
Alignment:
Q  5 gctaataatttgagaaaatcacataattcagtgcaattata 45  Q
    ||||||||||||||| ||||||||||||||||| |||||||    
T  24362255 gctaataatttgagagaatcacataattcagtgtaattata 24362215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 27213549 - 27213593
Alignment:
Q  1 cactgctaataatttgagaaaatcacataattcagtgcaattata 45  Q
    ||||||||||||||| |||||||||||||||||| || |||||||    
T  27213549 cactgctaataatttcagaaaatcacataattcactgtaattata 27213593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 45
Target Start/End: Complemental strand, 39954332 - 39954292
Alignment:
Q  5 gctaataatttgagaaaatcacataattcagtgcaattata 45  Q
    |||||||||||||||||||||||||||| |||| |||||||    
T  39954332 gctaataatttgagaaaatcacataatttagtgtaattata 39954292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 926845 - 926790
Alignment:
Q  1 cactgctaataatttgagaaaatcacataattcagtgcaattataagggtcggtgt 56  Q
    |||| ||||||||||||||||||| |||  ||||||| ||||||||| ||||||||    
T  926845 cactcctaataatttgagaaaatctcattgttcagtgtaattataagtgtcggtgt 926790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 5 - 56
Target Start/End: Original strand, 8342978 - 8343029
Alignment:
Q  5 gctaataatttgagaaaatcacataattcagtgcaattataagggtcggtgt 56  Q
    ||||||||||||| |||||||||||||| |||| ||||| ||| ||||||||    
T  8342978 gctaataatttgaaaaaatcacataatttagtgtaattacaagtgtcggtgt 8343029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 6 - 45
Target Start/End: Original strand, 13203648 - 13203687
Alignment:
Q  6 ctaataatttgagaaaatcacataattcagtgcaattata 45  Q
    |||||||||||||||||| ||||||||||||| |||||||    
T  13203648 ctaataatttgagaaaattacataattcagtgtaattata 13203687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 5 - 44
Target Start/End: Complemental strand, 37283863 - 37283824
Alignment:
Q  5 gctaataatttgagaaaatcacataattcagtgcaattat 44  Q
    ||||||||| ||||||||||||||||||||||| ||||||    
T  37283863 gctaataatctgagaaaatcacataattcagtgtaattat 37283824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 83
Target Start/End: Original strand, 21465418 - 21465496
Alignment:
Q  5 gctaataatttgagaaaatcacataattcagtgcaattataagggtcggtgttgtgtccgtgtcggacatgacaagtgt 83  Q
    ||||||||||||| ||||||| |||||||  || ||||| ||| || ||||| ||||| |||||||||| |||| ||||    
T  21465418 gctaataatttgaaaaaatcatataattcgatgtaattacaagtgttggtgtcgtgtcagtgtcggacacgacacgtgt 21465496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 17 - 83
Target Start/End: Complemental strand, 26902216 - 26902150
Alignment:
Q  17 agaaaatcacataattcagtgcaattataagggtcggtgttgtgtccgtgtcggacatgacaagtgt 83  Q
    ||||||||||||||||||||| ||||||| | |||||||| || |  |||||||||| |||| ||||    
T  26902216 agaaaatcacataattcagtgtaattatatgtgtcggtgtcgtatgagtgtcggacacgacacgtgt 26902150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 64 - 130
Target Start/End: Complemental strand, 36450759 - 36450693
Alignment:
Q  64 gtgtcggacatgacaagtgttcgacattaggacacgcctaatccgagaagtgtatgagcttcatagc 130  Q
    |||||||||| |||  |||| |||||  ||||||||||||||||||| ||||| || ||||||||||    
T  36450759 gtgtcggacacgacgcgtgtccgacaccaggacacgcctaatccgaggagtgtctgtgcttcatagc 36450693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 7 - 56
Target Start/End: Original strand, 20873077 - 20873126
Alignment:
Q  7 taataatttgagaaaatcacataattcagtgcaattataagggtcggtgt 56  Q
    ||||||||||| |||||||||||||| |||| ||||| ||| ||||||||    
T  20873077 taataatttgaaaaaatcacataatttagtgtaattacaagtgtcggtgt 20873126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 5 - 89
Target Start/End: Complemental strand, 22197795 - 22197711
Alignment:
Q  5 gctaataatttgagaaaatcacataattcagtgcaattataagggtcggtgt-tgtgtccgtgtcggacatgacaagtgttcgaca 89  Q
    ||||||||||||| ||| |||||||||| |||| ||||| ||| ||| ||||  |||| |||||||||||||||| |||| |||||    
T  22197795 gctaataatttgaaaaattcacataatttagtgtaattacaagtgtcagtgtcagtgt-cgtgtcggacatgacacgtgtccgaca 22197711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 7 - 56
Target Start/End: Original strand, 24669441 - 24669490
Alignment:
Q  7 taataatttgagaaaatcacataattcagtgcaattataagggtcggtgt 56  Q
    |||||||||||| |||| ||||||||||||| ||||| ||| ||||||||    
T  24669441 taataatttgaggaaattacataattcagtgtaattacaagtgtcggtgt 24669490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 28745500 - 28745577
Alignment:
Q  1 cactgctaataatttgagaaaatcacataattcagtgcaattataagggtcggtgttgtgtccgtgtcggacatgaca 78  Q
    ||||||||||||||||| ||| |||||||||||| || || || ||  |||| ||| ||||| |||||||||| ||||    
T  28745500 cactgctaataatttgaaaaattcacataattcaatgtaactacaaatgtcgatgtcgtgtcggtgtcggacacgaca 28745577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 7 - 56
Target Start/End: Complemental strand, 33405435 - 33405386
Alignment:
Q  7 taataatttgagaaaatcacataattcagtgcaattataagggtcggtgt 56  Q
    |||||||||||||||| ||||||||| |||| ||||||| | ||||||||    
T  33405435 taataatttgagaaaaacacataatttagtgtaattatatgtgtcggtgt 33405386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 7 - 52
Target Start/End: Original strand, 44067524 - 44067569
Alignment:
Q  7 taataatttgagaaaatcacataattcagtgcaattataagggtcg 52  Q
    ||||||||||||||||| ||||||| ||||| ||||||||| ||||    
T  44067524 taataatttgagaaaatgacataatacagtgtaattataagtgtcg 44067569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 69
Target Start/End: Complemental strand, 13437017 - 13436953
Alignment:
Q  5 gctaataatttgagaaaatcacataattcagtgcaattataagggtcggtgttgtgtccgtgtcg 69  Q
    ||||||||||||| ||||||||||||||||  | ||| | ||| |||||||| ||||| ||||||    
T  13437017 gctaataatttgaaaaaatcacataattcatggtaataacaagtgtcggtgtcgtgtcggtgtcg 13436953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 25172755 - 25172683
Alignment:
Q  1 cactgctaataatttgagaaaatcacataattcagtgcaattataagggtcggtgttgtgtccgtgtcggaca 73  Q
    ||||||||||||||||| ||||| ||||| || | || ||||||| | |||||||| |||||  |||||||||    
T  25172755 cactgctaataatttgataaaattacatattttaatgtaattatatgtgtcggtgtcgtgtcaatgtcggaca 25172683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 6 - 58
Target Start/End: Original strand, 26434187 - 26434239
Alignment:
Q  6 ctaataatttgagaaaatcacataattcagtgcaattataagggtcggtgttg 58  Q
    |||||| |||||||||||||||||||||| |  ||||| ||| ||||||||||    
T  26434187 ctaatagtttgagaaaatcacataattcaatataattaaaagtgtcggtgttg 26434239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 53; Significance: 2e-21; HSPs: 68)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 5 - 109
Target Start/End: Original strand, 16766703 - 16766807
Alignment:
Q  5 gctaataatttgagaaaatcacataattcagtgcaattataagggtcggtgttgtgtccgtgtcggacatgacaagtgttcgacattaggacacgcctaa 104  Q
    ||||||||||||| ||||||||||||||||||| ||||| ||| |||||||| ||||| ||||||||||  ||| |||| |||||   ||||||||||||    
T  16766703 gctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtgtcgtgtcggtgtcggacacaacacgtgtccgacaccgggacacgcctaa 16766802  T
Q  105 tccga 109  Q
    |||||    
T  16766803 tccga 16766807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 6 - 110
Target Start/End: Complemental strand, 8365571 - 8365467
Alignment:
Q  6 ctaataatttgagaaaatcacataattcagtgcaattataagggtcggtgttgtgtccgtgtcggacatgacaagtgttcgacattaggacacgcctaat 105  Q
    |||||||||||| || |||||||||||| ||| ||||| ||| |||||||| ||||| || ||||||| |||| |||| ||||| | |||||||||||||    
T  8365571 ctaataatttgaaaatatcacataattcggtgtaattacaagtgtcggtgtcgtgtcggtatcggacacgacacgtgtccgacactgggacacgcctaat 8365472  T
Q  106 ccgag 110  Q
    |||||    
T  8365471 ccgag 8365467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 9025551 - 9025488
Alignment:
Q  1 cactgctaataatttgagaaaatcacataattcagtgcaattataagggtcggtgttgtgtccg 64  Q
    ||||||||||||||||||||||||||||||||||||| ||||||| | |||||||| |||||||    
T  9025551 cactgctaataatttgagaaaatcacataattcagtgtaattatatgtgtcggtgtcgtgtccg 9025488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 5 - 68
Target Start/End: Complemental strand, 34073400 - 34073337
Alignment:
Q  5 gctaataatttgagaaaatcacataattcagtgcaattataagggtcggtgttgtgtccgtgtc 68  Q
    |||||||||||||||||||| |||||||||||| ||||||| |||||||||| ||||| |||||    
T  34073400 gctaataatttgagaaaatctcataattcagtgtaattatatgggtcggtgtcgtgtcggtgtc 34073337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 5 - 115
Target Start/End: Complemental strand, 9107423 - 9107313
Alignment:
Q  5 gctaataatttgagaaaatcacataattcagtgcaattataagggtcggtgttgtgtccgtgtcggacatgacaagtgttcgacattaggacacgcctaa 104  Q
    ||||||||||||| ||||||||| ||||||||| ||||| ||| |||||||| ||||| ||||||||||  ||  |||| |||||   |||||| |||||    
T  9107423 gctaataatttgaaaaaatcacaaaattcagtgtaattacaagtgtcggtgtcgtgtcggtgtcggacacaacgtgtgtccgacaccgggacacacctaa 9107324  T
Q  105 tccgagaagtg 115  Q
    |||||| ||||    
T  9107323 tccgaggagtg 9107313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 7086797 - 7086858
Alignment:
Q  1 cactgctaataatttgagaaaatcacataattcagtgcaattataagggtcggtgttgtgtc 62  Q
    |||||||||||||||||||||||||||||||| |||| ||||||| | |||||||| |||||    
T  7086797 cactgctaataatttgagaaaatcacataatttagtgtaattatatgtgtcggtgtagtgtc 7086858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 6 - 71
Target Start/End: Original strand, 9522898 - 9522963
Alignment:
Q  6 ctaataatttgagaaaatcacataattcagtgcaattataagggtcggtgttgtgtccgtgtcgga 71  Q
    |||||||||| | ||||||||||||||||||| ||||| ||| |||||||||||||| ||||||||    
T  9522898 ctaataatttaaaaaaatcacataattcagtgtaattacaagtgtcggtgttgtgtcggtgtcgga 9522963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 7 - 115
Target Start/End: Complemental strand, 5970159 - 5970051
Alignment:
Q  7 taataatttgagaaaatcacataattcagtgcaattataagggtcggtgttgtgtccgtgtcggacatgacaagtgttcgacattaggacacgcctaatc 106  Q
    ||||||||||| ||||||||||||||||||| ||||| ||  || ||||| ||||| |||||||||| ||||  | | ||||||  ||||||||| ||||    
T  5970159 taataatttgaaaaaatcacataattcagtgtaattacaaatgtgggtgtcgtgtcggtgtcggacacgacacatttccgacatcgggacacgcccaatc 5970060  T
Q  107 cgagaagtg 115  Q
    |||| ||||    
T  5970059 cgaggagtg 5970051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 5 - 129
Target Start/End: Original strand, 10294113 - 10294237
Alignment:
Q  5 gctaataatttgagaaaatcacataattcagtgcaattataagggtcggtgttgtgtccgtgtcggacatgacaagtgttcgacattaggacacgcctaa 104  Q
    ||||||||||||||| |||| |||| |||| || ||||||| | |||||||| ||||  |||||||||| |||| |||| ||| | ||||||||  ||||    
T  10294113 gctaataatttgagataatcgcatatttcaatgtaattatatgtgtcggtgtcgtgttggtgtcggacacgacatgtgtccgaaactaggacacagctaa 10294212  T
Q  105 tccgagaagtgtatgagcttcatag 129  Q
    || ||| ||||| || |||||||||    
T  10294213 tctgaggagtgtctgtgcttcatag 10294237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 10 - 129
Target Start/End: Complemental strand, 10339174 - 10339054
Alignment:
Q  10 taatttgagaaaatcacataattcagtg-caattataagggtcggtgttgtgtccgtgtcggacatgacaagtgttcgacattaggacacgcctaatccg 108  Q
    ||||||||||||||||||||||||||||  ||||||| | ||| |||  ||||| |||||||||| ||||  ||| ||||| | |||||||||||||| |    
T  10339174 taatttgagaaaatcacataattcagtgttaattatatgtgtcagtgccgtgtcggtgtcggacacgacacatgtccgacactgggacacgcctaatcgg 10339075  T
Q  109 agaagtgtatgagcttcatag 129  Q
    || |||||  | |||||||||    
T  10339074 aggagtgtccgtgcttcatag 10339054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 26562691 - 26562759
Alignment:
Q  1 cactgctaataatttgagaaaatcacataattcagtgcaattataagggtcggtgttgtgtccgtgtcg 69  Q
    ||||||||| ||||||||||||||||||||||||||| ||||||| | |||| ||| ||||| ||||||    
T  26562691 cactgctaaaaatttgagaaaatcacataattcagtgtaattatatgtgtcgatgtcgtgtcggtgtcg 26562759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 5 - 56
Target Start/End: Complemental strand, 7265646 - 7265595
Alignment:
Q  5 gctaataatttgagaaaatcacataattcagtgcaattataagggtcggtgt 56  Q
    ||||||||||||||||||||||||||||||||| ||||||| | ||||||||    
T  7265646 gctaataatttgagaaaatcacataattcagtgtaattatatgtgtcggtgt 7265595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 7996435 - 7996380
Alignment:
Q  1 cactgctaataatttgagaaaatcacataattcagtgcaattataagggtcggtgt 56  Q
    ||||||||||||||||||||||||| ||||||||||| ||||||| | ||||||||    
T  7996435 cactgctaataatttgagaaaatcatataattcagtgtaattatatgcgtcggtgt 7996380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 8022366 - 8022421
Alignment:
Q  1 cactgctaataatttgagaaaatcacataattcagtgcaattataagggtcggtgt 56  Q
    ||||||||||||||||||||||||| ||||||||||| ||||||| | ||||||||    
T  8022366 cactgctaataatttgagaaaatcatataattcagtgtaattatatgcgtcggtgt 8022421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 5 - 116
Target Start/End: Original strand, 17435205 - 17435316
Alignment:
Q  5 gctaataatttgagaaaatcacataattcagtgcaattataagggtcggtgttgtgtccgtgtcggacatgacaagtgttcgacattaggacacgcctaa 104  Q
    ||||||||||| | ||||| ||||||||||||| ||||| ||| ||  ||||| ||||  ||||||||| |||| |||||||||| | ||||||| ||||    
T  17435205 gctaataattttaaaaaattacataattcagtgtaattacaagtgttagtgttttgtcgatgtcggacacgacacgtgttcgacactgggacacgtctaa 17435304  T
Q  105 tccgagaagtgt 116  Q
    || || ||||||    
T  17435305 tctgaaaagtgt 17435316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 7 - 129
Target Start/End: Complemental strand, 25038122 - 25038000
Alignment:
Q  7 taataatttgagaaaatcacataattcagtgcaattataagggtcggtgttgtgtccgtgtcggacatgacaagtgttcgacattaggacacgcctaatc 106  Q
    ||||||||||||||||| |||||||| |||| ||||| ||  |||||| ||||||  ||||| |||| |||| |||| |||||  || |||||| | | |    
T  25038122 taataatttgagaaaattacataatttagtgtaattacaaatgtcggtattgtgttggtgtccgacacgacacgtgtccgacaccagaacacgcatgacc 25038023  T
Q  107 cgagaagtgtatgagcttcatag 129  Q
     |||||||||||| |||||||||    
T  25038022 tgagaagtgtatgtgcttcatag 25038000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 8 - 116
Target Start/End: Original strand, 9629392 - 9629500
Alignment:
Q  8 aataatttgagaaaatcacataattcagtgcaattataagggtcggtgt-tgtgtccgtgtcggacatgacaagtgttcgacattaggacacgcctaatc 106  Q
    ||||||||||||||||||||||||||| || ||||||| | ||||||||  |||| |||||||||||  ||| |||| ||||| |  |||||| ||||||    
T  9629392 aataatttgagaaaatcacataattcaatgtaattatatgtgtcggtgtcggtgt-cgtgtcggacacaacatgtgtccgacactgagacacgtctaatc 9629490  T
Q  107 cgagaagtgt 116  Q
    |||| |||||    
T  9629491 cgaggagtgt 9629500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 6 - 62
Target Start/End: Complemental strand, 10770726 - 10770670
Alignment:
Q  6 ctaataatttgagaaaatcacataattcagtgcaattataagggtcggtgttgtgtc 62  Q
    |||||||||||| ||||||||||||||||||| ||||| ||| |||||||| |||||    
T  10770726 ctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtgtcgtgtc 10770670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 5 - 45
Target Start/End: Original strand, 19040358 - 19040398
Alignment:
Q  5 gctaataatttgagaaaatcacataattcagtgcaattata 45  Q
    ||||||||||||||||||||||||||||||||| |||||||    
T  19040358 gctaataatttgagaaaatcacataattcagtgtaattata 19040398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 5 - 73
Target Start/End: Complemental strand, 21395360 - 21395293
Alignment:
Q  5 gctaataatttgagaaaatcacataattcagtgcaattataagggtcggtgttgtgtccgtgtcggaca 73  Q
    ||||||||||||||||||| |||||||| |||| ||||| ||| |||||||| ||||| ||||||||||    
T  21395360 gctaataatttgagaaaat-acataatttagtgtaattacaagtgtcggtgtcgtgtcagtgtcggaca 21395293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 7 - 129
Target Start/End: Original strand, 8713987 - 8714110
Alignment:
Q  7 taataatttgagaaaa-tcacataattcagtgcaattataagggtcggtgttgtgtccgtgtcggacatgacaagtgttcgacattaggacacgcctaat 105  Q
    ||||||||||| |||| ||||||||||||||| ||||| ||  || ||||| ||||| |||||||||| ||||  | | ||||||  ||||||||| |||    
T  8713987 taataatttgaaaaaaatcacataattcagtgtaattacaaatgtgggtgtcgtgtcggtgtcggacacgacacatttccgacatcgggacacgcccaat 8714086  T
Q  106 ccgagaagtgtatgagcttcatag 129  Q
    ||||| ||||| |  |||||||||    
T  8714087 ccgaggagtgtctttgcttcatag 8714110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 8805629 - 8805586
Alignment:
Q  1 cactgctaataatttgagaaaatcacataattcagtgcaattat 44  Q
    |||||||||||||||||||||||||||||||| |||| ||||||    
T  8805629 cactgctaataatttgagaaaatcacataatttagtgtaattat 8805586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 5 - 64
Target Start/End: Original strand, 9027184 - 9027243
Alignment:
Q  5 gctaataatttgagaaaatcacataattcagtgcaattataagggtcggtgttgtgtccg 64  Q
    ||||||||||||||| ||||||||||||| ||| ||||||| | |||||||| |||||||    
T  9027184 gctaataatttgagataatcacataattccgtgtaattatatgtgtcggtgtcgtgtccg 9027243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 21924992 - 21924937
Alignment:
