View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF15373_low_4 (Length: 392)

Name: NF15373_low_4
Description: NF15373
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF15373_low_4
NF15373_low_4
[»] chr1 (68 HSPs)
chr1 (11-374)||(47455218-47455581)
chr1 (148-348)||(47451194-47451394)
chr1 (146-348)||(19798980-19799182)
chr1 (146-348)||(23192785-23192986)
chr1 (146-348)||(51041430-51041630)
chr1 (146-348)||(39588334-39588536)
chr1 (146-348)||(33301147-33301349)
chr1 (146-348)||(40165906-40166108)
chr1 (146-348)||(16649580-16649781)
chr1 (146-348)||(26927689-26927891)
chr1 (146-348)||(10135382-10135584)
chr1 (11-148)||(10136999-10137136)
chr1 (146-348)||(16035528-16035736)
chr1 (201-343)||(3094045-3094187)
chr1 (216-348)||(25855097-25855229)
chr1 (144-343)||(38620624-38620822)
chr1 (146-348)||(10140015-10140217)
chr1 (11-148)||(25845430-25845567)
chr1 (177-346)||(18784547-18784716)
chr1 (145-291)||(12259979-12260125)
chr1 (237-348)||(16832027-16832138)
chr1 (265-348)||(25843738-25843821)
chr1 (177-299)||(8900229-8900351)
chr1 (146-292)||(11806341-11806487)
chr1 (178-284)||(2493817-2493923)
chr1 (178-278)||(10106100-10106199)
chr1 (179-263)||(12906166-12906248)
chr1 (179-278)||(38734272-38734370)
chr1 (146-244)||(8137969-8138067)
chr1 (32-148)||(11810583-11810696)
chr1 (179-284)||(27761839-27761944)
chr1 (164-285)||(5346652-5346773)
chr1 (162-263)||(33380905-33381004)
chr1 (144-232)||(16833526-16833614)
chr1 (179-278)||(13890810-13890908)
chr1 (179-278)||(39747165-39747263)
chr1 (146-208)||(25843822-25843884)
chr1 (179-275)||(5724979-5725074)
chr1 (179-275)||(36684715-36684810)
chr1 (162-284)||(24159783-24159904)
chr1 (179-278)||(26651166-26651264)
chr1 (179-284)||(36724698-36724803)
chr1 (179-275)||(3584601-3584696)
chr1 (179-275)||(11251113-11251208)
chr1 (179-275)||(34318224-34318319)
chr1 (179-275)||(37404416-37404511)
chr1 (179-278)||(5602425-5602523)
chr1 (182-284)||(4632929-4633031)
chr1 (178-263)||(23193222-23193306)
chr1 (179-275)||(5730105-5730200)
chr1 (151-239)||(25779288-25779376)
chr1 (179-275)||(37409537-37409632)
chr1 (179-278)||(14582096-14582194)
chr1 (240-278)||(8267891-8267929)
chr1 (239-284)||(19422937-19422982)
chr1 (234-275)||(27716443-27716484)
chr1 (149-286)||(28434544-28434680)
chr1 (299-348)||(46696596-46696645)
chr1 (179-263)||(31063968-31064050)
chr1 (181-243)||(28858065-28858126)
chr1 (234-275)||(11387884-11387925)
chr1 (299-348)||(12259911-12259959)
chr1 (215-256)||(25661858-25661899)
chr1 (166-263)||(32987252-32987347)
chr1 (83-148)||(37408526-37408591)
chr1 (245-278)||(41098017-41098050)
chr1 (304-348)||(8900162-8900206)
chr1 (299-347)||(28434705-28434753)
[»] scaffold0182 (1 HSPs)
scaffold0182 (146-348)||(9854-10056)
[»] chr5 (64 HSPs)
chr5 (146-348)||(29167940-29168142)
chr5 (146-348)||(556621-556823)
chr5 (146-348)||(561393-561595)
chr5 (148-348)||(41996591-41996791)
chr5 (148-348)||(42001360-42001560)
chr5 (146-348)||(12102950-12103153)
chr5 (146-348)||(26667198-26667400)
chr5 (146-348)||(26938795-26938997)
chr5 (146-343)||(36428640-36428837)
chr5 (146-348)||(12501866-12502069)
chr5 (146-325)||(36942232-36942411)
chr5 (146-348)||(39522974-39523177)
chr5 (146-348)||(6155386-6155588)
chr5 (146-348)||(39518336-39518538)
chr5 (146-348)||(12045106-12045309)
chr5 (146-325)||(36937478-36937657)
chr5 (162-351)||(37248778-37248967)
chr5 (146-346)||(36423565-36423765)
chr5 (149-348)||(7451684-7451883)
chr5 (146-348)||(41587127-41587329)
chr5 (146-349)||(3665856-3666060)
chr5 (151-348)||(10759792-10759992)
chr5 (144-348)||(6514566-6514769)
chr5 (176-348)||(37652827-37652999)
chr5 (149-341)||(40147828-40148020)
chr5 (146-343)||(11981247-11981443)
chr5 (11-148)||(26668951-26669088)
chr5 (11-148)||(26940548-26940685)
chr5 (146-348)||(20181030-20181233)
chr5 (146-348)||(12041899-12042101)
chr5 (162-348)||(35679858-35680047)
chr5 (11-148)||(558443-558580)
chr5 (11-148)||(41998389-41998526)
chr5 (146-344)||(32461516-32461702)
chr5 (11-136)||(36425326-36425451)
chr5 (11-148)||(36940474-36940611)
chr5 (11-148)||(39520059-39520196)
chr5 (149-294)||(12102801-12102946)
chr5 (146-292)||(16116216-16116362)
chr5 (183-291)||(15414885-15414993)
chr5 (266-348)||(37550089-37550170)
chr5 (148-209)||(4871987-4872048)
chr5 (179-275)||(13582690-13582785)
chr5 (179-275)||(24435869-24435964)
chr5 (179-278)||(7805068-7805166)
chr5 (179-278)||(14374132-14374230)
chr5 (179-275)||(36253826-36253921)
chr5 (146-299)||(9911128-9911280)
chr5 (176-229)||(37550029-37550082)
chr5 (179-275)||(17510058-17510153)
chr5 (146-279)||(13301454-13301585)
chr5 (162-263)||(18265489-18265588)
chr5 (178-275)||(24771356-24771452)
chr5 (302-346)||(12104205-12104249)
chr5 (179-275)||(42019573-42019668)
chr5 (178-284)||(1414050-1414155)
chr5 (234-275)||(26709102-26709143)
chr5 (234-275)||(26978836-26978877)
chr5 (179-275)||(17504953-17505048)
chr5 (239-275)||(41853548-41853584)
chr5 (234-284)||(24776869-24776919)
chr5 (178-259)||(1286265-1286344)
chr5 (299-344)||(9496714-9496759)
chr5 (245-278)||(31731540-31731573)
[»] scaffold0002 (2 HSPs)
scaffold0002 (146-350)||(3998-4202)
scaffold0002 (151-348)||(443917-444101)
[»] chr3 (78 HSPs)
chr3 (146-353)||(3672505-3672712)
chr3 (146-348)||(3692542-3692744)
chr3 (146-350)||(39775695-39775899)
chr3 (146-348)||(7571185-7571387)
chr3 (146-348)||(18467149-18467351)
chr3 (146-348)||(23666090-23666292)
chr3 (146-348)||(24038338-24038540)
chr3 (146-348)||(8069603-8069805)
chr3 (146-348)||(8883094-8883296)
chr3 (146-343)||(758335-758532)
chr3 (146-343)||(3033573-3033770)
chr3 (144-348)||(18471932-18472135)
chr3 (146-348)||(14438662-14438864)
chr3 (145-348)||(3418918-3419122)
chr3 (149-348)||(8887854-8888053)
chr3 (162-349)||(29350163-29350350)
chr3 (146-346)||(12965840-12966040)
chr3 (146-325)||(32474647-32474824)
chr3 (146-345)||(55431242-55431441)
chr3 (148-348)||(20519978-20520178)
chr3 (149-352)||(49971394-49971597)
chr3 (144-292)||(12971598-12971746)
chr3 (146-348)||(3657207-3657409)
chr3 (11-148)||(8884917-8885054)
chr3 (146-346)||(29715570-29715770)
chr3 (146-348)||(23661431-23661619)
chr3 (11-148)||(18468886-18469023)
chr3 (11-148)||(23664406-23664543)
chr3 (11-148)||(3674313-3674451)
chr3 (166-348)||(12112628-12112822)
chr3 (222-349)||(27708802-27708928)
chr3 (33-148)||(12970116-12970231)
chr3 (146-249)||(27708959-27709062)
chr3 (148-292)||(28125097-28125242)
chr3 (234-348)||(2207762-2207876)
chr3 (179-284)||(26962050-26962154)
chr3 (179-278)||(13022024-13022122)
chr3 (146-291)||(20507637-20507779)
chr3 (216-283)||(25726830-25726897)
chr3 (179-278)||(33089343-33089441)
chr3 (162-284)||(48432398-48432519)
chr3 (179-275)||(20090662-20090757)
chr3 (179-275)||(20095787-20095882)
chr3 (179-275)||(34129169-34129264)
chr3 (179-278)||(20810369-20810467)
chr3 (179-278)||(53119524-53119622)
chr3 (179-284)||(48435828-48435933)
chr3 (179-284)||(15768191-15768295)
chr3 (179-275)||(17364063-17364160)
chr3 (179-275)||(3476946-3477041)
chr3 (179-263)||(4662196-4662279)
chr3 (179-275)||(15763030-15763125)
chr3 (166-257)||(16013724-16013816)
chr3 (179-275)||(17368719-17368814)
chr3 (179-278)||(2617256-2617355)
chr3 (179-278)||(38436991-38437089)
chr3 (299-348)||(16013644-16013693)
chr3 (162-263)||(16983006-16983105)
chr3 (179-275)||(17357836-17357933)
chr3 (179-284)||(27605135-27605240)
chr3 (179-275)||(3482423-3482518)
chr3 (144-208)||(6596322-6596386)
chr3 (146-290)||(19276887-19277031)
chr3 (179-275)||(54270644-54270739)
chr3 (151-201)||(55325847-55325897)
chr3 (179-276)||(21494302-21494399)
chr3 (178-284)||(7806553-7806656)
chr3 (179-275)||(55128790-55128885)
chr3 (234-273)||(10321444-10321483)
chr3 (177-287)||(17026103-17026213)
chr3 (178-256)||(46964031-46964109)
chr3 (240-278)||(53358239-53358277)
chr3 (178-223)||(1741108-1741153)
chr3 (179-284)||(4117600-4117704)
chr3 (245-278)||(10586248-10586281)
chr3 (234-275)||(30341898-30341939)
chr3 (177-256)||(1641069-1641149)
chr3 (241-273)||(1688948-1688980)
[»] chr2 (56 HSPs)
chr2 (146-348)||(30650855-30651057)
chr2 (146-348)||(9189770-9189972)
chr2 (146-348)||(19892433-19892635)
chr2 (146-348)||(9180691-9180893)
chr2 (146-348)||(18344357-18344559)
chr2 (146-349)||(1934960-1935163)
chr2 (146-348)||(7737818-7738020)
chr2 (146-348)||(31326665-31326867)
chr2 (146-348)||(35601848-35602050)
chr2 (146-348)||(35638964-35639166)
chr2 (151-348)||(10160696-10160893)
chr2 (146-348)||(30658189-30658391)
chr2 (146-348)||(42926726-42926929)
chr2 (151-348)||(25478269-25478470)
chr2 (161-348)||(30631505-30631692)
chr2 (146-348)||(12796851-12797053)
chr2 (151-348)||(25497297-25497498)
chr2 (146-342)||(28603230-28603431)
chr2 (146-348)||(29677308-29677509)
chr2 (146-348)||(29677694-29677895)
chr2 (11-148)||(25483054-25483191)
chr2 (11-148)||(25490660-25490797)
chr2 (11-148)||(17973635-17973772)
chr2 (11-148)||(30652588-30652725)
chr2 (11-148)||(9183702-9183839)
chr2 (146-294)||(19094461-19094610)
chr2 (166-348)||(19578401-19578595)
chr2 (149-294)||(40847565-40847710)
chr2 (148-289)||(21523689-21523829)
chr2 (33-148)||(30647872-30647988)
chr2 (261-348)||(15489796-15489883)
chr2 (151-299)||(17545270-17545419)
chr2 (203-348)||(20711358-20711516)
chr2 (179-278)||(42914639-42914737)
chr2 (33-133)||(24536327-24536424)
chr2 (179-284)||(160031-160136)
chr2 (179-276)||(5089277-5089373)
chr2 (179-275)||(42723451-42723546)
chr2 (179-275)||(42728620-42728715)
chr2 (179-275)||(44096302-44096397)
chr2 (179-275)||(44754596-44754691)
chr2 (179-275)||(44759762-44759857)
chr2 (162-284)||(14104580-14104701)
chr2 (179-284)||(44957437-44957542)
chr2 (179-275)||(40518472-40518567)
chr2 (83-148)||(32080735-32080800)
chr2 (104-148)||(3175224-3175268)
chr2 (143-298)||(32079354-32079510)
chr2 (240-276)||(39542900-39542936)
chr2 (304-348)||(40847735-40847779)
chr2 (166-293)||(7734581-7734707)
chr2 (240-278)||(19538382-19538420)
chr2 (245-278)||(6297951-6297984)
chr2 (234-275)||(28751783-28751824)
chr2 (240-284)||(39542566-39542610)
chr2 (179-275)||(40392319-40392414)
[»] scaffold0352 (1 HSPs)
scaffold0352 (146-349)||(7029-7232)
[»] chr4 (91 HSPs)
chr4 (146-348)||(31273447-31273649)
chr4 (146-348)||(5271386-5271586)
chr4 (146-348)||(37259844-37260046)
chr4 (146-348)||(37264531-37264733)
chr4 (146-350)||(8693635-8693839)
chr4 (146-346)||(31268962-31269162)
chr4 (146-348)||(16420956-16421157)
chr4 (146-348)||(5928186-5928388)
chr4 (146-348)||(55251647-55251847)
chr4 (146-348)||(8030443-8030645)
chr4 (144-314)||(33463321-33463491)
chr4 (177-348)||(13521990-13522162)
chr4 (146-343)||(33468940-33469137)
chr4 (146-350)||(19101901-19102105)
chr4 (177-348)||(12823893-12824064)
chr4 (146-348)||(32082058-32082259)
chr4 (158-325)||(31765831-31766002)
chr4 (151-346)||(51697841-51698040)
chr4 (144-330)||(13059354-13059540)
chr4 (146-336)||(47244186-47244376)
chr4 (146-292)||(42758722-42758868)
chr4 (11-148)||(37262848-37262985)
chr4 (178-348)||(19106545-19106715)
chr4 (147-331)||(47574567-47574752)
chr4 (11-146)||(13061140-13061274)
chr4 (11-148)||(33467346-33467483)
chr4 (147-315)||(19906210-19906377)
chr4 (11-148)||(12876011-12876147)
chr4 (146-348)||(48276616-48276807)
chr4 (245-348)||(32221163-32221266)
chr4 (146-348)||(31729354-31729540)
chr4 (144-287)||(19541126-19541269)
chr4 (204-342)||(51696931-51697072)
chr4 (33-148)||(7899184-7899300)
chr4 (33-144)||(19103653-19103764)
chr4 (162-291)||(12878222-12878351)
chr4 (189-299)||(13065778-13065888)
chr4 (177-292)||(2819826-2819941)
chr4 (146-292)||(4550980-4551125)
chr4 (149-291)||(12874522-12874664)
chr4 (168-292)||(1151286-1151411)
chr4 (33-148)||(8028637-8028753)
chr4 (146-300)||(32545068-32545223)
chr4 (35-148)||(12316282-12316395)
chr4 (179-275)||(653043-653138)
chr4 (181-284)||(10120811-10120913)
chr4 (176-252)||(16953107-16953183)
chr4 (149-285)||(16947994-16948126)
chr4 (289-347)||(55810257-55810315)
chr4 (178-263)||(16595933-16596017)
chr4 (178-263)||(20513118-20513202)
chr4 (179-275)||(36354176-36354271)
chr4 (179-275)||(36359294-36359389)
chr4 (179-275)||(39999069-39999164)
chr4 (179-275)||(40004027-40004122)
chr4 (179-275)||(53797629-53797724)
chr4 (179-275)||(54343203-54343298)
chr4 (179-275)||(54348357-54348452)
chr4 (162-284)||(33722904-33723025)
chr4 (166-263)||(15020454-15020549)
chr4 (213-282)||(52691089-52691158)
chr4 (214-290)||(6070571-6070647)
chr4 (179-275)||(8980285-8980380)
chr4 (179-275)||(8985405-8985500)
chr4 (179-275)||(13700510-13700605)
chr4 (179-275)||(21299833-21299928)
chr4 (179-275)||(41393245-41393340)
chr4 (179-275)||(51019373-51019468)
chr4 (179-275)||(54991486-54991581)
chr4 (179-278)||(24490028-24490127)
chr4 (166-276)||(40408196-40408307)
chr4 (179-275)||(13695159-13695254)
chr4 (179-275)||(21304953-21305048)
chr4 (179-275)||(47046307-47046402)
chr4 (299-342)||(23093112-23093155)
chr4 (179-273)||(8083027-8083121)
chr4 (300-348)||(8652129-8652178)
chr4 (300-348)||(8663936-8663985)
chr4 (83-148)||(17681452-17681517)
chr4 (179-275)||(13710669-13710763)
chr4 (149-192)||(8649600-8649643)
chr4 (149-192)||(8661407-8661450)
chr4 (239-278)||(10318839-10318878)
chr4 (215-269)||(30564450-30564504)
chr4 (165-292)||(39217367-39217490)
chr4 (240-278)||(39319628-39319666)
chr4 (299-348)||(12878153-12878202)
chr4 (83-148)||(13687776-13687841)
chr4 (245-278)||(34560494-34560527)
chr4 (239-296)||(34644536-34644593)
chr4 (246-278)||(3998123-3998155)
[»] chr8 (71 HSPs)
chr8 (151-351)||(33416470-33416670)
chr8 (146-348)||(31449833-31450035)
chr8 (146-348)||(17025861-17026063)
chr8 (146-348)||(17556353-17556555)
chr8 (146-348)||(18876334-18876535)
chr8 (151-351)||(44925895-44926095)
chr8 (146-348)||(34118392-34118594)
chr8 (146-348)||(38182204-38182405)
chr8 (146-348)||(1910936-1911138)
chr8 (146-348)||(1807398-1807601)
chr8 (146-293)||(40125852-40125999)
chr8 (215-348)||(40130722-40130855)
chr8 (146-346)||(28559621-28559821)
chr8 (201-343)||(4238337-4238479)
chr8 (146-300)||(19166608-19166762)
chr8 (11-148)||(4241290-4241427)
chr8 (201-343)||(4243076-4243218)
chr8 (11-148)||(17021934-17022071)
chr8 (146-292)||(15875635-15875781)
chr8 (11-148)||(17552371-17552508)
chr8 (146-294)||(17953839-17953988)
chr8 (146-302)||(36683551-36683707)
chr8 (151-299)||(24090602-24090750)
chr8 (146-348)||(2965545-2965758)
chr8 (33-148)||(21960132-21960248)
chr8 (144-299)||(23548597-23548752)
chr8 (173-348)||(43302712-43302880)
chr8 (33-148)||(8329608-8329724)
chr8 (169-306)||(2355449-2355586)
chr8 (266-348)||(19915073-19915155)
chr8 (149-276)||(7902561-7902688)
chr8 (146-285)||(28564786-28564927)
chr8 (146-285)||(28572409-28572550)
chr8 (11-148)||(28861286-28861421)
chr8 (179-276)||(33616727-33616823)
chr8 (179-278)||(19430011-19430109)
chr8 (179-278)||(19435513-19435611)
chr8 (179-278)||(19566160-19566258)
chr8 (179-278)||(19571662-19571760)
chr8 (179-278)||(31030525-31030623)
chr8 (179-294)||(29220246-29220359)
chr8 (179-275)||(32015700-32015795)
chr8 (143-277)||(17793450-17793584)
chr8 (178-263)||(2469986-2470070)
chr8 (162-284)||(4544235-4544356)
chr8 (198-284)||(19954262-19954348)
chr8 (146-232)||(10933474-10933559)
chr8 (179-284)||(13584341-13584453)
chr8 (179-284)||(19949808-19949913)
chr8 (170-292)||(24673316-24673438)
chr8 (146-243)||(12820370-12820467)
chr8 (179-275)||(17955789-17955884)
chr8 (146-209)||(15951523-15951585)
chr8 (169-263)||(20072109-20072200)
chr8 (214-295)||(5883978-5884058)
chr8 (179-271)||(21644081-21644172)
chr8 (178-278)||(42157871-42157970)
chr8 (179-275)||(42514374-42514469)
chr8 (146-202)||(43302658-43302714)
chr8 (162-253)||(34517263-34517351)
chr8 (242-276)||(15951584-15951618)
chr8 (181-275)||(24884712-24884805)
chr8 (145-246)||(27415539-27415640)
chr8 (179-284)||(43999230-43999334)
chr8 (278-340)||(28565268-28565330)
chr8 (278-340)||(28572891-28572953)
chr8 (245-283)||(34818764-34818802)
chr8 (245-283)||(37771703-37771741)
chr8 (234-275)||(32010538-32010579)
chr8 (312-348)||(15951623-15951659)
chr8 (316-348)||(40126000-40126032)
[»] chr7 (59 HSPs)
chr7 (146-343)||(4930164-4930361)
chr7 (146-348)||(8268219-8268421)
chr7 (149-337)||(26341136-26341324)
chr7 (148-348)||(8075975-8076176)
chr7 (146-346)||(13314203-13314403)
chr7 (177-348)||(9650965-9651137)
chr7 (146-348)||(44423104-44423307)
chr7 (146-292)||(4579490-4579636)
chr7 (146-325)||(44510644-44510823)
chr7 (16-148)||(12802955-12803087)
chr7 (148-294)||(23246902-23247048)
chr7 (146-277)||(23866065-23866196)
chr7 (146-351)||(27238164-27238370)
chr7 (196-345)||(42627214-42627364)
chr7 (146-348)||(10388334-10388546)
chr7 (146-292)||(25543329-25543475)
chr7 (216-348)||(30256780-30256912)
chr7 (181-299)||(3357634-3357752)
chr7 (151-292)||(12254061-12254202)
chr7 (146-348)||(21671109-21671323)
chr7 (146-290)||(9008147-9008291)
chr7 (146-348)||(3879922-3880123)
chr7 (164-294)||(29150914-29151044)
chr7 (146-348)||(26287112-26287339)
chr7 (177-291)||(16372381-16372491)
chr7 (179-278)||(24528351-24528449)
chr7 (35-144)||(2596444-2596553)
chr7 (144-229)||(12799455-12799540)
chr7 (146-299)||(15642209-15642362)
chr7 (144-250)||(6590948-6591054)
chr7 (178-278)||(9973459-9973558)
chr7 (179-275)||(33238002-33238097)
chr7 (179-275)||(47998975-47999070)
chr7 (200-261)||(29478176-29478236)
chr7 (179-275)||(2234630-2234725)
chr7 (179-275)||(16539412-16539507)
chr7 (179-275)||(16626155-16626250)
chr7 (179-275)||(32212654-32212749)
chr7 (179-275)||(33243179-33243274)
chr7 (179-275)||(42571945-42572040)
chr7 (179-275)||(47993800-47993895)
chr7 (146-208)||(30258166-30258228)
chr7 (179-273)||(33226416-33226509)
chr7 (33-148)||(10391404-10391516)
chr7 (162-251)||(13142884-13142973)
chr7 (179-275)||(21081039-21081136)
chr7 (182-278)||(28292506-28292600)
chr7 (179-275)||(47177119-47177214)
chr7 (182-284)||(6898359-6898461)
chr7 (181-261)||(3284740-3284820)
chr7 (179-275)||(12934397-12934492)
chr7 (179-275)||(17495403-17495498)
chr7 (179-275)||(17557716-17557811)
chr7 (179-275)||(43892858-43892953)
chr7 (180-263)||(1289334-1289416)
chr7 (106-148)||(15976804-15976846)
chr7 (234-275)||(22857741-22857782)
chr7 (245-278)||(27256239-27256272)
chr7 (240-296)||(7875158-7875214)
[»] chr6 (66 HSPs)
chr6 (146-353)||(2700073-2700281)
chr6 (149-348)||(6407830-6408029)
chr6 (149-346)||(12688899-12689096)
chr6 (149-336)||(11570719-11570906)
chr6 (146-348)||(8747708-8747910)
chr6 (144-349)||(33687568-33687773)
chr6 (146-348)||(21308960-21309159)
chr6 (11-148)||(16834446-16834583)
chr6 (202-349)||(19674238-19674385)
chr6 (144-325)||(14508933-14509114)
chr6 (144-292)||(24589129-24589277)
chr6 (237-349)||(11534736-11534848)
chr6 (237-349)||(11560246-11560358)
chr6 (144-292)||(29892226-29892374)
chr6 (210-342)||(11427975-11428108)
chr6 (146-294)||(12406320-12406468)
chr6 (146-290)||(20748251-20748395)
chr6 (151-348)||(25316535-25316739)
chr6 (151-348)||(26204029-26204233)
chr6 (146-294)||(13736645-13736793)
chr6 (146-292)||(11614059-11614205)
chr6 (162-254)||(16836139-16836231)
chr6 (146-254)||(17964526-17964634)
chr6 (15-147)||(12797060-12797191)
chr6 (144-288)||(22695236-22695380)
chr6 (283-345)||(17964634-17964696)
chr6 (179-278)||(19478145-19478243)
chr6 (181-278)||(3901909-3902006)
chr6 (146-292)||(22609556-22609696)
chr6 (179-279)||(12183000-12183100)
chr6 (179-278)||(13605092-13605190)
chr6 (198-263)||(35129640-35129704)
chr6 (179-275)||(22698243-22698338)
chr6 (179-275)||(31981560-31981655)
chr6 (179-275)||(34142080-34142175)
chr6 (179-275)||(34154696-34154791)
chr6 (144-203)||(11534676-11534735)
chr6 (144-203)||(11560186-11560245)
chr6 (164-351)||(2760240-2760427)
chr6 (166-255)||(32815051-32815138)
chr6 (179-279)||(5600972-5601072)
chr6 (146-290)||(9751775-9751920)
chr6 (179-278)||(10642706-10642805)
chr6 (33-146)||(19992718-19992828)
chr6 (245-291)||(2882821-2882867)
chr6 (179-275)||(21396699-21396794)
chr6 (179-275)||(24192480-24192575)
chr6 (179-275)||(29491237-29491332)
chr6 (179-275)||(34375919-34376014)
chr6 (245-291)||(2863518-2863564)
chr6 (240-278)||(11956762-11956800)
chr6 (151-277)||(12851809-12851937)
chr6 (234-275)||(21401755-21401796)
chr6 (299-348)||(22609481-22609530)
chr6 (234-275)||(24191437-24191478)
chr6 (217-263)||(14041703-14041749)
chr6 (146-223)||(4157336-4157413)
chr6 (242-275)||(6728397-6728430)
chr6 (302-343)||(13736814-13736855)
chr6 (299-348)||(15991829-15991878)
chr6 (299-348)||(15999491-15999540)
chr6 (106-147)||(22693832-22693873)
chr6 (178-235)||(31990898-31990955)
chr6 (307-347)||(12406491-12406531)
chr6 (234-278)||(17281618-17281662)
chr6 (149-213)||(19995373-19995437)
[»] scaffold0012 (1 HSPs)
scaffold0012 (146-349)||(166053-166257)
[»] scaffold0054 (2 HSPs)
scaffold0054 (149-348)||(25325-25524)
scaffold0054 (144-221)||(29209-29285)
[»] scaffold0057 (1 HSPs)
scaffold0057 (146-348)||(35560-35762)
[»] scaffold0045 (1 HSPs)
scaffold0045 (146-348)||(82991-83194)
[»] scaffold0061 (1 HSPs)
scaffold0061 (33-148)||(48187-48303)
[»] scaffold0017 (1 HSPs)
scaffold0017 (33-148)||(150330-150446)
[»] scaffold0015 (1 HSPs)
scaffold0015 (33-148)||(212600-212716)
[»] scaffold0240 (1 HSPs)
scaffold0240 (168-299)||(3966-4097)
[»] scaffold2020 (1 HSPs)
scaffold2020 (162-349)||(282-483)
[»] scaffold0009 (1 HSPs)
scaffold0009 (162-349)||(165012-165213)
[»] scaffold0008 (1 HSPs)
scaffold0008 (146-287)||(255804-255945)
[»] scaffold0060 (2 HSPs)
scaffold0060 (33-145)||(51146-51255)
scaffold0060 (179-284)||(37001-37105)
[»] scaffold0070 (2 HSPs)
scaffold0070 (47-148)||(60155-60256)
scaffold0070 (47-148)||(64357-64458)
[»] scaffold0108 (1 HSPs)
scaffold0108 (33-148)||(21482-21597)
[»] scaffold0184 (1 HSPs)
scaffold0184 (146-292)||(2291-2436)
[»] scaffold0018 (1 HSPs)
scaffold0018 (162-284)||(171700-171820)
[»] scaffold0097 (1 HSPs)
scaffold0097 (203-348)||(15197-15355)
[»] scaffold0132 (2 HSPs)
scaffold0132 (179-278)||(2772-2870)
scaffold0132 (179-278)||(10732-10830)
[»] scaffold0011 (4 HSPs)
scaffold0011 (179-278)||(1562-1660)
scaffold0011 (179-278)||(7043-7141)
scaffold0011 (147-205)||(155486-155544)
scaffold0011 (236-271)||(155552-155587)
[»] scaffold0128 (1 HSPs)
scaffold0128 (149-281)||(13265-13397)
[»] scaffold0055 (1 HSPs)
scaffold0055 (179-275)||(3058-3153)
[»] scaffold0052 (1 HSPs)
scaffold0052 (179-275)||(81382-81477)
[»] scaffold0690 (1 HSPs)
scaffold0690 (33-148)||(6854-6966)
[»] scaffold0594 (1 HSPs)
scaffold0594 (179-275)||(9208-9303)
[»] scaffold0166 (2 HSPs)
scaffold0166 (179-275)||(13740-13835)
scaffold0166 (234-284)||(19252-19302)
[»] scaffold0067 (1 HSPs)
scaffold0067 (234-278)||(34023-34067)
[»] scaffold0014 (2 HSPs)
scaffold0014 (179-275)||(31545-31640)
scaffold0014 (179-275)||(26373-26468)
[»] scaffold0517 (1 HSPs)
scaffold0517 (179-275)||(3563-3658)
[»] scaffold1050 (1 HSPs)
scaffold1050 (146-263)||(1151-1268)
[»] scaffold0020 (1 HSPs)
scaffold0020 (245-283)||(1291-1329)


Alignment Details
Target: chr1 (Bit Score: 344; Significance: 0; HSPs: 68)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 344; E-Value: 0
Query Start/End: Original strand, 11 - 374
Target Start/End: Original strand, 47455218 - 47455581
Alignment:
Q  11 cacagaataattagagagctctaaaaggaacggttaaagtatatcgtgcacgtactgataaagaattattcaatcctttgacgaaaggaattactagaaa 110  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  47455218 cacagaataattagagagctctaaaaggaacggttaaagtatatcgtgcacgtactgataaagaattattcaatcctttgacgaaaggaattactagaaa 47455317  T
