View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF15373_low_16 (Length: 237)

Name: NF15373_low_16
Description: NF15373
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF15373_low_16
NF15373_low_16
[»] chr6 (35 HSPs)
chr6 (1-220)||(30865979-30866192)
chr6 (1-60)||(9025482-9025542)
chr6 (1-60)||(9027189-9027249)
chr6 (1-43)||(7265599-7265641)
chr6 (2-43)||(11591876-11591917)
chr6 (1-42)||(19040363-19040404)
chr6 (2-43)||(26562701-26562742)
chr6 (1-43)||(7086806-7086848)
chr6 (1-43)||(9617445-9617487)
chr6 (1-43)||(9629394-9629436)
chr6 (1-39)||(13360382-13360420)
chr6 (2-43)||(7377991-7378032)
chr6 (1-43)||(5732516-5732558)
chr6 (1-43)||(7996384-7996426)
chr6 (1-43)||(8022375-8022417)
chr6 (1-43)||(9195760-9195802)
chr6 (1-43)||(9658890-9658932)
chr6 (1-42)||(10339132-10339174)
chr6 (1-43)||(13364711-13364753)
chr6 (1-43)||(13851747-13851789)
chr6 (1-43)||(19044475-19044517)
chr6 (1-43)||(21924941-21924983)
chr6 (1-35)||(31579239-31579273)
chr6 (1-43)||(34073353-34073395)
chr6 (10-43)||(7027262-7027295)
chr6 (2-43)||(8931608-8931649)
chr6 (1-42)||(17302358-17302399)
chr6 (1-42)||(17341671-17341712)
chr6 (1-57)||(2117087-2117143)
chr6 (1-37)||(5462697-5462733)
chr6 (1-41)||(7151423-7151463)
chr6 (1-41)||(7569176-7569216)
chr6 (1-45)||(24832599-24832643)
chr6 (1-41)||(32511674-32511714)
chr6 (1-45)||(34446576-34446620)
[»] scaffold0020 (1 HSPs)
scaffold0020 (1-59)||(135301-135360)
[»] chr4 (19 HSPs)
chr4 (1-41)||(18576045-18576085)
chr4 (1-41)||(15659768-15659808)
chr4 (1-45)||(22440604-22440648)
chr4 (1-60)||(24343518-24343578)
chr4 (1-41)||(36635335-36635375)
chr4 (4-43)||(40613464-40613503)
chr4 (1-39)||(903933-903971)
chr4 (1-43)||(5775364-5775406)
chr4 (2-43)||(16189721-16189762)
chr4 (1-36)||(8423731-8423766)
chr4 (1-39)||(9996851-9996889)
chr4 (1-43)||(11110214-11110256)
chr4 (1-43)||(13134461-13134503)
chr4 (1-43)||(54580029-54580071)
chr4 (5-42)||(10499277-10499314)
chr4 (1-41)||(15029776-15029816)
chr4 (1-45)||(19230313-19230357)
chr4 (3-43)||(30982884-30982924)
chr4 (1-41)||(46180944-46180984)
[»] chr8 (23 HSPs)
chr8 (1-43)||(34897096-34897138)
chr8 (1-43)||(4786344-4786386)
chr8 (1-43)||(11927092-11927134)
chr8 (1-43)||(13844602-13844644)
chr8 (1-43)||(14134710-14134752)
chr8 (1-43)||(31236583-31236625)
chr8 (1-42)||(3025562-3025603)
chr8 (1-42)||(24362209-24362250)
chr8 (1-41)||(11803270-11803310)
chr8 (1-41)||(14731723-14731763)
chr8 (8-43)||(26902181-26902216)
chr8 (1-40)||(39954288-39954327)
chr8 (1-39)||(4611545-4611583)
chr8 (1-43)||(7658474-7658516)
chr8 (1-43)||(11944676-11944718)
chr8 (1-43)||(12606835-12606877)
chr8 (1-43)||(20679401-20679443)
chr8 (1-43)||(27213558-27213600)
chr8 (1-43)||(33405390-33405432)
chr8 (1-43)||(40332202-40332244)
chr8 (11-43)||(8847277-8847309)
chr8 (1-37)||(13203652-13203688)
chr8 (1-45)||(44067527-44067571)
[»] chr3 (30 HSPs)
chr3 (1-43)||(8789556-8789598)
chr3 (1-43)||(7928461-7928503)
chr3 (1-42)||(26290382-26290423)
chr3 (1-42)||(32804547-32804588)
chr3 (1-42)||(49505161-49505202)
chr3 (1-41)||(11313808-11313848)
chr3 (1-41)||(16192758-16192798)
chr3 (3-43)||(25093515-25093555)
chr3 (1-45)||(34307784-34307828)
chr3 (1-43)||(8039841-8039883)
chr3 (1-43)||(8383268-8383310)
chr3 (1-43)||(8930836-8930878)
chr3 (1-43)||(10690268-10690310)
chr3 (1-35)||(11251989-11252023)
chr3 (1-43)||(11658826-11658868)
chr3 (1-39)||(12704018-12704056)
chr3 (1-43)||(18426960-18427002)
chr3 (1-43)||(20691330-20691372)
chr3 (1-35)||(24633777-24633811)
chr3 (1-43)||(29508455-29508497)
chr3 (2-39)||(1438816-1438853)
chr3 (1-38)||(9624652-9624689)
chr3 (1-38)||(11493372-11493409)
chr3 (1-38)||(15812832-15812869)
chr3 (10-43)||(40993341-40993374)
chr3 (1-60)||(13620750-13620812)
chr3 (1-41)||(15314884-15314924)
chr3 (1-45)||(24205045-24205089)
chr3 (1-45)||(25365473-25365517)
chr3 (1-41)||(25948895-25948935)
[»] chr1 (36 HSPs)
chr1 (1-43)||(1864886-1864928)
chr1 (1-43)||(9709831-9709873)
chr1 (1-43)||(10572595-10572637)
chr1 (1-43)||(44482241-44482283)
chr1 (1-42)||(7918218-7918259)
chr1 (1-42)||(25361897-25361938)
chr1 (1-60)||(20157338-20157398)
chr1 (1-41)||(25098563-25098603)
chr1 (1-40)||(19324573-19324612)
chr1 (5-43)||(34371728-34371766)
chr1 (1-43)||(36878472-36878514)
chr1 (1-39)||(40181882-40181920)
chr1 (1-43)||(43492500-43492542)
chr1 (5-42)||(10233268-10233305)
chr1 (1-41)||(6427361-6427401)
chr1 (1-45)||(12443464-12443508)
chr1 (9-45)||(17705590-17705626)
chr1 (1-44)||(17831536-17831579)
chr1 (8-43)||(30749858-30749893)
chr1 (8-43)||(30771309-30771344)
chr1 (1-36)||(34298447-34298482)
chr1 (1-43)||(1486715-1486757)
chr1 (1-43)||(9828055-9828097)
chr1 (1-39)||(14332652-14332690)
chr1 (1-43)||(31015054-31015096)
chr1 (1-58)||(34712373-34712431)
chr1 (1-43)||(38503331-38503373)
chr1 (1-42)||(398772-398813)
chr1 (10-43)||(13997903-13997936)
chr1 (2-43)||(23636055-23636096)
chr1 (2-43)||(25272494-25272535)
chr1 (1-41)||(13436469-13436509)
chr1 (1-41)||(17425101-17425141)
chr1 (1-41)||(19562629-19562669)
chr1 (1-41)||(27471574-27471614)
chr1 (1-41)||(36906008-36906048)
[»] scaffold0123 (1 HSPs)
scaffold0123 (2-43)||(44531-44572)
[»] chr7 (31 HSPs)
chr7 (3-43)||(22602716-22602756)
chr7 (1-43)||(1433465-1433507)
chr7 (1-58)||(5548687-5548745)
chr7 (1-43)||(9482945-9482987)
chr7 (1-43)||(20549802-20549844)
chr7 (1-42)||(17851442-17851483)
chr7 (1-42)||(22868053-22868094)
chr7 (1-42)||(32308131-32308172)
chr7 (1-45)||(12278846-12278890)
chr7 (1-41)||(17307904-17307944)
chr7 (4-43)||(5835261-5835300)
chr7 (1-40)||(16341507-16341546)
chr7 (1-35)||(2424625-2424659)
chr7 (1-43)||(3721104-3721146)
chr7 (1-43)||(6630918-6630960)
chr7 (1-43)||(7328697-7328739)
chr7 (1-43)||(15902833-15902875)
chr7 (1-43)||(18233604-18233646)
chr7 (1-43)||(19206061-19206103)
chr7 (1-43)||(19992012-19992054)
chr7 (1-43)||(26329388-26329430)
chr7 (1-43)||(27732245-27732287)
chr7 (1-43)||(28155581-28155623)
chr7 (1-35)||(29787383-29787417)
chr7 (11-43)||(640134-640166)
chr7 (3-43)||(3520348-3520388)
chr7 (1-41)||(5233640-5233680)
chr7 (1-45)||(8239054-8239098)
chr7 (1-33)||(30731048-30731080)
chr7 (1-41)||(35297680-35297720)
chr7 (1-45)||(43250004-43250048)
[»] chr5 (25 HSPs)
chr5 (1-41)||(6471897-6471937)
chr5 (3-43)||(41091263-41091303)
chr5 (1-40)||(24273039-24273078)
chr5 (1-40)||(24389136-24389175)
chr5 (1-43)||(3966514-3966556)
chr5 (1-43)||(18421847-18421889)
chr5 (1-43)||(28588680-28588722)
chr5 (1-43)||(30502394-30502436)
chr5 (1-43)||(30542737-30542779)
chr5 (1-58)||(39205891-39205949)
chr5 (1-45)||(5467982-5468026)
chr5 (3-43)||(23015995-23016035)
chr5 (1-59)||(2436933-2436992)
chr5 (8-43)||(39758290-39758325)
chr5 (1-43)||(14873528-14873570)
chr5 (1-43)||(16203801-16203843)
chr5 (1-43)||(36838554-36838596)
chr5 (1-42)||(7175026-7175067)
chr5 (1-42)||(27144474-27144515)
chr5 (2-43)||(34879362-34879403)
chr5 (1-38)||(35017048-35017085)
chr5 (1-37)||(17593734-17593770)
chr5 (1-33)||(19438354-19438386)
chr5 (1-45)||(25863215-25863259)
chr5 (1-45)||(31264449-31264493)
[»] chr2 (24 HSPs)
chr2 (1-41)||(21616773-21616813)
chr2 (4-43)||(30471052-30471091)
chr2 (1-43)||(5367203-5367245)
chr2 (1-43)||(23718037-23718079)
chr2 (1-43)||(24105709-24105751)
chr2 (1-43)||(37411250-37411292)
chr2 (1-43)||(44860331-44860373)
chr2 (1-42)||(35449524-35449565)
chr2 (3-43)||(38355893-38355933)
chr2 (8-43)||(20242733-20242768)
chr2 (1-43)||(5473339-5473381)
chr2 (1-43)||(18276532-18276574)
chr2 (5-43)||(18889597-18889635)
chr2 (1-35)||(21782832-21782866)
chr2 (1-39)||(28677920-28677958)
chr2 (1-43)||(30527601-30527643)
chr2 (1-43)||(34691811-34691853)
chr2 (1-43)||(34714223-34714265)
chr2 (1-43)||(39279686-39279728)
chr2 (11-44)||(28524447-28524480)
chr2 (1-42)||(31808088-31808129)
chr2 (1-45)||(10535763-10535807)
chr2 (4-40)||(15909641-15909677)
chr2 (11-43)||(41843462-41843494)
[»] scaffold0168 (1 HSPs)
scaffold0168 (1-43)||(21054-21096)
[»] scaffold0044 (1 HSPs)
scaffold0044 (1-43)||(53191-53233)
[»] scaffold0036 (1 HSPs)
scaffold0036 (1-43)||(9753-9795)
[»] scaffold0022 (1 HSPs)
scaffold0022 (1-43)||(90854-90896)
[»] scaffold0018 (1 HSPs)
scaffold0018 (1-34)||(192264-192297)
[»] scaffold0008 (1 HSPs)
scaffold0008 (1-42)||(263379-263420)