Q  1 cactgctaataatttgagaaaatcacataattcagtgcaattataagggtcggtgt 56  Q
    |||||||||||||||||||| |||| ||||||||||| ||||||| | ||||||||    
T  21924992 cactgctaataatttgagaatatcaaataattcagtgtaattatatgtgtcggtgt 21924937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 58 - 129
Target Start/End: Original strand, 28715343 - 28715414
Alignment:
Q  58 gtgtccgtgtcggacatgacaagtgttcgacattaggacacgcctaatccgagaagtgtatgagcttcatag 129  Q
    ||||| |||||||||| |||| ||||||||||   ||||||||||||| ||||||||||| | |||||||||    
T  28715343 gtgtcggtgtcggacacgacacgtgttcgacaccgggacacgcctaattcgagaagtgtacgtgcttcatag 28715414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 5 - 56
Target Start/End: Complemental strand, 32511719 - 32511668
Alignment:
Q  5 gctaataatttgagaaaatcacataattcagtgcaattataagggtcggtgt 56  Q
    ||||||||||| ||||||||||||||||||||| ||||||||| || |||||    
T  32511719 gctaataatttaagaaaatcacataattcagtgtaattataagtgttggtgt 32511668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 6 - 56
Target Start/End: Complemental strand, 853911 - 853861
Alignment:
Q  6 ctaataatttgagaaaatcacataattcagtgcaattataagggtcggtgt 56  Q
    |||||||||||| |||||||||||||| |||||||||| ||| ||||||||    
T  853911 ctaataatttgaaaaaatcacataattaagtgcaattacaagtgtcggtgt 853861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 6 - 52
Target Start/End: Original strand, 2117083 - 2117129
Alignment:
Q  6 ctaataatttgagaaaatcacataattcagtgcaattataagggtcg 52  Q
    |||||||||||| |||||||||||||||| |||||||||||| ||||    
T  2117083 ctaataatttgaaaaaatcacataattcaatgcaattataagtgtcg 2117129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 9195811 - 9195729
Alignment:
Q  1 cactgctaataatttgagaaaatcacataattcagtgcaattataagggtcggtgttgtgtccgtgtcggacatgacaagtgt 83  Q
    |||| |||||||||||||||||| |||||||| |||| ||||||| | |||||||| ||||  ||||| |||| |||| ||||    
T  9195811 cactcctaataatttgagaaaatgacataatttagtgtaattatatgtgtcggtgtcgtgtaggtgtctgacacgacatgtgt 9195729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 7 - 73
Target Start/End: Original strand, 9617442 - 9617508
Alignment:
Q  7 taataatttgagaaaatcacataattcagtgcaattataagggtcggtgttgtgtccgtgtcggaca 73  Q
    |||||||||||||||||||||||||||| || ||||||| | |||||||| ||  | ||||||||||    
T  9617442 taataatttgagaaaatcacataattcaatgtaattatatgtgtcggtgtcgtcgcggtgtcggaca 9617508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 6 - 116
Target Start/End: Original strand, 31384927 - 31385036
Alignment:
Q  6 ctaataatttgagaaaatcacataattcagtgcaattataagggtcggtgttgtgtccgtgtcggacatgacaagtgttcgacattaggacacgcctaat 105  Q
    |||||||||||| ||||||||||||||||||| ||||| ||| ||| |||| ||||  |||| ||||| |||| |||| | |||   |||||||||||||    
T  31384927 ctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcagtgtcgtgt-agtgttggacacgacacgtgtcctacaccgggacacgcctaat 31385025  T
Q  106 ccgagaagtgt 116  Q
    || || |||||    
T  31385026 ccaaggagtgt 31385036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 6 - 56
Target Start/End: Original strand, 34595141 - 34595191
Alignment:
Q  6 ctaataatttgagaaaatcacataattcagtgcaattataagggtcggtgt 56  Q
    |||||||||||| ||||||||||||||||||| ||||| ||| ||||||||    
T  34595141 ctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtgt 34595191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 7 - 112
Target Start/End: Complemental strand, 4118384 - 4118279
Alignment:
Q  7 taataatttgagaaaatcacataattcagtgcaattataagggtcggtgttgtgtccgtgtcggacatgacaagtgttcgacattaggacacgcctaatc 106  Q
    ||||||||||| |||||||||||||| | || ||||| ||| || ||| ||||||| ||||||||||  | | ||||| |||| ||  ||||||||||||    
T  4118384 taataatttgaaaaaatcacataattaaatgtaattacaagtgttggttttgtgtcagtgtcggacacaatacgtgtttgacaataaaacacgcctaatc 4118285  T
Q  107 cgagaa 112  Q
     |||||    
T  4118284 tgagaa 4118279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 13364762 - 13364705
Alignment:
Q  1 cactgctaataatttgagaaaatcacataattcagtgcaattataagggtcggtgttg 58  Q
    ||||||| ||||||||||||||||| ||||||||||| ||| ||| | ||||||||||    
T  13364762 cactgcttataatttgagaaaatcatataattcagtgtaatcatatgtgtcggtgttg 13364705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 7 - 44
Target Start/End: Complemental strand, 31579276 - 31579239
Alignment:
Q  7 taataatttgagaaaatcacataattcagtgcaattat 44  Q
    ||||||||||||||||||||||||||||||| ||||||    
T  31579276 taataatttgagaaaatcacataattcagtgtaattat 31579239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 45
Target Start/End: Original strand, 9658885 - 9658925
Alignment:
Q  5 gctaataatttgagaaaatcacataattcagtgcaattata 45  Q
    ||||||||||| ||||||||||||||||||||| |||||||    
T  9658885 gctaataatttaagaaaatcacataattcagtgtaattata 9658925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 7 - 47
Target Start/End: Complemental strand, 17341715 - 17341675
Alignment:
Q  7 taataatttgagaaaatcacataattcagtgcaattataag 47  Q
    ||||||||||| ||||||||||||||||||| |||||||||    
T  17341715 taataatttgataaaatcacataattcagtgtaattataag 17341675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 45
Target Start/End: Complemental strand, 30866197 - 30866157
Alignment:
Q  5 gctaataatttgagaaaatcacataattcagtgcaattata 45  Q
    |||||||||||||||||||||||||||||| || |||||||    
T  30866197 gctaataatttgagaaaatcacataattcaatgtaattata 30866157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 5 - 56
Target Start/End: Original strand, 7377985 - 7378036
Alignment:
Q  5 gctaataatttgagaaaatcacataattcagtgcaattataagggtcggtgt 56  Q
    ||||| |||||||||||||||||||||||| || ||||||| | ||||||||    
T  7377985 gctaaaaatttgagaaaatcacataattcaatgtaattatatgtgtcggtgt 7378036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 5 - 56
Target Start/End: Original strand, 7938122 - 7938173
Alignment:
Q  5 gctaataatttgagaaaatcacataattcagtgcaattataagggtcggtgt 56  Q
    ||||||||||||| ||||||| |||||| |||| ||||||||| ||||||||    
T  7938122 gctaataatttgaaaaaatcatataatttagtgtaattataagtgtcggtgt 7938173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 5 - 56
Target Start/End: Complemental strand, 7977883 - 7977832
Alignment:
Q  5 gctaataatttgagaaaatcacataattcagtgcaattataagggtcggtgt 56  Q
    ||||||||||||| ||||| ||||||||||||| ||||| ||| ||||||||    
T  7977883 gctaataatttgaaaaaattacataattcagtgtaattacaagtgtcggtgt 7977832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 10 - 45
Target Start/End: Complemental strand, 13360420 - 13360385
Alignment:
Q  10 taatttgagaaaatcacataattcagtgcaattata 45  Q
    |||||||||||||||||||||||||||| |||||||    
T  13360420 taatttgagaaaatcacataattcagtgtaattata 13360385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 6 - 57
Target Start/End: Original strand, 16833315 - 16833366
Alignment:
Q  6 ctaataatttgagaaaatcacataattcagtgcaattataagggtcggtgtt 57  Q
    |||||||||||| ||||||||||| ||||||| ||||| ||| |||||||||    
T  16833315 ctaataatttgaaaaaatcacatacttcagtgtaattacaagtgtcggtgtt 16833366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 5 - 56
Target Start/End: Original strand, 28152105 - 28152155
Alignment:
Q  5 gctaataatttgagaaaatcacataattcagtgcaattataagggtcggtgt 56  Q
    ||||||||||||| ||||||||||||||||||| ||||| ||| ||||||||    
T  28152105 gctaataatttga-aaaatcacataattcagtgtaattacaagtgtcggtgt 28152155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 7 - 58
Target Start/End: Original strand, 32299283 - 32299334
Alignment:
Q  7 taataatttgagaaaatcacataattcagtgcaattataagggtcggtgttg 58  Q
    |||||||||||||||||||||||||||| || | ||||| | ||||||||||    
T  32299283 taataatttgagaaaatcacataattcaatgtagttatacgtgtcggtgttg 32299334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 33001346 - 33001291
Alignment:
Q  1 cactgctaataatttgagaaaatcacataattcagtgcaattataagggtcggtgt 56  Q
    ||||||||||||||||| |||||||||||||| | || ||||||| | ||||||||    
T  33001346 cactgctaataatttgaaaaaatcacataattaaatgtaattatatgtgtcggtgt 33001291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 45
Target Start/End: Original strand, 5462694 - 5462732
Alignment:
Q  7 taataatttgagaaaatcacataattcagtgcaattata 45  Q
    |||||||||||||||||||||||||||| || |||||||    
T  5462694 taataatttgagaaaatcacataattcattgtaattata 5462732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 45
Target Start/End: Complemental strand, 7569219 - 7569181
Alignment:
Q  7 taataatttgagaaaatcacataattcagtgcaattata 45  Q
    ||||||||||||||||| ||||||||||||| |||||||    
T  7569219 taataatttgagaaaattacataattcagtgtaattata 7569181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 35
Target Start/End: Complemental strand, 7723307 - 7723273
Alignment:
Q  1 cactgctaataatttgagaaaatcacataattcag 35  Q
    ||||||||||||||||||||||||| |||||||||    
T  7723307 cactgctaataatttgagaaaatcatataattcag 7723273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 56
Target Start/End: Complemental strand, 7801208 - 7801158
Alignment:
Q  6 ctaataatttgagaaaatcacataattcagtgcaattataagggtcggtgt 56  Q
    |||||||||||| ||||||||||||||||| | ||||| ||| ||||||||    
T  7801208 ctaataatttgaaaaaatcacataattcagcgtaattacaagtgtcggtgt 7801158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 11 - 45
Target Start/End: Complemental strand, 11591917 - 11591883
Alignment:
Q  11 aatttgagaaaatcacataattcagtgcaattata 45  Q
    ||||||||||||||||||||||||||| |||||||    
T  11591917 aatttgagaaaatcacataattcagtgtaattata 11591883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 8 - 46
Target Start/End: Complemental strand, 16388283 - 16388245
Alignment:
Q  8 aataatttgagaaaatcacataattcagtgcaattataa 46  Q
    |||||||||| ||||||||||||||||||| ||||||||    
T  16388283 aataatttgaaaaaatcacataattcagtgtaattataa 16388245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 17 - 83
Target Start/End: Complemental strand, 16488631 - 16488565
Alignment:
Q  17 agaaaatcacataattcagtgcaattataagggtcggtgttgtgtccgtgtcggacatgacaagtgt 83  Q
    ||||||||||| ||| ||||| ||||||| | |||||||| ||||| |||||||||| |||| ||||    
T  16488631 agaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcgtgtcggtgtcggacacgacacgtgt 16488565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 56
Target Start/End: Original strand, 19044471 - 19044521
Alignment:
Q  6 ctaataatttgagaaaatcacataattcagtgcaattataagggtcggtgt 56  Q
    ||||||||||||||| ||||||||||||||||  |||||| | ||||||||    
T  19044471 ctaataatttgagaatatcacataattcagtgttattatatgtgtcggtgt 19044521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 43718 - 43751
Alignment:
Q  1 cactgctaataatttgagaaaatcacataattca 34  Q
    |||||||||||||||||||||||||| |||||||    
T  43718 cactgctaataatttgagaaaatcacgtaattca 43751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #56
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 7 - 56
Target Start/End: Complemental strand, 5732561 - 5732512
Alignment:
Q  7 taataatttgagaaaatcacataattcagtgcaattataagggtcggtgt 56  Q
    ||||||||||||||||||||||| || |||| ||||||| | ||||||||    
T  5732561 taataatttgagaaaatcacatattttagtgtaattatatgtgtcggtgt 5732512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #57
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 5 - 62
Target Start/End: Original strand, 12696330 - 12696387
Alignment:
Q  5 gctaataatttgagaaaatcacataattcagtgcaattataagggtcggtgttgtgtc 62  Q
    ||||||||||||| ||||| ||||||||||||| ||||| ||| ||| |||| |||||    
T  12696330 gctaataatttgaaaaaattacataattcagtgtaattacaagtgtcagtgtcgtgtc 12696387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #58
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 5 - 62
Target Start/End: Complemental strand, 20576686 - 20576629
Alignment:
Q  5 gctaataatttgagaaaatcacataattcagtgcaattataagggtcggtgttgtgtc 62  Q
    |||||||||| ||||||||  |||||||||||| ||||||||| || ||||| |||||    
T  20576686 gctaataattcgagaaaattgcataattcagtgtaattataagtgttggtgtcgtgtc 20576629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #59
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 93 - 130
Target Start/End: Complemental strand, 32839607 - 32839570
Alignment:
Q  93 ggacacgcctaatccgagaagtgtatgagcttcatagc 130  Q
    |||||||||||||||||||||||| || ||||||||||    
T  32839607 ggacacgcctaatccgagaagtgtctgtgcttcatagc 32839570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #60
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 45
Target Start/End: Original strand, 1532246 - 1532286
Alignment:
Q  5 gctaataatttgagaaaatcacataattcagtgcaattata 45  Q
    ||||||||||||| ||||| ||||||||||||| |||||||    
T  1532246 gctaataatttgataaaattacataattcagtgtaattata 1532286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #61
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 49 - 129
Target Start/End: Original strand, 3209438 - 3209518
Alignment:
Q  49 gtcggtgttgtgtccgtgtcggacatgacaagtgttcgacattaggacacgcctaatccgagaagtgtatgagcttcatag 129  Q
    |||||||| ||||| |||||| ||| |||| | || |||||   |||||||||||||||||| ||||| || |||||||||    
T  3209438 gtcggtgtcgtgtcagtgtcgaacacgacacgcgtccgacacccggacacgcctaatccgaggagtgtttgtgcttcatag 3209518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #62
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 61
Target Start/End: Original strand, 3398625 - 3398680
Alignment:
Q  5 gctaataatttgagaaaatcacataattcagtgcaattataagggtcggtgttgtgt 61  Q
    ||||||||||||| ||||||| ||||||||||| |||||||||  ||||||| ||||    
T  3398625 gctaataatttga-aaaatcatataattcagtgtaattataagtatcggtgtcgtgt 3398680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #63
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 8389529 - 8389485
Alignment:
Q  1 cactgctaataatttgagaaaatcacataattcagtgcaattata 45  Q
    |||| |||||||||| ||||||||| ||||||||||| |||||||    
T  8389529 cactactaataatttaagaaaatcatataattcagtgtaattata 8389485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #64
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 12686451 - 12686408
Alignment:
Q  1 cactgctaataatttgagaaaatcacataattcagtgcaattata 45  Q
    ||||||||||||||| |||||||||||| |||||||| |||||||    
T  12686451 cactgctaataatttaagaaaatcacat-attcagtgtaattata 12686408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #65
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 45
Target Start/End: Original strand, 13851742 - 13851782
Alignment:
Q  5 gctaataatttgagaaaatcacataattcagtgcaattata 45  Q
    ||||||||||||||||||| || |||||||||| |||||||    
T  13851742 gctaataatttgagaaaataacgtaattcagtgtaattata 13851782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #66
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 24138428 - 24138488
Alignment:
Q  1 cactgctaataatttgagaaaatcacataattcagtgcaattataagggtcggtgttgtgt 61  Q
    ||||||||||||||||| ||||||| |||||| |||| | ||||| |  ||||||||||||    
T  24138428 cactgctaataatttgaaaaaatcatataattaagtgtatttatatgtatcggtgttgtgt 24138488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #67
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 53
Target Start/End: Original strand, 31959165 - 31959213
Alignment:
Q  5 gctaataatttgagaaaatcacataattcagtgcaattataagggtcgg 53  Q
    ||||||||||||| ||||||||||||| ||||| ||||| ||| |||||    
T  31959165 gctaataatttgaaaaaatcacataatgcagtgtaattacaagtgtcgg 31959213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #68
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 6 - 73
Target Start/End: Complemental strand, 34290129 - 34290064
Alignment:
Q  6 ctaataatttgagaaaatcacataattcagtgcaattataagggtcggtgttgtgtccgtgtcggaca 73  Q
    ||||||||||| || ||||||||||||||||| ||||||  | |||||||| ||||| ||||| ||||    
T  34290129 ctaataatttgcgagaatcacataattcagtgtaattat--gtgtcggtgtcgtgtcagtgtccgaca 34290064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 53; Significance: 2e-21; HSPs: 53)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 5 - 117
Target Start/End: Original strand, 19579707 - 19579819
Alignment:
Q  5 gctaataatttgagaaaatcacataattcagtgcaattataagggtcggtgttgtgtccgtgtcggacatgacaagtgttcgacattaggacacgcctaa 104  Q
    |||||||||||||||||||||||||||| |||||||||| ||| |||||||| ||||| |||||||||| ||||  |||   |||   ||||||||||||    
T  19579707 gctaataatttgagaaaatcacataatttagtgcaattacaagtgtcggtgtcgtgtcagtgtcggacacgacatatgtctaacaccgggacacgcctaa 19579806  T
Q  105 tccgagaagtgta 117  Q
    |||||| ||||||    
T  19579807 tccgaggagtgta 19579819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 5 - 131
Target Start/End: Original strand, 7677711 - 7677837
Alignment:
Q  5 gctaataatttgagaaaatcacataattcagtgcaattataagggtcggtgttgtgtccgtgtcggacatgacaagtgttcgacattaggacacgcctaa 104  Q
    ||||||||||||| ||||||||||||||||||||||||| ||| |||||||| ||||| ||||| |||| | ||  ||| |||||   ||||||||||||    