Q  111 gaaagtcataaacacatccaataggatgtgactaatgcagtagttaatcgaacagttgtagttgggcttgttttatcctggaggcggcgtggttgataat 210  Q
     |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||    
T  47455318 aaaagtcataaacacatccaataggatgtgactaatgcagtagttaatcgaacagttgtagctaggcttgttttatcctggaggcggcgtggttgataat 47455417  T
Q  211 ctgtcttgcacaattttgggcattgccacgaaacgtcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtggataatagaatttgg 310  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  47455418 ctgtcttgcacaattttggacattgccacgaaacgtcttaaagagagcgacctggtcgtgactcaacctaataacaacttcggtggataatagaatttgg 47455517  T
Q  311 aaatccaaatacaactgtttggaaatccaaaaacaacagaacttgaatcatgtatgccattgct 374  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  47455518 aaatccaaatacaactgtttggaaatccaaaaacaacagaacttgaatcatgtatgccattgct 47455581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 169; E-Value: 2e-90
Query Start/End: Original strand, 148 - 348
Target Start/End: Original strand, 47451194 - 47451394
Alignment:
Q  148 cagtagttaatcgaacagttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtc 247  Q
    ||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||| |||||||||||||||||| |||| ||||| ||||||||    
T  47451194 cagtagttaatcgaacagttgtagttgagcttgttttatcttggaggcggcgtggttgatagtctgtcttgcacaatttttggcagtgccatgaaacgtc 47451293  T
Q  248 ttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtggataatagaatttggaaatccaaatacaactgtttggaaatccaaaaacaac 347  Q
    ||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  47451294 ttaaagagagcgacctggtcgtgactcaacctagtaataatttcggtggataatagaatttggaaatccaaatacaactgtttggaaatccaaaaacaac 47451393  T
Q  348 a 348  Q
    |    
T  47451394 a 47451394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 146 - 348
Target Start/End: Original strand, 19798980 - 19799182
Alignment:
Q  146 tgcagtagttaatcgaacagttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacg 245  Q
    |||||||||||| || |||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||  | ||||||||||||    
T  19798980 tgcagtagttaaccgcacagttgtagctgggcttgttttatcctggaggcggcgtggttgatagtctgtcttgcacaattttggatagtgccacgaaacg 19799079  T
Q  246 tcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtggataatagaatttggaaatccaaatacaactgtttggaaatccaaaaaca 345  Q
    ||||||||||||||| ||| ||||||||||||||||||||||||||| | |||||||||||||| ||||||||||||||| ||||| |||||||||||||    
T  19799080 tcttaaagagagcgatctgatcgtgactcaacctagtaacaacttcgatagataatagaatttgaaaatccaaatacaacagtttgaaaatccaaaaaca 19799179  T
Q  346 aca 348  Q
    |||    
T  19799180 aca 19799182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 146 - 348
Target Start/End: Original strand, 23192785 - 23192986
Alignment:
Q  146 tgcagtagttaatcgaacagttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacg 245  Q
    ||||||||||||||||||| |||||| ||| |||||||||||||||||| ||||||||||||| |||| |||| ||||||||||||| ||||||||||||    
T  23192785 tgcagtagttaatcgaacaattgtagctgg-cttgttttatcctggaggaggcgtggttgatagtctgccttgtacaattttgggcagtgccacgaaacg 23192883  T
Q  246 tcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtggataatagaatttggaaatccaaatacaactgtttggaaatccaaaaaca 345  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||| ||||| ||||| |||||||||||||    
T  23192884 tcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtagataatagaatttggaaaaccaaacacaacagtttgaaaatccaaaaaca 23192983  T
Q  346 aca 348  Q
    |||    
T  23192984 aca 23192986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 146 - 348
Target Start/End: Original strand, 51041430 - 51041630
Alignment:
Q  146 tgcagtagttaatcgaacagttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacg 245  Q
    ||||||| |||||||||||||||||| ||||||||||||||| |||||||||||||||||||| |||| |||||||||||| ||||| ||||||||||||    
T  51041430 tgcagtaattaatcgaacagttgtagctgggcttgttttatcttggaggcggcgtggttgatagtctgccttgcacaattt-gggcagtgccacgaaacg 51041528  T
Q  246 tcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtggataatagaatttggaaatccaaatacaactgtttggaaatccaaaaaca 345  Q
    ||||||| |||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||| | |||||||||||||||||||    
T  51041529 tcttaaa-agagcgacctggtcgtgactcaacttagtaacaacttcggtagataatagaatttggaaatccaaatacatcagtttggaaatccaaaaaca 51041627  T
Q  346 aca 348  Q
    |||    
T  51041628 aca 51041630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 143; E-Value: 5e-75
Query Start/End: Original strand, 146 - 348
Target Start/End: Original strand, 39588334 - 39588536
Alignment:
Q  146 tgcagtagttaatcgaacagttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacg 245  Q
    ||||||||||||||||||| |||||| || ||||| ||||||||||||  |||||||| |||| |||||||||||||||||||| || ||||||||||||    
T  39588334 tgcagtagttaatcgaacaattgtagatgagcttgctttatcctggagtaggcgtggtagatagtctgtcttgcacaattttggacagtgccacgaaacg 39588433  T
Q  246 tcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtggataatagaatttggaaatccaaatacaactgtttggaaatccaaaaaca 345  Q
    ||||||||||||||||||| |||||||| ||||||||||||| |||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||    
T  39588434 tcttaaagagagcgacctgatcgtgacttaacctagtaacaatttcggtggataatataatttggaaatccaaatacaactatttggaaatccaaaaaca 39588533  T
Q  346 aca 348  Q
    |||    
T  39588534 aca 39588536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 146 - 348
Target Start/End: Original strand, 33301147 - 33301349
Alignment:
Q  146 tgcagtagttaatcgaacagttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacg 245  Q
    |||||||||||| || |||||||||| ||   ||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||    
T  33301147 tgcagtagttaaccgcacagttgtagatgaaattgttttatcctggaggcggcgtggttgatagtctgtcttgcacaattttgggcagtgccacgaaacg 33301246  T
Q  246 tcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtggataatagaatttggaaatccaaatacaactgtttggaaatccaaaaaca 345  Q
    ||||||||||| |||||||||||||| |||| ||||||||||||| | | |||||||||||||||||||||||||||||| | |||||||||||||||||    
T  33301247 tcttaaagagaacgacctggtcgtgattcaagctagtaacaactttgatagataatagaatttggaaatccaaatacaacagattggaaatccaaaaaca 33301346  T
Q  346 aca 348  Q
    |||    
T  33301347 aca 33301349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 146 - 348
Target Start/End: Complemental strand, 40166108 - 40165906
Alignment:
Q  146 tgcagtagttaatcgaacagttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacg 245  Q
    ||||||||||||||| | ||||||||||| |||||||||||||| |||||||||| |||| || |||| |||||||||||||||||| ||||||||||||    
T  40166108 tgcagtagttaatcgtatagttgtagttgtgcttgttttatcctagaggcggcgttgttgttagtctgccttgcacaattttgggcagtgccacgaaacg 40166009  T
Q  246 tcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtggataatagaatttggaaatccaaatacaactgtttggaaatccaaaaaca 345  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||| ||| |||||||||||||| ||||| ||||| |||||||    
T  40166008 tcttaaagagagcgacatggtcgtgactcaacctagtaacaacttcggtagataatagaatatggtaatccaaatacaacagtttgaaaatctaaaaaca 40165909  T
Q  346 aca 348  Q
    |||    
T  40165908 aca 40165906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 135; E-Value: 3e-70
Query Start/End: Original strand, 146 - 348
Target Start/End: Original strand, 16649580 - 16649781
Alignment:
Q  146 tgcagtagttaatcgaacagttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacg 245  Q
    |||||||||||| |  |||||||||| ||| |||||||||||| ||||||||||||||||||| ||| |||||||||||||||| || |||||| |||||    
T  16649580 tgcagtagttaaccacacagttgtagctggacttgttttatcccggaggcggcgtggttgatagtctatcttgcacaattttggacagtgccac-aaacg 16649678  T
Q  246 tcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtggataatagaatttggaaatccaaatacaactgtttggaaatccaaaaaca 345  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||| |||||||||| ||||| |||||||||||||    
T  16649679 tcttaaagagagcgacctggtcgtgactcaacttagtaacaacttcggtagataatagaatttggaaattcaaatacaacagtttgaaaatccaaaaaca 16649778  T
Q  346 aca 348  Q
    |||    
T  16649779 aca 16649781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 135; E-Value: 3e-70
Query Start/End: Original strand, 146 - 348
Target Start/End: Original strand, 26927689 - 26927891
Alignment:
Q  146 tgcagtagttaatcgaacagttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacg 245  Q
    ||||||||||||  | |||||||||| ||||||||||||||  | |||||||||||||||||| |||| |||||||||||||||||| ||||||||||||    
T  26927689 tgcagtagttaagtgtacagttgtagctgggcttgttttattttagaggcggcgtggttgatagtctgccttgcacaattttgggcaatgccacgaaacg 26927788  T
Q  246 tcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtggataatagaatttggaaatccaaatacaactgtttggaaatccaaaaaca 345  Q
    |||||||||||||||| | |||||||||||||||||||||||||||||| |||||||||||||  ||||||||||||||| ||||| |||||||||||||    
T  26927789 tcttaaagagagcgacttagtcgtgactcaacctagtaacaacttcggtagataatagaatttaaaaatccaaatacaacagtttgaaaatccaaaaaca 26927888  T
Q  346 aca 348  Q
    |||    
T  26927889 aca 26927891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 131; E-Value: 7e-68
Query Start/End: Original strand, 146 - 348
Target Start/End: Complemental strand, 10135584 - 10135382
Alignment:
Q  146 tgcagtagttaatcgaacagttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacg 245  Q
    |||||||||||| || ||||||| |  ||||||||||||||||| |||||||||||||||||  |||| ||||||||||||| || | ||||||||||||    
T  10135584 tgcagtagttaaccgcacagttgcaactgggcttgttttatcctagaggcggcgtggttgattgtctgccttgcacaattttaggtagtgccacgaaacg 10135485  T
Q  246 tcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtggataatagaatttggaaatccaaatacaactgtttggaaatccaaaaaca 345  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||   |||||||||| ||||||||    
T  10135484 tcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtagataatagaacttggaaatccaaatacaggagtttggaaatacaaaaaca 10135385  T
Q  346 aca 348  Q
    |||    
T  10135384 aca 10135382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 11 - 148
Target Start/End: Complemental strand, 10137136 - 10136999
Alignment:
Q  11 cacagaataattagagagctctaaaaggaacggttaaagtatatcgtgcacgtactgataaagaattattcaatcctttgacgaaaggaattactagaaa 110  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  10137136 cacagaatgattagagagctctaaaaggaacggttaaagtatatcgtgcacgtactgataaagaattagtcaatcctttgacgaaaggaattactagaaa 10137037  T
Q  111 gaaagtcataaacacatccaataggatgtgactaatgc 148  Q
    ||||||| |||||||||||||||||||| |||||||||    
T  10137036 gaaagtcctaaacacatccaataggatgggactaatgc 10136999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 146 - 348
Target Start/End: Complemental strand, 16035736 - 16035528
Alignment:
Q  146 tgcagtagttaatcgaacagttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacg 245  Q
    |||||||||||| |  ||| |||||| || |||||||||||||||||||||||||||||||||||||||||||||||| ||||| || ||||||||||||    
T  16035736 tgcagtagttaaccacacatttgtagatgagcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaactttggacagtgccacgaaacg 16035637  T
Q  246 tcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtggata------atagaatttggaaatccaaatacaactgtttggaaatcca 339  Q
    | |||||||| |||||||||||||||||||||||||||||||||| ||| ||||       ||||||||| ||||||||||||||| |||||||||||||    
T  16035636 tgttaaagagggcgacctggtcgtgactcaacctagtaacaactttggtagatattcattttagaatttgaaaatccaaatacaacagtttggaaatcca 16035537  T
Q  340 aaaacaaca 348  Q
    |||||||||    
T  16035536 aaaacaaca 16035528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 201 - 343
Target Start/End: Complemental strand, 3094187 - 3094045
Alignment:
Q  201 ggttgataatctgtcttgcacaattttgggcattgccacgaaacgtcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtggataa 300  Q
    |||||||| |||| |||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  3094187 ggttgatagtctgccttgcacaattttgggcagtgccatgaaacgtcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtagataa 3094088  T
Q  301 tagaatttggaaatccaaatacaactgtttggaaatccaaaaa 343  Q
    ||||||||||||||||||||||||| |||||||||||||||||    
T  3094087 tagaatttggaaatccaaatacaacagtttggaaatccaaaaa 3094045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 216 - 348
Target Start/End: Complemental strand, 25855229 - 25855097
Alignment:
Q  216 ttgcacaattttgggcattgccacgaaacgtcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtggataatagaatttggaaatc 315  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  25855229 ttgcacaattttgggcagtgccacgaaacgtcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtagataatagaatttggaaatc 25855130  T
Q  316 caaatacaactgtttggaaatccaaaaacaaca 348  Q
    |||||||||| |||||||||| |||||||||||    
T  25855129 caaatacaacagtttggaaattcaaaaacaaca 25855097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 116; E-Value: 7e-59
Query Start/End: Original strand, 144 - 343
Target Start/End: Complemental strand, 38620822 - 38620624
Alignment:
Q  144 aatgcagtagttaatcgaacagttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaa 243  Q
    |||||||||||||| || |||||||||||||| ||||||||||| |||||||||||| ||||||| |||| ||||||||||||||| || ||| ||||||    
T  38620822 aatgcagtagttaaccgcacagttgtagttggacttgttttatcttggaggcggcgtagttgatagtctgccttgcacaattttggacaatgc-acgaaa 38620724  T
Q  244 cgtcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtggataatagaatttggaaatccaaatacaactgtttggaaatccaaaaa 343  Q
    |||||||||||||| || ||||||| ||||||||||| ||| ||||||||| ||||||| |||||||||||||||||||||| ||||| |||| ||||||    
T  38620723 cgtcttaaagagagtgatctggtcgcgactcaacctaataataacttcggtagataataaaatttggaaatccaaatacaacagtttgaaaattcaaaaa 38620624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 111; E-Value: 6e-56
Query Start/End: Original strand, 146 - 348
Target Start/End: Complemental strand, 10140217 - 10140015
Alignment:
Q  146 tgcagtagttaatcgaacagttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacg 245  Q
    |||||||||||| || ||||||| || ||||||||||||||||| |||| ||||||||||||  |||| |||||||||||||| | | ||||||||||||    
T  10140217 tgcagtagttaaccgcacagttgcagctgggcttgttttatcctagaggtggcgtggttgattgtctgccttgcacaattttgagtagtgccacgaaacg 10140118  T
Q  246 tcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtggataatagaatttggaaatccaaatacaactgtttggaaatccaaaaaca 345  Q
    | ||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||  ||| |||||||||||||   |||||| ||| ||||||||    
T  10140117 tgttaaagagagcgacctgatcgtgactcaacctagtaacaacttcggtagataatagatcttgaaaatccaaatacagtagtttgggaatacaaaaaca 10140018  T
Q  346 aca 348  Q
    |||    
T  10140017 aca 10140015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 106; E-Value: 6e-53
Query Start/End: Original strand, 11 - 148
Target Start/End: Complemental strand, 25845567 - 25845430
Alignment:
Q  11 cacagaataattagagagctctaaaaggaacggttaaagtatatcgtgcacgtactgataaagaattattcaatcctttgacgaaaggaattactagaaa 110  Q
    |||| ||| ||||||||||||||||||||||| ||||||||||||||||||||| | ||||||||||| |||||||||||||||||||||||||||||||    
T  25845567 cacataatgattagagagctctaaaaggaacgattaaagtatatcgtgcacgtattaataaagaattagtcaatcctttgacgaaaggaattactagaaa 25845468  T
Q  111 gaaagtcataaacacatccaataggatgtgactaatgc 148  Q
    ||||||| |||||||||||||||||||| |||||||||    
T  25845467 gaaagtcttaaacacatccaataggatgagactaatgc 25845430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 177 - 346
Target Start/End: Original strand, 18784547 - 18784716
Alignment:
Q  177 cttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtcttaaagagagcgacctggtcgtgactcaa 276  Q
    |||||||||| ||||||||||||||||||||| |||| ||||||||||||| |||| |||||||||| |||||||| ||||||||||| |||||||||||    
T  18784547 cttgttttattctggaggcggcgtggttgatagtctgccttgcacaattttaggcagtgccacgaaatgtcttaaa-agagcgacctgatcgtgactcaa 18784645  T
Q  277 cctagtaacaacttcggtggataatagaatttggaaatccaa-atacaactgtttggaaatccaaaaacaa 346  Q
    |||||||||||||||| | || |||||||||| |||| |||| ||||||| ||||||||||||||||||||    
T  18784646 cctagtaacaacttcgctagaaaatagaatttagaaaaccaacatacaacagtttggaaatccaaaaacaa 18784716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 145 - 291
Target Start/End: Complemental strand, 12260125 - 12259979
Alignment:
Q  145 atgcagtagttaatcgaacagttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaac 244  Q
    ||||||||||||| || | |||||||  || | ||||||||||||  || |||||||||||||| ||||||||||||||||||||||| || ||||||||    
T  12260125 atgcagtagttaaccgcatagttgtacatgtgtttgttttatcctaaagacggcgtggttgatagtctgtcttgcacaattttgggcagtgtcacgaaac 12260026  T
Q  245 gtcttaaagagagcgacctggtcgtgactcaacctagtaacaacttc 291  Q
    ||||||||||||||||| |||||||| ||||||| ||||||||||||    
T  12260025 gtcttaaagagagcgacatggtcgtgtctcaaccaagtaacaacttc 12259979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 237 - 348
Target Start/End: Complemental strand, 16832138 - 16832027
Alignment:
Q  237 cacgaaacgtcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtggataatagaatttggaaatccaaatacaactgtttggaaat 336  Q
    |||| |||||||||||||||||||||||||||||||||||  ||||||||||||  || |||||||||||||||||||||||||||||| ||||||||||    
T  16832138 cacggaacgtcttaaagagagcgacctggtcgtgactcaatatagtaacaacttaagtagataatagaatttggaaatccaaatacaacggtttggaaat 16832039  T
Q  337 ccaaaaacaaca 348  Q
    ||||| ||||||    
T  16832038 ccaaatacaaca 16832027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 265 - 348
Target Start/End: Complemental strand, 25843821 - 25843738
Alignment:
Q  265 gtcgtgactcaacctagtaacaacttcggtggataatagaatttggaaatccaaatacaactgtttggaaatccaaaaacaaca 348  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||| |||||||||||    
T  25843821 gtcgtgactcaacctagtaacaacttcggtagataatagaatttggaaatccaaatacaacagtttggaaattcaaaaacaaca 25843738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 177 - 299
Target Start/End: Complemental strand, 8900351 - 8900229
Alignment:
Q  177 cttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtcttaaagagagcgacctggtcgtgactcaa 276  Q
    ||||||||||||||||||||| ||| |||||| | ||| |||||||| ||| | || || ||| |||||| |||||||||||||  ||||||||||||||    
T  8900351 cttgttttatcctggaggcggtgtgattgatagtatgttttgcacaactttagacagtgtcacaaaacgttttaaagagagcgatatggtcgtgactcaa 8900252  T
Q  277 cctagtaacaacttcggtggata 299  Q
    |||||||||||||||||| ||||    
T  8900251 cctagtaacaacttcggtagata 8900229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 146 - 292
Target Start/End: Complemental strand, 11806487 - 11806341
Alignment:
Q  146 tgcagtagttaatcgaacagttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacg 245  Q
    ||||||| |||| || ||| |||||||||  ||| |||||| ||| ||||||||||||||||| |||| |||| || | |||| ||| || ||||||||     
T  11806487 tgcagtatttaaccgcacaattgtagttgaacttcttttattctgaaggcggcgtggttgatagtctgccttgtaccactttgcgcagtgtcacgaaaca 11806388  T
Q  246 tcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcg 292  Q
    ||||||||||||||| ||||| ||||||||||||| |||||||||||    
T  11806387 tcttaaagagagcgatctggttgtgactcaacctaataacaacttcg 11806341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 178 - 284
Target Start/End: Original strand, 2493817 - 2493923
Alignment:
Q  178 ttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtcttaaagagagcgacct-ggtcgtgactcaa 276  Q
    |||||||||||||| |||| ||||||||||| | || |||||||||||||||||| |||||||||||||||||||||||||||||| | | | |||||||    
T  2493817 ttgttttatcctgggggcgccgtggttgatagtttg-cttgcacaattttgggcagtgccacgaaacgtcttaaagagagcgacctagtttgcgactcaa 2493915  T
Q  277 cctagtaa 284  Q
    ||||||||    
T  2493916 cctagtaa 2493923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 178 - 278
Target Start/End: Complemental strand, 10106199 - 10106100
Alignment:
Q  178 ttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtcttaaagagagcgacctggtcgtgactcaac 277  Q
    |||||||||||||||| ||||||||||| || |||  ||||||||| || ||| | |||| |||||||||||||||||||||||||||||||||||||||    
T  10106199 ttgttttatcctggagacggcgtggttgttagtctaccttgcacaactt-gggtagtgccgcgaaacgtcttaaagagagcgacctggtcgtgactcaac 10106101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 179 - 263
Target Start/End: Complemental strand, 12906248 - 12906166
Alignment:
Q  179 tgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtcttaaagagagcgacct 263  Q
    ||||||||||||| |||| ||||||||||| |||| |||||||||||||||||| ||||||||||||||||||||||||||||||    
T  12906248 tgttttatcctgg-ggcgtcgtggttgatagtctg-cttgcacaattttgggcagtgccacgaaacgtcttaaagagagcgacct 12906166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 179 - 278
Target Start/End: Complemental strand, 38734370 - 38734272
Alignment:
Q  179 tgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtcttaaagagagcgacctggtcgtgactcaacc 278  Q
    ||||||||||||||| ||||||||||| || |||  ||||||||| |  ||| | |||| ||||||||||||||||||||||||||||||||||||||||    
T  38734370 tgttttatcctggagacggcgtggttgttagtctaccttgcacaacta-gggtagtgccgcgaaacgtcttaaagagagcgacctggtcgtgactcaacc 38734272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 146 - 244
Target Start/End: Complemental strand, 8138067 - 8137969
Alignment:
Q  146 tgcagtagttaatcgaacagttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaac 244  Q
    |||||||||||| || |||||||||| || |||||||||||||||||||||   ||||||||| |||| ||||||||| ||| |||| |||||||||||    
T  8138067 tgcagtagttaaccgcacagttgtagctgagcttgttttatcctggaggcgatatggttgatagtctgccttgcacaactttaggcaatgccacgaaac 8137969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 32 - 148
Target Start/End: Complemental strand, 11810696 - 11810583
Alignment:
Q  32 taaaaggaacggttaaagtatatcgtgcacgtactgataaagaattattcaatcctttgacgaaaggaattactagaaagaaagtcataaacacatccaa 131  Q
    ||||||||||||||||| || ||| || |||||||||| |||||||| |  |||||||||||||| |||| |||   ||||||||| |||||||||||||    
T  11810696 taaaaggaacggttaaaatagatcatgtacgtactgatgaagaattagttgatcctttgacgaaatgaataact---aagaaagtcctaaacacatccaa 11810600  T
Q  132 taggatgtgactaatgc 148  Q
    ||||||| | |||||||    
T  11810599 taggatggggctaatgc 11810583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 179 - 284
Target Start/End: Original strand, 27761839 - 27761944
Alignment:
Q  179 tgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtcttaaagagagcgacctggtc-gtgactcaac 277  Q
    ||||||||||||| | || ||||||||||| |||| ||||||||||||||| || ||||||||||||| |||||||||| ||||| ||| | ||||||||    
T  27761839 tgttttatcctggggacgtcgtggttgatagtctg-cttgcacaattttggacagtgccacgaaacgttttaaagagagtgacctagtctgcgactcaac 27761937  T
Q  278 ctagtaa 284  Q
    |||||||    
T  27761938 ctagtaa 27761944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 164 - 285
Target Start/End: Complemental strand, 5346773 - 5346652
Alignment:
Q  164 agttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtcttaaagagagcgacct 263  Q
    |||||||| ||  ||||||| ||| ||||||||||||| |||||| ||||| ||| |||| ||||| || |||||| |||||| ||||||||| ||||||    
T  5346773 agttgtagctgaacttgtttcatcttggaggcggcgtgattgatagtctgtattgtacaaatttggacagtgccacaaaacgttttaaagagaacgacct 5346674  T
Q  264 ggtcgtgactcaacctagtaac 285  Q
    | | || |||||||||||||||    
T  5346673 gattgtaactcaacctagtaac 5346652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 162 - 263
Target Start/End: Original strand, 33380905 - 33381004
Alignment:
Q  162 acagttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtcttaaagagagcgac 261  Q
    |||||||||| |||||| |||||||| ||| | || ||||||||||| |||| |||||||||||||| ||| || |||||||||||||||||||||||||    
T  33380905 acagttgtagctgggct-gttttatcttggggacgtcgtggttgatagtctg-cttgcacaattttgagcagtgtcacgaaacgtcttaaagagagcgac 33381002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 144 - 232
Target Start/End: Complemental strand, 16833614 - 16833526
Alignment:
Q  144 aatgcagtagttaatcgaacagttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggca 232  Q