Alignment Details
Target: chr6 (Bit Score: 154; Significance: 8e-82; HSPs: 35)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 154; E-Value: 8e-82
Query Start/End: Original strand, 1 - 220
Target Start/End: Complemental strand, 30866192 - 30865979
Alignment:
Q  1 taatttgagaaaatcacataattcggtgtaattatatgtgtcgtgacgtgtccgacaccgtgtcgcctctaatctgaggagtctgcatggaataattgag 100  Q
    ||||||||||||||||||||||||  ||||||||||||||||| ||||      ||||||||||||||||||||||||||||||||||||||||||||||    
T  30866192 taatttgagaaaatcacataattcaatgtaattatatgtgtcg-gacg------acaccgtgtcgcctctaatctgaggagtctgcatggaataattgag 30866100  T
Q  101 gtgtccgacactgtgcttcataggttaagacttttttggtgtctctcagctcactaagctcactagtc-aaggtgtctgcatggaataattgacttcatt 199  Q
    ||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||    
T  30866099 gtgtccgacaccgtgcttcataggttaaaacttttttggtgtctctcagctcactaagctcactaatcaaaggtgtctgcatggaataattgacttcatt 30866000  T
Q  200 tatttttaagaagccaaacta 220  Q
    |||||| ||||| ||||||||    
T  30865999 tattttgaagaacccaaacta 30865979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 9025542 - 9025482
Alignment:
Q  1 taatttgagaaaatcacataattcggtgtaattatatgtgtc-gtgacgtgtccgacaccg 60  Q
    |||||||||||||||||||||||| ||||||||||||||||| ||| ||||||||||||||    
T  9025542 taatttgagaaaatcacataattcagtgtaattatatgtgtcggtgtcgtgtccgacaccg 9025482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 9027189 - 9027249
Alignment:
Q  1 taatttgagaaaatcacataattcggtgtaattatatgtgtc-gtgacgtgtccgacaccg 60  Q
    |||||||||| ||||||||||||| ||||||||||||||||| ||| ||||||||||||||    
T  9027189 taatttgagataatcacataattccgtgtaattatatgtgtcggtgtcgtgtccgacaccg 9027249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 7265641 - 7265599
Alignment:
Q  1 taatttgagaaaatcacataattcggtgtaattatatgtgtcg 43  Q
    |||||||||||||||||||||||| ||||||||||||||||||    
T  7265641 taatttgagaaaatcacataattcagtgtaattatatgtgtcg 7265599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 2 - 43
Target Start/End: Complemental strand, 11591917 - 11591876
Alignment:
Q  2 aatttgagaaaatcacataattcggtgtaattatatgtgtcg 43  Q
    ||||||||||||||||||||||| ||||||||||||||||||    
T  11591917 aatttgagaaaatcacataattcagtgtaattatatgtgtcg 11591876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 19040363 - 19040404
Alignment:
Q  1 taatttgagaaaatcacataattcggtgtaattatatgtgtc 42  Q
    |||||||||||||||||||||||| |||||||||||||||||    
T  19040363 taatttgagaaaatcacataattcagtgtaattatatgtgtc 19040404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 2 - 43
Target Start/End: Original strand, 26562701 - 26562742
Alignment:
Q  2 aatttgagaaaatcacataattcggtgtaattatatgtgtcg 43  Q
    ||||||||||||||||||||||| ||||||||||||||||||    
T  26562701 aatttgagaaaatcacataattcagtgtaattatatgtgtcg 26562742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 7086806 - 7086848
Alignment:
Q  1 taatttgagaaaatcacataattcggtgtaattatatgtgtcg 43  Q
    |||||||||||||||||||||||  ||||||||||||||||||    
T  7086806 taatttgagaaaatcacataatttagtgtaattatatgtgtcg 7086848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 9617445 - 9617487
Alignment:
Q  1 taatttgagaaaatcacataattcggtgtaattatatgtgtcg 43  Q
    ||||||||||||||||||||||||  |||||||||||||||||    
T  9617445 taatttgagaaaatcacataattcaatgtaattatatgtgtcg 9617487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 9629394 - 9629436
Alignment:
Q  1 taatttgagaaaatcacataattcggtgtaattatatgtgtcg 43  Q
    ||||||||||||||||||||||||  |||||||||||||||||    
T  9629394 taatttgagaaaatcacataattcaatgtaattatatgtgtcg 9629436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 13360420 - 13360382
Alignment:
Q  1 taatttgagaaaatcacataattcggtgtaattatatgt 39  Q
    |||||||||||||||||||||||| ||||||||||||||    
T  13360420 taatttgagaaaatcacataattcagtgtaattatatgt 13360382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 2 - 43
Target Start/End: Original strand, 7377991 - 7378032
Alignment:
Q  2 aatttgagaaaatcacataattcggtgtaattatatgtgtcg 43  Q
    |||||||||||||||||||||||  |||||||||||||||||    
T  7377991 aatttgagaaaatcacataattcaatgtaattatatgtgtcg 7378032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 5732558 - 5732516
Alignment:
Q  1 taatttgagaaaatcacataattcggtgtaattatatgtgtcg 43  Q
    |||||||||||||||||||| ||  ||||||||||||||||||    
T  5732558 taatttgagaaaatcacatattttagtgtaattatatgtgtcg 5732516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 7996426 - 7996384
Alignment:
Q  1 taatttgagaaaatcacataattcggtgtaattatatgtgtcg 43  Q
    |||||||||||||||| ||||||| ||||||||||||| ||||    
T  7996426 taatttgagaaaatcatataattcagtgtaattatatgcgtcg 7996384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 8022375 - 8022417
Alignment:
Q  1 taatttgagaaaatcacataattcggtgtaattatatgtgtcg 43  Q
    |||||||||||||||| ||||||| ||||||||||||| ||||    
T  8022375 taatttgagaaaatcatataattcagtgtaattatatgcgtcg 8022417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 9195802 - 9195760
Alignment:
Q  1 taatttgagaaaatcacataattcggtgtaattatatgtgtcg 43  Q
    |||||||||||||| ||||||||  ||||||||||||||||||    
T  9195802 taatttgagaaaatgacataatttagtgtaattatatgtgtcg 9195760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 9658890 - 9658932
Alignment:
Q  1 taatttgagaaaatcacataattcggtgtaattatatgtgtcg 43  Q
    |||||| ||||||||||||||||| |||||||||||| |||||    
T  9658890 taatttaagaaaatcacataattcagtgtaattatatttgtcg 9658932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 10339174 - 10339132
Alignment:
Q  1 taatttgagaaaatcacataattcggtg-taattatatgtgtc 42  Q
    |||||||||||||||||||||||| ||| ||||||||||||||    
T  10339174 taatttgagaaaatcacataattcagtgttaattatatgtgtc 10339132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 13364753 - 13364711
Alignment:
Q  1 taatttgagaaaatcacataattcggtgtaattatatgtgtcg 43  Q
    |||||||||||||||| ||||||| ||||||| ||||||||||    
T  13364753 taatttgagaaaatcatataattcagtgtaatcatatgtgtcg 13364711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 13851747 - 13851789
Alignment:
Q  1 taatttgagaaaatcacataattcggtgtaattatatgtgtcg 43  Q
    |||||||||||||| || |||||| ||||||||||||||||||    
T  13851747 taatttgagaaaataacgtaattcagtgtaattatatgtgtcg 13851789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 19044475 - 19044517
Alignment:
Q  1 taatttgagaaaatcacataattcggtgtaattatatgtgtcg 43  Q
    ||||||||||| |||||||||||| |||| |||||||||||||    
T  19044475 taatttgagaatatcacataattcagtgttattatatgtgtcg 19044517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 21924983 - 21924941
Alignment:
Q  1 taatttgagaaaatcacataattcggtgtaattatatgtgtcg 43  Q
    ||||||||||| |||| ||||||| ||||||||||||||||||    
T  21924983 taatttgagaatatcaaataattcagtgtaattatatgtgtcg 21924941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 35
Target Start/End: Complemental strand, 31579273 - 31579239
Alignment:
Q  1 taatttgagaaaatcacataattcggtgtaattat 35  Q
    |||||||||||||||||||||||| ||||||||||    
T  31579273 taatttgagaaaatcacataattcagtgtaattat 31579239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 34073395 - 34073353
Alignment:
Q  1 taatttgagaaaatcacataattcggtgtaattatatgtgtcg 43  Q
    ||||||||||||||| |||||||| ||||||||||||| ||||    
T  34073395 taatttgagaaaatctcataattcagtgtaattatatgggtcg 34073353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 10 - 43
Target Start/End: Original strand, 7027262 - 7027295
Alignment:
Q  10 aaaatcacataattcggtgtaattatatgtgtcg 43  Q
    ||||||||||||||| ||||||||||||||||||    
T  7027262 aaaatcacataattcagtgtaattatatgtgtcg 7027295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 2 - 43
Target Start/End: Complemental strand, 8931649 - 8931608
Alignment:
Q  2 aatttgagaaaatcacataattcggtgtaattatatgtgtcg 43  Q
    ||||||||||||| ||||||||| || |||||||||||||||    
T  8931649 aatttgagaaaataacataattcagtataattatatgtgtcg 8931608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 17302358 - 17302399
Alignment:
Q  1 taatttgagaaaatcacataattcggtgtaattatatgtgtc 42  Q
    |||||| ||||||||||||||||  |||||||||||||||||    
T  17302358 taatttaagaaaatcacataattttgtgtaattatatgtgtc 17302399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 17341712 - 17341671
Alignment:
Q  1 taatttgagaaaatcacataattcggtgtaattatatgtgtc 42  Q
    |||||||| ||||||||||||||| ||||||||||| |||||    
T  17341712 taatttgataaaatcacataattcagtgtaattataagtgtc 17341671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 2117087 - 2117143
Alignment:
Q  1 taatttgagaaaatcacataattcggtgtaattatatgtgtcgtgacgtgtccgaca 57  Q
    |||||||| |||||||||||||||  || ||||||| |||||||| |||||| ||||    
T  2117087 taatttgaaaaaatcacataattcaatgcaattataagtgtcgtgtcgtgtcggaca 2117143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 5462697 - 5462733
Alignment:
Q  1 taatttgagaaaatcacataattcggtgtaattatat 37  Q
    ||||||||||||||||||||||||  |||||||||||    
T  5462697 taatttgagaaaatcacataattcattgtaattatat 5462733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 7151423 - 7151463
Alignment:
Q  1 taatttgagaaaatcacataattcggtgtaattatatgtgt 41  Q
    |||||||| ||||||||||||||  ||||||||||||||||    
T  7151423 taatttgaaaaaatcacataattaagtgtaattatatgtgt 7151463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 7569216 - 7569176
Alignment:
Q  1 taatttgagaaaatcacataattcggtgtaattatatgtgt 41  Q
    |||||||||||||| ||||||||| ||||||||||| ||||    
T  7569216 taatttgagaaaattacataattcagtgtaattataggtgt 7569176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 24832599 - 24832643
Alignment:
Q  1 taatttgagaaaatcacataattcggtgtaattatatgtgtcgtg 45  Q
    |||||||||||||||  ||||||  ||||||||||||||||||||    
T  24832599 taatttgagaaaatcttataatttagtgtaattatatgtgtcgtg 24832643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 32511714 - 32511674
Alignment:
Q  1 taatttgagaaaatcacataattcggtgtaattatatgtgt 41  Q
    |||||| ||||||||||||||||| ||||||||||| ||||    