T  7677711 gctaataatttgaaaaaatcacataattcagtgcaattagaagtgtcggtgtcgtgtcggtgtctgacacgtcacatgtccgacaccgggacacgcctaa 7677810  T
Q  105 tccgagaagtgtatgagcttcatagca 131  Q
    |||||| || ||  | |||||||||||    
T  7677811 tccgaggagagtcggtgcttcatagca 7677837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 5 - 129
Target Start/End: Original strand, 39698547 - 39698671
Alignment:
Q  5 gctaataatttgagaaaatcacataattcagtgcaattataagggtcggtgttgtgtccgtgtcggacatgacaagtgttcgacattaggacacgcctaa 104  Q
    ||||||||||||| ||||||||||||||||||| ||||| ||| ||| |||| ||||| |||||||||| |||| || | |||||    |||||||||||    
T  39698547 gctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcagtgtcgtgtcggtgtcggacacgacatgtatccgacaccgagacacgcctaa 39698646  T
Q  105 tccgagaagtgtatgagcttcatag 129  Q
    |||||| |||||  | |||||||||    
T  39698647 tccgaggagtgtccgtgcttcatag 39698671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 5 - 116
Target Start/End: Original strand, 3966509 - 3966620
Alignment:
Q  5 gctaataatttgagaaaatcacataattcagtgcaattataagggtcggtgttgtgtccgtgtcggacatgacaagtgttcgacattaggacacgcctaa 104  Q
    ||||||||||||||||||||||| ||||||||| ||||||| | |||||||| ||||| ||||||||||  ||| |||| | |||   ||||||| ||||    
T  3966509 gctaataatttgagaaaatcacacaattcagtgtaattatatgtgtcggtgtcgtgtcagtgtcggacacaacatgtgtccaacagagggacacgtctaa 3966608  T
Q  105 tccgagaagtgt 116  Q
    |||||| |||||    
T  3966609 tccgaggagtgt 3966620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 7 - 127
Target Start/End: Complemental strand, 23016040 - 23015926
Alignment:
Q  7 taataatttgagaaaatcacataattcagtgcaattataagggtcggtgttgtgtccgtgtcggacatgacaagtgttcgacattaggacacgcctaatc 106  Q
    |||| |||||||||||||||||||||||||| ||||||| | |||| |||||| ||      ||||| |||| |||| ||||||| ||||||||||||||    
T  23016040 taatcatttgagaaaatcacataattcagtgtaattataggtgtcgatgttgtatc------ggacacgacatgtgtccgacattgggacacgcctaatc 23015947  T
Q  107 cgagaagtgtatgagcttcat 127  Q
    |||| |||||  |||||||||    
T  23015946 cgaggagtgtccgagcttcat 23015926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 7 - 110
Target Start/End: Original strand, 30098334 - 30098437
Alignment:
Q  7 taataatttgagaaaatcacataattcagtgcaattataagggtcggtgttgtgtccgtgtcggacatgacaagtgttcgacattaggacacgcctaatc 106  Q
    |||||||||||||||||||||||||||| || |||||||   |||||| | | ||| |||||||||| |||| ||||  ||||  ||||||| |||||||    
T  30098334 taataatttgagaaaatcacataattcaatgtaattatagatgtcggtatcgagtcagtgtcggacacgacacgtgtcagacaccaggacacacctaatc 30098433  T
Q  107 cgag 110  Q
    ||||    
T  30098434 cgag 30098437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 41091314 - 41091243
Alignment:
Q  1 cactgctaataatttgagaaaatcacataattcagtgcaattataagggtcggtgttgtgtccgtgtcggac 72  Q
    |||||||||| |||||||||||||||||||||||||| ||||||| | |||| ||| |||||  ||||||||    
T  41091314 cactgctaatgatttgagaaaatcacataattcagtgtaattatatgtgtcgatgtcgtgtcaatgtcggac 41091243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 5 - 107
Target Start/End: Original strand, 21522756 - 21522858
Alignment:
Q  5 gctaataatttgagaaaatcacataattcagtgcaattataagggtcggtgttgtgtccgtgtcggacatgacaagtgttcgacattaggacacgcctaa 104  Q
    ||||||||||| | ||||| ||||||||||||| ||||| ||  |||||||| ||||| |||||||||| |||| |||| || ||   ||||||||||||    
T  21522756 gctaataattttaaaaaataacataattcagtgtaattacaattgtcggtgtcgtgtcggtgtcggacacgacacgtgtccggcaccgggacacgcctaa 21522855  T
Q  105 tcc 107  Q
    |||    
T  21522856 tcc 21522858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 5 - 107
Target Start/End: Original strand, 21533322 - 21533424
Alignment:
Q  5 gctaataatttgagaaaatcacataattcagtgcaattataagggtcggtgttgtgtccgtgtcggacatgacaagtgttcgacattaggacacgcctaa 104  Q
    ||||||||||| | ||||| ||||||||||||| ||||| ||  |||||||| ||||| |||||||||| |||| |||| || ||   ||||||||||||    
T  21533322 gctaataattttaaaaaataacataattcagtgtaattacaattgtcggtgtcgtgtcggtgtcggacacgacacgtgtccggcaccgggacacgcctaa 21533421  T
Q  105 tcc 107  Q
    |||    
T  21533422 tcc 21533424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 6 - 107
Target Start/End: Original strand, 21542037 - 21542138
Alignment:
Q  6 ctaataatttgagaaaatcacataattcagtgcaattataagggtcggtgttgtgtccgtgtcggacatgacaagtgttcgacattaggacacgcctaat 105  Q
    |||||||||| | || || ||||||||||||| ||||| ||| |||||||| ||||| |||||||||| |||| |||| |||||   ||||||||| |||    
T  21542037 ctaataatttaaaaagataacataattcagtgtaattacaagtgtcggtgtcgtgtcggtgtcggacacgacacgtgtccgacaccgggacacgccgaat 21542136  T
Q  106 cc 107  Q
    ||    
T  21542137 cc 21542138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 7 - 56
Target Start/End: Complemental strand, 28588725 - 28588676
Alignment:
Q  7 taataatttgagaaaatcacataattcagtgcaattataagggtcggtgt 56  Q
    ||||||||||||||||||||||||||||||| ||||||| | ||||||||    
T  28588725 taataatttgagaaaatcacataattcagtgtaattataggtgtcggtgt 28588676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 5 - 45
Target Start/End: Complemental strand, 6471942 - 6471902
Alignment:
Q  5 gctaataatttgagaaaatcacataattcagtgcaattata 45  Q
    ||||||||||||||||||||||||||||||||| |||||||    
T  6471942 gctaataatttgagaaaatcacataattcagtgtaattata 6471902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 5 - 116
Target Start/End: Original strand, 31084329 - 31084434
Alignment:
Q  5 gctaataatttgagaaaatcacataattcagtgcaattataagggtcggtgttgtgtccgtgtcggacatgacaagtgttcgacattaggacacgcctaa 104  Q
    ||||||||||||| |||||||||||||||| || ||||| ||| |||| |||      ||||||||||| |||| |||| ||||| | ||||| ||||||    
T  31084329 gctaataatttgaaaaaatcacataattcaatgtaattacaagtgtcgatgt------cgtgtcggacacgacacgtgtccgacactgggacatgcctaa 31084422  T
Q  105 tccgagaagtgt 116  Q
    |||||| |||||    
T  31084423 tccgaggagtgt 31084434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 16203852 - 16203797
Alignment:
Q  1 cactgctaataatttgagaaaatcacataattcagtgcaattataagggtcggtgt 56  Q
    |||||||||||||||||||||||| ||||||| |||| ||||||| | ||||||||    
T  16203852 cactgctaataatttgagaaaatctcataatttagtgtaattatatgtgtcggtgt 16203797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 5 - 56
Target Start/End: Complemental strand, 21191109 - 21191058
Alignment:
Q  5 gctaataatttgagaaaatcacataattcagtgcaattataagggtcggtgt 56  Q
    ||||||||||||| ||||||||||||||||||| ||||| ||| ||||||||    
T  21191109 gctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtgt 21191058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 6 - 125
Target Start/End: Original strand, 30183556 - 30183675
Alignment:
Q  6 ctaataatttgagaaaatcacataattcagtgcaattataagggtcggtgttgtgtccgtgtcggacatgacaagtgttcgacattaggacacgcctaat 105  Q
    |||||||||||| || ||||||| |||| ||  ||||| ||| |||||||| ||||  || || |||| |||| |||| ||||| | |||||||||||||    
T  30183556 ctaataatttgaaaatatcacattattcggtttaattacaagtgtcggtgtcgtgttggtatcagacacgacacgtgtccgacactgggacacgcctaat 30183655  T
Q  106 ccgagaagtgtatgagcttc 125  Q
     |||||||||| || |||||    
T  30183656 tcgagaagtgtctgtgcttc 30183675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 5 - 56
Target Start/End: Complemental strand, 30502441 - 30502390
Alignment:
Q  5 gctaataatttgagaaaatcacataattcagtgcaattataagggtcggtgt 56  Q
    |||||||||||||||||||||| |||||||||| ||||||| | ||||||||    
T  30502441 gctaataatttgagaaaatcacttaattcagtgtaattatatgtgtcggtgt 30502390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 5 - 56
Target Start/End: Complemental strand, 30542784 - 30542733
Alignment:
Q  5 gctaataatttgagaaaatcacataattcagtgcaattataagggtcggtgt 56  Q
    |||||||||||||||||||||| |||||||||| ||||||| | ||||||||    
T  30542784 gctaataatttgagaaaatcacttaattcagtgtaattatatgtgtcggtgt 30542733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 6 - 56
Target Start/End: Original strand, 6247629 - 6247679
Alignment:
Q  6 ctaataatttgagaaaatcacataattcagtgcaattataagggtcggtgt 56  Q
    |||||||||||| ||||||||||||||||||| ||||| ||| ||||||||    
T  6247629 ctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtgt 6247679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 7 - 73
Target Start/End: Complemental strand, 13287450 - 13287385
Alignment:
Q  7 taataatttgagaaaatcacataattcagtgcaattataagggtcggtgttgtgtccgtgtcggaca 73  Q
    ||||||||||| ||||||||||||||||||| || || ||| |||||||| |||||| |||||||||    
T  13287450 taataatttgaaaaaatcacataattcagtgtaactacaagtgtcggtgtcgtgtcc-tgtcggaca 13287385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 43001802 - 43001863
Alignment:
Q  1 cactgctaataatttgagaaaatcacataattcagtgcaattataagggtcggtgttgtgtc 62  Q
    ||||||||||||||||| ||||| ||||||||||||| ||||| ||| || |||| ||||||    
T  43001802 cactgctaataatttgaaaaaattacataattcagtgtaattacaagtgttggtgatgtgtc 43001863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 45
Target Start/End: Complemental strand, 17593775 - 17593735
Alignment:
Q  5 gctaataatttgagaaaatcacataattcagtgcaattata 45  Q
    |||||||||||||||||||||| |||||||||| |||||||    
T  17593775 gctaataatttgagaaaatcacgtaattcagtgtaattata 17593735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 18421898 - 18421854
Alignment:
Q  1 cactgctaataatttgagaaaatcacataattcagtgcaattata 45  Q
    ||||||| ||||||||||||||||||||||| ||||| |||||||    
T  18421898 cactgctgataatttgagaaaatcacataatccagtgtaattata 18421854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 26716146 - 26716178
Alignment:
Q  1 cactgctaataatttgagaaaatcacataattc 33  Q
    |||||||||||||||||||||||||||||||||    
T  26716146 cactgctaataatttgagaaaatcacataattc 26716178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 26985886 - 26985918
Alignment:
Q  1 cactgctaataatttgagaaaatcacataattc 33  Q
    |||||||||||||||||||||||||||||||||    
T  26985886 cactgctaataatttgagaaaatcacataattc 26985918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 61
Target Start/End: Original strand, 36838549 - 36838605
Alignment:
Q  5 gctaataatttgagaaaatcacataattcagtgcaattataagggtcggtgttgtgt 61  Q
    ||||||||||||||||||| |||||||| |||| ||||||| | |||||||| ||||    
T  36838549 gctaataatttgagaaaattacataatttagtgtaattatatgtgtcggtgtcgtgt 36838605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 5 - 52
Target Start/End: Complemental strand, 21576798 - 21576751
Alignment:
Q  5 gctaataatttgagaaaatcacataattcagtgcaattataagggtcg 52  Q
    ||||||||||||| ||||||||||||||||||| ||||| ||| ||||    
T  21576798 gctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcg 21576751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 22423869 - 22423802
Alignment:
Q  1 cactgctaataatttgagaaaatcacataattcagtgcaattataagggtcggtgttgtgtccgtgtc 68  Q
    |||| ||||||||||||||||||||||||||||| |  |||||||   |||||||| ||||| |||||    
T  22423869 cactactaataatttgagaaaatcacataattcaatataattatatatgtcggtgtcgtgtcggtgtc 22423802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 10 - 45
Target Start/End: Complemental strand, 24273078 - 24273043
Alignment:
Q  10 taatttgagaaaatcacataattcagtgcaattata 45  Q
    |||||||||||||||||||||||||||| |||||||    
T  24273078 taatttgagaaaatcacataattcagtgtaattata 24273043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 10 - 45
Target Start/End: Original strand, 24389136 - 24389171
Alignment:
Q  10 taatttgagaaaatcacataattcagtgcaattata 45  Q
    |||||||||||||||||||||||||||| |||||||    
T  24389136 taatttgagaaaatcacataattcagtgtaattata 24389171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 6 - 45
Target Start/End: Original strand, 35017044 - 35017083
Alignment:
Q  6 ctaataatttgagaaaatcacataattcagtgcaattata 45  Q
    ||||||||||||||||||||||||||| |||| |||||||    
T  35017044 ctaataatttgagaaaatcacataatttagtgtaattata 35017083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 39205882 - 39205945
Alignment:
Q  1 cactgctaataatttgagaaaatcacataattcagtgcaattataagggtcggtgttgtgtccg 64  Q
    ||||||||||||||||||||||||| ||||||  ||| ||||||| | || ||||| |||||||    
T  39205882 cactgctaataatttgagaaaatcatataattaggtgtaattatatgtgttggtgtcgtgtccg 39205945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 5 - 56
Target Start/End: Original strand, 42893366 - 42893417
Alignment:
Q  5 gctaataatttgagaaaatcacataattcagtgcaattataagggtcggtgt 56  Q
    ||||||||||||| ||||||||||||| ||||| ||||| ||| ||||||||    
T  42893366 gctaataatttgaaaaaatcacataatccagtgtaattacaagtgtcggtgt 42893417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 45
Target Start/End: Complemental strand, 5468029 - 5467991
Alignment:
Q  7 taataatttgagaaaatcacataattcagtgcaattata 45  Q
    ||||||||||| ||||||||||||||||||| |||||||    
T  5468029 taataatttgataaaatcacataattcagtgtaattata 5467991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 17 - 83
Target Start/End: Original strand, 6401516 - 6401582
Alignment:
Q  17 agaaaatcacataattcagtgcaattataagggtcggtgttgtgtccgtgtcggacatgacaagtgt 83  Q
    ||||||||||| ||| ||||| ||||||| | |||||||| ||||| |||||||||| |||| ||||    
T  6401516 agaaaatcacaaaatacagtgtaattatatgtgtcggtgtcgtgtcagtgtcggacacgacacgtgt 6401582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 83
Target Start/End: Original strand, 11685945 - 11686022
Alignment:
Q  5 gctaataatttgagaaaatcacataattcagtgcaattataagggtcggtgttgtgtccgtgtcggacatgacaagtgt 83  Q
    ||||||||||||||||| || ||||||| |||| ||||||| | |||||||| || || |||||||||| |||| ||||    
T  11685945 gctaataatttgagaaagtcgcataatttagtgtaattatatgtgtcggtgtcgt-tcggtgtcggacacgacacgtgt 11686022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 57
Target Start/End: Complemental strand, 19737533 - 19737483
Alignment:
Q  7 taataatttgagaaaatcacataattcagtgcaattataagggtcggtgtt 57  Q
    ||||||||||||||||| |||||||||| |||||| ||| | |||||||||    
T  19737533 taataatttgagaaaattacataattcaatgcaatcatatgtgtcggtgtt 19737483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 17 - 83
Target Start/End: Original strand, 21814279 - 21814345
Alignment:
Q  17 agaaaatcacataattcagtgcaattataagggtcggtgttgtgtccgtgtcggacatgacaagtgt 83  Q
    ||||||||||| ||| ||||| ||||||| | |||||||| ||||| |||||||||| |||| ||||    
T  21814279 agaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcgtgtcggtgtcggacacgacacgtgt 21814345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 58
Target Start/End: Complemental strand, 23012462 - 23012408
Alignment:
Q  4 tgctaataatttgagaaaatcacataattcagtgcaattataagggtcggtgttg 58  Q
    |||||||||||||||||||||| |||||| | || ||||||| | ||||||||||    
T  23012462 tgctaataatttgagaaaatcatataatttaatgtaattatatgtgtcggtgttg 23012408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 43
Target Start/End: Original strand, 27932241 - 27932279
Alignment:
Q  5 gctaataatttgagaaaatcacataattcagtgcaatta 43  Q
    ||||||||||||||||||| ||||||||||||| |||||    
T  27932241 gctaataatttgagaaaattacataattcagtgtaatta 27932279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 7 - 56
Target Start/End: Original strand, 2548395 - 2548444
Alignment:
Q  7 taataatttgagaaaatcacataattcagtgcaattataagggtcggtgt 56  Q
    |||||||| |||||||| ||||||||||||| ||| ||||| ||||||||    
T  2548395 taataattagagaaaattacataattcagtgtaatcataagtgtcggtgt 2548444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 5 - 58
Target Start/End: Original strand, 17123054 - 17123107
Alignment:
Q  5 gctaataatttgagaaaatcacataattcagtgcaattataagggtcggtgttg 58  Q
    |||||||||||||||||||||||||||  ||| ||||||||   ||||||||||    
T  17123054 gctaataatttgagaaaatcacataatcaagtacaattatatatgtcggtgttg 17123107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 9 - 42
Target Start/End: Original strand, 19438353 - 19438386
Alignment:
Q  9 ataatttgagaaaatcacataattcagtgcaatt 42  Q
    ||||||||||||||||||||||||||||| ||||    
T  19438353 ataatttgagaaaatcacataattcagtgtaatt 19438386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 4 - 45
Target Start/End: Complemental strand, 21194177 - 21194136
Alignment:
Q  4 tgctaataatttgagaaaatcacataattcagtgcaattata 45  Q
    ||||| ||||||||||||||||||| |||||||| |||||||    
T  21194177 tgctagtaatttgagaaaatcacatcattcagtgtaattata 21194136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 7 - 52
Target Start/End: Original strand, 25863212 - 25863257
Alignment:
Q  7 taataatttgagaaaatcacataattcagtgcaattataagggtcg 52  Q
    ||||||||||||||||| | ||||||||||| ||||||||| ||||    
T  25863212 taataatttgagaaaatgatataattcagtgtaattataagtgtcg 25863257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 7 - 52
Target Start/End: Original strand, 31264446 - 31264491
Alignment:
Q  7 taataatttgagaaaatcacataattcagtgcaattataagggtcg 52  Q
    ||||||||||||||||| ||||||||||||| ||| ||||| ||||    
T  31264446 taataatttgagaaaatgacataattcagtgtaatcataagtgtcg 31264491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 6 - 47