    |||||||||||||||||||||||||||| || |  |||||||||||||| | |||| |||||||| | ||||||||| |||||||||||    
T  16833614 aatgcagtagttaatcgaacagttgtagctgaggctgttttatcctggatgtggcgaggttgatagtttgtcttgcataattttgggca 16833526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 179 - 278
Target Start/End: Complemental strand, 13890908 - 13890810
Alignment:
Q  179 tgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtcttaaagagagcgacctggtcgtgactcaacc 278  Q
    ||||||||||||||| ||| ||||||| || |||  ||||||||| || ||| | |||| | ||||||||||||||||||||||||||||||||||||||    
T  13890908 tgttttatcctggagacggtgtggttgttagtctaccttgcacaactt-gggtagtgccgcaaaacgtcttaaagagagcgacctggtcgtgactcaacc 13890810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 179 - 278
Target Start/End: Original strand, 39747165 - 39747263
Alignment:
Q  179 tgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtcttaaagagagcgacctggtcgtgactcaacc 278  Q
    ||||||||||||||| || |||||||| || |||  ||||||||| || ||| | |||| |||||||||||||||||||| |||||||||||||||||||    
T  39747165 tgttttatcctggagacgacgtggttgctagtctaccttgcacaactt-gggtagtgccgcgaaacgtcttaaagagagcaacctggtcgtgactcaacc 39747263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 146 - 208
Target Start/End: Complemental strand, 25843884 - 25843822
Alignment:
Q  146 tgcagtagttaatcgaacagttgtagttgggcttgttttatcctggaggcggcgtggttgata 208  Q
    |||||||||||| || |||||||||| |||||||||||||| |||||||||||||||||||||    
T  25843884 tgcagtagttaaccgcacagttgtagctgggcttgttttatactggaggcggcgtggttgata 25843822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 179 - 275
Target Start/End: Complemental strand, 5725074 - 5724979
Alignment:
Q  179 tgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtcttaaagagagcgacctggtcgtgactca 275  Q
    ||||||||||||||| ||||| ||||| || |||  |||||||||||| ||  | |||| |||||||||||||||| ||||||||||||||||||||    
T  5725074 tgttttatcctggagacggcgcggttgctagtctaccttgcacaatttaggt-agtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactca 5724979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 179 - 275
Target Start/End: Original strand, 36684715 - 36684810
Alignment:
Q  179 tgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtcttaaagagagcgacctggtcgtgactca 275  Q
    ||||||||||||||| ||||| ||||| || |||  |||||||||||  ||  | |||| |||||||||||||||||||||||||||||||||||||    
T  36684715 tgttttatcctggagacggcgcggttgctagtctaccttgcacaattcaggt-agtgccgcgaaacgtcttaaagagagcgacctggtcgtgactca 36684810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 162 - 284
Target Start/End: Original strand, 24159783 - 24159904
Alignment:
Q  162 acagttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtcttaaagagagcgac 261  Q
    |||||||||| || ||| |||||||||||| | || ||| ||||||| |||| |||||||||||||||||| |   ||||||||||||||||||||||||    
T  24159783 acagttgtagctgagct-gttttatcctggggacgtcgtcgttgatagtctg-cttgcacaattttgggcagtattacgaaacgtcttaaagagagcgac 24159880  T
Q  262 ctggt-cgtgactcaacctagtaa 284  Q
    || || || |||||| ||||||||    
T  24159881 ctagtccgcgactcagcctagtaa 24159904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 179 - 278
Target Start/End: Original strand, 26651166 - 26651264
Alignment:
Q  179 tgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtcttaaagagagcgacctggtcgtgactcaacc 278  Q
    ||||||||||||||| ||||||||||| || |||  ||||||||| || ||| | |||| | |||| |||||||||||| ||||||||||||||||||||    
T  26651166 tgttttatcctggagacggcgtggttgttagtctaccttgcacaactt-gggtagtgccgcaaaacatcttaaagagagtgacctggtcgtgactcaacc 26651264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 179 - 284
Target Start/End: Complemental strand, 36724803 - 36724698
Alignment:
Q  179 tgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtcttaaagagagcgacctggt-cgtgactcaac 277  Q
    ||||||||| ||| |||| ||||||||||  |||| |||||||||||||||| | |||||  ||||||||||||||||||||||| || | ||||||| |    
T  36724803 tgttttatcttgggggcgtcgtggttgattgtctg-cttgcacaattttgggtagtgccataaaacgtcttaaagagagcgacctagtccatgactcagc 36724705  T
Q  278 ctagtaa 284  Q
    |||||||    
T  36724704 ctagtaa 36724698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 179 - 275
Target Start/End: Complemental strand, 3584696 - 3584601
Alignment:
Q  179 tgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtcttaaagagagcgacctggtcgtgactca 275  Q
    ||||||||||||||| ||||| ||||| || |||  |||||||||||| ||   || || |||||||||||||||| ||||||||||||||||||||    
T  3584696 tgttttatcctggagacggcgcggttgctagtctaccttgcacaatttaggtagtt-ccgcgaaacgtcttaaagaaagcgacctggtcgtgactca 3584601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 179 - 275
Target Start/End: Original strand, 11251113 - 11251208
Alignment:
Q  179 tgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtcttaaagagagcgacctggtcgtgactca 275  Q
    ||||||||||||||| ||||| ||||| || |||  ||||||||| || ||  | |||| |||||||||||||||| ||||||||||||||||||||    
T  11251113 tgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggt-agtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactca 11251208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 179 - 275
Target Start/End: Original strand, 34318224 - 34318319
Alignment:
Q  179 tgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtcttaaagagagcgacctggtcgtgactca 275  Q
    ||||||||||||||| ||||| ||||| || |||  |||||||||||  ||  | |||| ||||||||||||||||||||||| |||||||||||||    
T  34318224 tgttttatcctggagacggcgcggttgctagtctaccttgcacaattcaggt-agtgccgcgaaacgtcttaaagagagcgacttggtcgtgactca 34318319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 179 - 275
Target Start/End: Original strand, 37404416 - 37404511
Alignment:
Q  179 tgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtcttaaagagagcgacctggtcgtgactca 275  Q
    ||||||||||||||| ||||| ||||| || |||  ||||||||| || ||  | |||| |||||||||||||||| ||||||||||||||||||||    
T  37404416 tgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggt-agtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactca 37404511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 179 - 278
Target Start/End: Original strand, 5602425 - 5602523
Alignment:
Q  179 tgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtcttaaagagagcgacctggtcgtgactcaacc 278  Q
    ||||||||| ||||| ||||||||||| || |||  ||||||||| |  ||| | |||  |||||||||||||||||||||| |||||||||||||||||    
T  5602425 tgttttatcttggagacggcgtggttgttagtctaccttgcacaacta-gggtagtgcagcgaaacgtcttaaagagagcgatctggtcgtgactcaacc 5602523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 182 - 284
Target Start/End: Original strand, 4632929 - 4633031
Alignment:
Q  182 tttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtcttaaagagagcgacctggtcgtgactcaacctag 281  Q
    |||||| |||||| | |||| ||||||| ||  ||||||||| || ||  | |||| | ||||||||||||||||||||| | |||||||||||||||||    
T  4632929 tttatcatggaggagtcgtgattgataacctaccttgcacaaattcggatagtgccgcaaaacgtcttaaagagagcgacatagtcgtgactcaacctag 4633028  T
Q  282 taa 284  Q
    |||    
T  4633029 taa 4633031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 178 - 263
Target Start/End: Original strand, 23193222 - 23193306
Alignment:
Q  178 ttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtcttaaagagagcgacct 263  Q
    |||||||||| ||| |||| ||||||||||| |||| |||||| |||||||||   ||||| ||||||||||| ||||||||||||    
T  23193222 ttgttttatcatgggggcgtcgtggttgatagtctg-cttgcataattttgggttgtgccatgaaacgtcttatagagagcgacct 23193306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 179 - 275
Target Start/End: Complemental strand, 5730200 - 5730105
Alignment:
Q  179 tgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtcttaaagagagcgacctggtcgtgactca 275  Q
    ||||||||||||||| ||| | ||||| || |||  |||||||||||| ||   || || |||||||||||||||| ||||||||||||||||||||    
T  5730200 tgttttatcctggagacggtgcggttgctagtctaccttgcacaatttaggtagtt-ccgcgaaacgtcttaaagaaagcgacctggtcgtgactca 5730105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 151 - 239
Target Start/End: Original strand, 25779288 - 25779376
Alignment:
Q  151 tagttaatcgaacagttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccac 239  Q
    |||||||||| ||| |||| |||||  ||||||||||||| | | ||||||| ||||||| | |||||||||||||||| || ||||||    
T  25779288 tagttaatcgtacaattgtcgttggaattgttttatcctgaatgtggcgtggctgataatatttcttgcacaattttggacagtgccac 25779376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 179 - 275
Target Start/End: Original strand, 37409537 - 37409632
Alignment:
Q  179 tgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtcttaaagagagcgacctggtcgtgactca 275  Q
    ||||||||||||||  ||||| ||||| || |||  ||||||||| || ||  | |||| |||||||||||||||| ||||||||||||||||||||    
T  37409537 tgttttatcctggaaacggcgcggttgctagtctaccttgcacaacttaggt-agtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactca 37409632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 179 - 278
Target Start/End: Complemental strand, 14582194 - 14582096
Alignment:
Q  179 tgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtcttaaagagagcgacctggtcgtgactcaacc 278  Q
    ||||||||||||||| ||| ||||||| || |||  ||||||||| |  ||| | |||| |||||| ||||||||||||||||||| |||| ||||||||    
T  14582194 tgttttatcctggagacggtgtggttgttagtctaccttgcacaacta-gggtagtgccgcgaaacttcttaaagagagcgacctgatcgtaactcaacc 14582096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 240 - 278
Target Start/End: Original strand, 8267891 - 8267929
Alignment:
Q  240 gaaacgtcttaaagagagcgacctggtcgtgactcaacc 278  Q
    ||||||||||||||| |||||||||||||||||||||||    
T  8267891 gaaacgtcttaaagaaagcgacctggtcgtgactcaacc 8267929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 239 - 284
Target Start/End: Original strand, 19422937 - 19422982
Alignment:
Q  239 cgaaacgtcttaaagagagcgacctggtcgtgactcaacctagtaa 284  Q
    |||||||||||||||||||||| ||| ||||||||||||| |||||    
T  19422937 cgaaacgtcttaaagagagcgatctgatcgtgactcaacccagtaa 19422982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 234 - 275
Target Start/End: Complemental strand, 27716484 - 27716443
Alignment:
Q  234 tgccacgaaacgtcttaaagagagcgacctggtcgtgactca 275  Q
    |||| |||||||||||||||| ||||||||||||||||||||    
T  27716484 tgccgcgaaacgtcttaaagaaagcgacctggtcgtgactca 27716443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 149 - 286
Target Start/End: Original strand, 28434544 - 28434680
Alignment:
Q  149 agtagttaatcgaacagttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtct 248  Q
    |||||||||  | ||| |||||||||  ||||||||||||||||| ||||  |||||||| |||||  ||||||| ||| | || || || |||||||||    
T  28434544 agtagttaactgcacaattgtagttgaacttgttttatcctggagacggcaaggttgatagtctgtggtgcacaagttt-gacagtgtcatgaaacgtct 28434642  T
Q  249 taaagagagcgacctggtcgtgactcaacctagtaaca 286  Q
    |||| |||| | | || | || ||||||||||||||||    
T  28434643 taaaaagagtggcatgcttgtaactcaacctagtaaca 28434680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 299 - 348
Target Start/End: Complemental strand, 46696645 - 46696596
Alignment:
Q  299 aatagaatttggaaatccaaatacaactgtttggaaatccaaaaacaaca 348  Q
    ||||||||||||||||| ||||| ||| ||||| ||||||||||||||||    
T  46696645 aatagaatttggaaatctaaataaaacagtttgaaaatccaaaaacaaca 46696596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 179 - 263
Target Start/End: Complemental strand, 31064050 - 31063968
Alignment:
Q  179 tgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtcttaaagagagcgacct 263  Q
    ||||||||||||| | || ||||||||||| | || |||| ||||||||||  | ||||||||||| ||||||||||||||||||    
T  31064050 tgttttatcctgg-gacgtcgtggttgatagtttg-cttgaacaattttggaaagtgccacgaaacctcttaaagagagcgacct 31063968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 181 - 243
Target Start/End: Original strand, 28858065 - 28858126
Alignment:
Q  181 ttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaa 243  Q
    ||||||||||| | || ||||||||||| |||| |||||||||||||| ||| ||||||||||    
T  28858065 ttttatcctggggacgtcgtggttgatagtctg-cttgcacaattttgagcaatgccacgaaa 28858126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 234 - 275
Target Start/End: Original strand, 11387884 - 11387925
Alignment:
Q  234 tgccacgaaacgtcttaaagagagcgacctggtcgtgactca 275  Q
    |||| |||||||||||||| | ||||||||||||||||||||    
T  11387884 tgccgcgaaacgtcttaaaaaaagcgacctggtcgtgactca 11387925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 299 - 348
Target Start/End: Complemental strand, 12259959 - 12259911
Alignment:
Q  299 aatagaatttggaaatccaaatacaactgtttggaaatccaaaaacaaca 348  Q
    ||||||||| ||||||||||||| ||| || |||||||||||||||||||    
T  12259959 aatagaatt-ggaaatccaaatataacagtgtggaaatccaaaaacaaca 12259911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 215 - 256
Target Start/End: Original strand, 25661858 - 25661899
Alignment:
Q  215 cttgcacaattttgggcattgccacgaaacgtcttaaagaga 256  Q
    |||||||||||||||| | |||||| ||||||||||||||||    
T  25661858 cttgcacaattttgggtagtgccacaaaacgtcttaaagaga 25661899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 166 - 263
Target Start/End: Complemental strand, 32987347 - 32987252
Alignment:
Q  166 ttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtcttaaagagagcgacct 263  Q
    |||||||||| || ||||| |||| | |||| | || |||||| |||| ||||||||||||| |||| |||||| |||| |||||||||||| |||||    
T  32987347 ttgtagttggact-gttttctcctaggggcgtcatgattgatagtctg-cttgcacaattttaggcagtgccacaaaacatcttaaagagagtgacct 32987252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 83 - 148
Target Start/End: Original strand, 37408526 - 37408591
Alignment:
Q  83 atcctttgacgaaaggaattactagaaagaaagtcataaacacatccaataggatgtgactaatgc 148  Q
    ||||||||||||||||| | |  ||| ||||||||| ||| ||||||| ||||||| |||||||||    
T  37408526 atcctttgacgaaaggactaaacagagagaaagtcacaaatacatccagtaggatgagactaatgc 37408591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 245 - 278
Target Start/End: Original strand, 41098017 - 41098050
Alignment:
Q  245 gtcttaaagagagcgacctggtcgtgactcaacc 278  Q
    |||||||||| |||||||||||||||||||||||    
T  41098017 gtcttaaagaaagcgacctggtcgtgactcaacc 41098050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 304 - 348
Target Start/End: Complemental strand, 8900206 - 8900162
Alignment:
Q  304 aatttggaaatccaaatacaactgtttggaaatccaaaaacaaca 348  Q
    ||||||||||| ||||| |||| ||||| ||||||||||||||||    
T  8900206 aatttggaaattcaaatgcaacagtttgaaaatccaaaaacaaca 8900162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 299 - 347
Target Start/End: Original strand, 28434705 - 28434753
Alignment:
Q  299 aatagaatttggaaatccaaatacaactgtttggaaatccaaaaacaac 347  Q
    ||||||||||| |||| |||||||||  ||||| |||||||||||||||    
T  28434705 aatagaatttgaaaattcaaatacaatagtttgaaaatccaaaaacaac 28434753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0182 (Bit Score: 183; Significance: 7e-99; HSPs: 1)
Name: scaffold0182
Description:

Target: scaffold0182; HSP #1
Raw Score: 183; E-Value: 7e-99
Query Start/End: Original strand, 146 - 348
Target Start/End: Original strand, 9854 - 10056
Alignment:
Q  146 tgcagtagttaatcgaacagttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacg 245  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||| ||||||||||||    
T  9854 tgcagtagttaatcgaacagttgtagctgggcttgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttgggcagtgccacgaaacg 9953  T
Q  246 tcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtggataatagaatttggaaatccaaatacaactgtttggaaatccaaaaaca 345  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9954 tcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtagataatagaatttggaaatccaaatacaactgtttggaaatccaaaaaca 10053  T
Q  346 aca 348  Q
    |||    
T  10054 aca 10056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 179; Significance: 2e-96; HSPs: 64)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 179; E-Value: 2e-96
Query Start/End: Original strand, 146 - 348
Target Start/End: Original strand, 29167940 - 29168142
Alignment:
Q  146 tgcagtagttaatcgaacagttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacg 245  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||| ||||||||||||    
T  29167940 tgcagtagttaatcgaacagttgtagttgggcttgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttgggcagtgccacgaaacg 29168039  T
Q  246 tcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtggataatagaatttggaaatccaaatacaactgtttggaaatccaaaaaca 345  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||| |||||||||||||||||||    
T  29168040 tcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtagataatagaatttggaaattcaaatacaacagtttggaaatccaaaaaca 29168139  T
Q  346 aca 348  Q
    |||    
T  29168140 aca 29168142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 175; E-Value: 4e-94
Query Start/End: Original strand, 146 - 348
Target Start/End: Complemental strand, 556823 - 556621
Alignment:
Q  146 tgcagtagttaatcgaacagttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacg 245  Q
    |||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||| |||| |||||||||||||||||| |||||| |||||    
T  556823 tgcagtagttaatcgaacagttgtagctgagcttgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttgggcagtgccacaaaacg 556724  T
Q  246 tcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtggataatagaatttggaaatccaaatacaactgtttggaaatccaaaaaca 345  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  556723 tcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtagataatagaatttggaaatccaaatacaactgtttggaaatccaaaaaca 556624  T
Q  346 aca 348  Q
    |||    
T  556623 aca 556621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 175; E-Value: 4e-94
Query Start/End: Original strand, 146 - 348
Target Start/End: Complemental strand, 561595 - 561393
Alignment:
Q  146 tgcagtagttaatcgaacagttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacg 245  Q
    |||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||| |||| |||||||||||||||||| |||||| |||||    
T  561595 tgcagtagttaatcgaacagttgtagctgagcttgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttgggcagtgccacaaaacg 561496  T
Q  246 tcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtggataatagaatttggaaatccaaatacaactgtttggaaatccaaaaaca 345  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  561495 tcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtagataatagaatttggaaatccaaatacaactgtttggaaatccaaaaaca 561396  T
Q  346 aca 348  Q
    |||    
T  561395 aca 561393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 173; E-Value: 6e-93
Query Start/End: Original strand, 148 - 348
Target Start/End: Complemental strand, 41996791 - 41996591
Alignment:
Q  148 cagtagttaatcgaacagttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtc 247  Q
    |||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||| ||||||||||||||    
T  41996791 cagtagttaaccgcacagttgtagttgggcttgttttatcctggaggcggcgtggttgatagtctgtcttacacaattttgggcagtgccacgaaacgtc 41996692  T
Q  248 ttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtggataatagaatttggaaatccaaatacaactgtttggaaatccaaaaacaac 347  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41996691 ttaaagagagcaacctggtcgtgactcaacctagtaacaacttcggtagataatagaatttggaaatccaaatacaactgtttggaaatccaaaaacaac 41996592  T
Q  348 a 348  Q
    |    
T  41996591 a 41996591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 173; E-Value: 6e-93
Query Start/End: Original strand, 148 - 348
Target Start/End: Complemental strand, 42001560 - 42001360
Alignment:
Q  148 cagtagttaatcgaacagttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtc 247  Q
    |||||||||| || |||||||||| |||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||| ||||||||||||||    
T  42001560 cagtagttaaccgcacagttgtagctgggcttgttttatcctggaggcggcgtggttgatagtctgtcttacacaattttgggcagtgccacgaaacgtc 42001461  T
Q  248 ttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtggataatagaatttggaaatccaaatacaactgtttggaaatccaaaaacaac 347  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42001460 ttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtagataatagaatttggaaatccaaatacaactgtttggaaatccaaaaacaac 42001361  T
Q  348 a 348  Q
    |    
T  42001360 a 42001360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 164; E-Value: 1e-87
Query Start/End: Original strand, 146 - 348
Target Start/End: Complemental strand, 12103153 - 12102950
Alignment:
Q  146 tgcagtagttaatcgaacagttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacg 245  Q
    ||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||| ||||||||||||    
T  12103153 tgcagtagttaatcgcacatttgtagttgggcttgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttgggcagtgccacgaaacg 12103054  T
Q  246 tcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtggataatagaattt-ggaaatccaaatacaactgtttggaaatccaaaaac 344  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||| ||||||||||||||||| ||||||||||||||||||    
T  12103053 tcttaaagagagcgacctggtcgtaactcaacctagtaacaacttcggtagataatagaatttgggaaatccaaatacaacagtttggaaatccaaaaac 12102954  T
Q  345 aaca 348  Q
    ||||    
T  12102953 aaca 12102950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 159; E-Value: 1e-84
Query Start/End: Original strand, 146 - 348
Target Start/End: Complemental strand, 26667400 - 26667198
Alignment:
Q  146 tgcagtagttaatcgaacagttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacg 245  Q
    ||||||||||||||||||||||| || ||| |||||||||||||||||||||||||||||||| |||| |||||||||||||||||| ||||||||||||    
T  26667400 tgcagtagttaatcgaacagttgcagctggacttgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttgggcagtgccacgaaacg 26667301  T
Q  246 tcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtggataatagaatttggaaatccaaatacaactgtttggaaatccaaaaaca 345  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||  ||||||||||| |||||||    
T  26667300 tcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtagataatagaatttggaactccaaatacaatagtttggaaatctaaaaaca 26667201  T
Q  346 aca 348  Q
    |||    
T  26667200 aca 26667198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 159; E-Value: 1e-84
Query Start/End: Original strand, 146 - 348
Target Start/End: Complemental strand, 26938997 - 26938795
Alignment:
Q  146 tgcagtagttaatcgaacagttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacg 245  Q
    ||||||||||||||||||||||| || ||| |||||||||||||||||||||||||||||||| |||| |||||||||||||||||| ||||||||||||    
T  26938997 tgcagtagttaatcgaacagttgcagctggacttgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttgggcagtgccacgaaacg 26938898  T
Q  246 tcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtggataatagaatttggaaatccaaatacaactgtttggaaatccaaaaaca 345  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||  ||||||||||| |||||||    
T  26938897 tcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtagataatagaatttggaactccaaatacaatagtttggaaatctaaaaaca 26938798  T
Q  346 aca 348  Q
    |||    
T  26938797 aca 26938795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 158; E-Value: 6e-84
Query Start/End: Original strand, 146 - 343
Target Start/End: Complemental strand, 36428837 - 36428640
Alignment:
Q  146 tgcagtagttaatcgaacagttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacg 245  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||| | || | |||||    
T  36428837 tgcagtagttaatcgaacagttgtagctgggcttgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttgggcagttccgcaaaacg 36428738  T
Q  246 tcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtggataatagaatttggaaatccaaatacaactgtttggaaatccaaaaa 343  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||| |||||||||||||||||    