T  32511714 taatttaagaaaatcacataattcagtgtaattataagtgt 32511674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 34446576 - 34446620
Alignment:
Q  1 taatttgagaaaatcacataattcggtgtaattatatgtgtcgtg 45  Q
    |||||||||||||| ||||||||| ||||||| ||| ||||||||    
T  34446576 taatttgagaaaatgacataattcagtgtaatcataggtgtcgtg 34446620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 135360 - 135301
Alignment:
Q  1 taatttgagaaaatcacataattcggtgtaattatatgtgtc-gtgacgtgtccgacacc 59  Q
    |||||||||||||||||||||||| ||||||||||||||||| ||| |||||||||||||    
T  135360 taatttgagaaaatcacataattctgtgtaattatatgtgtcggtgtcgtgtccgacacc 135301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 19)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 18576085 - 18576045
Alignment:
Q  1 taatttgagaaaatcacataattcggtgtaattatatgtgt 41  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  18576085 taatttgagaaaatcacataattcggtgtaattatatgtgt 18576045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 15659808 - 15659768
Alignment:
Q  1 taatttgagaaaatcacataattcggtgtaattatatgtgt 41  Q
    ||||||||||||||| |||||||||||||||||||||||||    
T  15659808 taatttgagaaaatctcataattcggtgtaattatatgtgt 15659768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 22440648 - 22440604
Alignment:
Q  1 taatttgagaaaatcacataattcggtgtaattatatgtgtcgtg 45  Q
    |||||||||||||||||||||||| ||||||||||||||| ||||    
T  22440648 taatttgagaaaatcacataattcagtgtaattatatgtgacgtg 22440604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 24343518 - 24343578
Alignment:
Q  1 taatttgagaaaatcacataattcggtgtaattatatgtgtcgtgac-gtgtccgacaccg 60  Q
    |||||||||||||| ||||||||| ||||||||||| |||||||| | |||||||||||||    
T  24343518 taatttgagaaaattacataattcagtgtaattataggtgtcgtgtcggtgtccgacaccg 24343578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 36635335 - 36635375
Alignment:
Q  1 taatttgagaaaatcacataattcggtgtaattatatgtgt 41  Q
    |||||||||||||||||||||||| ||||||||||||||||    
T  36635335 taatttgagaaaatcacataattcagtgtaattatatgtgt 36635375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 4 - 43
Target Start/End: Original strand, 40613464 - 40613503
Alignment:
Q  4 tttgagaaaatcacataattcggtgtaattatatgtgtcg 43  Q
    ||||||||||||||||||||| ||||||||||||||||||    
T  40613464 tttgagaaaatcacataattcagtgtaattatatgtgtcg 40613503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 903933 - 903971
Alignment:
Q  1 taatttgagaaaatcacataattcggtgtaattatatgt 39  Q
    |||||||||||||||||||||||| ||||||||||||||    
T  903933 taatttgagaaaatcacataattcagtgtaattatatgt 903971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 5775406 - 5775364
Alignment:
Q  1 taatttgagaaaatcacataattcggtgtaattatatgtgtcg 43  Q
    |||||||||||||||||||||||  ||||||||||||||||||    
T  5775406 taatttgagaaaatcacataattaagtgtaattatatgtgtcg 5775364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 2 - 43
Target Start/End: Original strand, 16189721 - 16189762
Alignment:
Q  2 aatttgagaaaatcacataattcggtgtaattatatgtgtcg 43  Q
    ||||||||||||||||||||||| |||||||||| |||||||    
T  16189721 aatttgagaaaatcacataattcagtgtaattatgtgtgtcg 16189762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 36
Target Start/End: Complemental strand, 8423766 - 8423731
Alignment:
Q  1 taatttgagaaaatcacataattcggtgtaattata 36  Q
    |||||||||||||||||||||||| |||||||||||    
T  8423766 taatttgagaaaatcacataattcagtgtaattata 8423731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 9996851 - 9996889
Alignment:
Q  1 taatttgagaaaatcacataattcggtgtaattatatgt 39  Q
    |||||||||||||||||||||||| || |||||||||||    
T  9996851 taatttgagaaaatcacataattcagtataattatatgt 9996889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 11110214 - 11110256
Alignment:
Q  1 taatttgagaaaatcacataattcggtgtaattatatgtgtcg 43  Q
    |||||||||||||| |||||||||| |||||| ||||||||||    
T  11110214 taatttgagaaaatgacataattcgatgtaatcatatgtgtcg 11110256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 13134461 - 13134503
Alignment:
Q  1 taatttgagaaaatcacataattcggtgtaattatatgtgtcg 43  Q
    |||||| ||||||||||||||||  ||||||||||||||||||    
T  13134461 taatttaagaaaatcacataatttagtgtaattatatgtgtcg 13134503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 54580071 - 54580029
Alignment:
Q  1 taatttgagaaaatcacataattcggtgtaattatatgtgtcg 43  Q
    |||||||| ||||||||||||||| ||||||||||| ||||||    
T  54580071 taatttgaaaaaatcacataattcagtgtaattataagtgtcg 54580029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 5 - 42
Target Start/End: Complemental strand, 10499314 - 10499277
Alignment:
Q  5 ttgagaaaatcacataattcggtgtaattatatgtgtc 42  Q
    |||||||||||||||||||  |||||||||||||||||    
T  10499314 ttgagaaaatcacataatttagtgtaattatatgtgtc 10499277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 15029776 - 15029816
Alignment:
Q  1 taatttgagaaaatcacataattcggtgtaattatatgtgt 41  Q
    |||||||| || |||||||||||| ||||||||||||||||    
T  15029776 taatttgaaaatatcacataattcagtgtaattatatgtgt 15029816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 19230357 - 19230313
Alignment:
Q  1 taatttgagaaaatcacataattcggtgtaattatatgtgtcgtg 45  Q
    |||||||||||||| |||||||||  |||||||||| ||||||||    
T  19230357 taatttgagaaaataacataattcaatgtaattataggtgtcgtg 19230313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 43
Target Start/End: Complemental strand, 30982924 - 30982884
Alignment:
Q  3 atttgagaaaatcacataattcggtgtaattatatgtgtcg 43  Q
    |||||||||||||||||| ||| ||||||||||| ||||||    
T  30982924 atttgagaaaatcacatatttcagtgtaattataagtgtcg 30982884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 46180984 - 46180944
Alignment:
Q  1 taatttgagaaaatcacataattcggtgtaattatatgtgt 41  Q
    |||||||||||||| ||||||||| ||||||| ||||||||    
T  46180984 taatttgagaaaataacataattcagtgtaatcatatgtgt 46180944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 23)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 34897096 - 34897138
Alignment:
Q  1 taatttgagaaaatcacataattcggtgtaattatatgtgtcg 43  Q
    |||||||||||||||||||||||| ||||||||||||||||||    
T  34897096 taatttgagaaaatcacataattcagtgtaattatatgtgtcg 34897138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 4786386 - 4786344
Alignment:
Q  1 taatttgagaaaatcacataattcggtgtaattatatgtgtcg 43  Q
    |||||| ||||||||||||||||| ||||||||||||||||||    
T  4786386 taatttaagaaaatcacataattcagtgtaattatatgtgtcg 4786344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 11927134 - 11927092
Alignment:
Q  1 taatttgagaaaatcacataattcggtgtaattatatgtgtcg 43  Q
    |||||||| ||||||||||||||| ||||||||||||||||||    
T  11927134 taatttgataaaatcacataattcagtgtaattatatgtgtcg 11927092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 13844644 - 13844602
Alignment:
Q  1 taatttgagaaaatcacataattcggtgtaattatatgtgtcg 43  Q
    |||||||||||||||||||||||  ||||||||||||||||||    
T  13844644 taatttgagaaaatcacataattgagtgtaattatatgtgtcg 13844602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 14134710 - 14134752
Alignment:
Q  1 taatttgagaaaatcacataattcggtgtaattatatgtgtcg 43  Q
    |||||||||||||||||||||||| |||||||||||| |||||    
T  14134710 taatttgagaaaatcacataattcagtgtaattatatatgtcg 14134752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 31236625 - 31236583
Alignment:
Q  1 taatttgagaaaatcacataattcggtgtaattatatgtgtcg 43  Q
    ||||||||||||||||||||||||  |||||||||||||||||    
T  31236625 taatttgagaaaatcacataattcaatgtaattatatgtgtcg 31236583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 3025562 - 3025603
Alignment:
Q  1 taatttgagaaaatcacataattcggtgtaattatatgtgtc 42  Q
    |||||||||||||||||||||||| ||||||||||| |||||    
T  3025562 taatttgagaaaatcacataattcagtgtaattataggtgtc 3025603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 24362250 - 24362209
Alignment:
Q  1 taatttgagaaaatcacataattcggtgtaattatatgtgtc 42  Q
    |||||||||| ||||||||||||| |||||||||||||||||    
T  24362250 taatttgagagaatcacataattcagtgtaattatatgtgtc 24362209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 11803270 - 11803310
Alignment:
Q  1 taatttgagaaaatcacataattcggtgtaattatatgtgt 41  Q
    |||||| ||||||||||||||||| ||||||||||||||||    
T  11803270 taatttaagaaaatcacataattcagtgtaattatatgtgt 11803310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 14731723 - 14731763
Alignment:
Q  1 taatttgagaaaatcacataattcggtgtaattatatgtgt 41  Q
    |||||||||||||||||||||||  ||||||||||||||||    
T  14731723 taatttgagaaaatcacataatttagtgtaattatatgtgt 14731763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 8 - 43
Target Start/End: Complemental strand, 26902216 - 26902181
Alignment:
Q  8 agaaaatcacataattcggtgtaattatatgtgtcg 43  Q
    ||||||||||||||||| ||||||||||||||||||    
T  26902216 agaaaatcacataattcagtgtaattatatgtgtcg 26902181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 39954327 - 39954288
Alignment:
Q  1 taatttgagaaaatcacataattcggtgtaattatatgtg 40  Q
    |||||||||||||||||||||||  |||||||||||||||    
T  39954327 taatttgagaaaatcacataatttagtgtaattatatgtg 39954288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 4611545 - 4611583
Alignment:
Q  1 taatttgagaaaatcacataattcggtgtaattatatgt 39  Q
    |||||||||||||| ||||||||| ||||||||||||||    
T  4611545 taatttgagaaaataacataattcagtgtaattatatgt 4611583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 7658474 - 7658516
Alignment:
Q  1 taatttgagaaaatcacataattcggtgtaattatatgtgtcg 43  Q
    |||||||||||||| ||||||||| |||||||||||| |||||    
T  7658474 taatttgagaaaattacataattcagtgtaattatatttgtcg 7658516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 11944676 - 11944718
Alignment:
Q  1 taatttgagaaaatcacataattcggtgtaattatatgtgtcg 43  Q
    |||||||| |||||||||||| || ||||||||||||||||||    
T  11944676 taatttgataaaatcacataactcagtgtaattatatgtgtcg 11944718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 12606877 - 12606835
Alignment:
Q  1 taatttgagaaaatcacataattcggtgtaattatatgtgtcg 43  Q