Target Start/End: Complemental strand, 38464416 - 38464375
Alignment:
Q  6 ctaataatttgagaaaatcacataattcagtgcaattataag 47  Q
    ||||||||||||||||||||||| ||||| || |||||||||    
T  38464416 ctaataatttgagaaaatcacattattcattgaaattataag 38464375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 45
Target Start/End: Original strand, 12927660 - 12927700
Alignment:
Q  5 gctaataatttgagaaaatcacataattcagtgcaattata 45  Q
    ||||||||||||||||||||| |||||| |||| |||||||    
T  12927660 gctaataatttgagaaaatcatataatttagtgtaattata 12927700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 53
Target Start/End: Original strand, 14674275 - 14674323
Alignment:
Q  5 gctaataatttgagaaaatcacataattcagtgcaattataagggtcgg 53  Q
    ||||||||||||| |||||||||||||| |||| ||||| ||| |||||    
T  14674275 gctaataatttgaaaaaatcacataatttagtgtaattacaagtgtcgg 14674323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 56
Target Start/End: Complemental strand, 19820447 - 19820398
Alignment:
Q  5 gctaataatttgagaaaatcacataattcagtgcaattataagggtcggtgt 56  Q
    |||||||||||||||||||  ||||||| ||| |||||||||| ||||||||    
T  19820447 gctaataatttgagaaaat--cataattaagtacaattataagtgtcggtgt 19820398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 45
Target Start/End: Original strand, 27144469 - 27144509
Alignment:
Q  5 gctaataatttgagaaaatcacataattcagtgcaattata 45  Q
    |||||||||||||| ||||||||||||| |||| |||||||    
T  27144469 gctaataatttgaggaaatcacataatttagtgtaattata 27144509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 129
Target Start/End: Complemental strand, 32766996 - 32766872
Alignment:
Q  5 gctaataatttgagaaaatcacataattcagtgcaattataagggtcggtgttgtgtccgtgtcggacatgacaagtgttcgacattaggacacgcctaa 104  Q
    |||||||||||||||||||| || |||||| || ||||||| | ||  |||| ||||| |||||| | | |||| |||| |||||  |||| ||| ||||    
T  32766996 gctaataatttgagaaaatcgcacaattcaatgtaattatatgtgtttgtgtcgtgtcggtgtcgaaaacgacacgtgtccgacaccaggatacgtctaa 32766897  T
Q  105 tccgagaagtgtatgagcttcatag 129  Q
    || ||| |||||  | |||||||||    
T  32766896 tctgaggagtgtccgtgcttcatag 32766872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 6 - 46
Target Start/End: Original strand, 40131628 - 40131668
Alignment:
Q  6 ctaataatttgagaaaatcacataattcagtgcaattataa 46  Q
    |||||||||||| ||||||||||||||||||  ||||||||    
T  40131628 ctaataatttgaaaaaatcacataattcagtttaattataa 40131668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 53; Significance: 2e-21; HSPs: 60)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 5 - 129
Target Start/End: Complemental strand, 34185176 - 34185052
Alignment:
Q  5 gctaataatttgagaaaatcacataattcagtgcaattataagggtcggtgttgtgtccgtgtcggacatgacaagtgttcgacattaggacacgcctaa 104  Q
    ||||||||||| | ||||||||| ||||||||| ||||| ||| |||||||| |||||| ||||||||| |||| |||| |||||   ||||||||||||    
T  34185176 gctaataatttcaaaaaatcacacaattcagtgtaattacaagtgtcggtgtcgtgtccatgtcggacaagacatgtgtccgacaccgggacacgcctaa 34185077  T
Q  105 tccgagaagtgtatgagcttcatag 129  Q
    |||||| |||||  | |||||||||    
T  34185076 tccgaggagtgtccgtgcttcatag 34185052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 6 - 129
Target Start/End: Complemental strand, 17005671 - 17005548
Alignment:
Q  6 ctaataatttgagaaaatcacataattcagtgcaattataagggtcggtgttgtgtccgtgtcggacatgacaagtgttcgacattaggacacgcctaat 105  Q
    |||||||||||| ||||||| ||||||||||| ||||||||| |||||||||||||  ||||| ||||| ||| ||||  ||||  |||||||  |||||    
T  17005671 ctaataatttgataaaatcatataattcagtgtaattataagtgtcggtgttgtgttggtgtcagacataacacgtgtctgacaccaggacacctctaat 17005572  T
Q  106 ccgagaagtgtatgagcttcatag 129  Q
    ||||| ||||| || |||||||||    
T  17005571 ccgaggagtgtttgtgcttcatag 17005548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 6 - 129
Target Start/End: Complemental strand, 41961702 - 41961579
Alignment:
Q  6 ctaataatttgagaaaatcacataattcagtgcaattataagggtcggtgttgtgtccgtgtcggacatgacaagtgttcgacattaggacacgcctaat 105  Q
    |||||||||||| || ||||||| |||| ||| ||||| ||| |||||||| ||||| || ||||||| |||| |||| ||||| | |||||||||||||    
T  41961702 ctaataatttgaaaatatcacattattcggtgtaattacaagtgtcggtgtcgtgtcggtatcggacacgacacgtgtccgacactgggacacgcctaat 41961603  T
Q  106 ccgagaagtgtatgagcttcatag 129  Q
    |||||||||||  | |||||||||    
T  41961602 ccgagaagtgtccgtgcttcatag 41961579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 5 - 116
Target Start/End: Complemental strand, 4987344 - 4987233
Alignment:
Q  5 gctaataatttgagaaaatcacataattcagtgcaattataagggtcggtgttgtgtccgtgtcggacatgacaagtgttcgacattaggacacgcctaa 104  Q
    ||||||||||||| ||||||||||||||||||| ||||| ||| || ||||  ||||| |||| ||||| |||| |||| |||||   ||||||||||||    
T  4987344 gctaataatttgaaaaaatcacataattcagtgtaattacaagtgttggtgacgtgtcggtgttggacacgacacgtgtccgacaccgggacacgcctaa 4987245  T
Q  105 tccgagaagtgt 116  Q
    |||||| |||||    
T  4987244 tccgaggagtgt 4987233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 6 - 129
Target Start/End: Original strand, 14209120 - 14209243
Alignment:
Q  6 ctaataatttgagaaaatcacataattcagtgcaattataagggtcggtgttgtgtccgtgtcggacatgacaagtgttcgacattaggacacgcctaat 105  Q
    |||||||||| | ||||||||||||||||||| ||||| ||| ||| |||| ||||| |||||||||| |||| |||| ||||||  ||| || ||||||    
T  14209120 ctaataattttaaaaaatcacataattcagtgtaattacaagtgtcagtgtcgtgtcggtgtcggacacgacacgtgtacgacatcgggatacacctaat 14209219  T
Q  106 ccgagaagtgtatgagcttcatag 129  Q
    || ||||||||  | |||||||||    
T  14209220 ccaagaagtgtccgtgcttcatag 14209243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 5 - 109
Target Start/End: Complemental strand, 8039888 - 8039784
Alignment:
Q  5 gctaataatttgagaaaatcacataattcagtgcaattataagggtcggtgttgtgtccgtgtcggacatgacaagtgttcgacattaggacacgcctaa 104  Q
    ||||||||||||||||||| | ||||||||||| ||||||| | |||||||| ||||| ||||||||||||| |  ||| |||||   |||||||| |||    
T  8039888 gctaataatttgagaaaattatataattcagtgtaattatatgtgtcggtgtcgtgtcggtgtcggacatgagacatgtccgacaccgggacacgcttaa 8039789  T
Q  105 tccga 109  Q
    |||||    
T  8039788 tccga 8039784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 6 - 78
Target Start/End: Original strand, 34910324 - 34910396
Alignment:
Q  6 ctaataatttgagaaaatcacataattcagtgcaattataagggtcggtgttgtgtccgtgtcggacatgaca 78  Q
    |||||||||||| ||||||||||||||||||| ||||| ||| |||||||| || || |||||||||||||||    
T  34910324 ctaataatttgaaaaaatcacataattcagtgtaattacaagagtcggtgtcgtatcggtgtcggacatgaca 34910396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 6 - 116
Target Start/End: Original strand, 14216899 - 14217009
Alignment:
Q  6 ctaataatttgagaaaatcacataattcagtgcaattataagggtcggtgttgtgtccgtgtcggacatgacaagtgttcgacattaggacacgcctaat 105  Q
    |||||||||| | || |||| ||||||||||| ||||| ||| ||| |||| ||||  |||||||||| |||| |||| ||||| | |||||| ||||||    
T  14216899 ctaataattttaaaatatcatataattcagtgtaattacaagtgtccgtgtcgtgttagtgtcggacacgacacgtgtacgacactgggacacacctaat 14216998  T
Q  106 ccgagaagtgt 116  Q
    |||||||||||    
T  14216999 ccgagaagtgt 14217009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 6 - 116
Target Start/End: Original strand, 14223028 - 14223138
Alignment:
Q  6 ctaataatttgagaaaatcacataattcagtgcaattataagggtcggtgttgtgtccgtgtcggacatgacaagtgttcgacattaggacacgcctaat 105  Q
    |||||||||| | || |||| ||||||||||| ||||| ||| ||| |||| ||||  |||||||||| |||| |||| ||||| | |||||| ||||||    
T  14223028 ctaataattttaaaatatcatataattcagtgtaattacaagtgtccgtgtcgtgttagtgtcggacacgacacgtgtacgacactgggacacacctaat 14223127  T
Q  106 ccgagaagtgt 116  Q
    |||||||||||    
T  14223128 ccgagaagtgt 14223138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 5 - 56
Target Start/End: Original strand, 8383263 - 8383314
Alignment:
Q  5 gctaataatttgagaaaatcacataattcagtgcaattataagggtcggtgt 56  Q
    ||||||||||||||||||||| ||||||||||| ||||||||| ||||||||    
T  8383263 gctaataatttgagaaaatcatataattcagtgtaattataagtgtcggtgt 8383314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 7 - 78
Target Start/End: Original strand, 16789020 - 16789091
Alignment:
Q  7 taataatttgagaaaatcacataattcagtgcaattataagggtcggtgttgtgtccgtgtcggacatgaca 78  Q
    ||||||||| | ||||||| ||||||||||| ||||||||| || ||||| ||||| |||||||||||||||    
T  16789020 taataatttaaaaaaatcatataattcagtgtaattataagtgttggtgtcgtgtcagtgtcggacatgaca 16789091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 6 - 129
Target Start/End: Original strand, 28812522 - 28812645
Alignment:
Q  6 ctaataatttgagaaaatcacataattcagtgcaattataagggtcggtgttgtgtccgtgtcggacatgacaagtgttcgacattaggacacgcctaat 105  Q
    ||||||||||||  |||||||||||||||||| | ||| ||| |||||||| ||||  ||||| |||| || |  ||| |||||  ||||||||||||||    
T  28812522 ctaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcgtgttggtgtcagacacgatacatgtccgacagcaggacacgcctaat 28812621  T
Q  106 ccgagaagtgtatgagcttcatag 129  Q
    ||||| ||||| || || ||||||    
T  28812622 ccgaggagtgtctgtgcctcatag 28812645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 6 - 68
Target Start/End: Original strand, 24633773 - 24633835
Alignment:
Q  6 ctaataatttgagaaaatcacataattcagtgcaattataagggtcggtgttgtgtccgtgtc 68  Q
    |||||||||||||||||||||||||||| |||||||||| |  ||| |||| |||||||||||    
T  24633773 ctaataatttgagaaaatcacataattcggtgcaattatgattgtcagtgtggtgtccgtgtc 24633835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 5 - 62
Target Start/End: Complemental strand, 25948940 - 25948883
Alignment:
Q  5 gctaataatttgagaaaatcacataattcagtgcaattataagggtcggtgttgtgtc 62  Q
    ||||||||||||| ||||||||||||||||||| ||||||||| || ||||| |||||    
T  25948940 gctaataatttgaaaaaatcacataattcagtgtaattataagtgttggtgtcgtgtc 25948883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 5 - 46
Target Start/End: Complemental strand, 32429433 - 32429392
Alignment:
Q  5 gctaataatttgagaaaatcacataattcagtgcaattataa 46  Q
    ||||||||||| ||||||||||||||||||||||||||||||    
T  32429433 gctaataatttaagaaaatcacataattcagtgcaattataa 32429392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 5 - 129
Target Start/End: Complemental strand, 34307833 - 34307715
Alignment:
Q  5 gctaataatttgagaaaatcacataattcagtgcaattataagggtcggtgttgtgtccgtgtcggacatgacaagtgttcgacattaggacacgcctaa 104  Q
    ||||||||||||||||||||||||| ||||||| ||||||||      |||| ||||| |||||||||| |||| || ||||| | |  |||||||||||    
T  34307833 gctaataatttgagaaaatcacatatttcagtgtaattataa------gtgtcgtgtcggtgtcggacacgacacgtcttcgatactgagacacgcctaa 34307740  T
Q  105 tccgagaagtgtatgagcttcatag 129  Q
    ||| | || | |||| |||||||||    
T  34307739 tccaataaatttatgtgcttcatag 34307715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 9624643 - 9624687
Alignment:
Q  1 cactgctaataatttgagaaaatcacataattcagtgcaattata 45  Q
    |||||||||||||||||||||||||||||||||| || |||||||    
T  9624643 cactgctaataatttgagaaaatcacataattcaatgtaattata 9624687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 4 - 44
Target Start/End: Original strand, 11251983 - 11252023
Alignment:
Q  4 tgctaataatttgagaaaatcacataattcagtgcaattat 44  Q
    |||||||||||||||||||||||||||||||||| ||||||    
T  11251983 tgctaataatttgagaaaatcacataattcagtgtaattat 11252023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 11313857 - 11313813
Alignment:
Q  1 cactgctaataatttgagaaaatcacataattcagtgcaattata 45  Q
    |||||||||||||||||||||||||||||||| |||| |||||||    
T  11313857 cactgctaataatttgagaaaatcacataatttagtgtaattata 11313813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 5 - 105
Target Start/End: Original strand, 14832105 - 14832205
Alignment:
Q  5 gctaataatttgagaaaatcacataattcagtgcaattataagggtcggtgttgtgtccgtgtcggacatgacaagtgttcgacattaggacacgcctaa 104  Q
    ||||||||||||| |||||||||||| ||| || ||||| ||| ||| |||| ||||| || ||||||| |||| |||| |||||   ||||||||||||    
T  14832105 gctaataatttgaaaaaatcacataactcaatgtaattacaagtgtcagtgtcgtgtcggtatcggacacgacacgtgtccgacaccgggacacgcctaa 14832204  T
Q  105 t 105  Q
    |    
T  14832205 t 14832205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 30994939 - 30994875
Alignment:
Q  1 cactgctaataatttgagaaaatcacataattcagtgcaattataagggtcggtgttgtgtccgt 65  Q
    ||||||||||||||| ||||||||||| ||||||||| ||||||| |  || |||||||||||||    
T  30994939 cactgctaataatttaagaaaatcacacaattcagtgtaattatacgtatcagtgttgtgtccgt 30994875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 5 - 56
Target Start/End: Original strand, 7928456 - 7928507
Alignment:
Q  5 gctaataatttgagaaaatcacataattcagtgcaattataagggtcggtgt 56  Q
    ||||||||||||| ||||||||||||||||||| ||||||| | ||||||||    
T  7928456 gctaataatttgaaaaaatcacataattcagtgtaattatatgtgtcggtgt 7928507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 27277895 - 27277852
Alignment:
Q  1 cactgctaataatttgagaaaatcacataattcagtgcaattat 44  Q
    |||||||||||||||||||||||||||||||| |||| ||||||    
T  27277895 cactgctaataatttgagaaaatcacataatttagtgtaattat 27277852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 5 - 56
Target Start/End: Original strand, 28918007 - 28918058
Alignment:
Q  5 gctaataatttgagaaaatcacataattcagtgcaattataagggtcggtgt 56  Q
    ||||||||||||| ||||||||||||||||||| ||||| ||| ||||||||    
T  28918007 gctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtgt 28918058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 5 - 55
Target Start/End: Original strand, 26508116 - 26508166
Alignment:
Q  5 gctaataatttgagaaaatcacataattcagtgcaattataagggtcggtg 55  Q
    ||||||||||||| ||||||||||||||||||| ||||| ||| |||||||    
T  26508116 gctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtg 26508166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 6 - 83
Target Start/End: Complemental strand, 750670 - 750593
Alignment:
Q  6 ctaataatttgagaaaatcacataattcagtgcaattataagggtcggtgttgtgtccgtgtcggacatgacaagtgt 83  Q
    |||||||||||| || ||||||||||||  |||||||| ||| |||||||| ||||| || ||||||| |||| ||||    
T  750670 ctaataatttgaaaatatcacataattcgctgcaattacaagtgtcggtgtcgtgtcggtatcggacacgacacgtgt 750593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 7 - 48
Target Start/End: Complemental strand, 14840342 - 14840301
Alignment:
Q  7 taataatttgagaaaatcacataattcagtgcaattataagg 48  Q
    ||||||||| ||||||||||||||||||||| ||||||||||    
T  14840342 taataatttcagaaaatcacataattcagtgtaattataagg 14840301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 5 - 62
Target Start/End: Complemental strand, 49651839 - 49651782
Alignment:
Q  5 gctaataatttgagaaaatcacataattcagtgcaattataagggtcggtgttgtgtc 62  Q
    ||||||||||||| |||||||||||||||| || ||||| ||| |||||||| |||||    
T  49651839 gctaataatttgaaaaaatcacataattcactgtaattacaagtgtcggtgtcgtgtc 49651782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 73
Target Start/End: Original strand, 1509545 - 1509613
Alignment:
Q  5 gctaataatttgagaaaatcacataattcagtgcaattataagggtcggtgttgtgtccgtgtcggaca 73  Q
    ||||||||||||| |||||||||||||| |||| ||||| ||| |||||||| || || ||||| ||||    
T  1509545 gctaataatttgaaaaaatcacataatttagtgtaattacaagtgtcggtgtcgtttcggtgtccgaca 1509613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 6 - 62
Target Start/End: Original strand, 9800047 - 9800103
Alignment:
Q  6 ctaataatttgagaaaatcacataattcagtgcaattataagggtcggtgttgtgtc 62  Q
    |||||||||||||||||| ||||||||| ||| |||| |||| |||||||| |||||    
T  9800047 ctaataatttgagaaaattacataattccgtgtaattgtaagtgtcggtgtcgtgtc 9800103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 45
Target Start/End: Complemental strand, 10690315 - 10690275
Alignment:
Q  5 gctaataatttgagaaaatcacataattcagtgcaattata 45  Q
    ||||||||| ||||||||||||||||||||||| |||||||    
T  10690315 gctaataatctgagaaaatcacataattcagtgtaattata 10690275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 45
Target Start/End: Complemental strand, 49505207 - 49505167
Alignment:
Q  5 gctaataatttgagaaaatcacataattcagtgcaattata 45  Q
    |||||||||||||||||||||||||||| |||| |||||||    
T  49505207 gctaataatttgagaaaatcacataatttagtgtaattata 49505167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 9 - 56
Target Start/End: Complemental strand, 8789599 - 8789552
Alignment:
Q  9 ataatttgagaaaatcacataattcagtgcaattataagggtcggtgt 56  Q
    ||||||||||||||||||||||||| ||| ||||||| | ||||||||    
T  8789599 ataatttgagaaaatcacataattccgtgtaattatatgtgtcggtgt 8789552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 6 - 45
Target Start/End: Complemental strand, 11493413 - 11493374
Alignment:
Q  6 ctaataatttgagaaaatcacataattcagtgcaattata 45  Q
    |||||||| ||||||||||||||||||||||| |||||||    
T  11493413 ctaataatgtgagaaaatcacataattcagtgtaattata 11493374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 6 - 45