T  36428737 tcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcgttagataatagaatttggaaatccaaatacaacagtttggaaatccaaaaa 36428640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 156; E-Value: 9e-83
Query Start/End: Original strand, 146 - 348
Target Start/End: Original strand, 12501866 - 12502069
Alignment:
Q  146 tgcagtagttaatcgaacagttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacg 245  Q
    |||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||| ||||||||||||    
T  12501866 tgcagtagttaaccgaacagttgtagctgggcttgttttatcctggaggcggcgtggttgatagtctgttttgcacaattttgggcagtgccacgaaacg 12501965  T
Q  246 tcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtggataatagaatttggaaatccaaatac-aactgtttggaaatccaaaaac 344  Q
    |||||||||||||||||||||| ||||||||||||||||||||||| || ||||||||||||||||||||||||||| ||| ||||| ||||||||||||    
T  12501966 tcttaaagagagcgacctggtcatgactcaacctagtaacaacttcagtagataatagaatttggaaatccaaatacgaacagtttgaaaatccaaaaac 12502065  T
Q  345 aaca 348  Q
    ||||    
T  12502066 aaca 12502069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 152; E-Value: 2e-80
Query Start/End: Original strand, 146 - 325
Target Start/End: Original strand, 36942232 - 36942411
Alignment:
Q  146 tgcagtagttaatcgaacagttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacg 245  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||| ||||| ||||||    
T  36942232 tgcagtagttaatcgaacagttgtagctgggcttgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttgggcagtgccatgaaacg 36942331  T
Q  246 tcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtggataatagaatttggaaatccaaatacaac 325  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||    
T  36942332 tcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtagataatagaatttggaaatccaaaaacaac 36942411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 152; E-Value: 2e-80
Query Start/End: Original strand, 146 - 348
Target Start/End: Complemental strand, 39523177 - 39522974
Alignment:
Q  146 tgcagtagttaatcgaacagttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacg 245  Q
    |||||||||||| || ||||||| || ||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||  ||||||||||||    
T  39523177 tgcagtagttaaccgcacagttgcagctggacttgttttatcctggaggcggcgtggttgatagtctgtcttgcacaattttgggcggtgccacgaaacg 39523078  T
Q  246 tcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtggataatagaatttggaaatccaaatac-aactgtttggaaatccaaaaac 344  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||| ||| ||||||||||||||||||    
T  39523077 tcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcgatagataatagaatttggaaatccaaatactaacagtttggaaatccaaaaac 39522978  T
Q  345 aaca 348  Q
    ||||    
T  39522977 aaca 39522974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 151; E-Value: 8e-80
Query Start/End: Original strand, 146 - 348
Target Start/End: Original strand, 6155386 - 6155588
Alignment:
Q  146 tgcagtagttaatcgaacagttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacg 245  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||| ||||||||| | |||||||| || ||||||||||||    
T  6155386 tgcagtagttaatcgaacagttgtagctgggcttgttttatcctggaggcggtgtggttgatagtctgtcttgtaaaattttggacagtgccacgaaacg 6155485  T
Q  246 tcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtggataatagaatttggaaatccaaatacaactgtttggaaatccaaaaaca 345  Q
    ||||||||||||||||||| |||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||| ||||||||| |||||| ||    
T  6155486 tcttaaagagagcgacctgatcgtgactcaacctagtaacaatttcggtagataatagaatttggaaatccaaatacaacagtttggaaaaccaaaatca 6155585  T
Q  346 aca 348  Q
    |||    
T  6155586 aca 6155588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 151; E-Value: 8e-80
Query Start/End: Original strand, 146 - 348
Target Start/End: Complemental strand, 39518538 - 39518336
Alignment:
Q  146 tgcagtagttaatcgaacagttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacg 245  Q
    |||||||||||| || ||||||| || ||| |||||||||||||||||||||||||||||||| |||| | |||||||||||||||  ||||||||||||    
T  39518538 tgcagtagttaaccgcacagttgcagctggacttgttttatcctggaggcggcgtggttgatagtctgccatgcacaattttgggcggtgccacgaaacg 39518439  T
Q  246 tcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtggataatagaatttggaaatccaaatacaactgtttggaaatccaaaaaca 345  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||| |||||||||||||||||||    
T  39518438 tcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcgatagataatagaatttggaaatccaaatacaacagtttggaaatccaaaaaca 39518339  T
Q  346 aca 348  Q
    |||    
T  39518338 aca 39518336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 148; E-Value: 5e-78
Query Start/End: Original strand, 146 - 348
Target Start/End: Original strand, 12045106 - 12045309
Alignment:
Q  146 tgcagtagttaatcgaacagttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacg 245  Q
    |||||||||||| || |||||||||| |  |||||||||||||||||||||||||||| |||| ||||||||||||||||||||||| ||||||||||||    
T  12045106 tgcagtagttaaccgcacagttgtagctatgcttgttttatcctggaggcggcgtggtcgatagtctgtcttgcacaattttgggcagtgccacgaaacg 12045205  T
Q  246 tcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtggataatagaatttggaaatcc-aaatacaactgtttggaaatccaaaaac 344  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||| || ||||||||| ||||||||||||||||||    
T  12045206 tcttaaagagggcgacctggtcgtgactcaacctagtaacaacttcggtagataatagaatttggaaaaccaaaatacaacagtttggaaatccaaaaac 12045305  T
Q  345 aaca 348  Q
    ||||    
T  12045306 aaca 12045309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 148; E-Value: 5e-78
Query Start/End: Original strand, 146 - 325
Target Start/End: Original strand, 36937478 - 36937657
Alignment:
Q  146 tgcagtagttaatcgaacagttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacg 245  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||| ||||| ||||||    
T  36937478 tgcagtagttaatcgaacagttgtagctgggcttgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttgggcagtgccatgaaacg 36937577  T
Q  246 tcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtggataatagaatttggaaatccaaatacaac 325  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||| |||||    
T  36937578 tcttaaagagagcgacctggtcgtgactcaacctaataacaacttcggtagataatagaatttggaaatccaaaaacaac 36937657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 146; E-Value: 8e-77
Query Start/End: Original strand, 162 - 351
Target Start/End: Original strand, 37248778 - 37248967
Alignment:
Q  162 acagttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtcttaaagagagcgac 261  Q
    ||||||| || |||||||||||||||||||||||||||||||||||| |||| ||||||||||||| || | |||||||||| |||||||||||||||||    
T  37248778 acagttgcagctgggcttgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttaggtagtgccacgaaatgtcttaaagagagcgac 37248877  T
Q  262 ctggtcgtgactcaacctagtaacaacttcggtggataatagaatttggaaatccaaatacaactgtttggaaatccaaaaacaacagaa 351  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||| |||||||||||||||||||||||||    
T  37248878 ctggtcgtgactcaacctagtaacaacttcggtagataatagaatttggaaatccaaatataacagtttggaaatccaaaaacaacagaa 37248967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 145; E-Value: 3e-76
Query Start/End: Original strand, 146 - 346
Target Start/End: Complemental strand, 36423765 - 36423565
Alignment:
Q  146 tgcagtagttaatcgaacagttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacg 245  Q
    |||| ||||||||| |||||| |||| |||||||||||||| ||||||||||||||||||||| |||| |||||||||||||||||| |||| |||||||    
T  36423765 tgcattagttaatcaaacagtagtagctgggcttgttttattctggaggcggcgtggttgatagtctgccttgcacaattttgggcagtgccgcgaaacg 36423666  T
Q  246 tcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtggataatagaatttggaaatccaaatacaactgtttggaaatccaaaaaca 345  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||| |||||||||||||||||||| ||||| |||||||||||||    
T  36423665 tcttaaagagagcgacctggtcgcgactcaacctagtaacaacttcggtagataatagattttggaaatccaaatacaacagtttgaaaatccaaaaaca 36423566  T
Q  346 a 346  Q
    |    
T  36423565 a 36423565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 140; E-Value: 3e-73
Query Start/End: Original strand, 149 - 348
Target Start/End: Complemental strand, 7451883 - 7451684
Alignment:
Q  149 agtagttaatcgaacagttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtct 248  Q
    ||||||||| || ||||||| || || |||||||||||||||||||| |||||||||||| |||| ||||||||||||||| || |||||||||||||||    
T  7451883 agtagttaaccgcacagttgcagctgagcttgttttatcctggaggcagcgtggttgatagtctgccttgcacaattttggacagtgccacgaaacgtct 7451784  T
Q  249 taaagagagcgacctggtcgtgactcaacctagtaacaacttcggtggataatagaatttggaaatccaaatacaactgtttggaaatccaaaaacaaca 348  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||| |||||||||| ||||| ||||||||||||||||    
T  7451783 taaagagagcgacctggtcgtgactcaacctagtaacaacttcggtagataatagaatttgaaaattcaaatacaacagtttgaaaatccaaaaacaaca 7451684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 146 - 348
Target Start/End: Original strand, 41587127 - 41587329
Alignment:
Q  146 tgcagtagttaatcgaacagttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacg 245  Q
    |||||||||||| || |||||||||| || ||||||||||||||||||||||||||||||||| |||||||||||||||||||  || || |||||||||    
T  41587127 tgcagtagttaaccgcacagttgtagctgagcttgttttatcctggaggcggcgtggttgatagtctgtcttgcacaattttgaacagtgtcacgaaacg 41587226  T
Q  246 tcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtggataatagaatttggaaatccaaatacaactgtttggaaatccaaaaaca 345  Q
    ||||||||||||| ||||||||||||||||| ||||||||||||||||| |||||||||||||| |||| |||||||||| |||| ||||||||||||||    
T  41587227 tcttaaagagagcaacctggtcgtgactcaaactagtaacaacttcggtagataatagaatttgaaaattcaaatacaacagtttagaaatccaaaaaca 41587326  T
Q  346 aca 348  Q
    |||    
T  41587327 aca 41587329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 146 - 349
Target Start/End: Complemental strand, 3666060 - 3665856
Alignment:
Q  146 tgcagtagttaatcgaacagttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacg 245  Q
    |||||||||||| || |||||||||||||| ||||||||||||| |||| ||||||||||||| |||| |||||||||||||||||| ||||||||||||    
T  3666060 tgcagtagttaaccgcacagttgtagttggacttgttttatcctagaggtggcgtggttgatagtctgccttgcacaattttgggcagtgccacgaaacg 3665961  T
Q  246 tcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtggataatagaatttggaaatcc-aaatacaactgtttggaaatccaaaaac 344  Q
    |||| ||||||||||||| |||||||||||||||||||||||||||||| || ||||||||||| ||| || ||||||||| ||||||||||||||||||    
T  3665960 tcttgaagagagcgacctagtcgtgactcaacctagtaacaacttcggtagaaaatagaatttgaaaaaccaaaatacaacagtttggaaatccaaaaac 3665861  T
Q  345 aacag 349  Q
    |||||    
T  3665860 aacag 3665856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 151 - 348
Target Start/End: Original strand, 10759792 - 10759992
Alignment:
Q  151 tagttaatcgaacagttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtctta 250  Q
    ||||||| || |||||||||  |||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||| |||||| ||||||||||    
T  10759792 tagttaaccgcacagttgtaaatgggcttgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttgggcagtgccacaaaacgtctta 10759891  T
Q  251 aagagagcgacctggtcgtgactcaacctagtaacaacttcggtggataata----gaatttggaaatccaaatacaactgtttggaaatccaaaaacaa 346  Q
    || ||||||||||||||||||||||||||||||||||||||||| |||||||    ||||||||||||||||||||||| ||||||||||||||||||||    
T  10759892 aa-agagcgacctggtcgtgactcaacctagtaacaacttcggtagataatagaatgaatttggaaatccaaatacaacagtttggaaatccaaaaacaa 10759990  T
Q  347 ca 348  Q
    ||    
T  10759991 ca 10759992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 144 - 348
Target Start/End: Original strand, 6514566 - 6514769
Alignment:
Q  144 aatgcagtagttaatcgaacagttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaa 243  Q
    |||||||||||||| |  |||||||||| |  ||||||||||||||||||||||||||||||||| |||| |||||| ||||||||||| ||||||||||    
T  6514566 aatgcagtagttaaccacacagttgtagctaagcttgttttatcctggaggcggcgtggttgatagtctgccttgcaaaattttgggcagtgccacgaaa 6514665  T
Q  244 cgtcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtggataatagaatttggaaatccaaatacaactgtttggaaatccaaaaa 343  Q
    |||||||||||||| ||| |||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||| ||||  |||| ||||||    
T  6514666 cgtcttaaagagagtgacttggtcgtgactcaacctagtaacaactttggtagataatagaatttggaaatccaaatacaacagttttaaaat-caaaaa 6514764  T
Q  344 caaca 348  Q
    |||||    
T  6514765 caaca 6514769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 176 - 348
Target Start/End: Original strand, 37652827 - 37652999
Alignment:
Q  176 gcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtcttaaagagagcgacctggtcgtgactca 275  Q
    ||||||||||||||||||| ||||||||||||| |||| ||||||||||||||| || || |||||||||||||||||||||||||||| ||||||||||    
T  37652827 gcttgttttatcctggaggtggcgtggttgatagtctgccttgcacaattttggacaatgtcacgaaacgtcttaaagagagcgacctgatcgtgactca 37652926  T
Q  276 acctagtaacaacttcggtggataatagaatttggaaatccaaatacaactgtttggaaatccaaaaacaaca 348  Q
    ||||| ||||||||||||| ||||||||||||||||||||||||||||||  |||||||||||||||||||||    
T  37652927 acctaataacaacttcggtagataatagaatttggaaatccaaatacaacaatttggaaatccaaaaacaaca 37652999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 149 - 341
Target Start/End: Complemental strand, 40148020 - 40147828
Alignment:
Q  149 agtagttaatcgaacagttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtct 248  Q
    |||||||||| ||||| ||| || || |||| |||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||| |||    
T  40148020 agtagttaattgaacaattgaagctgagcttattttatcctggaggcggcgtggttgatagtctgtcttgcacaattttgggcagtgccacgaaacatct 40147921  T
Q  249 taaagagagcgacctggtcgtgactcaacctagtaacaacttcggtggataatagaatttggaaatccaaatacaactgtttggaaatccaaa 341  Q
    |||||||||||||||| || |||||||||||| ||||||||||| | |||||||||||||||||||||||||||||  |||||||||| ||||    
T  40147920 taaagagagcgacctgatcatgactcaacctaataacaacttcgatagataatagaatttggaaatccaaatacaatagtttggaaattcaaa 40147828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 146 - 343
Target Start/End: Original strand, 11981247 - 11981443
Alignment:
Q  146 tgcagtagttaatcgaacagttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacg 245  Q
    |||| ||||||||||||||||||||| || ||||||||||| ||||||||||||||||||||  ||||||||||||||||||||||| |||||| |||||    
T  11981247 tgcaatagttaatcgaacagttgtagatgtgcttgttttattctggaggcggcgtggttgat--tctgtcttgcacaattttgggcagtgccacaaaacg 11981344  T
Q  246 tcttaaagagagcgacctggtcgtgac-tcaacctagtaacaacttcggtggataatagaatttggaaatccaaatacaactgtttggaaatccaaaaa 343  Q
    ||||||||| |||||||||||| | |  |||||||||||||||||||||| ||||||||||||||||||||||| |||||| ||||| |||||||||||    
T  11981345 tcttaaagaaagcgacctggtcataaaatcaacctagtaacaacttcggtagataatagaatttggaaatccaactacaacagtttgaaaatccaaaaa 11981443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 11 - 148
Target Start/End: Complemental strand, 26669088 - 26668951
Alignment:
Q  11 cacagaataattagagagctctaaaaggaacggttaaagtatatcgtgcacgtactgataaagaattattcaatcctttgacgaaaggaattactagaaa 110  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  26669088 cacagaatgattagagagctctaaaaggaacggttaaagtatatcgtgcacgtactgataaagaattagtcaatcctttgacgaaaggaattactagaaa 26668989  T
Q  111 gaaagtcataaacacatccaataggatgtgactaatgc 148  Q
    ||||||| |||||||||||||||||||| |||||||||    
T  26668988 gaaagtcttaaacacatccaataggatgagactaatgc 26668951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 11 - 148
Target Start/End: Complemental strand, 26940685 - 26940548
Alignment:
Q  11 cacagaataattagagagctctaaaaggaacggttaaagtatatcgtgcacgtactgataaagaattattcaatcctttgacgaaaggaattactagaaa 110  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  26940685 cacagaatgattagagagctctaaaaggaacggttaaagtatatcgtgcacgtactgataaagaattagtcaatcctttgacgaaaggaattactagaaa 26940586  T
Q  111 gaaagtcataaacacatccaataggatgtgactaatgc 148  Q
    ||||||| |||||||||||||||||||| |||||||||    
T  26940585 gaaagtcttaaacacatccaataggatgagactaatgc 26940548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 146 - 348
Target Start/End: Original strand, 20181030 - 20181233
Alignment:
Q  146 tgcagtagttaatcgaacagttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacg 245  Q
    |||||||||||| || ||| ||||||||| |||||||||||| |||||| ||||||||| ||| ||||||||||| |||||||| || ||||||||||||    
T  20181030 tgcagtagttaaccgcacaattgtagttgagcttgttttatcatggaggtggcgtggttaatagtctgtcttgcataattttggacaatgccacgaaacg 20181129  T
Q  246 tcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtggataatagaatttggaaatccaaatacaactgttt-ggaaatccaaaaac 344  Q
    |||||||||||| |||||||||||||||||||||| |||||| ||| || |||||||||||||||||||||||||||||| ||||   ||||||||||||    
T  20181130 tcttaaagagagtgacctggtcgtgactcaacctaataacaatttcagtagataatagaatttggaaatccaaatacaacggtttaaaaaatccaaaaac 20181229  T
Q  345 aaca 348  Q
    ||||    
T  20181230 aaca 20181233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 146 - 348
Target Start/End: Original strand, 12041899 - 12042101
Alignment:
Q  146 tgcagtagttaatcgaacagttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacg 245  Q
    |||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||| | || |||||| | ||||||||| ||||||||||||    
T  12041899 tgcagtagttaatcgaacagttgtagctggacttgttttatcctggaggcggcgtggttgatagtttgccttgcatatttttgggcagtgccacgaaacg 12041998  T
Q  246 tcttaaagagagcgacctggtcgtgactca--acctagtaacaacttcggtggataatagaatttggaaatccaaatacaactgtttggaaatccaaaaa 343  Q
    ||||||||||| ||||||||||||||||||  |||||||||||||||| || ||||| | |||||| ||||||||||  ||| ||||| |||||||||||    
T  12041999 tcttaaagagaacgacctggtcgtgactcatgacctagtaacaacttcagtagataacataatttgaaaatccaaat--aacagtttgaaaatccaaaaa 12042096  T
Q  344 caaca 348  Q
    |||||    
T  12042097 caaca 12042101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 162 - 348
Target Start/End: Original strand, 35679858 - 35680047
Alignment:
Q  162 acagttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtcttaaagagagcgac 261  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||| |||| ||||||||||||| | || ||||||||||||||||||||||||||||    
T  35679858 acagttgtagttgagcttgttttatcctggaggcggcgtggttgatagtctgccttgcacaatttttgacagtgccacgaaacgtcttaaagagagcgac 35679957  T
Q  262 ctggtcgtgactcaacctagtaacaacttcggtggataata----gaatttggaaatccaaatacaactgtttggaaatccaaaaacaaca 348  Q
    || | | |||||||||||||||||| ||||||| |||||||    |||||||||||||||||||||||  |||| ||||||||||||||||    
T  35679958 ct-gccatgactcaacctagtaacagcttcggtagataatataatgaatttggaaatccaaatacaacaatttgaaaatccaaaaacaaca 35680047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 11 - 148
Target Start/End: Complemental strand, 558580 - 558443
Alignment:
Q  11 cacagaataattagagagctctaaaaggaacggttaaagtatatcgtgcacgtactgataaagaattattcaatcctttgacgaaaggaattactagaaa 110  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||| |||||||    
T  558580 cacagaatgattagagagctctaaaaggaacggttaaagtatatcgtgcacgtactgataaagaattagccaatcctttgacgaaaggaattgctagaaa 558481  T
Q  111 gaaagtcataaacacatccaataggatgtgactaatgc 148  Q
    ||||||| ||||||||||||| |||||| |||||||||    
T  558480 gaaagtcctaaacacatccaacaggatgggactaatgc 558443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 11 - 148
Target Start/End: Complemental strand, 41998526 - 41998389
Alignment:
Q  11 cacagaataattagagagctctaaaaggaacggttaaagtatatcgtgcacgtactgataaagaattattcaatcctttgacgaaaggaattactagaaa 110  Q
    |||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  41998526 cacagaatgattagagagctctaaaaggaacggttaaagtatatcgtacacgtactgataaagaattagtcaatcctttgacgaaaggaattactagaaa 41998427  T
Q  111 gaaagtcataaacacatccaataggatgtgactaatgc 148  Q
    ||||||| ||||||||||||| | |||| |||||||||    
T  41998426 gaaagtcctaaacacatccaacaagatgggactaatgc 41998389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 146 - 344
Target Start/End: Original strand, 32461516 - 32461702
Alignment:
Q  146 tgcagtagttaatcgaacagttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacg 245  Q
    |||||||||||| || ||||||| || ||  |||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||| |||||    
T  32461516 tgcagtagttaaccgcacagttgcagctgaacttgttttatcctggaggcggcgtggttgatagtctgtcttgcacaattttgggcagtgccacaaaacg 32461615  T
Q  246 tcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtggataatagaatttggaaatccaaatacaactgtttggaaatccaaaaac 344  Q
    ||||||||||||||||||||||||||||||||         |||||||| ||||||||||||| |||||||||||||||   |||||||||||||||||    
T  32461616 tcttaaagagagcgacctggtcgtgactcaac---------acttcggtagataatagaatttagaaatccaaatacaa---tttggaaatccaaaaac 32461702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 106; E-Value: 6e-53
Query Start/End: Original strand, 11 - 136
Target Start/End: Complemental strand, 36425451 - 36425326
Alignment:
Q  11 cacagaataattagagagctctaaaaggaacggttaaagtatatcgtgcacgtactgataaagaattattcaatcctttgacgaaaggaattactagaaa 110  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||| |||||||||||||||||||||||||||||||    
T  36425451 cacagaataattagagagctctaaaaggaacggttaaagtatatcgtgcacgtacaaataaagaattagtcaatcctttgacgaaaggaattactagaaa 36425352  T
Q  111 gaaagtcataaacacatccaatagga 136  Q
     |||||| ||||||||||||||||||    
T  36425351 aaaagtcctaaacacatccaatagga 36425326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 106; E-Value: 6e-53
Query Start/End: Original strand, 11 - 148
Target Start/End: Original strand, 36940474 - 36940611
Alignment:
Q  11 cacagaataattagagagctctaaaaggaacggttaaagtatatcgtgcacgtactgataaagaattattcaatcctttgacgaaaggaattactagaaa 110  Q
    |||||||| |||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||    
T  36940474 cacagaatgattagagagctctaaaagaaacggttaaagtatatcgtgcacgtattgataaagaattagtcaatcctttgacgaaaggaattactagaaa 36940573  T
Q  111 gaaagtcataaacacatccaataggatgtgactaatgc 148  Q
    ||||||| ||||| ||||||| |||||| |||||||||    
T  36940574 gaaagtcctaaacccatccaacaggatgggactaatgc 36940611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 106; E-Value: 6e-53
Query Start/End: Original strand, 11 - 148
Target Start/End: Complemental strand, 39520196 - 39520059
Alignment:
Q  11 cacagaataattagagagctctaaaaggaacggttaaagtatatcgtgcacgtactgataaagaattattcaatcctttgacgaaaggaattactagaaa 110  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||  | ||||||| | |||||||||||||||||||||||||||||||    
T  39520196 cacagaatgattagagagctctaaaaggaacggttaaagtatatcgtgcacgtacgaagaaagaatcagtcaatcctttgacgaaaggaattactagaaa 39520097  T
Q  111 gaaagtcataaacacatccaataggatgtgactaatgc 148  Q
    ||||||| |||||||||||||||||||| |||||||||    
T  39520096 gaaagtcctaaacacatccaataggatgagactaatgc 39520059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 149 - 294
Target Start/End: Original strand, 12102801 - 12102946
Alignment:
Q  149 agtagttaatcgaacagttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtct 248  Q
    ||||||||| || |||||||||||||| ||||||||||||||| | ||| |||||||||| |||  ||||||||||||||| || |||||| ||| ||||    
T  12102801 agtagttaaccgcacagttgtagttggtcttgttttatcctggtgacggtgtggttgatagtcttccttgcacaattttggccagtgccacaaaaagtct 12102900  T
Q  249 taaagagagcgacctggtcgtgactcaacctagtaacaacttcggt 294  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||    
T  12102901 taaagagagcgacctagtcgtgactcaacctagtaacaacttcggt 12102946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 146 - 292
Target Start/End: Original strand, 16116216 - 16116362
Alignment:
Q  146 tgcagtagttaatcgaacagttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacg 245  Q