    |||||||||||||||| |||||||  |||||||||||||||||    
T  12606877 taatttgagaaaatcatataattcaatgtaattatatgtgtcg 12606835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 20679443 - 20679401
Alignment:
Q  1 taatttgagaaaatcacataattcggtgtaattatatgtgtcg 43  Q
    |||||||||||||||||||| ||| ||||||||||| ||||||    
T  20679443 taatttgagaaaatcacatagttcagtgtaattataagtgtcg 20679401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 27213558 - 27213600
Alignment:
Q  1 taatttgagaaaatcacataattcggtgtaattatatgtgtcg 43  Q
    |||||| |||||||||||||||||  |||||||||||||||||    
T  27213558 taatttcagaaaatcacataattcactgtaattatatgtgtcg 27213600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 33405432 - 33405390
Alignment:
Q  1 taatttgagaaaatcacataattcggtgtaattatatgtgtcg 43  Q
    ||||||||||||| |||||||||  ||||||||||||||||||    
T  33405432 taatttgagaaaaacacataatttagtgtaattatatgtgtcg 33405390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 40332202 - 40332244
Alignment:
Q  1 taatttgagaaaatcacataattcggtgtaattatatgtgtcg 43  Q
    |||||||||||||||||||||||| ||||||||| | ||||||    
T  40332202 taatttgagaaaatcacataattcagtgtaattacaagtgtcg 40332244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 11 - 43
Target Start/End: Original strand, 8847277 - 8847309
Alignment:
Q  11 aaatcacataattcggtgtaattatatgtgtcg 43  Q
    |||||||||||||| ||||||||||||||||||    
T  8847277 aaatcacataattcagtgtaattatatgtgtcg 8847309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 13203652 - 13203688
Alignment:
Q  1 taatttgagaaaatcacataattcggtgtaattatat 37  Q
    |||||||||||||| ||||||||| ||||||||||||    
T  13203652 taatttgagaaaattacataattcagtgtaattatat 13203688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 44067527 - 44067571
Alignment:
Q  1 taatttgagaaaatcacataattcggtgtaattatatgtgtcgtg 45  Q
    |||||||||||||| ||||||| | ||||||||||| ||||||||    
T  44067527 taatttgagaaaatgacataatacagtgtaattataagtgtcgtg 44067571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 30)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 8789598 - 8789556
Alignment:
Q  1 taatttgagaaaatcacataattcggtgtaattatatgtgtcg 43  Q
    |||||||||||||||||||||||| ||||||||||||||||||    
T  8789598 taatttgagaaaatcacataattccgtgtaattatatgtgtcg 8789556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 7928461 - 7928503
Alignment:
Q  1 taatttgagaaaatcacataattcggtgtaattatatgtgtcg 43  Q
    |||||||| ||||||||||||||| ||||||||||||||||||    
T  7928461 taatttgaaaaaatcacataattcagtgtaattatatgtgtcg 7928503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 26290382 - 26290423
Alignment:
Q  1 taatttgagaaaatcacataattcggtgtaattatatgtgtc 42  Q
    |||||||||||||||||||| |||||| ||||||||||||||    
T  26290382 taatttgagaaaatcacatagttcggtttaattatatgtgtc 26290423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 32804588 - 32804547
Alignment:
Q  1 taatttgagaaaatcacataattcggtgtaattatatgtgtc 42  Q
    |||||||||||||||||||||||  |||||||||||||||||    
T  32804588 taatttgagaaaatcacataatttagtgtaattatatgtgtc 32804547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 49505202 - 49505161
Alignment:
Q  1 taatttgagaaaatcacataattcggtgtaattatatgtgtc 42  Q
    |||||||||||||||||||||||  |||||||||||||||||    
T  49505202 taatttgagaaaatcacataatttagtgtaattatatgtgtc 49505161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 11313848 - 11313808
Alignment:
Q  1 taatttgagaaaatcacataattcggtgtaattatatgtgt 41  Q
    |||||||||||||||||||||||  ||||||||||||||||    
T  11313848 taatttgagaaaatcacataatttagtgtaattatatgtgt 11313808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 16192798 - 16192758
Alignment:
Q  1 taatttgagaaaatcacataattcggtgtaattatatgtgt 41  Q
    |||||||||||||| ||||||||| ||||||||||||||||    
T  16192798 taatttgagaaaataacataattcagtgtaattatatgtgt 16192758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 3 - 43
Target Start/End: Original strand, 25093515 - 25093555
Alignment:
Q  3 atttgagaaaatcacataattcggtgtaattatatgtgtcg 43  Q
    |||||||||||||||| ||||| ||||||||||||||||||    
T  25093515 atttgagaaaatcacacaattcagtgtaattatatgtgtcg 25093555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 34307828 - 34307784
Alignment:
Q  1 taatttgagaaaatcacataattcggtgtaattatatgtgtcgtg 45  Q
    |||||||||||||||||||| ||| ||||||||||| ||||||||    
T  34307828 taatttgagaaaatcacatatttcagtgtaattataagtgtcgtg 34307784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 8039883 - 8039841
Alignment:
Q  1 taatttgagaaaatcacataattcggtgtaattatatgtgtcg 43  Q
    |||||||||||||| | ||||||| ||||||||||||||||||    
T  8039883 taatttgagaaaattatataattcagtgtaattatatgtgtcg 8039841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 8383268 - 8383310
Alignment:
Q  1 taatttgagaaaatcacataattcggtgtaattatatgtgtcg 43  Q
    |||||||||||||||| ||||||| ||||||||||| ||||||    
T  8383268 taatttgagaaaatcatataattcagtgtaattataagtgtcg 8383310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 8930878 - 8930836
Alignment:
Q  1 taatttgagaaaatcacataattcggtgtaattatatgtgtcg 43  Q
    |||||| | |||||||||||||||| |||||||||||||||||    
T  8930878 taattttaaaaaatcacataattcgatgtaattatatgtgtcg 8930836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 10690310 - 10690268
Alignment:
Q  1 taatttgagaaaatcacataattcggtgtaattatatgtgtcg 43  Q
    |||| ||||||||||||||||||| |||||||||||| |||||    
T  10690310 taatctgagaaaatcacataattcagtgtaattatatttgtcg 10690268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 35
Target Start/End: Original strand, 11251989 - 11252023
Alignment:
Q  1 taatttgagaaaatcacataattcggtgtaattat 35  Q
    |||||||||||||||||||||||| ||||||||||    
T  11251989 taatttgagaaaatcacataattcagtgtaattat 11252023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 11658826 - 11658868
Alignment:
Q  1 taatttgagaaaatcacataattcggtgtaattatatgtgtcg 43  Q
    ||||||||||||||| |||||||| |||| |||||||||||||    
T  11658826 taatttgagaaaatcgcataattcagtgtgattatatgtgtcg 11658868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 12704018 - 12704056
Alignment:
Q  1 taatttgagaaaatcacataattcggtgtaattatatgt 39  Q
    ||||||||||||| |||||||||| ||||||||||||||    
T  12704018 taatttgagaaaagcacataattcagtgtaattatatgt 12704056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 18426960 - 18427002
Alignment:
Q  1 taatttgagaaaatcacataattcggtgtaattatatgtgtcg 43  Q
    |||||| | |||||||||||||||||||||||||||| |||||    
T  18426960 taatttcaaaaaatcacataattcggtgtaattatatatgtcg 18427002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 20691330 - 20691372
Alignment:
Q  1 taatttgagaaaatcacataattcggtgtaattatatgtgtcg 43  Q
    |||||||||||||| ||||||||| ||||||| ||||||||||    
T  20691330 taatttgagaaaatgacataattcagtgtaatcatatgtgtcg 20691372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 35
Target Start/End: Original strand, 24633777 - 24633811
Alignment:
Q  1 taatttgagaaaatcacataattcggtgtaattat 35  Q
    |||||||||||||||||||||||||||| ||||||    
T  24633777 taatttgagaaaatcacataattcggtgcaattat 24633811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 29508455 - 29508497
Alignment:
Q  1 taatttgagaaaatcacataattcggtgtaattatatgtgtcg 43  Q
    |||||||| ||||||| ||||||| ||||||||||||||||||    
T  29508455 taatttgaaaaaatcatataattcagtgtaattatatgtgtcg 29508497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 2 - 39
Target Start/End: Original strand, 1438816 - 1438853
Alignment:
Q  2 aatttgagaaaatcacataattcggtgtaattatatgt 39  Q
    ||||||||||||||||||||||| || |||||||||||    
T  1438816 aatttgagaaaatcacataattcagtataattatatgt 1438853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 9624652 - 9624689
Alignment:
Q  1 taatttgagaaaatcacataattcggtgtaattatatg 38  Q
    ||||||||||||||||||||||||  ||||||||||||    
T  9624652 taatttgagaaaatcacataattcaatgtaattatatg 9624689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 11493409 - 11493372
Alignment:
Q  1 taatttgagaaaatcacataattcggtgtaattatatg 38  Q
    |||| ||||||||||||||||||| |||||||||||||    
T  11493409 taatgtgagaaaatcacataattcagtgtaattatatg 11493372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 15812869 - 15812832
Alignment:
Q  1 taatttgagaaaatcacataattcggtgtaattatatg 38  Q
    ||||||||||||||||||||| || |||||||||||||    
T  15812869 taatttgagaaaatcacataactcagtgtaattatatg 15812832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 10 - 43
Target Start/End: Complemental strand, 40993374 - 40993341
Alignment:
Q  10 aaaatcacataattcggtgtaattatatgtgtcg 43  Q
    ||||||||||||||| ||||||||||||||||||    
T  40993374 aaaatcacataattcagtgtaattatatgtgtcg 40993341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 13620812 - 13620750
Alignment:
Q  1 taatttgagaaaatcacataattcggtgtaattatatgtgtc---gtgacgtgtccgacaccg 60  Q
    ||||||||||||||||||| |||| ||| | |||||||||||   || |||||||||||||||    
T  13620812 taatttgagaaaatcacatgattcagtgcagttatatgtgtctgtgtcacgtgtccgacaccg 13620750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 15314924 - 15314884
Alignment:
Q  1 taatttgagaaaatcacataattcggtgtaattatatgtgt 41  Q
    |||||||| ||||||||||||||  ||||||||||||||||    
T  15314924 taatttgaaaaaatcacataatttagtgtaattatatgtgt 15314884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 24205089 - 24205045
Alignment:
Q  1 taatttgagaaaatcacataattcggtgtaattatatgtgtcgtg 45  Q
    |||||||||||||| ||||||| | ||||||||||| ||||||||    
T  24205089 taatttgagaaaatgacataatacagtgtaattataagtgtcgtg 24205045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 25365473 - 25365517
Alignment:
Q  1 taatttgagaaaatcacataattcggtgtaattatatgtgtcgtg 45  Q
    ||||||||||| || ||||||||||||||||| ||| ||||||||    
T  25365473 taatttgagaatatgacataattcggtgtaatcataagtgtcgtg 25365517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 25948935 - 25948895
Alignment:
Q  1 taatttgagaaaatcacataattcggtgtaattatatgtgt 41  Q
    |||||||| ||||||||||||||| ||||||||||| ||||    