Target Start/End: Original strand, 12704014 - 12704053
Alignment:
Q  6 ctaataatttgagaaaatcacataattcagtgcaattata 45  Q
    ||||||||||||||||| |||||||||||||| |||||||    
T  12704014 ctaataatttgagaaaagcacataattcagtgtaattata 12704053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 7 - 78
Target Start/End: Complemental strand, 16192801 - 16192730
Alignment:
Q  7 taataatttgagaaaatcacataattcagtgcaattataagggtcggtgttgtgtccgtgtcggacatgaca 78  Q
    ||||||||||||||||| ||||||||||||| ||||||| | || | ||| ||||| ||||| |||| ||||    
T  16192801 taataatttgagaaaataacataattcagtgtaattatatgtgttgatgtcgtgtcggtgtcagacacgaca 16192730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 25093504 - 25093559
Alignment:
Q  1 cactgctaataatttgagaaaatcacataattcagtgcaattataagggtcggtgt 56  Q
    ||||| |||| |||||||||||||||| ||||||||| ||||||| | ||||||||    
T  25093504 cactgttaatgatttgagaaaatcacacaattcagtgtaattatatgtgtcggtgt 25093559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 36
Target Start/End: Original strand, 45451555 - 45451590
Alignment:
Q  1 cactgctaataatttgagaaaatcacataattcagt 36  Q
    ||||||||||||||||||||||||||||| ||||||    
T  45451555 cactgctaataatttgagaaaatcacatacttcagt 45451590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 5 - 56
Target Start/End: Complemental strand, 51206406 - 51206355
Alignment:
Q  5 gctaataatttgagaaaatcacataattcagtgcaattataagggtcggtgt 56  Q
    ||||||||||||| ||||||||||||||||||| || || ||| ||||||||    
T  51206406 gctaataatttgaaaaaatcacataattcagtgtaaatacaagtgtcggtgt 51206355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 7 - 70
Target Start/End: Original strand, 55212971 - 55213033
Alignment:
Q  7 taataatttgagaaaatcacataattcagtgcaattataagggtcggtgttgtgtccgtgtcgg 70  Q
    ||||||||| | |||||||||||||| |||||||||| ||| ||||||| |||||| |||||||    
T  55212971 taataattttaaaaaatcacataatttagtgcaattacaagtgtcggtg-tgtgtcggtgtcgg 55213033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 62
Target Start/End: Complemental strand, 5441084 - 5441029
Alignment:
Q  5 gctaataatttgagaaaatcacataattcagtgcaattataagggtcggtgttgtgtc 62  Q
    ||||| |||||||||||||||||||||||| || ||||||  | ||||||||||||||    
T  5441084 gctaaaaatttgagaaaatcacataattcaatggaattat--gtgtcggtgttgtgtc 5441029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 56
Target Start/End: Original strand, 10954959 - 10955009
Alignment:
Q  6 ctaataatttgagaaaatcacataattcagtgcaattataagggtcggtgt 56  Q
    |||||||||||| ||||||||||||||||||| ||| | ||| ||||||||    
T  10954959 ctaataatttgaaaaaatcacataattcagtgtaatcacaagtgtcggtgt 10955009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 106
Target Start/End: Original strand, 14829696 - 14829797
Alignment:
Q  5 gctaataatttgagaaaatcacataattcagtgcaattataagggtcggtgttgtgtccgtgtcggacatgacaagt-gttcgacattaggacacgccta 103  Q
    ||||||||||||| ||||||||||||||||  | ||||| ||| |||||||| ||||| |||| ||||| || | || ||||||||   |||||||||||    
T  14829696 gctaataatttga-aaaatcacataattcatggtaattacaagtgtcggtgtcgtgtcggtgttggacacgagatgtggttcgacaccgggacacgccta 14829794  T
Q  104 atc 106  Q
    |||    
T  14829795 atc 14829797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 73
Target Start/End: Complemental strand, 15796345 - 15796279
Alignment:
Q  7 taataatttgagaaaatcacataattcagtgcaattataagggtcggtgttgtgtccgtgtcggaca 73  Q
    ||||||||||| ||||||| ||||||||||| ||||| ||  |||||||| ||||  ||||||||||    
T  15796345 taataatttgaaaaaatcatataattcagtgtaattacaattgtcggtgtcgtgtaggtgtcggaca 15796279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 8 - 58
Target Start/End: Original strand, 20503474 - 20503524
Alignment:
Q  8 aataatttgagaaaatcacataattcagtgcaattataagggtcggtgttg 58  Q
    |||||||||| ||||| ||||||||||||| ||||| ||| ||||||||||    
T  20503474 aataatttgaaaaaatgacataattcagtgtaattacaagtgtcggtgttg 20503524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 56
Target Start/End: Original strand, 20691322 - 20691376
Alignment:
Q  2 actgctaataatttgagaaaatcacataattcagtgcaattataagggtcggtgt 56  Q
    |||| ||||||||||||||||| ||||||||||||| ||| ||| | ||||||||    
T  20691322 actgataataatttgagaaaatgacataattcagtgtaatcatatgtgtcggtgt 20691376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 45
Target Start/End: Complemental strand, 32804591 - 32804553
Alignment:
Q  7 taataatttgagaaaatcacataattcagtgcaattata 45  Q
    |||||||||||||||||||||||||| |||| |||||||    
T  32804591 taataatttgagaaaatcacataatttagtgtaattata 32804553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 56
Target Start/End: Original strand, 55401082 - 55401132
Alignment:
Q  6 ctaataatttgagaaaatcacataattcagtgcaattataagggtcggtgt 56  Q
    |||||||||||| |||||||||||||| |||| ||||| ||| ||||||||    
T  55401082 ctaataatttgaaaaaatcacataatttagtgtaattacaagtgtcggtgt 55401132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 5 - 42
Target Start/End: Original strand, 14979187 - 14979224
Alignment:
Q  5 gctaataatttgagaaaatcacataattcagtgcaatt 42  Q
    ||||||||||||| ||||||||||||||||||| ||||    
T  14979187 gctaataatttgaaaaaatcacataattcagtgtaatt 14979224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 8 - 45
Target Start/End: Complemental strand, 15812871 - 15812834
Alignment:
Q  8 aataatttgagaaaatcacataattcagtgcaattata 45  Q
    ||||||||||||||||||||||| |||||| |||||||    
T  15812871 aataatttgagaaaatcacataactcagtgtaattata 15812834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 5 - 54
Target Start/End: Complemental strand, 21257039 - 21256990
Alignment:
Q  5 gctaataatttgagaaaatcacataattcagtgcaattataagggtcggt 54  Q
    ||||||||||||| ||||||||||||||||||  ||||| ||| ||||||    
T  21257039 gctaataatttgaaaaaatcacataattcagtataattacaagtgtcggt 21256990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 7 - 52
Target Start/End: Complemental strand, 24205092 - 24205047
Alignment:
Q  7 taataatttgagaaaatcacataattcagtgcaattataagggtcg 52  Q
    ||||||||||||||||| ||||||| ||||| ||||||||| ||||    
T  24205092 taataatttgagaaaatgacataatacagtgtaattataagtgtcg 24205047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 45
Target Start/End: Original strand, 1438810 - 1438850
Alignment:
Q  5 gctaataatttgagaaaatcacataattcagtgcaattata 45  Q
    ||||| ||||||||||||||||||||||||||  |||||||    
T  1438810 gctaacaatttgagaaaatcacataattcagtataattata 1438850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 37
Target Start/End: Complemental strand, 3164078 - 3164046
Alignment:
Q  5 gctaataatttgagaaaatcacataattcagtg 37  Q
    ||||||||||||| |||||||||||||||||||    
T  3164078 gctaataatttgaaaaaatcacataattcagtg 3164046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 53
Target Start/End: Complemental strand, 4991020 - 4990972
Alignment:
Q  5 gctaataatttgagaaaatcacataattcagtgcaattataagggtcgg 53  Q
    ||||||| ||||||||||| ||||||||||||| ||||| ||| |||||    
T  4991020 gctaatagtttgagaaaattacataattcagtgtaattacaagtgtcgg 4990972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 45
Target Start/End: Complemental strand, 5407300 - 5407260
Alignment:
Q  5 gctaataatttgagaaaatcacataattcagtgcaattata 45  Q
    ||||| |||||||||||||||||||||||| || |||||||    
T  5407300 gctaaaaatttgagaaaatcacataattcattgtaattata 5407260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 58 - 110
Target Start/End: Original strand, 10955000 - 10955052
Alignment:
Q  58 gtgtccgtgtcggacatgacaagtgttcgacattaggacacgcctaatccgag 110  Q
    ||||| |||||||||| |||| |||| ||||| | ||||||||||||||||||    
T  10955000 gtgtcggtgtcggacacgacacgtgtccgacactgggacacgcctaatccgag 10955052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 61
Target Start/End: Original strand, 11665950 - 11666006
Alignment:
Q  5 gctaataatttgagaaaatcacataattcagtgcaattataagggtcggtgttgtgt 61  Q
    ||||||||||||| ||||||||| |||| |||| ||||||| | |||||||| ||||    
T  11665950 gctaataatttgataaaatcacacaatttagtgtaattatatgtgtcggtgtcgtgt 11666006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 45
Target Start/End: Complemental strand, 13620817 - 13620777
Alignment:
Q  5 gctaataatttgagaaaatcacataattcagtgcaattata 45  Q
    |||| ||||||||||||||||||| |||||||||| |||||    
T  13620817 gctagtaatttgagaaaatcacatgattcagtgcagttata 13620777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 6 - 58
Target Start/End: Original strand, 29508451 - 29508503
Alignment:
Q  6 ctaataatttgagaaaatcacataattcagtgcaattataagggtcggtgttg 58  Q
    |||||||||||| ||||||| ||||||||||| ||||||| | |||| |||||    
T  29508451 ctaataatttgaaaaaatcatataattcagtgtaattatatgtgtcgatgttg 29508503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 52; Significance: 6e-21; HSPs: 72)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 5 - 127
Target Start/End: Complemental strand, 1486762 - 1486646
Alignment:
Q  5 gctaataatttgagaaaatcacataattcagtgcaattataagggtcggtgttgtgtccgtgtcggacatgacaagtgttcgacattaggacacgcctaa 104  Q
    ||||||||||||| ||||||||||||||||||| ||||||||| ||||||||      ||||||||||| |||| |||| |||||   ||||||||||||    
T  1486762 gctaataatttgaaaaaatcacataattcagtgtaattataagtgtcggtgt------cgtgtcggacacgacacgtgtccgacaccgggacacgcctaa 1486669  T
Q  105 tccgagaagtgtatgagcttcat 127  Q
    |||||| ||||| || |||||||    
T  1486668 tccgaggagtgtctgtgcttcat 1486646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 6 - 129
Target Start/End: Original strand, 9828051 - 9828174
Alignment:
Q  6 ctaataatttgagaaaatcacataattcagtgcaattataagggtcggtgttgtgtccgtgtcggacatgacaagtgttcgacattaggacacgcctaat 105  Q
    |||||||||||| ||||||||||||||||||| |||| || | |||||||| ||||||||||| |||| |||| |||| |||||   ||||||| |||||    
T  9828051 ctaataatttgataaaatcacataattcagtgtaattttatgtgtcggtgtcgtgtccgtgtcagacacgacacgtgtccgacaccgggacacgtctaat 9828150  T
Q  106 ccgagaagtgtatgagcttcatag 129  Q
    ||||| |||||  | |||||||||    
T  9828151 ccgaggagtgtccgtgcttcatag 9828174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 7 - 129
Target Start/End: Original strand, 47989505 - 47989627
Alignment:
Q  7 taataatttgagaaaatcacataattcagtgcaattataagggtcggtgttgtgtccgtgtcggacatgacaagtgttcgacattaggacacgcctaatc 106  Q
    ||||||||| | ||||||||||||||||||| ||||| ||| |||||||| ||||| |||||||||| ||||  |||  |||||  ||||||||||||||    
T  47989505 taataatttaaaaaaatcacataattcagtgtaattacaagtgtcggtgtcgtgtcggtgtcggacacgacacatgtctgacatcgggacacgcctaatc 47989604  T
Q  107 cgagaagtgtatgagcttcatag 129  Q
    |||| |||||  | |||||||||    
T  47989605 cgaggagtgtccgtgcttcatag 47989627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 7 - 116
Target Start/End: Complemental strand, 6612222 - 6612113
Alignment:
Q  7 taataatttgagaaaatcacataattcagtgcaattataagggtcggtgttgtgtccgtgtcggacatgacaagtgttcgacattaggacacgcctaatc 106  Q
    ||||||||||| ||||| ||||||||||||| ||||| ||| |||||||| |||||  ||||||||| || | |||| |||||  |||||||||||||||    
T  6612222 taataatttgaaaaaattacataattcagtgtaattacaagtgtcggtgtcgtgtcgatgtcggacacgatatgtgtccgacaccaggacacgcctaatc 6612123  T
Q  107 cgagaagtgt 116  Q
    | || |||||    
T  6612122 caaggagtgt 6612113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 6 - 131
Target Start/End: Complemental strand, 32461515 - 32461391
Alignment:
Q  6 ctaataatttgagaaaatcacataattcagtgcaattataagggtcggtgttgtgtccgtgtcggacatgacaagtgttcgacattaggacacgcctaat 105  Q
    |||||||||||| |||||||||||||| | || ||||| ||| || ||||| ||||| |||||||||| |||| ||||  |||| | |||||||||||||    
T  32461515 ctaataatttgaaaaaatcacataatttaatgtaattacaagtgttggtgt-gtgtcggtgtcggacacgacacgtgtctgacactgggacacgcctaat 32461417  T
Q  106 ccgagaagtgtatgagcttcatagca 131  Q
    || ||||||||  | |||||||||||    
T  32461416 ccaagaagtgtccgtgcttcatagca 32461391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 9 - 78
Target Start/End: Original strand, 44482240 - 44482309
Alignment:
Q  9 ataatttgagaaaatcacataattcagtgcaattataagggtcggtgttgtgtccgtgtcggacatgaca 78  Q
    ||||||||||||||||||||||||||||| ||||||| | |||||||| ||||| |||||||||| ||||    
T  44482240 ataatttgagaaaatcacataattcagtgtaattatatgtgtcggtgtcgtgtcggtgtcggacacgaca 44482309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 9 - 78
Target Start/End: Original strand, 25361896 - 25361965
Alignment:
Q  9 ataatttgagaaaatcacataattcagtgcaattataagggtcggtgttgtgtccgtgtcggacatgaca 78  Q
    ||||||||||||||||||||||||||||| ||||||| | ||| |||| ||||| |||||||||| ||||    
T  25361896 ataatttgagaaaatcacataattcagtgtaattatatgtgtcagtgtcgtgtcggtgtcggacacgaca 25361965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 6 - 66
Target Start/End: Complemental strand, 24577238 - 24577178
Alignment:
Q  6 ctaataatttgagaaaatcacataattcagtgcaattataagggtcggtgttgtgtccgtg 66  Q
    |||||||||||| ||||||||||||||||||| ||||| ||| |||||||| |||||||||    
T  24577238 ctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtgtcgtgtccgtg 24577178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 40181873 - 40181917
Alignment:
Q  1 cactgctaataatttgagaaaatcacataattcagtgcaattata 45  Q
    ||||||||||||||||||||||||||||||||||||| |||||||    
T  40181873 cactgctaataatttgagaaaatcacataattcagtgtaattata 40181917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 7 - 58
Target Start/End: Complemental strand, 1864931 - 1864880
Alignment:
Q  7 taataatttgagaaaatcacataattcagtgcaattataagggtcggtgttg 58  Q
    ||||||||||||||||||||||||||||||| ||||||| | ||||||||||    
T  1864931 taataatttgagaaaatcacataattcagtgtaattatatgtgtcggtgttg 1864880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 5 - 56
Target Start/End: Original strand, 36878467 - 36878518
Alignment:
Q  5 gctaataatttgagaaaatcacataattcagtgcaattataagggtcggtgt 56  Q
    ||||||||||||||||||||||||||||||||| ||||||| | ||||||||    
T  36878467 gctaataatttgagaaaatcacataattcagtgtaattataggtgtcggtgt 36878518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 5 - 78
Target Start/End: Complemental strand, 9629953 - 9629880
Alignment:
Q  5 gctaataatttgagaaaatcacataattcagtgcaattataagggtcggtgttgtgtccgtgtcggacatgaca 78  Q
    ||||||||||||| ||||||| |||||||||||  |||||||| |||||||| |||||  ||||||||| ||||    
T  9629953 gctaataatttgataaaatcatataattcagtgtgattataagtgtcggtgtcgtgtcgatgtcggacacgaca 9629880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 5 - 73
Target Start/End: Complemental strand, 5376553 - 5376485
Alignment:
Q  5 gctaataatttgagaaaatcacataattcagtgcaattataagggtcggtgttgtgtccgtgtcggaca 73  Q
    ||||||||||| ||||||| ||||||||||||| ||||| ||| |||||||| |||||  |||||||||    
T  5376553 gctaataatttaagaaaataacataattcagtgtaattaaaagtgtcggtgtcgtgtcgatgtcggaca 5376485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 6 - 62
Target Start/End: Complemental strand, 7918263 - 7918207
Alignment:
Q  6 ctaataatttgagaaaatcacataattcagtgcaattataagggtcggtgttgtgtc 62  Q
    |||||||||||||||||||||||||||||||| ||||||| | ||| |||| |||||    
T  7918263 ctaataatttgagaaaatcacataattcagtgtaattatatgtgtcagtgtcgtgtc 7918207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 19324564 - 19324608
Alignment:
Q  1 cactgctaataatttgagaaaatcacataattcagtgcaattata 45  Q
    ||||||| ||||||||||||||||||||||||||||| |||||||    
T  19324564 cactgctgataatttgagaaaatcacataattcagtgtaattata 19324608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 5 - 53
Target Start/End: Original strand, 31015049 - 31015097
Alignment:
Q  5 gctaataatttgagaaaatcacataattcagtgcaattataagggtcgg 53  Q
    ||||||||||||||||||||||||||||||||| ||||| ||| |||||    
T  31015049 gctaataatttgagaaaatcacataattcagtgtaattacaagtgtcgg 31015097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 5 - 73
Target Start/End: Original strand, 36906003 - 36906071
Alignment:
Q  5 gctaataatttgagaaaatcacataattcagtgcaattataagggtcggtgttgtgtccgtgtcggaca 73  Q
    ||||||||| ||||||||||||||||||||| | ||||||| | || || |||||||| ||||||||||    
T  36906003 gctaataatctgagaaaatcacataattcagagtaattatatgtgttggcgttgtgtcagtgtcggaca 36906071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 5 - 129
Target Start/End: Original strand, 5944287 - 5944413
Alignment:
Q  5 gctaataatttgagaaaa--tcacataattcagtgcaattataagggtcggtgttgtgtccgtgtcggacatgacaagtgttcgacattaggacacgcct 102  Q
    ||||||||||||| ||||  ||||||||||||||| ||||||||| |||||||| |||||  || ||||||  |||  ||| |||||   ||| ||||||    
T  5944287 gctaataatttgaaaaaaaatcacataattcagtgtaattataagtgtcggtgtcgtgtcgatgacggacacaacacatgtccgacaccgggatacgcct 5944386  T
Q  103 aatccgagaagtgtatgagcttcatag 129  Q
    |||||||| |||||  | |||||||||    
T  5944387 aatccgaggagtgttcgtgcttcatag 5944413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 6 - 61
Target Start/End: Complemental strand, 10572641 - 10572586
Alignment:
Q  6 ctaataatttgagaaaatcacataattcagtgcaattataagggtcggtgttgtgt 61  Q