    ||||||||||||  | || ||||||||||  |||||||||||  ||||| ||||||||||||| | ||||||||||||||||||||| || |||||||||    
T  16116216 tgcagtagttaacagtactgttgtagttgaacttgttttatctaggaggtggcgtggttgatagtttgtcttgcacaattttgggcagtgtcacgaaacg 16116315  T
Q  246 tcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcg 292  Q
    | |||| |||||| |||| ||||||||| ||||||| ||||||||||    
T  16116316 ttttaaggagagcaacctagtcgtgacttaacctagcaacaacttcg 16116362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 183 - 291
Target Start/End: Original strand, 15414885 - 15414993
Alignment:
Q  183 ttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtcttaaagagagcgacctggtcgtgactcaacctagt 282  Q
    |||||||||||||||||||||||||| |||| ||  |||||||||||||| |||||| ||||| |||||||||||||  || |||||||||||||| |||    
T  15414885 ttatcctggaggcggcgtggttgatattctgcctcacacaattttgggcagtgccacaaaacgacttaaagagagcgttctagtcgtgactcaaccaagt 15414984  T
Q  283 aacaacttc 291  Q
    |||||||||    
T  15414985 aacaacttc 15414993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 266 - 348
Target Start/End: Original strand, 37550089 - 37550170
Alignment:
Q  266 tcgtgactcaacctagtaacaacttcggtggataatagaatttggaaatccaaatacaactgtttggaaatccaaaaacaaca 348  Q
    ||||||||||||||| || |||||||||| ||||||||||||||||||||||||||||||  |||| ||||||||||||||||    
T  37550089 tcgtgactcaacctaata-caacttcggtagataatagaatttggaaatccaaatacaacaatttgaaaatccaaaaacaaca 37550170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 148 - 209
Target Start/End: Complemental strand, 4872048 - 4871987
Alignment:
Q  148 cagtagttaatcgaacagttgtagttgggcttgttttatcctggaggcggcgtggttgataa 209  Q
    ||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||    
T  4872048 cagtagttaatcgaacagttgtagttgagcttgttttatcatggaggcggcgtggttgataa 4871987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 179 - 275
Target Start/End: Original strand, 13582690 - 13582785
Alignment:
Q  179 tgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtcttaaagagagcgacctggtcgtgactca 275  Q
    ||||||||||||||| ||||||||||| || |||  ||||||||| || ||| | |||| |||||||||||||||||||||||||||||||||||||    
T  13582690 tgttttatcctggagacggcgtggttgttagtctaccttgcacaaatt-gggtagtgccgcgaaacgtcttaaagagagcgacctggtcgtgactca 13582785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 179 - 275
Target Start/End: Original strand, 24435869 - 24435964
Alignment:
Q  179 tgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtcttaaagagagcgacctggtcgtgactca 275  Q
    ||||||||||||||| |||||||||||||| |||  ||||||||| || ||  | |||| |||||||||||||||||||||||||||||||||||||    
T  24435869 tgttttatcctggagacggcgtggttgatagtctaccttgcacaactt-ggatagtgccgcgaaacgtcttaaagagagcgacctggtcgtgactca 24435964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 179 - 278
Target Start/End: Complemental strand, 7805166 - 7805068
Alignment:
Q  179 tgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtcttaaagagagcgacctggtcgtgactcaacc 278  Q
    ||||||||||||||| ||||||||||| || |||  ||||||||| || ||| | |||| ||||||||||||||||||| ||||||||||||||||||||    
T  7805166 tgttttatcctggagacggcgtggttgttagtctaccttgcacaactt-gggtagtgccgcgaaacgtcttaaagagagggacctggtcgtgactcaacc 7805068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 179 - 278
Target Start/End: Complemental strand, 14374230 - 14374132
Alignment:
Q  179 tgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtcttaaagagagcgacctggtcgtgactcaacc 278  Q
    ||||||||||||||| ||||||||||| || |||  | ||||||| || ||| | |||| ||||||||||||||||||||||||||||||||||||||||    
T  14374230 tgttttatcctggagacggcgtggttgttagtctaccctgcacaactt-gggtagtgccgcgaaacgtcttaaagagagcgacctggtcgtgactcaacc 14374132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 179 - 275
Target Start/End: Complemental strand, 36253921 - 36253826
Alignment:
Q  179 tgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtcttaaagagagcgacctggtcgtgactca 275  Q
    ||||||||||||||||||||| ||||| || |||  ||||||||| || ||  | |||| |||||||||||||||| ||||||||||||||||||||    
T  36253921 tgttttatcctggaggcggcgcggttgctagtctaccttgcacaacttaggt-agtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactca 36253826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 146 - 299
Target Start/End: Complemental strand, 9911280 - 9911128
Alignment:
Q  146 tgcagtagttaatcgaacagttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacg 245  Q
    ||||||| |||| || ||| |||||||||  ||||||||||| | ||| ||||||| ||| || |||| |  |||||||||||  || |||||| ||| |    
T  9911280 tgcagtaattaaccgcacaattgtagttgaacttgttttatcttagag-cggcgtgattggtagtctgccccgcacaattttgaacagtgccacaaaatg 9911182  T
Q  246 tcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtggata 299  Q
    ||||||| ||| |||| | ||| | |||||||||||||||||||||||| ||||    
T  9911181 tcttaaaaagaacgacattgtcctaactcaacctagtaacaacttcggtagata 9911128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 176 - 229
Target Start/End: Original strand, 37550029 - 37550082
Alignment:
Q  176 gcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgg 229  Q
    ||||||||||||||||||| ||||||||||||| |||| |||||||||||||||    
T  37550029 gcttgttttatcctggaggtggcgtggttgatagtctgccttgcacaattttgg 37550082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 179 - 275
Target Start/End: Complemental strand, 17510153 - 17510058
Alignment:
Q  179 tgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtcttaaagagagcgacctggtcgtgactca 275  Q
    ||||||||||||||| ||||| ||||| || |||  ||||||||| || ||  | |||| |||||||||||||||| ||||||||||||||||||||    
T  17510153 tgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggt-agtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactca 17510058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 146 - 279
Target Start/End: Original strand, 13301454 - 13301585
Alignment:
Q  146 tgcagtagttaatcgaacagttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacg 245  Q
    ||||||| |||||||||||| || | | ||||| ||||||||||||||||  |  ||||| || |||  |||||||||||||||| | ||||  ||   |    
T  13301454 tgcagtatttaatcgaacaggtgaactggggct-gttttatcctggaggca-cacggttgttagtctaccttgcacaattttgggtagtgccgtgatttg 13301551  T
Q  246 tcttaaagagagcgacctggtcgtgactcaacct 279  Q
    ||||||||| ||||||||||||||||||||||||    
T  13301552 tcttaaagaaagcgacctggtcgtgactcaacct 13301585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 162 - 263
Target Start/End: Original strand, 18265489 - 18265588
Alignment:
Q  162 acagttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtcttaaagagagcgac 261  Q
    |||||||||| || ||| |||||||| ||| | || ||||||||||| ||||  |||||||||||| |||| || ||| |||||||||||||||||||||    
T  18265489 acagttgtagctgagct-gttttatcatggggacgtcgtggttgatagtctga-ttgcacaattttaggcagtgtcacaaaacgtcttaaagagagcgac 18265586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 178 - 275
Target Start/End: Original strand, 24771356 - 24771452
Alignment:
Q  178 ttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtcttaaagagagcgacctggtcgtgactca 275  Q
    |||||||||||||||| ||||| ||||| || |||  ||||||||| || ||  | |||| |||||| ||||||||| ||||||||||||||||||||    
T  24771356 ttgttttatcctggagacggcgcggttgttagtctaccttgcacaacttaggt-agtgccgcgaaacatcttaaagaaagcgacctggtcgtgactca 24771452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 302 - 346
Target Start/End: Original strand, 12104205 - 12104249
Alignment:
Q  302 agaatttggaaatccaaatacaactgtttggaaatccaaaaacaa 346  Q
    |||||||| |||||||||||||||||||||||||| |||||||||    
T  12104205 agaatttgaaaatccaaatacaactgtttggaaatacaaaaacaa 12104249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 179 - 275
Target Start/End: Complemental strand, 42019668 - 42019573
Alignment:
Q  179 tgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtcttaaagagagcgacctggtcgtgactca 275  Q
    ||||||||||||||| ||||  ||||| || |||  ||||||||| || ||  | |||| |||||||||||||||| ||||||||||||||||||||    
T  42019668 tgttttatcctggagacggcacggttgctagtctaccttgcacaacttaggt-agtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactca 42019573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 178 - 284
Target Start/End: Original strand, 1414050 - 1414155
Alignment:
Q  178 ttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtcttaaagagagcgacctggtcgtgactcaac 277  Q
    |||||||||| ||||| ||||| ||||| || |||  ||||||||| || ||  | |||| |||||||||||||||| ||||||||| |||||||||| |    
T  1414050 ttgttttatcttggagacggcgcggttgctagtctaccttgcacaacttaggt-agtgccgcgaaacgtcttaaagaaagcgacctgatcgtgactcacc 1414148  T
Q  278 ctagtaa 284  Q
    | |||||    
T  1414149 ccagtaa 1414155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 234 - 275
Target Start/End: Complemental strand, 26709143 - 26709102
Alignment:
Q  234 tgccacgaaacgtcttaaagagagcgacctggtcgtgactca 275  Q
    |||| |||||||||||||||| ||||||||||||||||||||    
T  26709143 tgccgcgaaacgtcttaaagaaagcgacctggtcgtgactca 26709102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 234 - 275
Target Start/End: Complemental strand, 26978877 - 26978836
Alignment:
Q  234 tgccacgaaacgtcttaaagagagcgacctggtcgtgactca 275  Q
    |||| |||||||||||||||| ||||||||||||||||||||    
T  26978877 tgccgcgaaacgtcttaaagaaagcgacctggtcgtgactca 26978836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 179 - 275
Target Start/End: Complemental strand, 17505048 - 17504953
Alignment:
Q  179 tgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtcttaaagagagcgacctggtcgtgactca 275  Q
    ||||||||||||||| || || ||||| || |||  ||||||||| || ||  | |||| |||||||||||||||| | ||||||||||||||||||    
T  17505048 tgttttatcctggagacgacgcggttgctagtctaccttgcacaacttaggt-agtgccgcgaaacgtcttaaagaaaacgacctggtcgtgactca 17504953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 239 - 275
Target Start/End: Complemental strand, 41853584 - 41853548
Alignment:
Q  239 cgaaacgtcttaaagagagcgacctggtcgtgactca 275  Q
    |||||||||||||||| ||||||||||||||||||||    
T  41853584 cgaaacgtcttaaagaaagcgacctggtcgtgactca 41853548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 234 - 284
Target Start/End: Original strand, 24776869 - 24776919
Alignment:
Q  234 tgccacgaaacgtcttaaagagagcgacctggtcgtgactcaacctagtaa 284  Q
    |||| |||||||||||||||| |||||| ||||||||||||| || |||||    
T  24776869 tgccgcgaaacgtcttaaagaaagcgacatggtcgtgactcaccccagtaa 24776919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 178 - 259
Target Start/End: Original strand, 1286265 - 1286344
Alignment:
Q  178 ttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtcttaaagagagcg 259  Q
    |||||||||| ||||| || ||||||| |||||||   |||||||||||| |||| |||||| ||| |||||||||||||||    
T  1286265 ttgttttatcatggagacgtcgtggttaataatctag-ttgcacaattttcggcaatgccac-aaatgtcttaaagagagcg 1286344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 299 - 344
Target Start/End: Complemental strand, 9496759 - 9496714
Alignment:
Q  299 aatagaatttggaaatccaaatacaactgtttggaaatccaaaaac 344  Q
    ||||||||||| |||| |||||| ||| ||||||||||||||||||    
T  9496759 aatagaatttgaaaattcaaatataacggtttggaaatccaaaaac 9496714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 245 - 278
Target Start/End: Complemental strand, 31731573 - 31731540
Alignment:
Q  245 gtcttaaagagagcgacctggtcgtgactcaacc 278  Q
    |||||||||| |||||||||||||||||||||||    
T  31731573 gtcttaaagaaagcgacctggtcgtgactcaacc 31731540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 177; Significance: 3e-95; HSPs: 2)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 177; E-Value: 3e-95
Query Start/End: Original strand, 146 - 350
Target Start/End: Complemental strand, 4202 - 3998
Alignment:
Q  146 tgcagtagttaatcgaacagttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacg 245  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||| |||||||||| |    
T  4202 tgcagtagttaatcgaacagttgtagctgggcttgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttgggcagtgccacgaaatg 4103  T
Q  246 tcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtggataatagaatttggaaatccaaatacaactgtttggaaatccaaaaaca 345  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||    
T  4102 tcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtagataatagaatttggaaatccaaatacaacagtttggaaatccaaaaaca 4003  T
Q  346 acaga 350  Q
    |||||    
T  4002 acaga 3998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #2
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 151 - 348
Target Start/End: Original strand, 443917 - 444101
Alignment:
Q  151 tagttaatcgaacagttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtctta 250  Q
    ||||||| || |||||||||| ||||||||||||||||| ||| |||||||||||||| |||| ||||||||||||| |||| |||||||||||||        
T  443917 tagttaaccgcacagttgtagctgggcttgttttatcct-gagacggcgtggttgatagtctgccttgcacaatttt-ggcagtgccacgaaacgt---- 444010  T
Q  251 aagagagcgacctggtcgtgactcaacctagtaacaacttcggtggataatagaatttggaaatccaaatacaactgtttggaaatccaaaaacaaca 348  Q
           |||| | ||||||| ||||||||||||||||||||||  ||||||||||||| |||| |||||||||  ||||  ||||||||||||||||    
T  444011 -------cgacttcgtcgtgattcaacctagtaacaacttcggtaaataatagaatttgaaaatacaaatacaagagtttaaaaatccaaaaacaaca 444101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 176; Significance: 1e-94; HSPs: 78)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 176; E-Value: 1e-94
Query Start/End: Original strand, 146 - 353
Target Start/End: Complemental strand, 3672712 - 3672505
Alignment:
Q  146 tgcagtagttaatcgaacagttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacg 245  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||| ||||| ||||||    
T  3672712 tgcagtagttaatcgaacagttgtagctgggcttgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttgggcagtgccatgaaacg 3672613  T
Q  246 tcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtggataatagaatttggaaatccaaatacaactgtttggaaatccaaaaaca 345  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||    
T  3672612 tcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtagataatagaatttggaaatccaaatacaacagtttggaaatccaaaaaca 3672513  T
Q  346 acagaact 353  Q
    ||| ||||    
T  3672512 acaaaact 3672505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 175; E-Value: 4e-94
Query Start/End: Original strand, 146 - 348
Target Start/End: Complemental strand, 3692744 - 3692542
Alignment:
Q  146 tgcagtagttaatcgaacagttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacg 245  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||| ||||| ||||||    
T  3692744 tgcagtagttaatcgaacagttgtagctgggcttgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttgggcagtgccatgaaacg 3692645  T
Q  246 tcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtggataatagaatttggaaatccaaatacaactgtttggaaatccaaaaaca 345  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||    
T  3692644 tcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtagataatagaatttggaaatccaaatacaacagtttggaaatccaaaaaca 3692545  T
Q  346 aca 348  Q
    |||    
T  3692544 aca 3692542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 173; E-Value: 6e-93
Query Start/End: Original strand, 146 - 350
Target Start/End: Original strand, 39775695 - 39775899
Alignment:
Q  146 tgcagtagttaatcgaacagttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacg 245  Q
    |||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||| |||| |||||||||||||||||| ||||||||||||    
T  39775695 tgcagtagttaatcgaacagttgtagctgagcttgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttgggcagtgccacgaaacg 39775794  T
Q  246 tcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtggataatagaatttggaaatccaaatacaactgtttggaaatccaaaaaca 345  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||    
T  39775795 tcttaaagagagcgacctggtcgtgactcaacctagtagcaacttcggtagataatagaatttggaaatccaaatacaacagtttggaaatccaaaaaca 39775894  T
Q  346 acaga 350  Q
    |||||    
T  39775895 acaga 39775899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 167; E-Value: 2e-89
Query Start/End: Original strand, 146 - 348
Target Start/End: Original strand, 7571185 - 7571387
Alignment:
Q  146 tgcagtagttaatcgaacagttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacg 245  Q
    |||||||||||| || |||||||||| || |||||||||||||||||||||||||| |||||| ||||||||||||||||||||||| ||||||||||||    
T  7571185 tgcagtagttaaccgcacagttgtagctgagcttgttttatcctggaggcggcgtgattgatagtctgtcttgcacaattttgggcagtgccacgaaacg 7571284  T
Q  246 tcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtggataatagaatttggaaatccaaatacaactgtttggaaatccaaaaaca 345  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||    
T  7571285 tcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtagataatagaatttggaaatccaaatacaacagtttggaaatccaaaaaca 7571384  T
Q  346 aca 348  Q
    |||    
T  7571385 aca 7571387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 159; E-Value: 1e-84
Query Start/End: Original strand, 146 - 348
Target Start/End: Complemental strand, 18467351 - 18467149
Alignment:
Q  146 tgcagtagttaatcgaacagttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacg 245  Q
    ||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||| ||| |||| |||||||||||||||||| ||||||||||||    
T  18467351 tgcagtagttaatcgaacaattgtagttggacttgttttatcctggaggcggcgtggttaatagtctgccttgcacaattttgggcagtgccacgaaacg 18467252  T
Q  246 tcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtggataatagaatttggaaatccaaatacaactgtttggaaatccaaaaaca 345  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||| | |||||||||| ||||||||    
T  18467251 tcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtagataatagaatttgaaaatccaaatacatcagtttggaaattcaaaaaca 18467152  T
Q  346 aca 348  Q
    |||    
T  18467151 aca 18467149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 159; E-Value: 1e-84
Query Start/End: Original strand, 146 - 348
Target Start/End: Original strand, 23666090 - 23666292
Alignment:
Q  146 tgcagtagttaatcgaacagttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacg 245  Q
    |||| ||||||| || ||||||| || |||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||| ||||||||||||    
T  23666090 tgcattagttaaccgcacagttgcagctgggcttgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttgggcagtgccacgaaacg 23666189  T
Q  246 tcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtggataatagaatttggaaatccaaatacaactgtttggaaatccaaaaaca 345  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||| ||||||||    
T  23666190 tcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtagataatagaatttggaaatccaaatacaacagtttggaaattcaaaaaca 23666289  T
Q  346 aca 348  Q
    |||    
T  23666290 aca 23666292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 159; E-Value: 1e-84
Query Start/End: Original strand, 146 - 348
Target Start/End: Original strand, 24038338 - 24038540
Alignment:
Q  146 tgcagtagttaatcgaacagttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacg 245  Q
    |||| ||||||| || ||||||| || |||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||| ||||||||||||    
T  24038338 tgcattagttaaccgcacagttgcagctgggcttgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttgggcagtgccacgaaacg 24038437  T
Q  246 tcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtggataatagaatttggaaatccaaatacaactgtttggaaatccaaaaaca 345  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||| ||||||||    
T  24038438 tcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtagataatagaatttggaaatccaaatacaacagtttggaaattcaaaaaca 24038537  T
Q  346 aca 348  Q
    |||    
T  24038538 aca 24038540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 156; E-Value: 9e-83
Query Start/End: Original strand, 146 - 348
Target Start/End: Complemental strand, 8069805 - 8069603
Alignment:
Q  146 tgcagtagttaatcgaacagttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacg 245  Q
    |||||||||||| || ||||||| || |||||||||||||||||||||||||||||||||||| ||||||||||||||||| || || ||||||||||||    
T  8069805 tgcagtagttaaccgcacagttgcagctgggcttgttttatcctggaggcggcgtggttgatagtctgtcttgcacaattt-ggacagtgccacgaaacg 8069707  T
Q  246 tcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtggat-aatagaatttggaaatccaaatacaactgtttggaaatccaaaaac 344  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  8069706 tcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtagataaatagaatttggaaatccaaatacaactgtttggaaatccaaaaac 8069607  T
Q  345 aaca 348  Q
    ||||    
T  8069606 aaca 8069603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 155; E-Value: 3e-82
Query Start/End: Original strand, 146 - 348
Target Start/End: Complemental strand, 8883296 - 8883094
Alignment:
Q  146 tgcagtagttaatcgaacagttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacg 245  Q
    |||||||||||| || ||||||| || ||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||| ||||||||||||    
T  8883296 tgcagtagttaaccgcacagttgcagctgggcttgttttatcctggaggcagcgtggttgatagtctgtcttgcacaattttgggcagtgccacgaaacg 8883197  T
Q  246 tcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtggataatagaatttggaaatccaaatacaactgtttggaaatccaaaaaca 345  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||| ||||||||||||||| |||||||||||||||| ||    
T  8883196 tcttaaagagagcgacctggtcgtgactcgacctagtaacaacttcggtagataatagaatttgaaaatccaaatacaacagtttggaaatccaaaatca 8883097  T
Q  346 aca 348  Q
    |||    
T  8883096 aca 8883094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 154; E-Value: 1e-81
Query Start/End: Original strand, 146 - 343
Target Start/End: Original strand, 758335 - 758532
Alignment:
Q  146 tgcagtagttaatcgaacagttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacg 245  Q
    |||||||||||| || ||||||| || |||||||||||||||||||||||||||||||||||| |||| |||||||||||||||| | ||||||||||||    
T  758335 tgcagtagttaaccgcacagttgcagctgggcttgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttgggtagtgccacgaaacg 758434  T
Q  246 tcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtggataatagaatttggaaatccaaatacaactgtttggaaatccaaaaa 343  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||    
T  758435 tcttaaagagagcgatctggtcgtgactcaacctagtaacaacttcggtagataatagaatttggaaatccaaatacaacagtttggaaatccaaaaa 758532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 154; E-Value: 1e-81
Query Start/End: Original strand, 146 - 343
Target Start/End: Complemental strand, 3033770 - 3033573
Alignment:
Q  146 tgcagtagttaatcgaacagttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacg 245  Q
    |||||||||||||||||||||||||| || |||||||||||||| ||||||| |||||||||| |||| |||||||||||||||||| ||||| ||||||    
T  3033770 tgcagtagttaatcgaacagttgtagctgagcttgttttatccttgaggcggtgtggttgatagtctgccttgcacaattttgggcagtgccatgaaacg 3033671  T
Q  246 tcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtggataatagaatttggaaatccaaatacaactgtttggaaatccaaaaa 343  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| || |||||||||||||||||    
T  3033670 tcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtagataatagaatttggaaatccaaatactacagtttggaaatccaaaaa 3033573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 149; E-Value: 1e-78
Query Start/End: Original strand, 144 - 348
Target Start/End: Complemental strand, 18472135 - 18471932
Alignment:
Q  144 aatgcagtagttaatcgaacagttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaa 243  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||| ||||||||||||| |||| |||||||||     
T  18472135 aatgcagtagttaatcgaacagttgtagctgggcttgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttaggcagtgccacgaa- 18472037  T
Q  244 cgtcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtggataatagaatttggaaatccaaatacaactgtttggaaatccaaaaa 343  Q