T  25948935 taatttgaaaaaatcacataattcagtgtaattataagtgt 25948895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 36)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 1864928 - 1864886
Alignment:
Q  1 taatttgagaaaatcacataattcggtgtaattatatgtgtcg 43  Q
    |||||||||||||||||||||||| ||||||||||||||||||    
T  1864928 taatttgagaaaatcacataattcagtgtaattatatgtgtcg 1864886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 9709831 - 9709873
Alignment:
Q  1 taatttgagaaaatcacataattcggtgtaattatatgtgtcg 43  Q
    ||||||||||||||||||||||||| |||||||||||||||||    
T  9709831 taatttgagaaaatcacataattcgttgtaattatatgtgtcg 9709873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 10572637 - 10572595
Alignment:
Q  1 taatttgagaaaatcacataattcggtgtaattatatgtgtcg 43  Q
    |||||||||||||||||||||||||||||||||| ||||||||    
T  10572637 taatttgagaaaatcacataattcggtgtaattaaatgtgtcg 10572595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 44482241 - 44482283
Alignment:
Q  1 taatttgagaaaatcacataattcggtgtaattatatgtgtcg 43  Q
    |||||||||||||||||||||||| ||||||||||||||||||    
T  44482241 taatttgagaaaatcacataattcagtgtaattatatgtgtcg 44482283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 7918259 - 7918218
Alignment:
Q  1 taatttgagaaaatcacataattcggtgtaattatatgtgtc 42  Q
    |||||||||||||||||||||||| |||||||||||||||||    
T  7918259 taatttgagaaaatcacataattcagtgtaattatatgtgtc 7918218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 25361897 - 25361938
Alignment:
Q  1 taatttgagaaaatcacataattcggtgtaattatatgtgtc 42  Q
    |||||||||||||||||||||||| |||||||||||||||||    
T  25361897 taatttgagaaaatcacataattcagtgtaattatatgtgtc 25361938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 20157398 - 20157338
Alignment:
Q  1 taatttgagaaaatcacataattcggtgtaattatatgtgtc-gtgacgtgtccgacaccg 60  Q
    |||| ||||||||||||||||||| ||||||| ||||||||| ||| ||||||||||||||    
T  20157398 taatgtgagaaaatcacataattcagtgtaatcatatgtgtcggtgtcgtgtccgacaccg 20157338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 25098603 - 25098563
Alignment:
Q  1 taatttgagaaaatcacataattcggtgtaattatatgtgt 41  Q
    |||||||||||||||||||||||| ||||||||||||||||    
T  25098603 taatttgagaaaatcacataattcagtgtaattatatgtgt 25098563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 19324573 - 19324612
Alignment:
Q  1 taatttgagaaaatcacataattcggtgtaattatatgtg 40  Q
    |||||||||||||||||||||||| |||||||||||||||    
T  19324573 taatttgagaaaatcacataattcagtgtaattatatgtg 19324612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 5 - 43
Target Start/End: Original strand, 34371728 - 34371766
Alignment:
Q  5 ttgagaaaatcacataattcggtgtaattatatgtgtcg 43  Q
    |||||||||||||||||||| ||||||||||||||||||    
T  34371728 ttgagaaaatcacataattcagtgtaattatatgtgtcg 34371766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 36878472 - 36878514
Alignment:
Q  1 taatttgagaaaatcacataattcggtgtaattatatgtgtcg 43  Q
    |||||||||||||||||||||||| ||||||||||| ||||||    
T  36878472 taatttgagaaaatcacataattcagtgtaattataggtgtcg 36878514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 40181882 - 40181920
Alignment:
Q  1 taatttgagaaaatcacataattcggtgtaattatatgt 39  Q
    |||||||||||||||||||||||| ||||||||||||||    
T  40181882 taatttgagaaaatcacataattcagtgtaattatatgt 40181920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 43492542 - 43492500
Alignment:
Q  1 taatttgagaaaatcacataattcggtgtaattatatgtgtcg 43  Q
    ||||||||||||||||| ||||||||||||||||| |||||||    
T  43492542 taatttgagaaaatcacgtaattcggtgtaattatgtgtgtcg 43492500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 5 - 42
Target Start/End: Original strand, 10233268 - 10233305
Alignment:
Q  5 ttgagaaaatcacataattcggtgtaattatatgtgtc 42  Q
    |||||||||||||||||||| |||||||||||||||||    
T  10233268 ttgagaaaatcacataattcagtgtaattatatgtgtc 10233305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 6427361 - 6427401
Alignment:
Q  1 taatttgagaaaatcacataattcggtgtaattatatgtgt 41  Q
    ||||||||||||||||||||||||  |||||||||||||||    
T  6427361 taatttgagaaaatcacataattcaatgtaattatatgtgt 6427401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 12443508 - 12443464
Alignment:
Q  1 taatttgagaaaatcacataattcggtgtaattatatgtgtcgtg 45  Q
    |||||||||||||||||||||||| |||||||| |||||| ||||    
T  12443508 taatttgagaaaatcacataattcagtgtaattgtatgtgacgtg 12443464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 9 - 45
Target Start/End: Complemental strand, 17705626 - 17705590
Alignment:
Q  9 gaaaatcacataattcggtgtaattatatgtgtcgtg 45  Q
    |||||||||||||||| ||||||||||||||||||||    
T  17705626 gaaaatcacataattcagtgtaattatatgtgtcgtg 17705590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 17831579 - 17831536
Alignment:
Q  1 taatttgagaaaatcacataattcggtgtaattatatgtgtcgt 44  Q
    ||||||||||||||||||| |||| ||||||| |||||||||||    
T  17831579 taatttgagaaaatcacattattcagtgtaatcatatgtgtcgt 17831536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 8 - 43
Target Start/End: Original strand, 30749858 - 30749893
Alignment:
Q  8 agaaaatcacataattcggtgtaattatatgtgtcg 43  Q
    ||||||||||||||||| ||||||||||||||||||    
T  30749858 agaaaatcacataattcagtgtaattatatgtgtcg 30749893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 8 - 43
Target Start/End: Original strand, 30771309 - 30771344
Alignment:
Q  8 agaaaatcacataattcggtgtaattatatgtgtcg 43  Q
    ||||||||||||||||| ||||||||||||||||||    
T  30771309 agaaaatcacataattcagtgtaattatatgtgtcg 30771344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 36
Target Start/End: Original strand, 34298447 - 34298482
Alignment:
Q  1 taatttgagaaaatcacataattcggtgtaattata 36  Q
    |||||||||||||||||||||||| |||||||||||    
T  34298447 taatttgagaaaatcacataattcagtgtaattata 34298482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 1486757 - 1486715
Alignment:
Q  1 taatttgagaaaatcacataattcggtgtaattatatgtgtcg 43  Q
    |||||||| ||||||||||||||| ||||||||||| ||||||    
T  1486757 taatttgaaaaaatcacataattcagtgtaattataagtgtcg 1486715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 9828055 - 9828097
Alignment:
Q  1 taatttgagaaaatcacataattcggtgtaattatatgtgtcg 43  Q
    |||||||| ||||||||||||||| |||||||| |||||||||    
T  9828055 taatttgataaaatcacataattcagtgtaattttatgtgtcg 9828097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 14332690 - 14332652
Alignment:
Q  1 taatttgagaaaatcacataattcggtgtaattatatgt 39  Q
    |||||||||||||||||||||||  ||||||||||||||    
T  14332690 taatttgagaaaatcacataatttagtgtaattatatgt 14332652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 31015054 - 31015096
Alignment:
Q  1 taatttgagaaaatcacataattcggtgtaattatatgtgtcg 43  Q
    |||||||||||||||||||||||| ||||||||| | ||||||    
T  31015054 taatttgagaaaatcacataattcagtgtaattacaagtgtcg 31015096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 34712431 - 34712373
Alignment:
Q  1 taatttgagaaaatcacataattcggtgtaattatatgtgtc-gtgacgtgtccgacac 58  Q
    |||||||||||||| ||||||||  ||||||||||||||||| ||| |||||| |||||    
T  34712431 taatttgagaaaataacataatttagtgtaattatatgtgtcagtgtcgtgtcggacac 34712373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 38503331 - 38503373
Alignment:
Q  1 taatttgagaaaatcacataattcggtgtaattatatgtgtcg 43  Q
    |||||||||||||||| ||| ||| ||||||||||||||||||    
T  38503331 taatttgagaaaatcatatatttcagtgtaattatatgtgtcg 38503373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 398813 - 398772
Alignment:
Q  1 taatttgagaaaatcacataattcggtgtaattatatgtgtc 42  Q
    |||||||| ||||||||||||||| ||||||||||| |||||    
T  398813 taatttgaaaaaatcacataattcagtgtaattataggtgtc 398772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 10 - 43
Target Start/End: Original strand, 13997903 - 13997936
Alignment:
Q  10 aaaatcacataattcggtgtaattatatgtgtcg 43  Q
    ||||||||||||||| ||||||||||||||||||    
T  13997903 aaaatcacataattcagtgtaattatatgtgtcg 13997936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 2 - 43
Target Start/End: Complemental strand, 23636096 - 23636055
Alignment:
Q  2 aatttgagaaaatcacataattcggtgtaattatatgtgtcg 43  Q
    ||||||||||||| ||||||||| |||||||| |||||||||    
T  23636096 aatttgagaaaattacataattcagtgtaattgtatgtgtcg 23636055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 2 - 43
Target Start/End: Original strand, 25272494 - 25272535
Alignment:
Q  2 aatttgagaaaatcacataattcggtgtaattatatgtgtcg 43  Q
    ||||||||||||||||||||||  ||||||||||| ||||||    
T  25272494 aatttgagaaaatcacataatttagtgtaattataagtgtcg 25272535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 13436469 - 13436509
Alignment:
Q  1 taatttgagaaaatcacataattcggtgtaattatatgtgt 41  Q
    |||||| || |||||||||||||| ||||||||||||||||    
T  13436469 taatttaaggaaatcacataattcagtgtaattatatgtgt 13436509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 17425141 - 17425101
Alignment:
Q  1 taatttgagaaaatcacataattcggtgtaattatatgtgt 41  Q
    |||||||| |||||||||||||||  |||||||||||||||    
T  17425141 taatttgataaaatcacataattcaatgtaattatatgtgt 17425101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 19562669 - 19562629
Alignment:
Q  1 taatttgagaaaatcacataattcggtgtaattatatgtgt 41  Q
    ||||||||||||||| |||| ||| ||||||||||||||||    
T  19562669 taatttgagaaaatctcatagttcagtgtaattatatgtgt 19562629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 27471614 - 27471574
Alignment:
Q  1 taatttgagaaaatcacataattcggtgtaattatatgtgt 41  Q
    ||||||||||||| |||||||||| ||||||||| ||||||    
T  27471614 taatttgagaaaagcacataattcagtgtaattacatgtgt 27471574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 36906008 - 36906048
Alignment:
Q  1 taatttgagaaaatcacataattcggtgtaattatatgtgt 41  Q
    |||| ||||||||||||||||||| | ||||||||||||||    
T  36906008 taatctgagaaaatcacataattcagagtaattatatgtgt 36906048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0123 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0123
Description:

Target: scaffold0123; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 2 - 43
Target Start/End: Complemental strand, 44572 - 44531
Alignment:
Q  2 aatttgagaaaatcacataattcggtgtaattatatgtgtcg 43  Q
    ||||||||||||||||||||||| ||||||||||||||||||    
T  44572 aatttgagaaaatcacataattcagtgtaattatatgtgtcg 44531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 37; Significance: 0.000000000005; HSPs: 31)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 3 - 43
Target Start/End: Complemental strand, 22602756 - 22602716
Alignment:
Q  3 atttgagaaaatcacataattcggtgtaattatatgtgtcg 43  Q
    |||||||||||||||||||||| ||||||||||||||||||    
T  22602756 atttgagaaaatcacataattcagtgtaattatatgtgtcg 22602716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 1433465 - 1433507
Alignment:
Q  1 taatttgagaaaatcacataattcggtgtaattatatgtgtcg 43  Q
    ||||||||||||||||||| ||| |||||||||||||||||||    
T  1433465 taatttgagaaaatcacatcatttggtgtaattatatgtgtcg 1433507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 5548687 - 5548745
Alignment:
Q  1 taatttgagaaaatcacataattcggtgtaattatatgtgtc-gtgacgtgtccgacac 58  Q
    |||||||||||||||| ||||||| ||||||||||||||||| ||| |||||| |||||    
T  5548687 taatttgagaaaatcaaataattcagtgtaattatatgtgtcagtgtcgtgtcggacac 5548745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 9482945 - 9482987
Alignment:
Q  1 taatttgagaaaatcacataattcggtgtaattatatgtgtcg 43  Q
    |||||||||||||||||| ||||| ||||||||||||||||||    
T  9482945 taatttgagaaaatcacacaattcagtgtaattatatgtgtcg 9482987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 20549802 - 20549844
Alignment:
Q  1 taatttgagaaaatcacataattcggtgtaattatatgtgtcg 43  Q
    ||||||||||||||||| |||||| ||||||||||||||||||    
T  20549802 taatttgagaaaatcacgtaattcagtgtaattatatgtgtcg 20549844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 17851442 - 17851483
Alignment:
Q  1 taatttgagaaaatcacataattcggtgtaattatatgtgtc 42  Q
    |||||| ||||||||||||||||| |||||||||||||||||    
T  17851442 taattttagaaaatcacataattcagtgtaattatatgtgtc 17851483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 22868053 - 22868094
Alignment:
Q  1 taatttgagaaaatcacataattcggtgtaattatatgtgtc 42  Q
    |||| ||||||||||||||||||| |||||||||||||||||    
T  22868053 taatatgagaaaatcacataattcagtgtaattatatgtgtc 22868094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 32308131 - 32308172
Alignment:
Q  1 taatttgagaaaatcacataattcggtgtaattatatgtgtc 42  Q
    |||||||||||||||||||||||| |||||||| ||||||||    
T  32308131 taatttgagaaaatcacataattcagtgtaattgtatgtgtc 32308172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 12278846 - 12278890
Alignment:
Q  1 taatttgagaaaatcacataattcggtgtaattatatgtgtcgtg 45  Q
    |||||| ||||||| ||||||||| ||||||||||||||||||||    
T  12278846 taatttaagaaaatgacataattcagtgtaattatatgtgtcgtg 12278890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 17307904 - 17307944
Alignment:
Q  1 taatttgagaaaatcacataattcggtgtaattatatgtgt 41  Q
    |||||||||||||| ||||||||| ||||||||||||||||    
T  17307904 taatttgagaaaataacataattcagtgtaattatatgtgt 17307944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 4 - 43
Target Start/End: Original strand, 5835261 - 5835300
Alignment:
Q  4 tttgagaaaatcacataattcggtgtaattatatgtgtcg 43  Q
    ||||||||||| ||||||||| ||||||||||||||||||    
T  5835261 tttgagaaaataacataattcagtgtaattatatgtgtcg 5835300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 16341507 - 16341546
Alignment:
Q  1 taatttgagaaaatcacataattcggtgtaattatatgtg 40  Q
    |||||||||||||||||||||||  |||||||||||||||    
T  16341507 taatttgagaaaatcacataattaagtgtaattatatgtg 16341546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 35
Target Start/End: Original strand, 2424625 - 2424659
Alignment:
Q  1 taatttgagaaaatcacataattcggtgtaattat 35  Q
    |||||||||||||||||||||||| ||||||||||    
T  2424625 taatttgagaaaatcacataattcagtgtaattat 2424659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 3721104 - 3721146
Alignment:
Q  1 taatttgagaaaatcacataattcggtgtaattatatgtgtcg 43  Q
    |||||||||||||||||||||||  || |||||||||||||||    
T  3721104 taatttgagaaaatcacataatttagtataattatatgtgtcg 3721146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 6630960 - 6630918
Alignment:
Q  1 taatttgagaaaatcacataattcggtgtaattatatgtgtcg 43  Q
    |||||||||||| |||| |||||| ||||||||||||||||||    
T  6630960 taatttgagaaagtcacttaattcagtgtaattatatgtgtcg 6630918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 7328739 - 7328697
Alignment:
Q  1 taatttgagaaaatcacataattcggtgtaattatatgtgtcg 43  Q
    |||||||||||||| ||||||||  ||||||||||||||||||    
T  7328739 taatttgagaaaataacataatttagtgtaattatatgtgtcg 7328697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 15902833 - 15902875
Alignment:
Q  1 taatttgagaaaatcacataattcggtgtaattatatgtgtcg 43  Q
    |||||||| ||||||||||||||  ||||||||||||||||||    
T  15902833 taatttgataaaatcacataatttagtgtaattatatgtgtcg 15902875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 18233646 - 18233604
Alignment:
Q  1 taatttgagaaaatcacataattcggtgtaattatatgtgtcg 43  Q
    |||||||||||||| ||||||||| ||||||||||| ||||||    
T  18233646 taatttgagaaaatgacataattcagtgtaattataggtgtcg 18233604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 19206061 - 19206103
Alignment:
Q  1 taatttgagaaaatcacataattcggtgtaattatatgtgtcg 43  Q
    ||||||||||||||||||||||||  | |||||||||||||||    
T  19206061 taatttgagaaaatcacataattcattataattatatgtgtcg 19206103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 19992012 - 19992054
Alignment:
Q  1 taatttgagaaaatcacataattcggtgtaattatatgtgtcg 43  Q
    |||||||||||||||||||| ||| ||||||||||| ||||||    
T  19992012 taatttgagaaaatcacatatttcagtgtaattataagtgtcg 19992054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 26329430 - 26329388
Alignment:
Q  1 taatttgagaaaatcacataattcggtgtaattatatgtgtcg 43  Q
    ||||||||||||| |||| ||||| ||||||||||||||||||    
T  26329430 taatttgagaaaaacacacaattcagtgtaattatatgtgtcg 26329388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 27732287 - 27732245
Alignment:
Q  1 taatttgagaaaatcacataattcggtgtaattatatgtgtcg 43  Q
    |||||| ||||||| ||||||||| ||||||||||||||||||    
T  27732287 taatttaagaaaattacataattcagtgtaattatatgtgtcg 27732245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 28155581 - 28155623
Alignment:
Q  1 taatttgagaaaatcacataattcggtgtaattatatgtgtcg 43  Q
    |||||||||||||| ||||||||||||||||||| | ||||||    
T  28155581 taatttgagaaaattacataattcggtgtaattacaagtgtcg 28155623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 35
Target Start/End: Complemental strand, 29787417 - 29787383
Alignment:
Q  1 taatttgagaaaatcacataattcggtgtaattat 35  Q
    |||||||||||||||||||||||| ||||||||||    
T  29787417 taatttgagaaaatcacataattcagtgtaattat 29787383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 11 - 43
Target Start/End: Original strand, 640134 - 640166
Alignment:
Q  11 aaatcacataattcggtgtaattatatgtgtcg 43  Q
    |||||||||||||| ||||||||||||||||||    
T  640134 aaatcacataattcagtgtaattatatgtgtcg 640166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 43
Target Start/End: Complemental strand, 3520388 - 3520348
Alignment:
Q  3 atttgagaaaatcacataattcggtgtaattatatgtgtcg 43  Q
    |||||||||||||| |||||||  |||||||||||||||||    
T  3520388 atttgagaaaatcatataattcaatgtaattatatgtgtcg 3520348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 5233640 - 5233680
Alignment:
Q  1 taatttgagaaaatcacataattcggtgtaattatatgtgt 41  Q
    ||||||||||||||||||||||   ||||||||||||||||    
T  5233640 taatttgagaaaatcacataatctagtgtaattatatgtgt 5233680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 8239098 - 8239054
Alignment:
Q  1 taatttgagaaaatcacataattcggtgtaattatatgtgtcgtg 45  Q
    |||||| ||||||||  ||||||| ||||||||||||||||||||    
T  8239098 taatttaagaaaatcttataattcagtgtaattatatgtgtcgtg 8239054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 30731048 - 30731080
Alignment:
Q  1 taatttgagaaaatcacataattcggtgtaatt 33  Q
    |||||||||||||||||||||||| ||||||||    
T  30731048 taatttgagaaaatcacataattcagtgtaatt 30731080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 35297720 - 35297680
Alignment:
Q  1 taatttgagaaaatcacataattcggtgtaattatatgtgt 41  Q
    ||||||||||||||||||||||||  | |||||||||||||    
T  35297720 taatttgagaaaatcacataattcattataattatatgtgt 35297680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 43250004 - 43250048
Alignment:
Q  1 taatttgagaaaatcacataattcggtgtaattatatgtgtcgtg 45  Q
    |||||||||||||| ||||||| | ||||||||||| ||||||||    
T  43250004 taatttgagaaaatgacataatacagtgtaattataagtgtcgtg 43250048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 37; Significance: 0.000000000005; HSPs: 25)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 6471937 - 6471897
Alignment:
Q  1 taatttgagaaaatcacataattcggtgtaattatatgtgt 41  Q
    |||||||||||||||||||||||| ||||||||||||||||    
T  6471937 taatttgagaaaatcacataattcagtgtaattatatgtgt 6471897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 3 - 43
Target Start/End: Complemental strand, 41091303 - 41091263
Alignment:
Q  3 atttgagaaaatcacataattcggtgtaattatatgtgtcg 43  Q
    |||||||||||||||||||||| ||||||||||||||||||    
T  41091303 atttgagaaaatcacataattcagtgtaattatatgtgtcg 41091263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 24273078 - 24273039
Alignment:
Q  1 taatttgagaaaatcacataattcggtgtaattatatgtg 40  Q
    |||||||||||||||||||||||| |||||||||||||||    
T  24273078 taatttgagaaaatcacataattcagtgtaattatatgtg 24273039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 24389136 - 24389175
Alignment:
Q  1 taatttgagaaaatcacataattcggtgtaattatatgtg 40  Q
    |||||||||||||||||||||||| |||||||||||||||    
T  24389136 taatttgagaaaatcacataattcagtgtaattatatgtg 24389175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 3966514 - 3966556
Alignment:
Q  1 taatttgagaaaatcacataattcggtgtaattatatgtgtcg 43  Q
    |||||||||||||||||| ||||| ||||||||||||||||||    
T  3966514 taatttgagaaaatcacacaattcagtgtaattatatgtgtcg 3966556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 18421889 - 18421847
Alignment:
Q  1 taatttgagaaaatcacataattcggtgtaattatatgtgtcg 43  Q
    |||||||||||||||||||||| | ||||||||||||||||||    
T  18421889 taatttgagaaaatcacataatccagtgtaattatatgtgtcg 18421847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 28588722 - 28588680
Alignment:
Q  1 taatttgagaaaatcacataattcggtgtaattatatgtgtcg 43  Q
    |||||||||||||||||||||||| ||||||||||| ||||||    
T  28588722 taatttgagaaaatcacataattcagtgtaattataggtgtcg 28588680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 30502436 - 30502394
Alignment:
Q  1 taatttgagaaaatcacataattcggtgtaattatatgtgtcg 43  Q
    ||||||||||||||||| |||||| ||||||||||||||||||    
T  30502436 taatttgagaaaatcacttaattcagtgtaattatatgtgtcg 30502394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 30542779 - 30542737
Alignment:
Q  1 taatttgagaaaatcacataattcggtgtaattatatgtgtcg 43  Q
    ||||||||||||||||| |||||| ||||||||||||||||||    
T  30542779 taatttgagaaaatcacttaattcagtgtaattatatgtgtcg 30542737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 39205891 - 39205949
Alignment:
Q  1 taatttgagaaaatcacataattcggtgtaattatatgtg-tcgtgacgtgtccgacac 58  Q
    |||||||||||||||| |||||| |||||||||||||||| | ||| ||||||||||||    
T  39205891 taatttgagaaaatcatataattaggtgtaattatatgtgttggtgtcgtgtccgacac 39205949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 5468026 - 5467982
Alignment:
Q  1 taatttgagaaaatcacataattcggtgtaattatatgtgtcgtg 45  Q
    |||||||| ||||||||||||||| ||||||||||| ||||||||    
T  5468026 taatttgataaaatcacataattcagtgtaattataggtgtcgtg 5467982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 3 - 43
Target Start/End: Complemental strand, 23016035 - 23015995
Alignment:
Q  3 atttgagaaaatcacataattcggtgtaattatatgtgtcg 43  Q
    |||||||||||||||||||||| ||||||||||| ||||||    
T  23016035 atttgagaaaatcacataattcagtgtaattataggtgtcg 23015995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 2436933 - 2436992
Alignment:
Q  1 taatttgagaaaatcacataattcggtgtaattatatgtgtc-gtgacgtgtccgacacc 59  Q
    |||||||  |||||||||||||||| ||| |||||||||||| ||| |||||||||||||    
T  2436933 taatttgcaaaaatcacataattcgttgtgattatatgtgtcggtgtcgtgtccgacacc 2436992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 8 - 43
Target Start/End: Original strand, 39758290 - 39758325
Alignment:
Q  8 agaaaatcacataattcggtgtaattatatgtgtcg 43  Q
    ||||||||||||||||| ||||||||||||||||||    
T  39758290 agaaaatcacataattcagtgtaattatatgtgtcg 39758325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 14873528 - 14873570
Alignment:
Q  1 taatttgagaaaatcacataattcggtgtaattatatgtgtcg 43  Q
    ||||||||||||| |||||||||  ||||||||||||||||||    
T  14873528 taatttgagaaaagcacataatttagtgtaattatatgtgtcg 14873570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 16203843 - 16203801
Alignment:
Q  1 taatttgagaaaatcacataattcggtgtaattatatgtgtcg 43  Q
    ||||||||||||||| |||||||  ||||||||||||||||||    
T  16203843 taatttgagaaaatctcataatttagtgtaattatatgtgtcg 16203801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 36838554 - 36838596
Alignment:
Q  1 taatttgagaaaatcacataattcggtgtaattatatgtgtcg 43  Q
    |||||||||||||| ||||||||  ||||||||||||||||||    
T  36838554 taatttgagaaaattacataatttagtgtaattatatgtgtcg 36838596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 7175067 - 7175026
Alignment:
Q  1 taatttgagaaaatcacataattcggtgtaattatatgtgtc 42  Q
    ||||||||||||||||||||||| ||  ||||||||||||||    
T  7175067 taatttgagaaaatcacataatttggcataattatatgtgtc 7175026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 27144474 - 27144515
Alignment:
Q  1 taatttgagaaaatcacataattcggtgtaattatatgtgtc 42  Q
    ||||||||| |||||||||||||  |||||||||||||||||    
T  27144474 taatttgaggaaatcacataatttagtgtaattatatgtgtc 27144515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 2 - 43
Target Start/End: Original strand, 34879362 - 34879403
Alignment:
Q  2 aatttgagaaaatcacataattcggtgtaattatatgtgtcg 43  Q
    ||||||||||||||| ||||||| ||||||| ||||||||||    
T  34879362 aatttgagaaaatcatataattcagtgtaataatatgtgtcg 34879403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 35017048 - 35017085
Alignment:
Q  1 taatttgagaaaatcacataattcggtgtaattatatg 38  Q
    |||||||||||||||||||||||  |||||||||||||    
T  35017048 taatttgagaaaatcacataatttagtgtaattatatg 35017085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 17593770 - 17593734
Alignment:
Q  1 taatttgagaaaatcacataattcggtgtaattatat 37  Q
    ||||||||||||||||| |||||| ||||||||||||    
T  17593770 taatttgagaaaatcacgtaattcagtgtaattatat 17593734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 19438354 - 19438386
Alignment:
Q  1 taatttgagaaaatcacataattcggtgtaatt 33  Q
    |||||||||||||||||||||||| ||||||||    
T  19438354 taatttgagaaaatcacataattcagtgtaatt 19438386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 25863215 - 25863259
Alignment:
Q  1 taatttgagaaaatcacataattcggtgtaattatatgtgtcgtg 45  Q
    |||||||||||||| | ||||||| ||||||||||| ||||||||    
T  25863215 taatttgagaaaatgatataattcagtgtaattataagtgtcgtg 25863259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 31264449 - 31264493
Alignment:
Q  1 taatttgagaaaatcacataattcggtgtaattatatgtgtcgtg 45  Q
    |||||||||||||| ||||||||| ||||||| ||| ||||||||    
T  31264449 taatttgagaaaatgacataattcagtgtaatcataagtgtcgtg 31264493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 37; Significance: 0.000000000005; HSPs: 24)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 21616773 - 21616813
Alignment:
Q  1 taatttgagaaaatcacataattcggtgtaattatatgtgt 41  Q
    |||||||||||||||||||||||| ||||||||||||||||    
T  21616773 taatttgagaaaatcacataattcagtgtaattatatgtgt 21616813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 4 - 43
Target Start/End: Original strand, 30471052 - 30471091
Alignment:
Q  4 tttgagaaaatcacataattcggtgtaattatatgtgtcg 43  Q
    |||||||||||||||||||||| |||||||||||||||||    
T  30471052 tttgagaaaatcacataattcgatgtaattatatgtgtcg 30471091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 5367203 - 5367245
Alignment:
Q  1 taatttgagaaaatcacataattcggtgtaattatatgtgtcg 43  Q
    ||||||||| |||||||||||||| ||||||||||||||||||    
T  5367203 taatttgaggaaatcacataattcagtgtaattatatgtgtcg 5367245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 23718037 - 23718079
Alignment:
Q  1 taatttgagaaaatcacataattcggtgtaattatatgtgtcg 43  Q
    |||||||||||| ||||||||||| ||||||||||||||||||    
T  23718037 taatttgagaaagtcacataattcagtgtaattatatgtgtcg 23718079  T