    |||||||||||||||||||||||||||| ||| ||||| | | |||||||||||||    
T  10572641 ctaataatttgagaaaatcacataattcggtgtaattaaatgtgtcggtgttgtgt 10572586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 5 - 64
Target Start/End: Complemental strand, 20157403 - 20157344
Alignment:
Q  5 gctaataatttgagaaaatcacataattcagtgcaattataagggtcggtgttgtgtccg 64  Q
    ||||||||| ||||||||||||||||||||||| ||| ||| | |||||||| |||||||    
T  20157403 gctaataatgtgagaaaatcacataattcagtgtaatcatatgtgtcggtgtcgtgtccg 20157344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 25452205 - 25452162
Alignment:
Q  1 cactgctaataatttgagaaaatcacataattcagtgcaattat 44  Q
    |||||||||||||||||||||||| |||||||||||| ||||||    
T  25452205 cactgctaataatttgagaaaatctcataattcagtgtaattat 25452162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 6 - 45
Target Start/End: Original strand, 34298443 - 34298482
Alignment:
Q  6 ctaataatttgagaaaatcacataattcagtgcaattata 45  Q
    |||||||||||||||||||||||||||||||| |||||||    
T  34298443 ctaataatttgagaaaatcacataattcagtgtaattata 34298482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 5 - 43
Target Start/End: Original strand, 23738684 - 23738722
Alignment:
Q  5 gctaataatttgagaaaatcacataattcagtgcaatta 43  Q
    ||||||||||||| |||||||||||||||||||||||||    
T  23738684 gctaataatttgaaaaaatcacataattcagtgcaatta 23738722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 11 - 61
Target Start/End: Original strand, 25272494 - 25272544
Alignment:
Q  11 aatttgagaaaatcacataattcagtgcaattataagggtcggtgttgtgt 61  Q
    |||||||||||||||||||||| |||| ||||||||| |||||||| ||||    
T  25272494 aatttgagaaaatcacataatttagtgtaattataagtgtcggtgtcgtgt 25272544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 19 - 109
Target Start/End: Complemental strand, 30173801 - 30173711
Alignment:
Q  19 aaaatcacataattcagtgcaattataagggtcggtgttgtgtccgtgtcggacatgacaagtgttcgacattaggacacgcctaatccga 109  Q
    ||||| |||||| |||||| ||||| ||| |||||||| |||||||| ||||||| ||||  ||| ||||  |||||||||||||| ||||    
T  30173801 aaaattacataactcagtgtaattacaagtgtcggtgtcgtgtccgtatcggacacgacacatgtccgactctaggacacgcctaacccga 30173711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 5 - 71
Target Start/End: Original strand, 34371720 - 34371785
Alignment:
Q  5 gctaataatttgagaaaatcacataattcagtgcaattataagggtcggtgttgtgtccgtgtcgga 71  Q
    |||||||||| |||||||||||||||||||||| ||||||| | |||||||| ||||  ||||||||    
T  34371720 gctaataatt-gagaaaatcacataattcagtgtaattatatgtgtcggtgtcgtgttggtgtcgga 34371785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 5 - 110
Target Start/End: Original strand, 40917757 - 40917860
Alignment:
Q  5 gctaataatttgagaaaatcacataattcagtgcaattataagggtcggtgttgtgtccgtgtcggacatgacaagtgttcgacattaggacacgcctaa 104  Q
    ||||||||||||| |||||||||  ||| |||| ||||| |||  ||||||| ||||| |||| ||||| |||| |||| |||||   ||||||||||||    
T  40917757 gctaataatttgaaaaaatcaca--attaagtgtaattacaagtctcggtgtcgtgtcggtgttggacacgacacgtgtccgacaccgggacacgcctaa 40917854  T
Q  105 tccgag 110  Q
    ||||||    
T  40917855 tccgag 40917860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 5 - 62
Target Start/End: Original strand, 113305 - 113362
Alignment:
Q  5 gctaataatttgagaaaatcacataattcagtgcaattataagggtcggtgttgtgtc 62  Q
    ||||||||||||| ||||||||||||||||||| ||||| ||| || ||||| |||||    
T  113305 gctaataatttgaaaaaatcacataattcagtgtaattacaagtgtaggtgtcgtgtc 113362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 5 - 62
Target Start/End: Original strand, 6427356 - 6427413
Alignment:
Q  5 gctaataatttgagaaaatcacataattcagtgcaattataagggtcggtgttgtgtc 62  Q
    |||||||||||||||||||||||||||||| || ||||||| | || ||||| |||||    
T  6427356 gctaataatttgagaaaatcacataattcaatgtaattatatgtgttggtgtcgtgtc 6427413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 5 - 42
Target Start/End: Complemental strand, 12443513 - 12443476
Alignment:
Q  5 gctaataatttgagaaaatcacataattcagtgcaatt 42  Q
    ||||||||||||||||||||||||||||||||| ||||    
T  12443513 gctaataatttgagaaaatcacataattcagtgtaatt 12443476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 34712440 - 34712379
Alignment:
Q  1 cactgctaataatttgagaaaatcacataattcagtgcaattataagggtcggtgttgtgtc 62  Q
    ||||||||||||||||||||||| |||||||| |||| ||||||| | ||| |||| |||||    
T  34712440 cactgctaataatttgagaaaataacataatttagtgtaattatatgtgtcagtgtcgtgtc 34712379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 7 - 56
Target Start/End: Complemental strand, 40258984 - 40258935
Alignment:
Q  7 taataatttgagaaaatcacataattcagtgcaattataagggtcggtgt 56  Q
    ||||||||||| ||||||||||||||||||| ||||| ||| ||||||||    
T  40258984 taataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtgt 40258935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 45
Target Start/End: Complemental strand, 398818 - 398778
Alignment:
Q  5 gctaataatttgagaaaatcacataattcagtgcaattata 45  Q
    ||||||||||||| ||||||||||||||||||| |||||||    
T  398818 gctaataatttgaaaaaatcacataattcagtgtaattata 398778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 6 - 62
Target Start/End: Complemental strand, 1705044 - 1704988
Alignment:
Q  6 ctaataatttgagaaaatcacataattcagtgcaattataagggtcggtgttgtgtc 62  Q
    |||||||||||| ||||||||||||||||| | ||||| ||| |||||||| |||||    
T  1705044 ctaataatttgaaaaaatcacataattcagggtaattacaagtgtcggtgtcgtgtc 1704988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 37
Target Start/End: Complemental strand, 2896174 - 2896142
Alignment:
Q  5 gctaataatttgagaaaatcacataattcagtg 37  Q
    |||||||||||||||||||||||||||||||||    
T  2896174 gctaataatttgagaaaatcacataattcagtg 2896142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 6 - 58
Target Start/End: Original strand, 10233260 - 10233312
Alignment:
Q  6 ctaataatttgagaaaatcacataattcagtgcaattataagggtcggtgttg 58  Q
    ||||||| |||||||||||||||||||||||| ||||||| | ||| ||||||    
T  10233260 ctaataaattgagaaaatcacataattcagtgtaattatatgtgtctgtgttg 10233312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 13436460 - 13436504
Alignment:
Q  1 cactgctaataatttgagaaaatcacataattcagtgcaattata 45  Q
    ||||||||||||||| || |||||||||||||||||| |||||||    
T  13436460 cactgctaataatttaaggaaatcacataattcagtgtaattata 13436504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 8 - 56
Target Start/End: Original strand, 18337338 - 18337386
Alignment:
Q  8 aataatttgagaaaatcacataattcagtgcaattataagggtcggtgt 56  Q
    |||||||||| ||||||||||||||||||| ||||| ||| ||||||||    
T  18337338 aataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtgt 18337386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 129
Target Start/End: Complemental strand, 18556509 - 18556385
Alignment:
Q  5 gctaataatttgagaaaatcacataattcagtgcaattataagggtcggtgttgtgtccgtgtcggacatgacaagtgttcgacattaggacacgcctaa 104  Q
    ||||||||||||| || ||||||||||| | || ||||| |||  | ||||| ||| | ||||| |||  |||| || | ||||| | ||||||||||||    
T  18556509 gctaataatttgaaaatatcacataatttaatgtaattacaagtattggtgtcgtgacggtgtcagacccgacacgtatccgacactgggacacgcctaa 18556410  T
Q  105 tccgagaagtgtatgagcttcatag 129  Q
    ||||||||||||  | |||||||||    
T  18556409 tccgagaagtgtccgtgcttcatag 18556385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 19562678 - 19562634
Alignment:
Q  1 cactgctaataatttgagaaaatcacataattcagtgcaattata 45  Q
    |||||||||||||||||||||||| |||| ||||||| |||||||    
T  19562678 cactgctaataatttgagaaaatctcatagttcagtgtaattata 19562634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 73
Target Start/End: Original strand, 21038089 - 21038157
Alignment:
Q  5 gctaataatttgagaaaatcacataattcagtgcaattataagggtcggtgttgtgtccgtgtcggaca 73  Q
    ||||||||||| ||||||| ||||||||||||| ||| ||| | ||| |||| ||||| ||||||||||    
T  21038089 gctaataatttaagaaaattacataattcagtgtaatcatatgcgtcagtgtcgtgtcggtgtcggaca 21038157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 9 - 45
Target Start/End: Complemental strand, 25098604 - 25098568
Alignment:
Q  9 ataatttgagaaaatcacataattcagtgcaattata 45  Q
    ||||||||||||||||||||||||||||| |||||||    
T  25098604 ataatttgagaaaatcacataattcagtgtaattata 25098568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 5 - 56
Target Start/End: Complemental strand, 5898319 - 5898268
Alignment:
Q  5 gctaataatttgagaaaatcacataattcagtgcaattataagggtcggtgt 56  Q
    ||||||||| ||| ||||||||||||||||||| ||||||| | ||||||||    
T  5898319 gctaataatctgaaaaaatcacataattcagtgtaattatatgcgtcggtgt 5898268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 5 - 56
Target Start/End: Original strand, 9709826 - 9709877
Alignment:
Q  5 gctaataatttgagaaaatcacataattcagtgcaattataagggtcggtgt 56  Q
    |||||||||||||||||||||||||||||  || ||||||| | ||||||||    
T  9709826 gctaataatttgagaaaatcacataattcgttgtaattatatgtgtcggtgt 9709877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 6 - 45
Target Start/End: Complemental strand, 14332694 - 14332655
Alignment:
Q  6 ctaataatttgagaaaatcacataattcagtgcaattata 45  Q
    ||||||||||||||||||||||||||| |||| |||||||    
T  14332694 ctaataatttgagaaaatcacataatttagtgtaattata 14332655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 5 - 56
Target Start/End: Complemental strand, 22515940 - 22515889
Alignment:
Q  5 gctaataatttgagaaaatcacataattcagtgcaattataagggtcggtgt 56  Q
    ||||||||||||| |||||||||||||| |||| ||||| ||| ||||||||    
T  22515940 gctaataatttgaaaaaatcacataatttagtgtaattacaagtgtcggtgt 22515889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 5 - 73
Target Start/End: Complemental strand, 31694765 - 31694695
Alignment:
Q  5 gctaataatttgagaaaa--tcacataattcagtgcaattataagggtcggtgttgtgtccgtgtcggaca 73  Q
    ||||||||||||| ||||  ||||||||||||||  ||||| ||| |||||||| ||||| ||||||||||    
T  31694765 gctaataatttgaaaaaaaatcacataattcagtataattacaagtgtcggtgtcgtgtcggtgtcggaca 31694695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 58 - 129
Target Start/End: Original strand, 37598879 - 37598950
Alignment:
Q  58 gtgtccgtgtcggacatgacaagtgttcgacattaggacacgcctaatccgagaagtgtatgagcttcatag 129  Q
    ||||| |||||||||| |||| |||| ||||| | |||||||||||||||||| |||||  | |||||||||    
T  37598879 gtgtcggtgtcggacacgacacgtgtccgacaatgggacacgcctaatccgaggagtgtccgtgcttcatag 37598950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 38076027 - 38075972
Alignment:
Q  1 cactgctaataatttgagaaaatcacataattcagtgcaattataagggtcggtgt 56  Q
    |||||||||||||||||| ||||||||||| |||||| ||| ||| | ||||||||    
T  38076027 cactgctaataatttgagtaaatcacataagtcagtgtaatcatatgtgtcggtgt 38075972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 5 - 56
Target Start/End: Complemental strand, 38078714 - 38078663
Alignment:
Q  5 gctaataatttgagaaaatcacataattcagtgcaattataagggtcggtgt 56  Q
    ||||||||||||| |||||||||||||||| || ||||| ||| ||||||||    
T  38078714 gctaataatttgaaaaaatcacataattcaatgtaattacaagtgtcggtgt 38078663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 5 - 56
Target Start/End: Original strand, 38503326 - 38503377
Alignment:
Q  5 gctaataatttgagaaaatcacataattcagtgcaattataagggtcggtgt 56  Q
    ||||||||||||||||||||| ||| ||||||| ||||||| | ||||||||    
T  38503326 gctaataatttgagaaaatcatatatttcagtgtaattatatgtgtcggtgt 38503377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 5 - 56
Target Start/End: Complemental strand, 41877523 - 41877472
Alignment:
Q  5 gctaataatttgagaaaatcacataattcagtgcaattataagggtcggtgt 56  Q
    ||||||||||||||||||| |||||||| |||| ||||| ||| ||||||||    
T  41877523 gctaataatttgagaaaattacataatttagtgtaattacaagtgtcggtgt 41877472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 67
Target Start/End: Complemental strand, 8010340 - 8010278
Alignment:
Q  5 gctaataatttgagaaaatcacataattcagtgcaattataagggtcggtgttgtgtccgtgt 67  Q
    ||||||||||||| ||||| | ||||||||||  ||||||||| |||| ||||||||| ||||    
T  8010340 gctaataatttgaaaaaattatataattcagtataattataagtgtcgatgttgtgtcggtgt 8010278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 129
Target Start/End: Complemental strand, 16164366 - 16164244
Alignment:
Q  7 taataatttgagaaaatcacataattcagtgcaattataagggtcggtgttgtgtccgtgtcggacatgacaagtgttcgacattaggacacgcctaatc 106  Q
    ||||||||||| |||||||||||||| | || ||||||| | |||  ||| ||||  |||| ||||   ||| |||| |||||  |||||||||||||||    
T  16164366 taataatttgaaaaaatcacataatttaatgtaattatatgtgtcattgtcgtgttggtgttggacgcaacacgtgtccgacaccaggacacgcctaatc 16164267  T
Q  107 cgagaagtgtatgagcttcatag 129  Q
    |||  |||||||| | |||||||    
T  16164266 cgaagagtgtatgtgtttcatag 16164244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 56
Target Start/End: Complemental strand, 22881668 - 22881618
Alignment:
Q  6 ctaataatttgagaaaatcacataattcagtgcaattataagggtcggtgt 56  Q
    |||||||||||| |||||||||||||| |||| ||||| ||| ||||||||    
T  22881668 ctaataatttgaaaaaatcacataatttagtgtaattacaagtgtcggtgt 22881618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 43
Target Start/End: Complemental strand, 27471619 - 27471581
Alignment:
Q  5 gctaataatttgagaaaatcacataattcagtgcaatta 43  Q
    |||||||||||||||||| |||||||||||||| |||||    
T  27471619 gctaataatttgagaaaagcacataattcagtgtaatta 27471581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 56
Target Start/End: Original strand, 37598839 - 37598888
Alignment:
Q  6 ctaataatttgagaaaatcacataattcagtgcaattataagggtcggtgt 56  Q
    |||||||||||| ||||||||| ||||||||| ||||||||| ||||||||    
T  37598839 ctaataatttgaaaaaatcaca-aattcagtgtaattataagtgtcggtgt 37598888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 56
Target Start/End: Complemental strand, 42359501 - 42359451
Alignment:
Q  6 ctaataatttgagaaaatcacataattcagtgcaattataagggtcggtgt 56  Q
    |||||||||||| ||||||||| ||||||||| ||||| ||| ||||||||    
T  42359501 ctaataatttgaaaaaatcacaaaattcagtgtaattacaagtgtcggtgt 42359451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 5 - 34
Target Start/End: Original strand, 1262890 - 1262919
Alignment:
Q  5 gctaataatttgagaaaatcacataattca 34  Q
    ||||||||||||||||||||||||||||||    
T  1262890 gctaataatttgagaaaatcacataattca 1262919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 5 - 58
Target Start/End: Original strand, 21378584 - 21378637
Alignment:
Q  5 gctaataatttgagaaaatcacataattcagtgcaattataagggtcggtgttg 58  Q
    |||||||| |||| ||||| ||||||||||||| ||||| ||| ||||||||||    
T  21378584 gctaataaattgaaaaaattacataattcagtgtaattacaagtgtcggtgttg 21378637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 2 - 43
Target Start/End: Complemental strand, 37055912 - 37055871
Alignment:
Q  2 actgctaataatttgagaaaatcacataattcagtgcaatta 43  Q
    |||||||||||||||||||||| |||||||| |||| |||||    
T  37055912 actgctaataatttgagaaaattacataatttagtgtaatta 37055871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 37
Target Start/End: Complemental strand, 10475030 - 10474998
Alignment:
Q  5 gctaataatttgagaaaatcacataattcagtg 37  Q
    |||||||| ||||||||||||||||||||||||    
T  10475030 gctaataacttgagaaaatcacataattcagtg 10474998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 6 - 106
Target Start/End: Complemental strand, 12707925 - 12707825
Alignment:
Q  6 ctaataatttgagaaaatcacataattcagtgcaattataagggtcggtgttgtgtccgtgtcggacatgacaagtgttcgacattaggacacgcctaat 105  Q
    |||||||||| ||||||||| |||||| |||||||||||| |  | |||||| |||| |||||| |||  ||| |||| | ||  ||||||||| |||||    
T  12707925 ctaataatttaagaaaatcatataatttagtgcaattatatgtattggtgttatgtcggtgtcgtacacaacacgtgtccaacgctaggacacgtctaat 12707826  T
Q  106 c 106  Q
    |    
T  12707825 c 12707825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 15641087 - 15641051
Alignment:
Q  1 cactgctaataatttgagaaaatcacataattcagtg 37  Q
    ||||||||||||||| |||||||||||| ||||||||    
T  15641087 cactgctaataatttaagaaaatcacatgattcagtg 15641051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 45
Target Start/End: Complemental strand, 16927238 - 16927198
Alignment:
Q  5 gctaataatttgagaaaatcacataattcagtgcaattata 45  Q
    ||||||||||||| ||||||| ||||||||||| |||||||    
T  16927238 gctaataatttgaaaaaatcatataattcagtgtaattata 16927198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 73
Target Start/End: Original strand, 17754317 - 17754385
Alignment:
Q  5 gctaataatttgagaaaatcacataattcagtgcaattataagggtcggtgttgtgtccgtgtcggaca 73  Q
    ||||||||||||| ||||| ||||||||||||| || |||| | ||| |||| ||||| |||| |||||    
T  17754317 gctaataatttgaaaaaattacataattcagtgtaactatatgtgtcagtgtggtgtcggtgttggaca 17754385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 37
Target Start/End: Complemental strand, 17831584 - 17831552
Alignment:
Q  5 gctaataatttgagaaaatcacataattcagtg 37  Q