    | || |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| | |||| ||||| ||||||    
T  18472036 catcgtaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtagataatagaatttggaaatccaaatacatcagtttagaaattcaaaaa 18471937  T
Q  344 caaca 348  Q
    |||||    
T  18471936 caaca 18471932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 146 - 348
Target Start/End: Original strand, 14438662 - 14438864
Alignment:
Q  146 tgcagtagttaatcgaacagttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacg 245  Q
    |||||||||||| || ||||||| || |||||||||||||||||||||||||||||||||||  |||| |||||||||||||||| | ||||||||||||    
T  14438662 tgcagtagttaaccgcacagttgcagctgggcttgttttatcctggaggcggcgtggttgattgtctgccttgcacaattttgggtagtgccacgaaacg 14438761  T
Q  246 tcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtggataatagaatttggaaatccaaatacaactgtttggaaatccaaaaaca 345  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||| |||||| ||||||||||||    
T  14438762 tcttaaagagggcgacctggtcgtgactcaacctagtaacaacttcggtagataatagaacttggaaatccaaatacaacagtttgggaatccaaaaaca 14438861  T
Q  346 aca 348  Q
    |||    
T  14438862 aca 14438864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 145; E-Value: 3e-76
Query Start/End: Original strand, 145 - 348
Target Start/End: Complemental strand, 3419122 - 3418918
Alignment:
Q  145 atgcagtagttaatcgaacagttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaac 244  Q
    ||||| ||||||| || ||||||| ||||| ||||||||||||||| ||| ||||||||||||| |||| |||||||||||||||||| |||||||||||    
T  3419122 atgcaatagttaaccgcacagttgcagttgagcttgttttatcctgaaggtggcgtggttgatagtctgccttgcacaattttgggcagtgccacgaaac 3419023  T
Q  245 gtcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtggataatagaatttggaaatccaaatacaactgtttggaaat-ccaaaaa 343  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||| |||||||    
T  3419022 gtcttaaagagagcgacttggtcgtgactcaacctagtaacaacttcggtagataatagaatttggaaatccaaatacaacagtttggaaataccaaaaa 3418923  T
Q  344 caaca 348  Q
    |||||    
T  3418922 caaca 3418918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 149 - 348
Target Start/End: Complemental strand, 8888053 - 8887854
Alignment:
Q  149 agtagttaatcgaacagttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtct 248  Q
    ||||||||| || ||||||| || |||  |||||||||||||||||||||||||||||||||||||||||||||||||||| || ||| || ||||||||    
T  8888053 agtagttaaccgcacagttgcagctggatttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttggacagtgcaacaaaacgtct 8887954  T
Q  249 taaagagagcgacctggtcgtgactcaacctagtaacaacttcggtggataatagaatttggaaatccaaatacaactgtttggaaatccaaaaacaaca 348  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||| |||||||||||||||| |||||    
T  8887953 taaagagagcgacctggtcgtgactcaacctagtaacaacttcggtagataatagaatttggaaattcaaatacaacagtttggaaatccaaaatcaaca 8887854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 162 - 349
Target Start/End: Complemental strand, 29350350 - 29350163
Alignment:
Q  162 acagttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtcttaaagagagcgac 261  Q
    ||||||||||||| ||||||||||||||||||||||| |||| |||  |||| |||||||||||||||||| ||||||||||||||||||||| ||||||    
T  29350350 acagttgtagttgagcttgttttatcctggaggcggcatggtagatggtctgccttgcacaattttgggcagtgccacgaaacgtcttaaagaaagcgac 29350251  T
Q  262 ctggtcgtgactcaacctagtaacaacttcggtggataatagaatttggaaatccaaatacaactgtttggaaatccaaaaacaacag 349  Q
     |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  29350250 atggtcgtgactcaacctagtaacaacttcggtagataatagaatttggaaatccaaatacaacagtttggaaatccaaaaacaacag 29350163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 141; E-Value: 8e-74
Query Start/End: Original strand, 146 - 346
Target Start/End: Original strand, 12965840 - 12966040
Alignment:
Q  146 tgcagtagttaatcgaacagttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacg 245  Q
    |||| |||||||||||||| |||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||  |||||    
T  12965840 tgcattagttaatcgaacaattgtagttggacttgttttatcctggaggcggcgtggttgatagtctgtcttgcacaattttgggcagtgccataaaacg 12965939  T
Q  246 tcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtggataatagaatttggaaatccaaatacaactgtttggaaatccaaaaaca 345  Q
    ||||||||||||||||||||| ||||||||| ||||||||||||||||| ||| |||||||||||||| ||||||||||| ||||| |||| ||||||||    
T  12965940 tcttaaagagagcgacctggttgtgactcaatctagtaacaacttcggtagatcatagaatttggaaacccaaatacaacggtttgaaaattcaaaaaca 12966039  T
Q  346 a 346  Q
    |    
T  12966040 a 12966040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 146 - 325
Target Start/End: Original strand, 32474647 - 32474824
Alignment:
Q  146 tgcagtagttaatcgaacagttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacg 245  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||| ||||||||||||    
T  32474647 tgcagtagttaatcgaacagttgtagctgggcttgttttatcctggagacggcgtggttgatagtctgtcttgcacaattttgggcagtgccacgaaacg 32474746  T
Q  246 tcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtggataatagaatttggaaatccaaatacaac 325  Q
    ||||  ||||||||||||||||||| ||||| ||||||||||||||||| |||||||||||||||||||||||| |||||    
T  32474747 tctt--agagagcgacctggtcgtggctcaatctagtaacaacttcggtagataatagaatttggaaatccaaaaacaac 32474824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 136; E-Value: 8e-71
Query Start/End: Original strand, 146 - 345
Target Start/End: Complemental strand, 55431441 - 55431242
Alignment:
Q  146 tgcagtagttaatcgaacagttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacg 245  Q
    |||||||||||| || |||||||||| ||| |||||||||||||||||||||||||||||||| |||| |||||| |||||| | || || |||||||||    
T  55431441 tgcagtagttaaccgcacagttgtagctggacttgttttatcctggaggcggcgtggttgatagtctgccttgcataatttttgacagtgtcacgaaacg 55431342  T
Q  246 tcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtggataatagaatttggaaatccaaatacaactgtttggaaatccaaaaaca 345  Q
    ||||||||||||||||||| ||||||||||||||| |||||||||| |  ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  55431341 tcttaaagagagcgacctgatcgtgactcaacctaataacaacttcagcagataatagaatttggaaatccaaatacaactgtttggaaatccaaaaaca 55431242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 133; E-Value: 5e-69
Query Start/End: Original strand, 148 - 348
Target Start/End: Complemental strand, 20520178 - 20519978
Alignment:
Q  148 cagtagttaatcgaacagttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtc 247  Q
    |||||||||| || |||||||||| ||| ||||||||||| |||||||||||||||||||| |||  |||||||||| ||||||| ||||||||||||||    
T  20520178 cagtagttaaccgcacagttgtagctggacttgttttatcttggaggcggcgtggttgatagtctcccttgcacaatcttgggcagtgccacgaaacgtc 20520079  T
Q  248 ttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtggataatagaatttggaaatccaaatacaactgtttggaaatccaaaaacaac 347  Q
    |||||||||| |||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||| ||||| |||| | ||||||||    
T  20520078 ttaaagagagtgacctggtcgtgactcaacctagtaacaacttcgctagataatagaatttggaaatccaaatacaacagtttgaaaattcgaaaacaac 20519979  T
Q  348 a 348  Q
    |    
T  20519978 a 20519978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 149 - 352
Target Start/End: Original strand, 49971394 - 49971597
Alignment:
Q  149 agtagttaatcgaacagttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtct 248  Q
    |||||||||  | ||||||| || ||| ||||||||||||||||||||||||| |||||| |||| |||||||||||||||  | |||||||||||||||    
T  49971394 agtagttaactgcacagttgcagctggacttgttttatcctggaggcggcgtgattgatagtctgccttgcacaattttggatagtgccacgaaacgtct 49971493  T
Q  249 taaagagagcgacctggtcgtgactcaacctagtaacaacttcggtggataatagaatttggaaatccaaatacaactgtttggaaatccaaaaacaaca 348  Q
    |||||||| ||||||||||||||||||||||||||||||||||||| ||||||| || ||||||||||||||||||| |||||||||||||||||||| |    
T  49971494 taaagagatcgacctggtcgtgactcaacctagtaacaacttcggtagataataaaacttggaaatccaaatacaacagtttggaaatccaaaaacaaga 49971593  T
Q  349 gaac 352  Q
    ||||    
T  49971594 gaac 49971597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 144 - 292
Target Start/End: Original strand, 12971598 - 12971746
Alignment:
Q  144 aatgcagtagttaatcgaacagttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaa 243  Q
    ||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||| ||||||||||    
T  12971598 aatgcagtagttaattgaacagttgtagttgggcttgttttatcctagaggcggcgtgattgataatctgtcttgcacaattttgggcaatgccacgaaa 12971697  T
Q  244 cgtcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcg 292  Q
    |||||||||||||| ||||||||||||| ||||||||||||||||||||    
T  12971698 cgtcttaaagagagagacctggtcgtgagtcaacctagtaacaacttcg 12971746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 146 - 348
Target Start/End: Original strand, 3657207 - 3657409
Alignment:
Q  146 tgcagtagttaatcgaacagttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacg 245  Q
    |||||||||||||| ||||||||||| ||| ||||||||||| |||||| ||| ||||||||| |||||||||||||||||||  || ||||||||||||    
T  3657207 tgcagtagttaatctaacagttgtagctggacttgttttatcttggaggtggcatggttgatagtctgtcttgcacaattttgaacagtgccacgaaacg 3657306  T
Q  246 tcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtggataatagaatttggaaatccaaatacaactgtttggaaatccaaaaaca 345  Q
    ||||||||||||||| ||  |||||||||||| |||||||||||||||| ||||||||||||| ||||| |||||||||| ||||| ||||||||| |||    
T  3657307 tcttaaagagagcgatctaatcgtgactcaacatagtaacaacttcggtagataatagaatttagaaattcaaatacaacagtttgaaaatccaaacaca 3657406  T
Q  346 aca 348  Q
    |||    
T  3657407 aca 3657409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 11 - 148
Target Start/End: Complemental strand, 8885054 - 8884917
Alignment:
Q  11 cacagaataattagagagctctaaaaggaacggttaaagtatatcgtgcacgtactgataaagaattattcaatcctttgacgaaaggaattactagaaa 110  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  8885054 cacagaatgattagagagctctaaaaggaacggttaaagtatatcgtgcacgtactgataaagaattagtcaatcctttgacgaaaggaattactagaaa 8884955  T
Q  111 gaaagtcataaacacatccaataggatgtgactaatgc 148  Q
    ||||||| |||||||||||||||||||| |||||||||    
T  8884954 gaaagtcctaaacacatccaataggatgggactaatgc 8884917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 121; E-Value: 7e-62
Query Start/End: Original strand, 146 - 346
Target Start/End: Complemental strand, 29715770 - 29715570
Alignment:
Q  146 tgcagtagttaatcgaacagttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacg 245  Q
    |||| ||||||| || |||| ||||| ||| ||||||||||||| |||||||||||||||||| |||  || |||||||||||| || || |||||||||    
T  29715770 tgcaatagttaaccgcacagctgtagctggacttgttttatcctagaggcggcgtggttgatagtcttcctagcacaattttggacagtgtcacgaaacg 29715671  T
Q  246 tcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtggataatagaatttggaaatccaaatacaactgtttggaaatccaaaaaca 345  Q
    ||||||| ||||||| ||||||||||||||||||| ||||||||||||| |||||||||||||||||||| ||||||||| |||||||||||||||||||    
T  29715670 tcttaaaaagagcgatctggtcgtgactcaacctaataacaacttcggtagataatagaatttggaaatctaaatacaacagtttggaaatccaaaaaca 29715571  T
Q  346 a 346  Q
    |    
T  29715570 a 29715570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 146 - 348
Target Start/End: Original strand, 23661431 - 23661619
Alignment:
Q  146 tgcagtagttaatcgaacagttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacg 245  Q
    |||| ||||||| || ||||||| || |||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||| |||||||||       
T  23661431 tgcattagttaaccgcacagttgcagctgggcttgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttgggcagtgccacgaa--- 23661527  T
Q  246 tcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtggataatagaatttggaaatccaaatacaactgtttggaaatccaaaaaca 345  Q
               |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||| ||||||||    
T  23661528 -----------gcgacctggtcgtgactcaacctagtaacaacttcggtagataatagaatttggaaatccaaatacaacagtttggaaattcaaaaaca 23661616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 11 - 148
Target Start/End: Complemental strand, 18469023 - 18468886
Alignment:
Q  11 cacagaataattagagagctctaaaaggaacggttaaagtatatcgtgcacgtactgataaagaattattcaatcctttgacgaaaggaattactagaaa 110  Q
    |||||||| |||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||| ||||||||||||||||||    
T  18469023 cacagaatgattaaagagctctaaaaggaacggttaaagtatattgtgcacgtactgataaagaattaatcaatcctttgatgaaaggaattactagaaa 18468924  T
Q  111 gaaagtcataaacacatccaataggatgtgactaatgc 148  Q
    ||||||| |||||||||||||||||||| |||||||||    
T  18468923 gaaagtcctaaacacatccaataggatgggactaatgc 18468886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 11 - 148
Target Start/End: Original strand, 23664406 - 23664543
Alignment:
Q  11 cacagaataattagagagctctaaaaggaacggttaaagtatatcgtgcacgtactgataaagaattattcaatcctttgacgaaaggaattactagaaa 110  Q
    |||||||| ||||||||||||||||||||| ||||||||||||||||||||||||| |||||| |||| |||||||||||||||||||||||||||||||    
T  23664406 cacagaatgattagagagctctaaaaggaatggttaaagtatatcgtgcacgtactaataaagcattagtcaatcctttgacgaaaggaattactagaaa 23664505  T
Q  111 gaaagtcataaacacatccaataggatgtgactaatgc 148  Q
    ||||||| |||||||||||||||||||| |||||||||    
T  23664506 gaaagtcctaaacacatccaataggatgggactaatgc 23664543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 11 - 148
Target Start/End: Complemental strand, 3674451 - 3674313
Alignment:
Q  11 cacagaataattagagagctctaaaaggaacggttaaagtatatcgtgcacgtactgataaa-gaattattcaatcctttgacgaaaggaattactagaa 109  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||| ||||||||||||||||||||||||||||||    
T  3674451 cacagaatgattagagagctctaaaaggaacggttaaagtatatcgtgcacgtattgataaaagaattagtcaatcctttgacgaaaggaattactagaa 3674352  T
Q  110 agaaagtcataaacacatccaataggatgtgactaatgc 148  Q
    |||||||| ||||||||||||| |||||| |||||||||    
T  3674351 agaaagtcctaaacacatccaacaggatgggactaatgc 3674313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 166 - 348
Target Start/End: Original strand, 12112628 - 12112822
Alignment:
Q  166 ttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtcttaaagagagcgacctgg 265  Q
    ||||||||| |||||||||||||||||||||| |||||||||| |||||||||||||| ||||| || |||||||||||||||||||||||||||||| |    
T  12112628 ttgtagttgagcttgttttatcctggaggcggtgtggttgatagtctgtcttgcacaactttggacagtgccacgaaacgtcttaaagagagcgacctag 12112727  T
Q  266 tcgtgactcaacctagtaacaacttcggtggat------------aatagaatttggaaatccaaatacaactgtttggaaatccaaaaacaaca 348  Q
    |||||| |||||||||||||||||||||| |||            ||||||||||| ||||||||||||||| ||||| ||||| ||||||||||    
T  12112728 tcgtgattcaacctagtaacaacttcggtagatattcctttttaaaatagaatttgaaaatccaaatacaacggtttgtaaatcaaaaaacaaca 12112822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 222 - 349
Target Start/End: Complemental strand, 27708928 - 27708802
Alignment:
Q  222 aattttgggcattgccacgaaacgtcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtggataatagaatttggaaatccaaata 321  Q
    ||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||    
T  27708928 aattttgggcagtgccacgaaacgtcttaaagagaacgacctggtcgtgactcaacctagtaacaacttcggtatataatagaatttggaaatccaaata 27708829  T
Q  322 caactgtttggaaatccaaaaacaacag 349  Q
    |||| |||||||||| ||||||||||||    
T  27708828 caacagtttggaaat-caaaaacaacag 27708802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 33 - 148
Target Start/End: Original strand, 12970116 - 12970231
Alignment:
Q  33 aaaaggaacggttaaagtatatcgtgcacgtactgataaagaattattcaatcctttgacgaaaggaattactagaaagaaagtcataaacacatccaat 132  Q
    |||||||| |||||||| | | | || ||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||  |||||| |||||||    
T  12970116 aaaaggaatggttaaagcagagcatgtacgtactgataaagaattagtcaatcctttgacgaaaggaattactggaaagaaagtactaaacatatccaat 12970215  T
Q  133 aggatgtgactaatgc 148  Q
    |||||| |||||||||    
T  12970216 aggatgggactaatgc 12970231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 146 - 249
Target Start/End: Complemental strand, 27709062 - 27708959
Alignment:
Q  146 tgcagtagttaatcgaacagttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacg 245  Q
    |||||||||||| || ||||||| || |||||||||||||||||||||||||||||||||||| |||  |||||| ||||||||||| ||||| ||||||    
T  27709062 tgcagtagttaaccgcacagttgaagctgggcttgttttatcctggaggcggcgtggttgatagtctaccttgcataattttgggcagtgccatgaaacg 27708963  T
Q  246 tctt 249  Q
    ||||    
T  27708962 tctt 27708959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 148 - 292
Target Start/End: Complemental strand, 28125242 - 28125097
Alignment:
Q  148 cagtagttaatcgaacagttgtagttgggcttgtttt--atcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacg 245  Q
    |||||||| | || ||| |||||||||  ||||||||  ||||||||||| | |||||| ||| ||||||||||||||||||  ||| |||||||||| |    
T  28125242 cagtagttgaccgcacaattgtagttgaacttgtttttaatcctggaggcagtgtggttaatagtctgtcttgcacaattttaagcagtgccacgaaatg 28125143  T
Q  246 tcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcg 292  Q
    ||||||| ||||| |||||||||||||||||||||||||||| ||||    
T  28125142 tcttaaa-agagcaacctggtcgtgactcaacctagtaacaatttcg 28125097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 234 - 348
Target Start/End: Original strand, 2207762 - 2207876
Alignment:
Q  234 tgccacgaaacgtcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtggataatagaatttggaaatccaaatacaactgtttgga 333  Q
    |||||| |||||||||||| ||||||||||||||||||||||| ||||| ||||||||| |  ||||||||||||  |||| |||||||||| ||||  |    
T  2207762 tgccactaaacgtcttaaaaagagcgacctggtcgtgactcaatctagtgacaacttcgataaataatagaatttaaaaattcaaatacaacagtttaaa 2207861  T
Q  334 aatccaaaaacaaca 348  Q
    |||||||||||||||    
T  2207862 aatccaaaaacaaca 2207876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 179 - 284
Target Start/End: Complemental strand, 26962154 - 26962050
Alignment:
Q  179 tgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtcttaaagagagcgacctggtcgtgactcaacc 278  Q
    ||||||||||||||| ||||||| ||| || |||  ||||||||| || | | | ||||||||||||||||||||||||||| |||||||||||||||||    
T  26962154 tgttttatcctggagacggcgtgtttgttagtctaccttgcacaactt-gtgtagtgccacgaaacgtcttaaagagagcgatctggtcgtgactcaacc 26962056  T
Q  279 tagtaa 284  Q
     |||||    
T  26962055 cagtaa 26962050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 179 - 278
Target Start/End: Complemental strand, 13022122 - 13022024
Alignment:
Q  179 tgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtcttaaagagagcgacctggtcgtgactcaacc 278  Q
    ||||||||||||||| ||||||||||| || |||  ||||||||| || ||| | |||| |||||||| ||||| |||||||||||||||||||||||||    
T  13022122 tgttttatcctggagacggcgtggttgttagtctaccttgcacaactt-gggtagtgccgcgaaacgttttaaaaagagcgacctggtcgtgactcaacc 13022024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 146 - 291
Target Start/End: Complemental strand, 20507779 - 20507637
Alignment:
Q  146 tgcagtagttaatcgaacagttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacg 245  Q
    ||||||||||||||| |||  | | ||||| ||||||||||||| |||| || |||||||||| |||| |||||||||||||| ||| |||||| |||||    
T  20507779 tgcagtagttaatcgcacaactattgttggtcttgttttatcctagaggtggtgtggttgatagtctgccttgcacaattttgagcagtgccaccaaacg 20507680  T
Q  246 tcttaaagagagcgacctggtcgtgactcaacctagtaacaacttc 291  Q
       ||||||||| ||||||| | || || |||| ||||| ||||||    
T  20507679 ---taaagagagtgacctggccatgcctaaaccaagtaataacttc 20507637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 216 - 283
Target Start/End: Original strand, 25726830 - 25726897
Alignment:
Q  216 ttgcacaattttgggcattgccacgaaacgtcttaaagagagcgacctggtcgtgactcaacctagta 283  Q
    |||||||||| |||| | |||| |||||||||||||||||||||||||||||||||||||| ||||||    
T  25726830 ttgcacaattctgggtagtgccgcgaaacgtcttaaagagagcgacctggtcgtgactcaatctagta 25726897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 179 - 278
Target Start/End: Original strand, 33089343 - 33089441
Alignment:
Q  179 tgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtcttaaagagagcgacctggtcgtgactcaacc 278  Q
    ||||||||||| ||| ||||||||||| || |||  ||||||||| |  ||| | |||| ||||||||||||||||||||||||||||||||||||||||    
T  33089343 tgttttatcctagagacggcgtggttgttagtctaccttgcacaacta-gggtagtgccgcgaaacgtcttaaagagagcgacctggtcgtgactcaacc 33089441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 162 - 284
Target Start/End: Complemental strand, 48432519 - 48432398
Alignment:
Q  162 acagttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtcttaaagagagcgac 261  Q
    |||||||||| | |||| |||||||| ||| | || ||||||||||| ||||| || |||||||||||||| |||||| |||||||||||||||||||||    
T  48432519 acagttgtagctaggct-gttttatcttggggacgtcgtggttgatagtctgtttt-cacaattttgggcagtgccacaaaacgtcttaaagagagcgac 48432422  T
Q  262 ctggt-cgtgactcaacctagtaa 284  Q
    || || || |||||| ||||||||    
T  48432421 ctagtccgcgactcagcctagtaa 48432398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 179 - 275
Target Start/End: Original strand, 20090662 - 20090757
Alignment:
Q  179 tgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtcttaaagagagcgacctggtcgtgactca 275  Q
    ||||||||||||||| ||||| ||||| || |||  |||||||||||  ||  | |||| |||||||||||||||||||||||||||||||||||||    
T  20090662 tgttttatcctggagacggcgcggttgctagtctaccttgcacaattcaggt-agtgccgcgaaacgtcttaaagagagcgacctggtcgtgactca 20090757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 179 - 275
Target Start/End: Original strand, 20095787 - 20095882
Alignment:
Q  179 tgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtcttaaagagagcgacctggtcgtgactca 275  Q
    ||||||||||||||| ||||| ||||| || |||  |||||||||||  ||  | |||| |||||||||||||||||||||||||||||||||||||    
T  20095787 tgttttatcctggagacggcgcggttgctagtctaccttgcacaattcaggt-agtgccgcgaaacgtcttaaagagagcgacctggtcgtgactca 20095882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 179 - 275
Target Start/End: Original strand, 34129169 - 34129264
Alignment:
Q  179 tgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtcttaaagagagcgacctggtcgtgactca 275  Q
    ||||||||||||||| ||||| ||||| || |||  |||||||||||| ||  | |||| |||||||||||||||| ||||||||||||||||||||    
T  34129169 tgttttatcctggagacggcgcggttgctagtctaccttgcacaatttaggt-agtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactca 34129264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 179 - 278
Target Start/End: Complemental strand, 20810467 - 20810369
Alignment:
Q  179 tgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtcttaaagagagcgacctggtcgtgactcaacc 278  Q
    ||||||||||||||| ||||||||||| || |||  ||||||||| |  ||| | |||  |||||||||||||||||| |||||||||||||||||||||    
T  20810467 tgttttatcctggagacggcgtggttgttagtctaccttgcacaacta-gggtagtgctgcgaaacgtcttaaagagaacgacctggtcgtgactcaacc 20810369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 179 - 278
Target Start/End: Complemental strand, 53119622 - 53119524
Alignment:
Q  179 tgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtcttaaagagagcgacctggtcgtgactcaacc 278  Q
    ||||||||||| ||| ||||||||||| || |||  ||||||||| || | | | |||| |||||||||||||||||||||||||| |||||||||||||    
T  53119622 tgttttatcctagagacggcgtggttgttagtctaccttgcacaactt-gagtagtgccgcgaaacgtcttaaagagagcgacctgatcgtgactcaacc 53119524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 179 - 284
Target Start/End: Original strand, 48435828 - 48435933
Alignment:
Q  179 tgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtcttaaagagagcgacctggt-cgtgactcaac 277  Q
    ||||||||||||| | || ||||||||||| |||| ||||||| ||||||  || || ||||||||||||||||||||||||||| || || |||||| |    
T  48435828 tgttttatcctggggacgtcgtggttgatagtctg-cttgcactattttgaacagtgtcacgaaacgtcttaaagagagcgacctagtccgcgactcagc 48435926  T
Q  278 ctagtaa 284  Q
    |||||||    