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Target: chr2; HSP #5
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 24105709 - 24105751
Alignment:
Q  1 taatttgagaaaatcacataattcggtgtaattatatgtgtcg 43  Q
    |||||||||||| ||||||||||| ||||||||||||||||||    
T  24105709 taatttgagaaagtcacataattcagtgtaattatatgtgtcg 24105751  T

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Target: chr2; HSP #6
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 37411292 - 37411250
Alignment:
Q  1 taatttgagaaaatcacataattcggtgtaattatatgtgtcg 43  Q
    |||||||||||||||||||||||| |||| |||||||||||||    
T  37411292 taatttgagaaaatcacataattcagtgtgattatatgtgtcg 37411250  T

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Target: chr2; HSP #7
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 44860331 - 44860373
Alignment:
Q  1 taatttgagaaaatcacataattcggtgtaattatatgtgtcg 43  Q
    ||||||||||||||| |||||||| ||||||||||||||||||    
T  44860331 taatttgagaaaatcgcataattcagtgtaattatatgtgtcg 44860373  T

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Target: chr2; HSP #8
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 35449524 - 35449565
Alignment:
Q  1 taatttgagaaaatcacataattcggtgtaattatatgtgtc 42  Q
    |||||||||||||||||| ||||| |||||||||||||||||    
T  35449524 taatttgagaaaatcacagaattcagtgtaattatatgtgtc 35449565  T