    |||||||||||||||||||||||| ||||||||    
T  17831584 gctaataatttgagaaaatcacattattcagtg 17831552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 37
Target Start/End: Original strand, 19909303 - 19909335
Alignment:
Q  5 gctaataatttgagaaaatcacataattcagtg 37  Q
    |||||||||||||||||||||||||| ||||||    
T  19909303 gctaataatttgagaaaatcacataactcagtg 19909335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 46
Target Start/End: Complemental strand, 23531834 - 23531790
Alignment:
Q  2 actgctaataatttgagaaaatcacataattcagtgcaattataa 46  Q
    |||||||||||||||| || ||||||||||||| || ||||||||    
T  23531834 actgctaataatttgaaaatatcacataattcaatgtaattataa 23531790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 37
Target Start/End: Complemental strand, 26238165 - 26238133
Alignment:
Q  5 gctaataatttgagaaaatcacataattcagtg 37  Q
    ||||||||||||||||||| |||||||||||||    
T  26238165 gctaataatttgagaaaataacataattcagtg 26238133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 29229463 - 29229499
Alignment:
Q  1 cactgctaataatttgagaaaatcacataattcagtg 37  Q
    |||||||||||||||||||||||||||| ||| ||||    
T  29229463 cactgctaataatttgagaaaatcacatgatttagtg 29229499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 37
Target Start/End: Complemental strand, 40285707 - 40285675
Alignment:
Q  5 gctaataatttgagaaaatcacataattcagtg 37  Q
    |||||||||||||||||||| ||||||||||||    
T  40285707 gctaataatttgagaaaatcgcataattcagtg 40285675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 51; Significance: 3e-20; HSPs: 54)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 5 - 107
Target Start/End: Complemental strand, 30982931 - 30982829
Alignment:
Q  5 gctaataatttgagaaaatcacataattcagtgcaattataagggtcggtgttgtgtccgtgtcggacatgacaagtgttcgacattaggacacgcctaa 104  Q
    |||||| |||||||||||||||||| ||||||| ||||||||| |||||||| ||||| ||||| |||| |||| |||| |||||   ||||||||||||    
T  30982931 gctaatgatttgagaaaatcacatatttcagtgtaattataagtgtcggtgtcgtgtcggtgtcagacacgacacgtgtccgacaccgggacacgcctaa 30982832  T
Q  105 tcc 107  Q
    |||    
T  30982831 tcc 30982829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 19 - 129
Target Start/End: Complemental strand, 22234929 - 22234819
Alignment:
Q  19 aaaatcacataattcagtgcaattataagggtcggtgttgtgtccgtgtcggacatgacaagtgttcgacattaggacacgcctaatccgagaagtgtat 118  Q
    ||||||||||||||||||| |||| || | |||||||| ||||| ||||| |||| |||| |||| |||||  |||||||  ||||||||||||||||      
T  22234929 aaaatcacataattcagtgtaattctatgtgtcggtgtcgtgtcggtgtctgacacgacacgtgtccgacaccaggacacagctaatccgagaagtgttc 22234830  T
Q  119 gagcttcatag 129  Q
    | |||||||||    
T  22234829 gtgcttcatag 22234819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 2 - 116
Target Start/End: Original strand, 30838213 - 30838327
Alignment:
Q  2 actgctaataatttgagaaaatcacataattcagtgcaattataagggtcggtgttgtgtccgtgtcggacatgacaagtgttcgacattaggacacgcc 101  Q
    |||||||||||||||| ||||| | |||||| |||| |||||||||  ||||||| ||||| |||||||||  |||| |||| |||||  | ||||||||    
T  30838213 actgctaataatttgataaaattatataatttagtgtaattataagtatcggtgtcgtgtcagtgtcggacgcgacacgtgtccgacaccaagacacgcc 30838312  T
Q  102 taatccgagaagtgt 116  Q
    ||| ||||| |||||    
T  30838313 taacccgaggagtgt 30838327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 5 - 56
Target Start/End: Complemental strand, 8423771 - 8423720
Alignment:
Q  5 gctaataatttgagaaaatcacataattcagtgcaattataagggtcggtgt 56  Q
    ||||||||||||||||||||||||||||||||| ||||||||  ||||||||    
T  8423771 gctaataatttgagaaaatcacataattcagtgtaattataaatgtcggtgt 8423720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 6 - 129
Target Start/End: Original strand, 19482675 - 19482798
Alignment:
Q  6 ctaataatttgagaaaatcacataattcagtgcaattataagggtcggtgttgtgtccgtgtcggacatgacaagtgttcgacattaggacacgcctaat 105  Q
    |||||||||||| || |||||||||||| ||| ||||| ||| || ||||| ||||| || | ||||| |||| |||| ||||| | |||||| ||||||    
T  19482675 ctaataatttgaaaatatcacataattcggtgtaattacaagtgttggtgtcgtgtcggtattggacacgacacgtgtccgacactgggacacacctaat 19482774  T
Q  106 ccgagaagtgtatgagcttcatag 129  Q
    ||||| |||||  | |||||||||    
T  19482775 ccgaggagtgttcgtgcttcatag 19482798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 6 - 129
Target Start/End: Complemental strand, 24613753 - 24613630
Alignment:
Q  6 ctaataatttgagaaaatcacataattcagtgcaattataagggtcggtgttgtgtccgtgtcggacatgacaagtgttcgacattaggacacgcctaat 105  Q
    ||||||||||||||||||||||||||||| || || || ||| ||||||||  |||| ||||| |||| |||| ||||  ||||  |||||||| |||||    
T  24613753 ctaataatttgagaaaatcacataattcaatgtaagtacaagtgtcggtgtcatgtcggtgtcagacacgacacgtgtctgacaccaggacacgtctaat 24613654  T
Q  106 ccgagaagtgtatgagcttcatag 129  Q
    || || |||||  | |||||||||    
T  24613653 cctaggagtgtccgtgcttcatag 24613630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 6 - 56
Target Start/End: Complemental strand, 54580075 - 54580025
Alignment:
Q  6 ctaataatttgagaaaatcacataattcagtgcaattataagggtcggtgt 56  Q
    |||||||||||| ||||||||||||||||||| ||||||||| ||||||||    
T  54580075 ctaataatttgaaaaaatcacataattcagtgtaattataagtgtcggtgt 54580025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 5 - 58
Target Start/End: Original strand, 29205450 - 29205503
Alignment:
Q  5 gctaataatttgagaaaatcacataattcagtgcaattataagggtcggtgttg 58  Q
    ||||||||||||| ||||||||||||||||||| ||||| ||| ||||||||||    
T  29205450 gctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtgttg 29205503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 5 - 116
Target Start/End: Complemental strand, 3947819 - 3947714
Alignment:
Q  5 gctaataatttgagaaaatcacataattcagtgcaattataagggtcggtgttgtgtccgtgtcggacatgacaagtgttcgacattaggacacgcctaa 104  Q
    ||||||||||||| |||||| |||||||||||| ||||| ||| ||| ||||      ||||||||||| |||| |||| |||||  ||||||| |||||    
T  3947819 gctaataatttgaaaaaatcgcataattcagtgtaattacaagtgtcagtgt------cgtgtcggacacgacacgtgtccgacaccaggacacacctaa 3947726  T
Q  105 tccgagaagtgt 116  Q
    |||||| |||||    
T  3947725 tccgaggagtgt 3947714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 6 - 45
Target Start/End: Original strand, 36635331 - 36635370
Alignment:
Q  6 ctaataatttgagaaaatcacataattcagtgcaattata 45  Q
    |||||||||||||||||||||||||||||||| |||||||    
T  36635331 ctaataatttgagaaaatcacataattcagtgtaattata 36635370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 56257935 - 56257978
Alignment:
Q  1 cactgctaataatttgagaaaatcacataattcagtgcaattat 44  Q
    ||||||||||||||||||||||||| ||||||||||| ||||||    
T  56257935 cactgctaataatttgagaaaatcatataattcagtgtaattat 56257978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 7 - 45
Target Start/End: Original strand, 903930 - 903968
Alignment:
Q  7 taataatttgagaaaatcacataattcagtgcaattata 45  Q
    ||||||||||||||||||||||||||||||| |||||||    
T  903930 taataatttgagaaaatcacataattcagtgtaattata 903968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 7 - 73
Target Start/End: Original strand, 7012074 - 7012140
Alignment:
Q  7 taataatttgagaaaatcacataattcagtgcaattataagggtcggtgttgtgtccgtgtcggaca 73  Q
    ||||||||||||||||| |||||||||||||  || ||| |  ||||||||||||| ||||||||||    
T  7012074 taataatttgagaaaatgacataattcagtgtgatcataggtatcggtgttgtgtcggtgtcggaca 7012140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 7 - 45
Target Start/End: Complemental strand, 22440651 - 22440613
Alignment:
Q  7 taataatttgagaaaatcacataattcagtgcaattata 45  Q
    ||||||||||||||||||||||||||||||| |||||||    
T  22440651 taataatttgagaaaatcacataattcagtgtaattata 22440613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 7 - 56
Target Start/End: Complemental strand, 5775409 - 5775360
Alignment:
Q  7 taataatttgagaaaatcacataattcagtgcaattataagggtcggtgt 56  Q
    |||||||||||||||||||||||||| |||| ||||||| | ||||||||    
T  5775409 taataatttgagaaaatcacataattaagtgtaattatatgtgtcggtgt 5775360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 5 - 62
Target Start/End: Complemental strand, 11596405 - 11596348
Alignment:
Q  5 gctaataatttgagaaaatcacataattcagtgcaattataagggtcggtgttgtgtc 62  Q
    ||||||||||||| ||||||||||||||||||| ||||| ||| || ||||| |||||    
T  11596405 gctaataatttgaaaaaatcacataattcagtgtaattacaagtgtaggtgtcgtgtc 11596348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 14126168 - 14126095
Alignment:
Q  1 cactgctaataatttgagaaaatcacataattcagtgcaattataagggtc-ggtgttgtgtccgtgtcggaca 73  Q
    ||||| ||||||||||| ||| ||||||||||||||| ||||||||| |||  || | ||||||||||||||||    
T  14126168 cactgttaataatttgataaagtcacataattcagtgtaattataagtgtcatgtctcgtgtccgtgtcggaca 14126095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 15659817 - 15659756
Alignment:
Q  1 cactgctaataatttgagaaaatcacataattcagtgcaattataagggtcggtgttgtgtc 62  Q
    |||||||||||||||||||||||| |||||||| ||| ||||||| | || ||||| |||||    
T  15659817 cactgctaataatttgagaaaatctcataattcggtgtaattatatgtgttggtgtcgtgtc 15659756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 15029767 - 15029811
Alignment:
Q  1 cactgctaataatttgagaaaatcacataattcagtgcaattata 45  Q
    ||||||||||||||||| || |||||||||||||||| |||||||    
T  15029767 cactgctaataatttgaaaatatcacataattcagtgtaattata 15029811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 45
Target Start/End: Original strand, 40613456 - 40613496
Alignment:
Q  5 gctaataatttgagaaaatcacataattcagtgcaattata 45  Q
    ||||||| ||||||||||||||||||||||||| |||||||    
T  40613456 gctaatattttgagaaaatcacataattcagtgtaattata 40613496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 5 - 44
Target Start/End: Original strand, 16184823 - 16184862
Alignment:
Q  5 gctaataatttgagaaaatcacataattcagtgcaattat 44  Q
    ||||||||||||||||||||||| ||||||||| ||||||    
T  16184823 gctaataatttgagaaaatcacacaattcagtgaaattat 16184862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 5 - 44
Target Start/End: Original strand, 16189715 - 16189754
Alignment:
Q  5 gctaataatttgagaaaatcacataattcagtgcaattat 44  Q
    ||||| ||||||||||||||||||||||||||| ||||||    
T  16189715 gctaaaaatttgagaaaatcacataattcagtgtaattat 16189754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 17425446 - 17425403
Alignment:
Q  1 cactgctaataatttgagaaaatcacataattcagtgcaattat 44  Q
    |||| ||||||||||||||||||| |||||||||||| ||||||    
T  17425446 cactcctaataatttgagaaaatcgcataattcagtgtaattat 17425403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 2 - 45
Target Start/End: Complemental strand, 18576093 - 18576050
Alignment:
Q  2 actgctaataatttgagaaaatcacataattcagtgcaattata 45  Q
    |||||| ||||||||||||||||||||||||| ||| |||||||    
T  18576093 actgctgataatttgagaaaatcacataattcggtgtaattata 18576050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 21873428 - 21873385
Alignment:
Q  1 cactgctaataatttgagaaaatcacataattcagtgcaattat 44  Q
    |||||| |||||||||| ||||||||||||||||||| ||||||    
T  21873428 cactgcaaataatttgataaaatcacataattcagtgaaattat 21873385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 21929289 - 21929246
Alignment:
Q  1 cactgctaataatttgagaaaatcacataattcagtgcaattat 44  Q
    |||||| |||||||||| ||||||||||||||||||| ||||||    
T  21929289 cactgcaaataatttgataaaatcacataattcagtgaaattat 21929246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 5 - 56
Target Start/End: Original strand, 21945509 - 21945560
Alignment:
Q  5 gctaataatttgagaaaatcacataattcagtgcaattataagggtcggtgt 56  Q
    ||||||||||||| ||||| ||||||||||||| ||||| ||| ||||||||    
T  21945509 gctaataatttgaaaaaatgacataattcagtgtaattacaagtgtcggtgt 21945560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 5 - 56
Target Start/End: Complemental strand, 23293039 - 23292988
Alignment:
Q  5 gctaataatttgagaaaatcacataattcagtgcaattataagggtcggtgt 56  Q
    ||||||||||||| ||||||||||||||||||  ||||| ||| ||||||||    
T  23293039 gctaataatttgaaaaaatcacataattcagtataattacaagtgtcggtgt 23292988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 5 - 56
Target Start/End: Complemental strand, 28964301 - 28964250
Alignment:
Q  5 gctaataatttgagaaaatcacataattcagtgcaattataagggtcggtgt 56  Q
    ||||||||||||| ||||||||||||||||||| ||||| ||| ||| ||||    
T  28964301 gctaataatttgaaaaaatcacataattcagtgtaattacaagtgtctgtgt 28964250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 56
Target Start/End: Original strand, 4157157 - 4157206
Alignment:
Q  6 ctaataatttgagaaaatcacataattcagtgcaattataagggtcggtgt 56  Q
    |||||||||||| |||||||||||||| |||||||||| ||| ||||||||    
T  4157157 ctaataatttga-aaaatcacataatttagtgcaattacaagtgtcggtgt 4157206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 56
Target Start/End: Complemental strand, 7214574 - 7214524
Alignment:
Q  6 ctaataatttgagaaaatcacataattcagtgcaattataagggtcggtgt 56  Q
    ||||||||||||||||||||||||||| | || ||||||| | ||||||||    
T  7214574 ctaataatttgagaaaatcacataatttaatgtaattatatgcgtcggtgt 7214524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 56
Target Start/End: Complemental strand, 12797389 - 12797340
Alignment:
Q  6 ctaataatttgagaaaatcacataattcagtgcaattataagggtcggtgt 56  Q
    |||||||||||| ||||||||||||||||||| ||||| ||| ||||||||    
T  12797389 ctaataatttga-aaaatcacataattcagtgtaattacaagtgtcggtgt 12797340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 45
Target Start/End: Original strand, 24343515 - 24343553
Alignment:
Q  7 taataatttgagaaaatcacataattcagtgcaattata 45  Q
    ||||||||||||||||| ||||||||||||| |||||||    
T  24343515 taataatttgagaaaattacataattcagtgtaattata 24343553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 56
Target Start/End: Complemental strand, 35158037 - 35157987
Alignment:
Q  6 ctaataatttgagaaaatcacataattcagtgcaattataagggtcggtgt 56  Q
    |||||||||||  |||||||||||||| |||| ||||||||| ||||||||    
T  35158037 ctaataatttggaaaaatcacataatttagtgtaattataagtgtcggtgt 35157987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 35161038 - 35161084
Alignment:
Q  1 cactgctaataatttgagaaaatcacataattcagtgcaattataag 47  Q
    |||||||| |||||  ||||||||||||||||||||| |||||||||    
T  35161038 cactgctactaattcaagaaaatcacataattcagtgtaattataag 35161084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 7 - 56
Target Start/End: Complemental strand, 6485662 - 6485613
Alignment:
Q  7 taataatttgagaaaatcacataattcagtgcaattataagggtcggtgt 56  Q
    ||||||||||| |||||||||||||| |||| ||||| ||| ||||||||    
T  6485662 taataatttgaaaaaatcacataatttagtgtaattacaagtgtcggtgt 6485613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 8 - 45
Target Start/End: Original strand, 9996849 - 9996886
Alignment:
Q  8 aataatttgagaaaatcacataattcagtgcaattata 45  Q
    |||||||||||||||||||||||||||||  |||||||    
T  9996849 aataatttgagaaaatcacataattcagtataattata 9996886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 5 - 62
Target Start/End: Complemental strand, 12895169 - 12895112
Alignment:
Q  5 gctaataatttgagaaaatcacataattcagtgcaattataagggtcggtgttgtgtc 62  Q
    ||||||||||||| ||||||||||||||||  | ||||| ||| |||||||| |||||    
T  12895169 gctaataatttgaaaaaatcacataattcaaagtaattacaagtgtcggtgtcgtgtc 12895112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 58 - 131
Target Start/End: Complemental strand, 12895285 - 12895212
Alignment:
Q  58 gtgtccgtgtcggacatgacaagtgttcgacattaggacacgcctaatccgagaagtgtatgagcttcatagca 131  Q
    ||||| |||||||||| |||| || | ||||||  |||||||||||||||||| |||||  | |||||||||||    
T  12895285 gtgtcggtgtcggacacgacatgtatccgacatcgggacacgcctaatccgaggagtgttcgtgcttcatagca 12895212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 7 - 56
Target Start/End: Complemental strand, 12895325 - 12895276
Alignment:
Q  7 taataatttgagaaaatcacataattcagtgcaattataagggtcggtgt 56  Q
    ||||||||||| ||||||||||||||  ||| ||||||||| ||||||||    
T  12895325 taataatttgaaaaaatcacataattttgtgtaattataagtgtcggtgt 12895276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 13134452 - 13134513
Alignment:
Q  1 cactgctaataatttgagaaaatcacataattcagtgcaattataagggtcggtgttgtgtc 62  Q
    ||||||| ||||||| |||||||||||||||| |||| ||||||| | |||| ||| |||||    
T  13134452 cactgcttataatttaagaaaatcacataatttagtgtaattatatgtgtcgatgtcgtgtc 13134513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 26504356 - 26504303
Alignment:
Q  1 cactgctaataatttgagaaaatcacataattcagtgcaattataagggtcggt 54  Q
    ||||||||||||||| ||||||||| ||| ||||||| ||||||| | ||||||    
T  26504356 cactgctaataatttaagaaaatcaaatagttcagtgtaattatatgtgtcggt 26504303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 7 - 44
Target Start/End: Original strand, 32910559 - 32910596
Alignment:
Q  7 taataatttgagaaaatcacataattcagtgcaattat 44  Q