T  48435927 ctagtaa 48435933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 179 - 284
Target Start/End: Original strand, 15768191 - 15768295
Alignment:
Q  179 tgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtcttaaagagagcgacctggtcgtgactcaacc 278  Q
    ||||||||||||||| ||||| ||||| || |||  |||||||| ||  ||  | |||| ||||||||||||||||||||||||||||||||||||| ||    
T  15768191 tgttttatcctggagacggcgcggttgctagtctaccttgcacagttcaggt-agtgccgcgaaacgtcttaaagagagcgacctggtcgtgactcatcc 15768289  T
Q  279 tagtaa 284  Q
     |||||    
T  15768290 cagtaa 15768295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 179 - 275
Target Start/End: Complemental strand, 17364160 - 17364063
Alignment:
Q  179 tgttttatcctggaggcggcgtggttgataatctgtcttgcaca-attttgggcattgccacgaaacgtcttaaagagagcgacctggtcgtgactca 275  Q
    ||||||||||||||| ||||| ||||| || |||  |||||||| | ||| || | |||| |||||||||||||||| ||||||||||||||||||||    
T  17364160 tgttttatcctggagacggcgcggttgctagtctaccttgcacacaatttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactca 17364063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 179 - 275
Target Start/End: Original strand, 3476946 - 3477041
Alignment:
Q  179 tgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtcttaaagagagcgacctggtcgtgactca 275  Q
    ||||||||||||||| ||||| ||||| || |||  ||||||||| || ||  | |||| |||||||||||||||| ||||||||||||||||||||    
T  3476946 tgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggt-agtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactca 3477041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 179 - 263
Target Start/End: Complemental strand, 4662279 - 4662196
Alignment:
Q  179 tgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtcttaaagagagcgacct 263  Q
    ||||||||||||| | || | ||||||||| |||| |||||| ||||||||||||| |||| |||||||||| ||||||||||||    
T  4662279 tgttttatcctggggacgtcatggttgatagtctg-cttgcataattttgggcatttccactaaacgtcttagagagagcgacct 4662196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 179 - 275
Target Start/End: Original strand, 15763030 - 15763125
Alignment:
Q  179 tgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtcttaaagagagcgacctggtcgtgactca 275  Q
    ||||||||||||||| ||||| ||||| || |||  |||||||| ||  ||  | |||| |||||||||||||||||||||||||||||||||||||    
T  15763030 tgttttatcctggagacggcgcggttgctagtctaccttgcacagttcaggt-agtgccgcgaaacgtcttaaagagagcgacctggtcgtgactca 15763125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 166 - 257
Target Start/End: Complemental strand, 16013816 - 16013724
Alignment:
Q  166 ttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggc-attgccacgaaacgtcttaaagagag 257  Q
    |||||| || |||| ||||||||||||||||||||||| |||| ||| ||||||||||||||  |  | || |||||||||||||||||||||    
T  16013816 ttgtagatgagcttattttatcctggaggcggcgtggtggatagtctatcttgcacaatttttagatagtgtcacgaaacgtcttaaagagag 16013724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 179 - 275
Target Start/End: Complemental strand, 17368814 - 17368719
Alignment:
Q  179 tgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtcttaaagagagcgacctggtcgtgactca 275  Q
    ||||||||||||||| ||||| ||||| || |||  ||||||||| || ||  | |||| |||||||||||||||| ||||||||||||||||||||    
T  17368814 tgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggt-agtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactca 17368719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 179 - 278
Target Start/End: Original strand, 2617256 - 2617355
Alignment:
Q  179 tgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtcttaaagagagcgacctggtcgtgactcaacc 278  Q
    ||||||||||||||||||||| ||||| || |||  |||||||||  | | | | |||| |||||||||||||||| |||||| |||| |||||||||||    
T  2617256 tgttttatcctggaggcggcgcggttgttagtctaccttgcacaaactcgagtagtgccgcgaaacgtcttaaagaaagcgacatggttgtgactcaacc 2617355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 179 - 278
Target Start/End: Original strand, 38436991 - 38437089
Alignment:
Q  179 tgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtcttaaagagagcgacctggtcgtgactcaacc 278  Q
    ||||||||||||||| ||||||||||| || |||  ||| ||||| || ||  | ||||||||||||||||||||| || |||||| |||||||||||||    
T  38436991 tgttttatcctggagacggcgtggttgttagtctacctttcacaactt-ggatagtgccacgaaacgtcttaaagaaagtgacctgatcgtgactcaacc 38437089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 299 - 348
Target Start/End: Complemental strand, 16013693 - 16013644
Alignment:
Q  299 aatagaatttggaaatccaaatacaactgtttggaaatccaaaaacaaca 348  Q
    |||||| |||||||||||||||||||| |||||||||||||||| |||||    
T  16013693 aatagactttggaaatccaaatacaacagtttggaaatccaaaaccaaca 16013644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 162 - 263
Target Start/End: Complemental strand, 16983105 - 16983006
Alignment:
Q  162 acagttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtcttaaagagagcgac 261  Q
    |||||||||| |||| |||||||||||||| | |  ||||||||||| ||| |||| ||||||||||| || || || ||||||||||||| ||||||||    
T  16983105 acagttgtagctggg-ttgttttatcctggggacatcgtggttgatattct-tctttcacaattttggacagtgtcatgaaacgtcttaaaaagagcgac 16983008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 179 - 275
Target Start/End: Complemental strand, 17357933 - 17357836
Alignment:
Q  179 tgttttatcctggaggcggcgtggttgataatctgtcttgcaca-attttgggcattgccacgaaacgtcttaaagagagcgacctggtcgtgactca 275  Q
    ||||||||||||||| ||||| ||||| || |||  |||||||| | ||| || | |||| |||||||||||||||| | ||||||||||||||||||    
T  17357933 tgttttatcctggagacggcgcggttgctagtctaccttgcacacaatttaggtagtgccgcgaaacgtcttaaagaaatcgacctggtcgtgactca 17357836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 179 - 284
Target Start/End: Original strand, 27605135 - 27605240
Alignment:
Q  179 tgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtcttaaagagagcgacctggtcgtgactcaacc 278  Q
    ||||||||||| ||||||| || |||| || |||  |||||||||  | ||| | |||  ||||| ||||||||||||||||| ||||||||||||||||    
T  27605135 tgttttatcctagaggcggtgtagttgttagtctaccttgcacaaactcgggtagtgctgcgaaatgtcttaaagagagcgacttggtcgtgactcaacc 27605234  T
Q  279 tagtaa 284  Q
    | ||||    
T  27605235 tggtaa 27605240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 179 - 275
Target Start/End: Original strand, 3482423 - 3482518
Alignment:
Q  179 tgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtcttaaagagagcgacctggtcgtgactca 275  Q
    ||||||||||||||| ||||| ||||| || |||  ||||||||| || ||  || ||| ||||| |||||||||| ||||||||||||||||||||    
T  3482423 tgttttatcctggagacggcgcggttgctagtctaccttgcacaaattaggtaat-gccgcgaaaagtcttaaagaaagcgacctggtcgtgactca 3482518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 144 - 208
Target Start/End: Original strand, 6596322 - 6596386
Alignment:
Q  144 aatgcagtagttaatcgaacagttgtagttgggcttgttttatcctggaggcggcgtggttgata 208  Q
    |||||||||||||| |  | | |||||| || |||||||||||||||||||||||||||||||||    
T  6596322 aatgcagtagttaaccacataattgtagctgagcttgttttatcctggaggcggcgtggttgata 6596386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 146 - 290
Target Start/End: Original strand, 19276887 - 19277031
Alignment:
Q  146 tgcagtagttaatcgaacagttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacg 245  Q
    |||||||| ||| || | |||| || ||| ||||||||||| || |||||  ||||||||||| |||||||| ||||||||| | || |||||| ||| |    
T  19276887 tgcagtagctaaccgcatagttttaattgagcttgttttattctagaggcaacgtggttgatagtctgtcttacacaattttcgacagtgccacaaaaag 19276986  T
Q  246 tcttaaagagagcgacctggtcgtgactcaacctagtaacaactt 290  Q
    ||||||| ||||  ||||  | || ||||||| || |||||||||    
T  19276987 tcttaaaaagagaaaccttattgtaactcaacttaataacaactt 19277031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 179 - 275
Target Start/End: Complemental strand, 54270739 - 54270644
Alignment:
Q  179 tgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtcttaaagagagcgacctggtcgtgactca 275  Q
    ||||||||||||||| ||||| ||||| || |||  ||||||||| || ||  | |||| ||||| |||||||||| ||||||||||||||||||||    
T  54270739 tgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggt-agtgccgcgaaatgtcttaaagaaagcgacctggtcgtgactca 54270644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 151 - 201
Target Start/End: Complemental strand, 55325897 - 55325847
Alignment:
Q  151 tagttaatcgaacagttgtagttgggcttgttttatcctggaggcggcgtg 201  Q
    ||||||| || |||||||||  |||||||||||||||||||||||||||||    
T  55325897 tagttaaccgcacagttgtaactgggcttgttttatcctggaggcggcgtg 55325847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 179 - 276
Target Start/End: Original strand, 21494302 - 21494399
Alignment:
Q  179 tgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtcttaaagagagcgacctggtcgtgactcaa 276  Q
    |||||||||| |||| ||||| ||||| || |||  |||||||||  ||||| | || |  || || |||||||||||||||||||||||||||||||    
T  21494302 tgttttatcccggagacggcgcggttgttagtctaccttgcacaaacttgggtactgtcgtgatacatcttaaagagagcgacctggtcgtgactcaa 21494399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 178 - 284
Target Start/End: Original strand, 7806553 - 7806656
Alignment:
Q  178 ttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtcttaaagagagcgacctggtcgtgactcaac 277  Q
    |||||||||||| ||||| |||||||||||| |||  ||   |||||||| || | || |  ||| |||||||||||||||||||||||||  |||||||    
T  7806553 ttgttttatcctcgaggcagcgtggttgatagtctacct---acaattttaggtagtgtcgtgaatcgtcttaaagagagcgacctggtcgcaactcaac 7806649  T
Q  278 ctagtaa 284  Q
    || ||||    
T  7806650 ctggtaa 7806656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 179 - 275
Target Start/End: Complemental strand, 55128885 - 55128790
Alignment:
Q  179 tgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtcttaaagagagcgacctggtcgtgactca 275  Q
    ||||||||||||||| ||||| ||||| || |||  ||| ||||| || ||  | |||| |||||||||||||||| | ||||||||||||||||||    
T  55128885 tgttttatcctggagacggcgcggttgctagtctaccttacacaacttaggt-agtgccgcgaaacgtcttaaagaaaacgacctggtcgtgactca 55128790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 234 - 273
Target Start/End: Complemental strand, 10321483 - 10321444
Alignment:
Q  234 tgccacgaaacgtcttaaagagagcgacctggtcgtgact 273  Q
    |||| |||||||||||||||| ||||||||||||||||||    
T  10321483 tgccgcgaaacgtcttaaagaaagcgacctggtcgtgact 10321444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 177 - 287
Target Start/End: Original strand, 17026103 - 17026213
Alignment:
Q  177 cttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtcttaaagagagcgacctggtcgtgactcaa 276  Q
    |||||||||||||  || |  ||| ||||||| |||||||||||||| ||| | |  || ||  ||||||||||||||||||||  || |||||||| ||    
T  17026103 cttgttttatcctaaagacaacgttgttgatagtctgtcttgcacaaatttagacggtgtcagaaaacgtcttaaagagagcgaattgatcgtgacttaa 17026202  T
Q  277 cctagtaacaa 287  Q
    |||| ||||||    
T  17026203 cctattaacaa 17026213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 178 - 256
Target Start/End: Complemental strand, 46964109 - 46964031
Alignment:
Q  178 ttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtcttaaagaga 256  Q
    |||||||||||| |||| ||| ||| ||||| ||||  ||||||||||||   || ||||| |||||||||||||||||    
T  46964109 ttgttttatcctagaggtggcatgggtgatagtctgcattgcacaattttaaacagtgccatgaaacgtcttaaagaga 46964031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 240 - 278
Target Start/End: Complemental strand, 53358277 - 53358239
Alignment:
Q  240 gaaacgtcttaaagagagcgacctggtcgtgactcaacc 278  Q
    ||||||||||||||| |||||||||| ||||||||||||    
T  53358277 gaaacgtcttaaagaaagcgacctggccgtgactcaacc 53358239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 178 - 223
Target Start/End: Original strand, 1741108 - 1741153
Alignment:
Q  178 ttgttttatcctggaggcggcgtggttgataatctgtcttgcacaa 223  Q
    |||||||||||||||||||||| ||||| |||| || |||||||||    
T  1741108 ttgttttatcctggaggcggcgcggttgttaatttgccttgcacaa 1741153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 179 - 284
Target Start/End: Original strand, 4117600 - 4117704
Alignment:
Q  179 tgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtcttaaagagagcgacctggtcgtgactcaacc 278  Q
    ||||||||||||||| | ||| ||||| || |||  ||||||||| || ||  | |||| ||||| ||||||| || |||||||||||||||||||| ||    
T  4117600 tgttttatcctggagacagcgcggttgctagtctaccttgcacaacttaggt-agtgccgcgaaatgtcttaacgaaagcgacctggtcgtgactcaccc 4117698  T
Q  279 tagtaa 284  Q
     |||||    
T  4117699 cagtaa 4117704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 245 - 278
Target Start/End: Original strand, 10586248 - 10586281
Alignment:
Q  245 gtcttaaagagagcgacctggtcgtgactcaacc 278  Q
    |||||||||| |||||||||||||||||||||||    
T  10586248 gtcttaaagaaagcgacctggtcgtgactcaacc 10586281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 234 - 275
Target Start/End: Original strand, 30341898 - 30341939
Alignment:
Q  234 tgccacgaaacgtcttaaagagagcgacctggtcgtgactca 275  Q
    |||| |||||||||||||||| || |||||||||||||||||    
T  30341898 tgccgcgaaacgtcttaaagaaagtgacctggtcgtgactca 30341939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 177 - 256
Target Start/End: Original strand, 1641069 - 1641149
Alignment:
Q  177 cttgttttatcc-tggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtcttaaagaga 256  Q
    |||||||||||| || || ||| |||||||||| ||||||||  |||||||| |||| || | | ||||||||||||||||    
T  1641069 cttgttttatccctgaagacggggtggttgatagtctgtcttttacaatttttggcagtgtcgcaaaacgtcttaaagaga 1641149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 241 - 273
Target Start/End: Original strand, 1688948 - 1688980
Alignment:
Q  241 aaacgtcttaaagagagcgacctggtcgtgact 273  Q
    |||||||||||||| ||||||||||||||||||    
T  1688948 aaacgtcttaaagaaagcgacctggtcgtgact 1688980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 171; Significance: 1e-91; HSPs: 56)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 171; E-Value: 1e-91
Query Start/End: Original strand, 146 - 348
Target Start/End: Complemental strand, 30651057 - 30650855
Alignment:
Q  146 tgcagtagttaatcgaacagttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacg 245  Q
    |||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||| |||| |||||||||||||||||| ||||||||||||    
T  30651057 tgcagtagttaatcgaacagttgtagctgggcttgttttatcttggaggcggcgtggttgatagtctgccttgcacaattttgggcagtgccacgaaacg 30650958  T
Q  246 tcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtggataatagaatttggaaatccaaatacaactgtttggaaatccaaaaaca 345  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||    
T  30650957 tcttaaagagagcgatctggtcgtgactcaacctagtaacaacttcggtagataatagaatttggaaatccaaatacaacagtttggaaatccaaaaaca 30650858  T
Q  346 aca 348  Q
    |||    
T  30650857 aca 30650855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 167; E-Value: 2e-89
Query Start/End: Original strand, 146 - 348
Target Start/End: Original strand, 9189770 - 9189972
Alignment:
Q  146 tgcagtagttaatcgaacagttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacg 245  Q
    |||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||| |||| ||||||||||||||| || ||||||||||||    
T  9189770 tgcagtagttaatcaaacagttgtagctgggcttgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttggacagtgccacgaaacg 9189869  T
Q  246 tcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtggataatagaatttggaaatccaaatacaactgtttggaaatccaaaaaca 345  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||    
T  9189870 tcttaaagagagcaacctggtcgtgactcaacctagtaacaacttcggtagataatagaatttggaaatccaaatacaacagtttggaaatccaaaaaca 9189969  T
Q  346 aca 348  Q
    |||    
T  9189970 aca 9189972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 167; E-Value: 2e-89
Query Start/End: Original strand, 146 - 348
Target Start/End: Original strand, 19892433 - 19892635
Alignment:
Q  146 tgcagtagttaatcgaacagttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacg 245  Q
    |||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||| ||||| |||||||||||||| || ||||| ||||||    
T  19892433 tgcagtagttaatcgaacagttgtagctgagcttgttttatcctggaggcggcgtggttgatagtctgtgttgcacaattttggacagtgccaggaaacg 19892532  T
Q  246 tcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtggataatagaatttggaaatccaaatacaactgtttggaaatccaaaaaca 345  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||    
T  19892533 tcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtagataatagaatttggaaatccaaatacaacagtttggaaatccaaaaaca 19892632  T
Q  346 aca 348  Q
    |||    
T  19892633 aca 19892635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 163; E-Value: 6e-87
Query Start/End: Original strand, 146 - 348
Target Start/End: Original strand, 9180691 - 9180893
Alignment:
Q  146 tgcagtagttaatcgaacagttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacg 245  Q
    |||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||| |||| ||||||||||||||| || ||||||||||||    
T  9180691 tgcagtagttaatcaaacagttgtagctgggcttgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttggacagtgccacgaaacg 9180790  T
Q  246 tcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtggataatagaatttggaaatccaaatacaactgtttggaaatccaaaaaca 345  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||| |||||||||| ||||||||    
T  9180791 tcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtagataatagaatttgaaaatccaaatacaacagtttggaaattcaaaaaca 9180890  T
Q  346 aca 348  Q
    |||    
T  9180891 aca 9180893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 163; E-Value: 6e-87
Query Start/End: Original strand, 146 - 348
Target Start/End: Complemental strand, 18344559 - 18344357
Alignment:
Q  146 tgcagtagttaatcgaacagttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacg 245  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||| ||| |||| |||||||||||||||||| ||||||||||||    
T  18344559 tgcagtagttaatcgaacagttgtagctgggcttgttttatcctggagccggcgtggttaatagtctgccttgcacaattttgggcagtgccacgaaacg 18344460  T
Q  246 tcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtggataatagaatttggaaatccaaatacaactgtttggaaatccaaaaaca 345  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||| ||||||||||||||| |||||||||||||||||||    
T  18344459 tcttaaagagagcgacctggtcgtgactcaatctagtaacaacttcggttgataatagaatttgaaaatccaaatacaacagtttggaaatccaaaaaca 18344360  T
Q  346 aca 348  Q
    |||    
T  18344359 aca 18344357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 160; E-Value: 4e-85
Query Start/End: Original strand, 146 - 349
Target Start/End: Original strand, 1934960 - 1935163
Alignment:
Q  146 tgcagtagttaatcgaacagttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacg 245  Q
    |||| ||||||| || ||||||| || |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||    
T  1934960 tgcattagttaaccgcacagttgcagctgggcttgttttatcctggaggcggcgtggttgatagtctgtcttgcacaattttgggcagtgccacgaaacg 1935059  T
Q  246 tcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtggataatagaatttggaaatccaaatacaactgtttggaaatccaaaaaca 345  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||| |||| ||||||||    
T  1935060 tcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtagataatagaatttggaaatccaaatacaacagtttgaaaattcaaaaaca 1935159  T
Q  346 acag 349  Q
    ||||    
T  1935160 acag 1935163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 155; E-Value: 3e-82
Query Start/End: Original strand, 146 - 348
Target Start/End: Original strand, 7737818 - 7738020
Alignment:
Q  146 tgcagtagttaatcgaacagttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacg 245  Q
    |||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||| ||||     
T  7737818 tgcaatagttaatcgaacaattgtagttgggcttgttttatcctggaggcggcgtggttgatagtctgtcttgcacaattttgggcagtgccacaaaact 7737917  T
Q  246 tcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtggataatagaatttggaaatccaaatacaactgtttggaaatccaaaaaca 345  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| || | ||||||||||| ||    
T  7737918 tcttaaagagagcgacatggtcgtgactcaacctagtaacaacttcggtggataatagaatttgaaaatccaaatacaacagtatagaaatccaaaatca 7738017  T
Q  346 aca 348  Q
    |||    
T  7738018 aca 7738020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 155; E-Value: 3e-82
Query Start/End: Original strand, 146 - 348
Target Start/End: Complemental strand, 31326867 - 31326665
Alignment:
Q  146 tgcagtagttaatcgaacagttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacg 245  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||| |||| |||||||||||||||||| || || ||||||    
T  31326867 tgcagtagttaatcgcacagttgtagttgggcttgttttatcctggaggtggcgtggttgatagtctgccttgcacaattttgggcagtggcatgaaacg 31326768  T
Q  246 tcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtggataatagaatttggaaatccaaatacaactgtttggaaatccaaaaaca 345  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||| ||||||  ||||||||||||||||||    
T  31326767 tcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtagataatagaatttggaaattcaattacaacattttggaaatccaaaaaca 31326668  T
Q  346 aca 348  Q
    |||    
T  31326667 aca 31326665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 155; E-Value: 3e-82
Query Start/End: Original strand, 146 - 348
Target Start/End: Complemental strand, 35602050 - 35601848
Alignment:
Q  146 tgcagtagttaatcgaacagttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacg 245  Q
    ||||||||||||||||||| |||||| |||| ||||||||||||||||||||||||||||||| |||||||||||||||||||| || ||||||||||||    
T  35602050 tgcagtagttaatcgaacaattgtagctgggtttgttttatcctggaggcggcgtggttgatactctgtcttgcacaattttggacagtgccacgaaacg 35601951  T
Q  246 tcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtggataatagaatttggaaatccaaatacaactgtttggaaatccaaaaaca 345  Q
    ||||||| |||||||||||||||||| |||||||||||||||||||||| |||||||||||||| ||||||||||||||  |||||||||||||||||||    
T  35601950 tcttaaaaagagcgacctggtcgtgattcaacctagtaacaacttcggtagataatagaatttgaaaatccaaatacaatagtttggaaatccaaaaaca 35601851  T
Q  346 aca 348  Q
    |||    
T  35601850 aca 35601848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 151; E-Value: 8e-80
Query Start/End: Original strand, 146 - 348
Target Start/End: Original strand, 35638964 - 35639166
Alignment:
Q  146 tgcagtagttaatcgaacagttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacg 245  Q
    |||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||  |||||||||||||||||||||| ||||||||||||    
T  35638964 tgcagtagttaatcgaacagttgtagctgagcttgttttatcctggaggcggcgtggttgatacgctgtcttgcacaattttgggcagtgccacgaaacg 35639063  T
Q  246 tcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtggataatagaatttggaaatccaaatacaactgtttggaaatccaaaaaca 345  Q
    ||||||| ||||||||||| |||||| ||||| |||||||||||||||| |||||||||||||| ||||||||||||||  |||||||||||||||||||    
T  35639064 tcttaaaaagagcgacctgatcgtgattcaacttagtaacaacttcggtagataatagaatttgaaaatccaaatacaatagtttggaaatccaaaaaca 35639163  T
Q  346 aca 348  Q
    |||    
T  35639164 aca 35639166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 150; E-Value: 3e-79
Query Start/End: Original strand, 151 - 348
Target Start/End: Original strand, 10160696 - 10160893
Alignment:
Q  151 tagttaatcgaacagttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtctta 250  Q
    ||||||| || ||||||| || || ||||||||||||||||||||||||||||||||| |||| |||||||||||||||||| |||||||||||||||||    
T  10160696 tagttaaccgcacagttgcagctgagcttgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttgggcagtgccacgaaacgtctta 10160795  T
Q  251 aagagagcgacctggtcgtgactcaacctagtaacaacttcggtggataatagaatttggaaatccaaatacaactgtttggaaatccaaaaacaaca 348  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||  ||||||||||||||||||||||    