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Target: chr2; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 3 - 43
Target Start/End: Complemental strand, 38355933 - 38355893
Alignment:
Q  3 atttgagaaaatcacataattcggtgtaattatatgtgtcg 43  Q
    |||||||||||||||||||||| |||| |||||||||||||    
T  38355933 atttgagaaaatcacataattcagtgtgattatatgtgtcg 38355893  T

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Target: chr2; HSP #10
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 8 - 43
Target Start/End: Complemental strand, 20242768 - 20242733
Alignment:
Q  8 agaaaatcacataattcggtgtaattatatgtgtcg 43  Q
    ||||||||||||||||| ||||||||||||||||||    
T  20242768 agaaaatcacataattcagtgtaattatatgtgtcg 20242733  T

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Target: chr2; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 5473339 - 5473381
Alignment:
Q  1 taatttgagaaaatcacataattcggtgtaattatatgtgtcg 43  Q
    |||||||| |||||||||||||||||||||||  |||||||||    
T  5473339 taatttgaaaaaatcacataattcggtgtaatattatgtgtcg 5473381  T

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Target: chr2; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 18276532 - 18276574
Alignment:
Q  1 taatttgagaaaatcacataattcggtgtaattatatgtgtcg 43  Q
    ||||||||||||||||| |||||| |||||||||| |||||||    
T  18276532 taatttgagaaaatcacttaattcagtgtaattatgtgtgtcg 18276574  T

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Target: chr2; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 43
Target Start/End: Complemental strand, 18889635 - 18889597
Alignment:
Q  5 ttgagaaaatcacataattcggtgtaattatatgtgtcg 43  Q
    |||||||||||||||||||| ||||||| ||||||||||    
T  18889635 ttgagaaaatcacataattcagtgtaatcatatgtgtcg 18889597  T

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Target: chr2; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 35
Target Start/End: Complemental strand, 21782866 - 21782832
Alignment:
Q  1 taatttgagaaaatcacataattcggtgtaattat 35  Q
    |||||||||||||||||||||||| ||||||||||    
T  21782866 taatttgagaaaatcacataattcagtgtaattat 21782832  T

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Target: chr2; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 28677920 - 28677958
Alignment:
Q  1 taatttgagaaaatcacataattcggtgtaattatatgt 39  Q
    |||||||| ||||||||||||||| ||||||||||||||    
T  28677920 taatttgaaaaaatcacataattcagtgtaattatatgt 28677958  T

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Target: chr2; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 30527643 - 30527601
Alignment:
Q  1 taatttgagaaaatcacataattcggtgtaattatatgtgtcg 43  Q
    |||||||||||||||| ||||||  ||||||||||||||||||    
T  30527643 taatttgagaaaatcatataatttagtgtaattatatgtgtcg 30527601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 34691853 - 34691811
Alignment:
Q  1 taatttgagaaaatcacataattcggtgtaattatatgtgtcg 43  Q
    |||||||| ||||||| ||||||| ||||||||||||||||||    
T  34691853 taatttgataaaatcatataattcagtgtaattatatgtgtcg 34691811  T

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Target: chr2; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 34714265 - 34714223
Alignment:
Q  1 taatttgagaaaatcacataattcggtgtaattatatgtgtcg 43  Q
    |||||||| ||||||| ||||||| ||||||||||||||||||    
T  34714265 taatttgataaaatcatataattcagtgtaattatatgtgtcg 34714223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 39279686 - 39279728
Alignment:
Q  1 taatttgagaaaatcacataattcggtgtaattatatgtgtcg 43  Q
    |||| ||||||||||| ||||||| ||||||||||||||||||    
T  39279686 taatatgagaaaatcaaataattcagtgtaattatatgtgtcg 39279728  T

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Target: chr2; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 11 - 44
Target Start/End: Original strand, 28524447 - 28524480
Alignment:
Q  11 aaatcacataattcggtgtaattatatgtgtcgt 44  Q
    |||||||||||||| |||||||||||||||||||    
T  28524447 aaatcacataattcagtgtaattatatgtgtcgt 28524480  T

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Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 31808088 - 31808129
Alignment:
Q  1 taatttgagaaaatcacataattcggtgtaattatatgtgtc 42  Q
    |||||| | ||||||||||||||| |||||||||||||||||    
T  31808088 taatttaacaaaatcacataattcagtgtaattatatgtgtc 31808129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 10535807 - 10535763
Alignment:
Q  1 taatttgagaaaatcacataattcggtgtaattatatgtgtcgtg 45  Q
    |||||||||||||| ||||||||| ||||||| ||| ||||||||    
T  10535807 taatttgagaaaatgacataattcagtgtaatcataagtgtcgtg 10535763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 40
Target Start/End: Complemental strand, 15909677 - 15909641
Alignment:
Q  4 tttgagaaaatcacataattcggtgtaattatatgtg 40  Q
    ||||||||||| ||||||||| |||||||||||||||    
T  15909677 tttgagaaaattacataattcagtgtaattatatgtg 15909641  T

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Target: chr2; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 11 - 43
Target Start/End: Original strand, 41843462 - 41843494
Alignment:
Q  11 aaatcacataattcggtgtaattatatgtgtcg 43  Q
    ||||||||||||||||| |||||||||||||||    
T  41843462 aaatcacataattcggtataattatatgtgtcg 41843494  T

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Target: scaffold0168 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 21054 - 21096
Alignment:
Q  1 taatttgagaaaatcacataattcggtgtaattatatgtgtcg 43  Q
    ||||||||||||||||||||| ||||| |||||||||||||||    
T  21054 taatttgagaaaatcacataagtcggtataattatatgtgtcg 21096  T

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Target: scaffold0044 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 53191 - 53233
Alignment:
Q  1 taatttgagaaaatcacataattcggtgtaattatatgtgtcg 43  Q
    |||||||||||||||||||||||| ||||||||||| ||||||    
T  53191 taatttgagaaaatcacataattcagtgtaattataagtgtcg 53233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 9795 - 9753
Alignment:
Q  1 taatttgagaaaatcacataattcggtgtaattatatgtgtcg 43  Q
    ||||||||||||||||| |||||| ||||||||||||||||||    
T  9795 taatttgagaaaatcacttaattcagtgtaattatatgtgtcg 9753  T

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Target: scaffold0022 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 90854 - 90896
Alignment:
Q  1 taatttgagaaaatcacataattcggtgtaattatatgtgtcg 43  Q
    |||||||||||||||| ||||||| |||||||||||| |||||    
T  90854 taatttgagaaaatcatataattcagtgtaattatatatgtcg 90896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 192297 - 192264
Alignment:
Q  1 taatttgagaaaatcacataattcggtgtaatta 34  Q
    |||||||||||||| |||||||||||||||||||    
T  192297 taatttgagaaaattacataattcggtgtaatta 192264  T

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Target: scaffold0008 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 263420 - 263379
Alignment:
Q  1 taatttgagaaaatcacataattcggtgtaattatatgtgtc 42  Q
    ||||||||||||| |||||||||| ||||||||||| |||||    
T  263420 taatttgagaaaaccacataattcagtgtaattataagtgtc 263379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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