    ||||||||||||||||| ||||||||||||| ||||||    
T  32910559 taataatttgagaaaatgacataattcagtgtaattat 32910596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 5 - 34
Target Start/End: Complemental strand, 34200324 - 34200295
Alignment:
Q  5 gctaataatttgagaaaatcacataattca 34  Q
    ||||||||||||||||||||||||||||||    
T  34200324 gctaataatttgagaaaatcacataattca 34200295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 5 - 42
Target Start/End: Complemental strand, 38148778 - 38148741
Alignment:
Q  5 gctaataatttgagaaaatcacataattcagtgcaatt 42  Q
    ||||||| ||||||||||||||||||||||||| ||||    
T  38148778 gctaatagtttgagaaaatcacataattcagtgtaatt 38148741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 7 - 56
Target Start/End: Complemental strand, 40179687 - 40179638
Alignment:
Q  7 taataatttgagaaaatcacataattcagtgcaattataagggtcggtgt 56  Q
    ||||| ||||| ||||||||||||||||||| ||||||| | ||||||||    
T  40179687 taatagtttgaaaaaatcacataattcagtgtaattatatgcgtcggtgt 40179638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 73
Target Start/End: Original strand, 847957 - 848025
Alignment:
Q  5 gctaataatttgagaaaatcacataattcagtgcaattataagggtcggtgttgtgtccgtgtcggaca 73  Q
    ||||||||||||||||||| |||||||||| |  ||||| ||| ||||||||  |||  ||||||||||    
T  847957 gctaataatttgagaaaattacataattcactataattacaagtgtcggtgtcttgttggtgtcggaca 848025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 45
Target Start/End: Original strand, 1747218 - 1747258
Alignment:
Q  5 gctaataatttgagaaaatcacataattcagtgcaattata 45  Q
    |||||||| |||||||||||||||||||||||  |||||||    
T  1747218 gctaataaattgagaaaatcacataattcagtttaattata 1747258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 9 - 73
Target Start/End: Complemental strand, 5225662 - 5225598
Alignment:
Q  9 ataatttgagaaaatcacataattcagtgcaattataagggtcggtgttgtgtccgtgtcggaca 73  Q
    ||||||||||| ||| |||||||||| |||||| ||| | |||||||| ||||  ||||||||||    
T  5225662 ataatttgagataatgacataattcaatgcaataatatgtgtcggtgtcgtgttggtgtcggaca 5225598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 36
Target Start/End: Original strand, 7670689 - 7670721
Alignment:
Q  4 tgctaataatttgagaaaatcacataattcagt 36  Q
    |||||||| ||||||||||||||||||||||||    
T  7670689 tgctaatagtttgagaaaatcacataattcagt 7670721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 34
Target Start/End: Original strand, 12077831 - 12077863
Alignment:
Q  2 actgctaataatttgagaaaatcacataattca 34  Q
    |||| ||||||||||||||||||||||||||||    
T  12077831 actgttaataatttgagaaaatcacataattca 12077863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 37
Target Start/End: Complemental strand, 30522968 - 30522936
Alignment:
Q  5 gctaataatttgagaaaatcacataattcagtg 37  Q
    |||||| ||||||||||||||||||||||||||    
T  30522968 gctaattatttgagaaaatcacataattcagtg 30522936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 35952674 - 35952630
Alignment:
Q  1 cactgctaataatttgagaaaatcacataattcagtgcaattata 45  Q
    ||||||||||||||||| ||||||| |||||||| || |||||||    
T  35952674 cactgctaataatttgataaaatcatataattcaatgtaattata 35952630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 56
Target Start/End: Original strand, 49431031 - 49431083
Alignment:
Q  5 gctaataatttgagaaaa-tcacataattcagtgcaattataagggtcggtgt 56  Q
    ||||||||||||| |||| ||||||||||||||| ||||| ||| ||||||||    
T  49431031 gctaataatttgaaaaaaatcacataattcagtgtaattaaaagtgtcggtgt 49431083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0306 (Bit Score: 47; Significance: 6e-18; HSPs: 1)
Name: scaffold0306
Description:

Target: scaffold0306; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 6 - 56
Target Start/End: Original strand, 13407 - 13457
Alignment:
Q  6 ctaataatttgagaaaatcacataattcagtgcaattataagggtcggtgt 56  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  13407 ctaataatttgagaaaatcacataattcagtgcaattacaagggtcggtgt 13457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0152 (Bit Score: 47; Significance: 6e-18; HSPs: 1)
Name: scaffold0152
Description:

Target: scaffold0152; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 6 - 56
Target Start/End: Complemental strand, 21920 - 21870
Alignment:
Q  6 ctaataatttgagaaaatcacataattcagtgcaattataagggtcggtgt 56  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  21920 ctaataatttgagaaaatcacataattcagtgcaattacaagggtcggtgt 21870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0123 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0123
Description:

Target: scaffold0123; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 5 - 129
Target Start/End: Complemental strand, 44578 - 44454
Alignment:
Q  5 gctaataatttgagaaaatcacataattcagtgcaattataagggtcggtgttgtgtccgtgtcggacatgacaagtgttcgacattaggacacgcctaa 104  Q
    ||||| ||||||||||||||||||||||||||| ||||||| | |||||| | ||||| |||| |||||  ||| |||| ||||| | ||||| |  |||    
T  44578 gctaaaaatttgagaaaatcacataattcagtgtaattatatgtgtcggtatcgtgtcggtgttggacacaacacgtgtccgacactgggacatggttaa 44479  T
Q  105 tccgagaagtgtatgagcttcatag 129  Q
    || ||||||||| || |||||||||    
T  44478 tctgagaagtgtctgtgcttcatag 44454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 135369 - 135306
Alignment:
Q  1 cactgctaataatttgagaaaatcacataattcagtgcaattataagggtcggtgttgtgtccg 64  Q
    ||||||||||||||||||||||||||||||||| ||| ||||||| | |||||||| |||||||    
T  135369 cactgctaataatttgagaaaatcacataattctgtgtaattatatgtgtcggtgtcgtgtccg 135306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0171 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 2)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 19 - 129
Target Start/End: Original strand, 23531 - 23641
Alignment:
Q  19 aaaatcacataattcagtgcaattataagggtcggtgttgtgtccgtgtcggacatgacaagtgttcgacattaggacacgcctaatccgagaagtgtat 118  Q
    ||||||||||||||||||| ||||||||| ||| |||| || || |||||||||| || | |||| ||| | | |||||||| |||||| |||||||| |    
T  23531 aaaatcacataattcagtgtaattataagtgtcagtgtcgtttcggtgtcggacacgatatgtgtccgagactgggacacgcataatcccagaagtgttt 23630  T
Q  119 gagcttcatag 129  Q
    | |||||||||    
T  23631 gtgcttcatag 23641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0171; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 19 - 62
Target Start/End: Original strand, 23440 - 23483
Alignment:
Q  19 aaaatcacataattcagtgcaattataagggtcggtgttgtgtc 62  Q
    ||||||||||||||||||| ||||||||| |||||||| |||||    
T  23440 aaaatcacataattcagtgtaattataagtgtcggtgtcgtgtc 23483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0136 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0136
Description:

Target: scaffold0136; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 7 - 116
Target Start/End: Complemental strand, 3900 - 3791
Alignment:
Q  7 taataatttgagaaaatcacataattcagtgcaattataagggtcggtgttgtgtccgtgtcggacatgacaagtgttcgacattaggacacgcctaatc 106  Q
    ||||||||| | ||||||||||||||||||| ||||| ||| ||| |||| ||||  |||||||||| ||||  ||| ||||||   |||||||||||||    
T  3900 taataatttaaaaaaatcacataattcagtgtaattacaagtgtcagtgtcgtgttggtgtcggacacgacacatgtccgacatcgagacacgcctaatc 3801  T
Q  107 cgagaagtgt 116  Q
    |||| |||||    
T  3800 cgaggagtgt 3791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 8668 - 8783
Alignment:
Q  1 cactgctaataatttgagaaaatcacataattcagtgcaattataagggtcggtgttgtgtccgtgtcggacatgacaagtgttcgacattaggacacgc 100  Q
    |||| ||||||||||  |||||||||||| ||||||  ||||||||| |||||||| |||||  |||| ||| ||| | |||| ||| | || |||||||    
T  8668 cacttctaataatttaggaaaatcacatagttcagtataattataagtgtcggtgtcgtgtctatgtcagacgtgatacgtgtccgatactaagacacgc 8767  T
Q  101 ctaatccgagaagtgt 116  Q
    || |||||||||||||    
T  8768 cttatccgagaagtgt 8783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 5 - 56
Target Start/End: Original strand, 63779 - 63830
Alignment:
Q  5 gctaataatttgagaaaatcacataattcagtgcaattataagggtcggtgt 56  Q
    ||||||||||||||||||| ||||||||||||||||||| ||| ||||||||    
T  63779 gctaataatttgagaaaattacataattcagtgcaattacaagtgtcggtgt 63830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 6 - 116
Target Start/End: Complemental strand, 9799 - 9689
Alignment:
Q  6 ctaataatttgagaaaatcacataattcagtgcaattataagggtcggtgttgtgtccgtgtcggacatgacaagtgttcgacattaggacacgcctaat 105  Q
    ||||||||||||||||||||| |||||||||| ||||||| | |||||||| ||||  ||||| |||| ||||  |||  |||||  |||||||  ||||    
T  9799 ctaataatttgagaaaatcacttaattcagtgtaattatatgtgtcggtgtcgtgttggtgtcagacacgacacttgtctgacatcgggacacgtataat 9700  T
Q  106 ccgagaagtgt 116  Q
    ||||| |||||    
T  9699 ccgaggagtgt 9689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0652 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0652
Description:

Target: scaffold0652; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 519 - 464
Alignment:
Q  1 cactgctaataatttgagaaaatcacataattcagtgcaattataagggtcggtgt 56  Q
    ||||||||||||||||| ||||||||| ||||||||| ||||| ||| ||||||||    
T  519 cactgctaataatttgaaaaaatcacaaaattcagtgtaattacaagtgtcggtgt 464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 7 - 116
Target Start/End: Complemental strand, 225319 - 225210
Alignment:
Q  7 taataatttgagaaaatcacataattcagtgcaattataagggtcggtgtt-gtgtccgtgtcggaca-tgacaagtgttcgacattaggacacgcctaa 104  Q
    ||||||||||||||||| ||||||| || || ||||||||| ||| ||||| |||| ||||||||||| ||||  ||||||||||  |||||||||||||    
T  225319 taataatttgagaaaatgacataatacaatgtaattataagtgtc-gtgttggtgt-cgtgtcggacactgacgcgtgttcgacaccaggacacgcctaa 225222  T
Q  105 tccgagaagtgt 116  Q
    | |||| |||||    
T  225221 ttcgaggagtgt 225210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0236 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0236
Description:

Target: scaffold0236; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 7 - 61
Target Start/End: Complemental strand, 25819 - 25765
Alignment:
Q  7 taataatttgagaaaatcacataattcagtgcaattataagggtcggtgttgtgt 61  Q
    |||||||| ||||||||||||||||| |||| ||||||||| |||||||| ||||    
T  25819 taataattagagaaaatcacataatttagtgtaattataagtgtcggtgtcgtgt 25765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0223 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0223
Description:

Target: scaffold0223; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 5 - 62
Target Start/End: Original strand, 20178 - 20235
Alignment:
Q  5 gctaataatttgagaaaatcacataattcagtgcaattataagggtcggtgttgtgtc 62  Q
    ||||||||||||| ||||||||||||||||||| ||||| ||| ||| |||| |||||    
T  20178 gctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcagtgtcgtgtc 20235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0050 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 7 - 56
Target Start/End: Original strand, 70286 - 70335
Alignment:
Q  7 taataatttgagaaaatcacataattcagtgcaattataagggtcggtgt 56  Q
    ||||||||||| ||||| ||||||||||||| ||||||||| ||||||||    
T  70286 taataatttgaaaaaataacataattcagtgtaattataagtgtcggtgt 70335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0512 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0512
Description:

Target: scaffold0512; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 58 - 130
Target Start/End: Complemental strand, 5047 - 4975
Alignment:
Q  58 gtgtccgtgtcggacatgacaagtgttcgacattaggacacgcctaatccgagaagtgtatgagcttcatagc 130  Q
    ||||| |||||||||| |||| |||| |||||||  |||| |||||||||||| ||||| || ||||||||||    
T  5047 gtgtcggtgtcggacacgacacgtgtccgacattgagacatgcctaatccgaggagtgtctgtgcttcatagc 4975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 61
Target Start/End: Original strand, 92813 - 92869
Alignment:
Q  5 gctaataatttgagaaaatcacataattcagtgcaattataagggtcggtgttgtgt 61  Q
    ||||||||||||||||||| ||||||||||||| ||||| ||| ||| || ||||||    
T  92813 gctaataatttgagaaaattacataattcagtgtaattacaagtgtcagttttgtgt 92869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0450 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0450
Description:

Target: scaffold0450; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 6 - 129
Target Start/End: Complemental strand, 8687 - 8564
Alignment:
Q  6 ctaataatttgagaaaatcacataattcagtgcaattataagggtcggtgttgtgtccgtgtcggacatgacaagtgttcgacattaggacacgcctaat 105  Q
    |||||||||||| || |||||||||||| ||  ||||| ||  |||||||| ||||| || ||||||| || | |||| ||||| | | |||||||||||    
T  8687 ctaataatttgaaaatatcacataattcggtataattacaaatgtcggtgtcgtgtcggtatcggacacgatacgtgtccgacactggtacacgcctaat 8588  T
Q  106 ccgagaagtgtatgagcttcatag 129  Q
     |||| |||||  | |||||||||    
T  8587 tcgaggagtgtccgtgcttcatag 8564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0110 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 7 - 62
Target Start/End: Original strand, 28858 - 28913
Alignment:
Q  7 taataatttgagaaaatcacataattcagtgcaattataagggtcggtgttgtgtc 62  Q
    ||||||||| |||||||| ||||||||| || ||||||| | ||||||||||||||    
T  28858 taataatttaagaaaatcgcataattcaatgtaattatatgtgtcggtgttgtgtc 28913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0103 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0103
Description:

Target: scaffold0103; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 43
Target Start/End: Original strand, 51817 - 51855
Alignment:
Q  5 gctaataatttgagaaaatcacataattcagtgcaatta 43  Q
    ||||||||||||| ||||||||||||||||||| |||||    
T  51817 gctaataatttgaaaaaatcacataattcagtgtaatta 51855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 45
Target Start/End: Original strand, 90851 - 90889
Alignment:
Q  7 taataatttgagaaaatcacataattcagtgcaattata 45  Q
    ||||||||||||||||||| ||||||||||| |||||||    
T  90851 taataatttgagaaaatcatataattcagtgtaattata 90889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 56
Target Start/End: Complemental strand, 17801 - 17751
Alignment:
Q  6 ctaataatttgagaaaatcacataattcagtgcaattataagggtcggtgt 56  Q
    |||||||||||| |||||||||||||| |||| ||||| ||| ||||||||    
T  17801 ctaataatttgaaaaaatcacataatttagtgtaattacaagtgtcggtgt 17751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0361 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0361
Description:

Target: scaffold0361; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 6 - 43
Target Start/End: Original strand, 14537 - 14574
Alignment:
Q  6 ctaataatttgagaaaatcacataattcagtgcaatta 43  Q
    |||||||||||| ||||||||||||||||||| |||||    
T  14537 ctaataatttgaaaaaatcacataattcagtgtaatta 14574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0086 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0086
Description:

Target: scaffold0086; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 19 - 116
Target Start/End: Original strand, 2948 - 3045
Alignment:
Q  19 aaaatcacataattcagtgcaattataagggtcggtgttgtgtccgtgtcggacatgacaagtgttcgacattaggacacgcctaatccgagaagtgt 116  Q
    |||||||||||||| |||| ||||| |||  || |||| ||||| || || |||| |||| ||||||||||   | |||||||||||||||| |||||    
T  2948 aaaatcacataatttagtgtaattacaagtatcagtgtcgtgtcggtatcagacacgacacgtgttcgacaccggaacacgcctaatccgaggagtgt 3045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 7 - 56
Target Start/End: Original strand, 46690 - 46739
Alignment:
Q  7 taataatttgagaaaatcacataattcagtgcaattataagggtcggtgt 56  Q
    ||||||||||| ||||||||||||||||||| ||||| ||  ||||||||    
T  46690 taataatttgaaaaaatcacataattcagtgtaattacaaatgtcggtgt 46739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1528 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold1528
Description:

Target: scaffold1528; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 73
Target Start/End: Original strand, 1041 - 1109
Alignment:
Q  5 gctaataatttgagaaaatcacataattcagtgcaattataagggtcggtgttgtgtccgtgtcggaca 73  Q
    ||||||||||||| ||||| ||||||||||||| || |||| | ||| |||| ||||| |||| |||||    
T  1041 gctaataatttgaaaaaattacataattcagtgtaactatatgtgtcagtgtggtgtcggtgttggaca 1109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0085 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0085
Description:

Target: scaffold0085; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 6 - 34
Target Start/End: Original strand, 26400 - 26428
Alignment:
Q  6 ctaataatttgagaaaatcacataattca 34  Q
    |||||||||||||||||||||||||||||    
T  26400 ctaataatttgagaaaatcacataattca 26428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 7 - 55
Target Start/End: Original strand, 130490 - 130538
Alignment:
Q  7 taataatttgagaaaatcacataattcagtgcaattataagggtcggtg 55  Q
    ||||| ||||| ||||||||||||||||||| ||||| ||| |||||||    
T  130490 taatagtttgaaaaaatcacataattcagtgtaattacaagtgtcggtg 130538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University