T  10160796 aagagagcgacctggtcgtgactcaacctagtaacaacttcggtagataatagaatttagaaatccaaatacaagagtttggaaatccaaaaacaaca 10160893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 146 - 348
Target Start/End: Complemental strand, 30658391 - 30658189
Alignment:
Q  146 tgcagtagttaatcgaacagttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacg 245  Q
    |||||||||||| || ||||||| || |||||||||||||||||||||||||||||||||||| |||| |||||||||||||| | | ||||||||||||    
T  30658391 tgcagtagttaaccgcacagttgcagctgggcttgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttgagtagtgccacgaaacg 30658292  T
Q  246 tcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtggataatagaatttggaaatccaaatacaactgtttggaaatccaaaaaca 345  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||| |||||||| |||||||||| |||||||||||||||||||    
T  30658291 tcttaaagagagcgacctggtcgtgactcaacatagtaacaacttcggtagataatagaacttggaaatgcaaatacaacagtttggaaatccaaaaaca 30658192  T
Q  346 aca 348  Q
    |||    
T  30658191 aca 30658189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 146 - 348
Target Start/End: Original strand, 42926726 - 42926929
Alignment:
Q  146 tgcagtagttaatcgaacagttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaac- 244  Q
    |||||||||||| || ||||||||||||| |||||| |||||||||||||||||||||||||| |||  |||||||||||||||||| |||||||||||     
T  42926726 tgcagtagttaaccgcacagttgtagttgagcttgtattatcctggaggcggcgtggttgatagtctaccttgcacaattttgggcagtgccacgaaacg 42926825  T
Q  245 -gtcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtggataatagaatttggaaatccaaatacaactgtttggaaatccaaaaa 343  Q
     ||||||||||||||| |||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||| ||||| |||||||||||    
T  42926826 tgtcttaaagagagcggcctgatcgtgactcaacctagtaacaacttcggtagataatagaatttggaaatccaaata-aacagtttgaaaatccaaaaa 42926924  T
Q  344 caaca 348  Q
    |||||    
T  42926925 caaca 42926929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 133; E-Value: 5e-69
Query Start/End: Original strand, 151 - 348
Target Start/End: Original strand, 25478269 - 25478470
Alignment:
Q  151 tagttaatcgaacagttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtctta 250  Q
    |||||| ||| |||||||||| |||||||||||||| ||||||||||||||||||||| |||| |||||||||||||||||| || ||||||||||||||    
T  25478269 tagttattcgcacagttgtagctgggcttgttttattctggaggcggcgtggttgatagtctgccttgcacaattttgggcagtgtcacgaaacgtctta 25478368  T
Q  251 aagagagcgacctggtcgtgactcaacctagtaacaacttcggtggataata----gaatttggaaatccaaatacaactgtttggaaatccaaaaacaa 346  Q
    |||||||||||||||| ||||||||||||||||||||||||||| |||||||    ||||||||||||||||||||||  ||||| ||||||||||||||    
T  25478369 aagagagcgacctggttgtgactcaacctagtaacaacttcggtagataatagaatgaatttggaaatccaaatacaatagtttgaaaatccaaaaacaa 25478468  T
Q  347 ca 348  Q
    ||    
T  25478469 ca 25478470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 161 - 348
Target Start/End: Complemental strand, 30631692 - 30631505
Alignment:
Q  161 aacagttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtcttaaagagagcga 260  Q
    |||||||| ||||||||||||||||||||||||| ||||||||||||| ||| |||||||||||||| |||| |||||||||| || |||||||||| ||    
T  30631692 aacagttgcagttgggcttgttttatcctggaggtggcgtggttgatagtctttcttgcacaatttttggcaatgccacgaaaagttttaaagagagtga 30631593  T
Q  261 cctggtcgtgactcaacctagtaacaacttcggtggataatagaatttggaaatccaaatacaactgtttggaaatccaaaaacaaca 348  Q
    |||  ||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||| ||||||||||||||||||||||    
T  30631592 cctaatcgtgactcaacctagtaacaacttcggtagataatagaacttggaaatccaaatacaacagtttggaaatccaaaaacaaca 30631505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 131; E-Value: 7e-68
Query Start/End: Original strand, 146 - 348
Target Start/End: Complemental strand, 12797053 - 12796851
Alignment:
Q  146 tgcagtagttaatcgaacagttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacg 245  Q
    |||||||||||| || ||||||||||  || ||||||||||||||||| |||||||||||||| ||||||||| ||||||||||||| |||||| |||||    
T  12797053 tgcagtagttaaccgcacagttgtagccggacttgttttatcctggagacggcgtggttgatagtctgtcttgaacaattttgggcagtgccacaaaacg 12796954  T
Q  246 tcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtggataatagaatttggaaatccaaatacaactgtttggaaatccaaaaaca 345  Q
    ||||||||||||||| ||||||||||||||||||| ||||||||||||  |||||||||||||| |||| |||||||||| || ||||||||||||||||    
T  12796953 tcttaaagagagcgatctggtcgtgactcaacctaataacaacttcggcagataatagaatttgaaaattcaaatacaacagtgtggaaatccaaaaaca 12796854  T
Q  346 aca 348  Q
    |||    
T  12796853 aca 12796851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 151 - 348
Target Start/End: Original strand, 25497297 - 25497498
Alignment:
Q  151 tagttaatcgaacagttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtctta 250  Q
    ||||||| || |||||||||| |||||||||||||||||||||||||||||||||||| |||| ||||||||| |||||||| ||  |||||||||||||    
T  25497297 tagttaaccgcacagttgtagctgggcttgttttatcctggaggcggcgtggttgatagtctgacttgcacaaatttgggcagtgttacgaaacgtctta 25497396  T
Q  251 aagagagcgacctggtcgtgactcaacctagtaacaacttcggtggataatagaa----tttggaaatccaaatacaactgtttggaaatccaaaaacaa 346  Q
    ||||||||||||||||||||||||||||||||||||| |||||| ||||||||||    |||||||||| ||||||||  ||||||||||||||||||||    
T  25497397 aagagagcgacctggtcgtgactcaacctagtaacaatttcggtagataatagaatgagtttggaaatctaaatacaatagtttggaaatccaaaaacaa 25497496  T
Q  347 ca 348  Q
    ||    
T  25497497 ca 25497498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 146 - 342
Target Start/End: Complemental strand, 28603431 - 28603230
Alignment:
Q  146 tgcagtagttaatcgaacagttgtagttgggcttgtttt-atcctggaggcgg----cgtggttgataatctgtcttgcacaattttgggcattgccacg 240  Q
    |||||||||||||||||||||||||| ||  |||||||| ||||||||||  |    ||||||||||| |||||||||||||||||||| || || ||||    
T  28603431 tgcagtagttaatcgaacagttgtagctgaacttgtttttatcctggaggtaggtagcgtggttgatagtctgtcttgcacaattttggacagtgtcacg 28603332  T
Q  241 aaacgtcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtggataatagaatttggaaatccaaatacaactgtttggaaatccaa 340  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||    
T  28603331 aaacgttttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtagataatagaatttggaaatccaaatacaacagtttggaaatccaa 28603232  T
Q  341 aa 342  Q
    ||    
T  28603231 aa 28603230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 146 - 348
Target Start/End: Complemental strand, 29677509 - 29677308
Alignment:
Q  146 tgcagtagttaatcgaacagttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacg 245  Q
    |||||||||||| || |||||||||| ||| ||| |||||||||||||||||||||||||||| ||||  ||||||||||||||||| ||||||||||||    
T  29677509 tgcagtagttaaccgcacagttgtagctggacttattttatcctggaggcggcgtggttgatagtctgctttgcacaattttgggcagtgccacgaaacg 29677410  T
Q  246 tcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtggataatagaatttggaaatccaaatacaactgtttggaaatccaaaaaca 345  Q
    |||||||||||||||| || ||||||||||||||||||||||||||| | |||||||||||||| |||| |||||||||| |||| |||||||||||| |    
T  29677409 tcttaaagagagcgacatgatcgtgactcaacctagtaacaacttcgctagataatagaatttgaaaattcaaatacaacagttt-gaaatccaaaaata 29677311  T
Q  346 aca 348  Q
    |||    
T  29677310 aca 29677308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 146 - 348
Target Start/End: Complemental strand, 29677895 - 29677694
Alignment:
Q  146 tgcagtagttaatcgaacagttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacg 245  Q
    |||||||||||| || |||||||||| ||||||| |||||||||| ||||||| ||||||||| | || ||||||||||||| |||| |||||| ||| |    
T  29677895 tgcagtagttaaccgcacagttgtagctgggctttttttatcctgtaggcggcttggttgatagtttgccttgcacaatttttggcagtgccactaaatg 29677796  T
Q  246 tcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtggataatagaatttggaaatccaaatacaactgtttggaaatccaaaaaca 345  Q
    |||||| |||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||| |||| ||||||||||||||    
T  29677795 tcttaatgagagcgacctggtcgtgactcaacctagtaacaacttcgctagataatagaatttggaaatccaaatacaacagttt-gaaatccaaaaaca 29677697  T
Q  346 aca 348  Q
    |||    
T  29677696 aca 29677694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 126; E-Value: 7e-65
Query Start/End: Original strand, 11 - 148
Target Start/End: Original strand, 25483054 - 25483191
Alignment:
Q  11 cacagaataattagagagctctaaaaggaacggttaaagtatatcgtgcacgtactgataaagaattattcaatcctttgacgaaaggaattactagaaa 110  Q
    |||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  25483054 cacaaaatgattagagagctctaaaaggaacggttaaagtatatcgtgcacgtactgataaagaattagtcaatcctttgacgaaaggaattactagaaa 25483153  T
Q  111 gaaagtcataaacacatccaataggatgtgactaatgc 148  Q
    ||||||||||||||||||||||||||||||||||||||    
T  25483154 gaaagtcataaacacatccaataggatgtgactaatgc 25483191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 126; E-Value: 7e-65
Query Start/End: Original strand, 11 - 148
Target Start/End: Original strand, 25490660 - 25490797
Alignment:
Q  11 cacagaataattagagagctctaaaaggaacggttaaagtatatcgtgcacgtactgataaagaattattcaatcctttgacgaaaggaattactagaaa 110  Q
    |||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  25490660 cacaaaatgattagagagctctaaaaggaacggttaaagtatatcgtgcacgtactgataaagaattagtcaatcctttgacgaaaggaattactagaaa 25490759  T
Q  111 gaaagtcataaacacatccaataggatgtgactaatgc 148  Q
    ||||||||||||||||||||||||||||||||||||||    
T  25490760 gaaagtcataaacacatccaataggatgtgactaatgc 25490797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 11 - 148
Target Start/End: Original strand, 17973635 - 17973772
Alignment:
Q  11 cacagaataattagagagctctaaaaggaacggttaaagtatatcgtgcacgtactgataaagaattattcaatcctttgacgaaaggaattactagaaa 110  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  17973635 cacagaatgattagagagctctaaaaggaacggttaaagtatatcgtgcacgtactgataaagaattagtcaatcctttgacgaaaggaattactagaaa 17973734  T
Q  111 gaaagtcataaacacatccaataggatgtgactaatgc 148  Q
    ||||||| |||||||||||||||||||| |||||||||    
T  17973735 gaaagtcctaaacacatccaataggatgggactaatgc 17973772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 11 - 148
Target Start/End: Complemental strand, 30652725 - 30652588
Alignment:
Q  11 cacagaataattagagagctctaaaaggaacggttaaagtatatcgtgcacgtactgataaagaattattcaatcctttgacgaaaggaattactagaaa 110  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  30652725 cacagaatgattagagagctctaaaaggaacggttaaagtatatcgtgcacgtactgataaagaattagtcaatcctttgacgaaaggaattactagaaa 30652626  T
Q  111 gaaagtcataaacacatccaataggatgtgactaatgc 148  Q
    ||||||| |||||||||||||||||||| |||||||||    
T  30652625 gaaagtcctaaacacatccaataggatgggactaatgc 30652588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 11 - 148
Target Start/End: Original strand, 9183702 - 9183839
Alignment:
Q  11 cacagaataattagagagctctaaaaggaacggttaaagtatatcgtgcacgtactgataaagaattattcaatcctttgacgaaaggaattactagaaa 110  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  9183702 cacagaatgattagagagctctaaaaggaacggttaaagtatatcgtgcacgtactgataaagaattagtcaatcctttgacgaaaggaattactagaaa 9183801  T
Q  111 gaaagtcataaacacatccaataggatgtgactaatgc 148  Q
    ||||||| ||||||||||||| |||||| |||||||||    
T  9183802 gaaagtcctaaacacatccaagaggatgggactaatgc 9183839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 146 - 294
Target Start/End: Original strand, 19094461 - 19094610
Alignment:
Q  146 tgcagtagttaatcgaacagttgtagttgggcttgtttt-atcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaac 244  Q
    ||||||| ||||||| |||||||||| || ||||||||| ||||||||||||| |||||||||| | || |||||||||||||||||| | |||  ||||    
T  19094461 tgcagtaattaatcgcacagttgtagctgagcttgtttttatcctggaggcggtgtggttgatattttgccttgcacaattttgggcagtaccaaaaaac 19094560  T
Q  245 gtcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggt 294  Q
    || |||| |||||||||||| ||||||||||||||| |||||||||||||    
T  19094561 gttttaaggagagcgacctgatcgtgactcaacctaataacaacttcggt 19094610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 166 - 348
Target Start/End: Original strand, 19578401 - 19578595
Alignment:
Q  166 ttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtcttaaagagagcgacctgg 265  Q
    |||||||||| ||||||||| ||||||||| || ||||||||| |||  ||||||||||||| || | |||||| |||||||||||||||||||| ||||    
T  19578401 ttgtagttggacttgttttaccctggaggcagcatggttgatagtcttccttgcacaattttaggtagtgccacaaaacgtcttaaagagagcgatctgg 19578500  T
Q  266 tcgtgactcaacctagtaacaacttcggtggataat------------agaatttggaaatccaaatacaactgtttggaaatccaaaaacaaca 348  Q
    ||||||||||||||| ||||||||||||| |||| |            |||||||| ||||||||||||||  |||||||||||||||| |||||    
T  19578501 tcgtgactcaacctaataacaacttcggtagatattctctttcaaagtagaatttgaaaatccaaatacaatagtttggaaatccaaaaccaaca 19578595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 149 - 294
Target Start/End: Original strand, 40847565 - 40847710
Alignment:
Q  149 agtagttaatcgaacagttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtct 248  Q
    ||||||||| |  |||||||||||||| |||||||||||| ||||| ||||||||||||| | || ||||||||| ||||  || |||||| ||||||||    
T  40847565 agtagttaaccacacagttgtagttggacttgttttatccaggaggtggcgtggttgatagtttgccttgcacaactttgaacagtgccacaaaacgtct 40847664  T
Q  249 taaagagagcgacctggtcgtgactcaacctagtaacaacttcggt 294  Q
    |||||||| |||| |||||||||||||| |||||||||||||||||    
T  40847665 taaagagaacgacatggtcgtgactcaatctagtaacaacttcggt 40847710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 148 - 289
Target Start/End: Original strand, 21523689 - 21523829
Alignment:
Q  148 cagtagttaatcgaacagttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtc 247  Q
    |||||||||| || |||||||||| ||  ||||||||| ||| || ||||||||||||||| |||  |||||||||||||||||| |||||||||||||     
T  21523689 cagtagttaaccgcacagttgtagctgaacttgttttaacctagaagcggcgtggttgatagtctcccttgcacaattttgggcagtgccacgaaacgt- 21523787  T
Q  248 ttaaagagagcgacctggtcgtgactcaacctagtaacaact 289  Q
    ||||||| ||| ||||||||||||||||||||| ||||||||    
T  21523788 ttaaagatagcaacctggtcgtgactcaacctattaacaact 21523829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 33 - 148
Target Start/End: Complemental strand, 30647988 - 30647872
Alignment:
Q  33 aaaaggaacggttaaagtatatcgtgcacgtactgat-aaagaattattcaatcctttgacgaaaggaattactagaaagaaagtcataaacacatccaa 131  Q
    |||| |||||||||||||||||| || | |||||||| ||||||||  |||||||||||||||||||||||||||||||| |||||||| ||||||||||    
T  30647988 aaaatgaacggttaaagtatatcatgtatgtactgatgaaagaattcgtcaatcctttgacgaaaggaattactagaaaggaagtcatatacacatccaa 30647889  T
Q  132 taggatgtgactaatgc 148  Q
    |||||||  ||||||||    
T  30647888 taggatggcactaatgc 30647872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 261 - 348
Target Start/End: Original strand, 15489796 - 15489883
Alignment:
Q  261 cctggtcgtgactcaacctagtaacaacttcggtggataatagaatttggaaatccaaatacaactgtttggaaatccaaaaacaaca 348  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||| |||| | ||||||||   ||||||||||||||||||||    
T  15489796 cctggtcgtgactcaacctagtaacaacttcggtagataatagaatttgaaaattctaatacaacatattggaaatccaaaaacaaca 15489883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 151 - 299
Target Start/End: Original strand, 17545270 - 17545419
Alignment:
Q  151 tagttaatcgaacagttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtctta 250  Q
    ||||||| || || ||||||| || |||||||||||||| |||| ||||||||||||| ||| | |||||||| ||||   | || ||||||||||||||    
T  17545270 tagttaaccgcactgttgtagatgtgcttgttttatcctcgaggtggcgtggttgatagtcttttttgcacaactttgaaaagtgtcacgaaacgtctta 17545369  T
Q  251 a-agagagcgacctggtcgtgactcaacctagtaacaacttcggtggata 299  Q
    | | | | ||||||| |||| |||||||||||||||||||||||| ||||    
T  17545370 agaaaaaacgacctgatcgtaactcaacctagtaacaacttcggtagata 17545419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 203 - 348
Target Start/End: Complemental strand, 20711516 - 20711358
Alignment:
Q  203 ttgataatctgtcttgcacaattttgggcattgccacgaaacgtcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtggat---- 298  Q
    |||||| ||||||||||||||||||| ||| ||| ||||||| |||||||  ||| ||  |||||||||||||||||||||||||||||||| |||        
T  20711516 ttgatagtctgtcttgcacaattttgagcagtgctacgaaacatcttaaaaggagtgatatggtcgtgactcaacctagtaacaacttcggtagatattt 20711417  T
Q  299 --------aatagaatttggaaatcc-aaatacaactgtttggaaatccaaaaacaaca 348  Q
            ||||||||||||||| || ||||||||| ||||| ||||||||||||||||    
T  20711416 tcttaaaaaatagaatttggaaaaccaaaatacaacagtttgtaaatccaaaaacaaca 20711358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 179 - 278
Target Start/End: Complemental strand, 42914737 - 42914639
Alignment:
Q  179 tgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtcttaaagagagcgacctggtcgtgactcaacc 278  Q
    ||||||||||||||| ||||||||||| || |||  ||||||||| || ||  | |||| |||||||||||||||||| |||||||||||||||||||||    
T  42914737 tgttttatcctggagacggcgtggttgttagtctaccttgcacaacttaggt-agtgccgcgaaacgtcttaaagagaacgacctggtcgtgactcaacc 42914639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 33 - 133
Target Start/End: Original strand, 24536327 - 24536424
Alignment:
Q  33 aaaaggaacggttaaagtatatcgtgcacgtactgataaagaattattcaatcctttgacgaaaggaattactagaaagaaagtcataaacacatccaat 132  Q
    ||||||||||||||||||| ||| || |||||||||| |||||||| |  |||||||||| |||||||| |||   ||||||||| ||||||||||||||    
T  24536327 aaaaggaacggttaaagtagatcatgtacgtactgatgaagaattagttgatcctttgacaaaaggaataact---aagaaagtcctaaacacatccaat 24536423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 179 - 284
Target Start/End: Complemental strand, 160136 - 160031
Alignment:
Q  179 tgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtcttaaagagagcgacctggtcgtgactcaacc 278  Q
    |||||||||  ||||||| || ||||||||  ||  |||||||||||||||| | || |  ||||||| ||||||||||||||||||||||| |||||||    
T  160136 tgttttatctcggaggcgacgcggttgatagcctaccttgcacaattttgggtagtgtcgtgaaacgtattaaagagagcgacctggtcgtgtctcaacc 160037  T
Q  279 tagtaa 284  Q
    ||||||    
T  160036 tagtaa 160031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 179 - 276
Target Start/End: Complemental strand, 5089373 - 5089277
Alignment:
Q  179 tgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtcttaaagagagcgacctggtcgtgactcaa 276  Q
    ||||||||||||||| ||||||||||| || |||  ||||||||| || ||  | |||| ||||||||||||||||||||||||||||| ||||||||    
T  5089373 tgttttatcctggagacggcgtggttgttagtctaccttgcacaactt-ggatagtgccgcgaaacgtcttaaagagagcgacctggtcatgactcaa 5089277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 179 - 275
Target Start/End: Original strand, 42723451 - 42723546
Alignment:
Q  179 tgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtcttaaagagagcgacctggtcgtgactca 275  Q
    ||||||||||||||| ||||| ||||| || |||  |||||||||||  ||  | |||| |||||||||||||||||||||||||||||||||||||    
T  42723451 tgttttatcctggagacggcgcggttgctagtctaccttgcacaattcaggt-agtgccgcgaaacgtcttaaagagagcgacctggtcgtgactca 42723546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 179 - 275
Target Start/End: Original strand, 42728620 - 42728715
Alignment:
Q  179 tgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtcttaaagagagcgacctggtcgtgactca 275  Q
    ||||||||||||||| ||||| ||||| || |||  |||||||||||  ||  | |||| |||||||||||||||||||||||||||||||||||||    
T  42728620 tgttttatcctggagacggcgcggttgctagtctaccttgcacaattcaggt-agtgccgcgaaacgtcttaaagagagcgacctggtcgtgactca 42728715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 179 - 275
Target Start/End: Complemental strand, 44096397 - 44096302
Alignment:
Q  179 tgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtcttaaagagagcgacctggtcgtgactca 275  Q
    ||||||||||||||| ||||| ||||| || |||  |||||||||||  ||  | |||| |||||||||||||||||||||||||||||||||||||    
T  44096397 tgttttatcctggagacggcgcggttgctagtctaccttgcacaattcaggt-agtgccgcgaaacgtcttaaagagagcgacctggtcgtgactca 44096302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 179 - 275
Target Start/End: Original strand, 44754596 - 44754691
Alignment:
Q  179 tgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtcttaaagagagcgacctggtcgtgactca 275  Q
    ||||||||||||||| ||||| ||||| || |||  |||||||||||  ||  | |||| |||||||||||||||||||||||||||||||||||||    
T  44754596 tgttttatcctggagacggcgcggttgctagtctaccttgcacaattcaggt-agtgccgcgaaacgtcttaaagagagcgacctggtcgtgactca 44754691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 179 - 275
Target Start/End: Original strand, 44759762 - 44759857
Alignment:
Q  179 tgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtcttaaagagagcgacctggtcgtgactca 275  Q
    ||||||||||||||| ||||| ||||| || |||  |||||||||||  ||  | |||| |||||||||||||||||||||||||||||||||||||    
T  44759762 tgttttatcctggagacggcgcggttgctagtctaccttgcacaattcaggt-agtgccgcgaaacgtcttaaagagagcgacctggtcgtgactca 44759857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 162 - 284
Target Start/End: Complemental strand, 14104701 - 14104580
Alignment:
Q  162 acagttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtcttaaagagagcgac 261  Q
    |||||||||| | |||| |||||||| ||| | || ||||||||||| | ||| ||||||||||||| ||| || |||||||||||||||||||||||||    
T  14104701 acagttgtagctaggct-gttttatcatggggacgtcgtggttgatagtttgt-ttgcacaattttgagcagtgacacgaaacgtcttaaagagagcgac 14104604  T
Q  262 ctggt-cgtgactcaacctagtaa 284  Q
    || || || |||||| ||||||||    
T  14104603 ctagtccgcgactcagcctagtaa 14104580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 179 - 284
Target Start/End: Original strand, 44957437 - 44957542
Alignment:
Q  179 tgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtcttaaagagagcgacctggt-cgtgactcaac 277  Q
    |||||||||||||||  | ||||||||||| |||| |||||||||||||  ||| |||||| |||||||||||||||| |||||| || | ||||||| |    
T  44957437 tgttttatcctggagatgtcgtggttgatagtctg-cttgcacaattttttgcagtgccacaaaacgtcttaaagagaacgacctagtccatgactcagc 44957535  T
Q  278 ctagtaa 284  Q
    |||||||    
T  44957536 ctagtaa 44957542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 179 - 275
Target Start/End: Original strand, 40518472 - 40518567
Alignment:
Q  179 tgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtcttaaagagagcgacctggtcgtgactca 275  Q
    ||||||||||||||| ||||| ||||| || |||  ||||||| |||| ||  | |||| |||||||||||||||| ||||||||||||||||||||    
T  40518472 tgttttatcctggagacggcgcggttgctagtctaccttgcactatttaggt-agtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactca 40518567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 83 - 148
Target Start/End: Complemental strand, 32080800 - 32080735
Alignment:
Q  83 atcctttgacgaaaggaattactagaaagaaagtcataaacacatccaataggatgtgactaatgc 148  Q
    |||||||||| |||||||| |||| | |||||||| || ||||||||||||||||| |||||||||    
T  32080800 atcctttgacaaaaggaataactaaacagaaagtcctacacacatccaataggatgagactaatgc 32080735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 104 - 148
Target Start/End: Original strand, 3175224 - 3175268
Alignment:
Q  104 ctagaaagaaagtcataaacacatccaataggatgtgactaatgc 148  Q
    |||||||||||||||||||||||| |||||||||| |||||||||    
T  3175224 ctagaaagaaagtcataaacacattcaataggatgggactaatgc 3175268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 143 - 298
Target Start/End: Complemental strand, 32079510 - 32079354
Alignment:
Q  143 taatgcagtagttaatcgaacagttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaa-ttttgggcattgccacga 241  Q
    ||||||| |||||||||| |||||||||| ||  | | ||||||||||||| |  |||| |||||| |||  ||| || || |||||| ||  | ||| |    
T  32079510 taatgcaatagttaatcgcacagttgtagctgaaccttttttatcctggagacaacgtgattgatagtctaccttacataaattttggacagcgtcacaa 32079411  T
Q  242 aacgtcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtggat 298  Q
    ||  ||||||||||||| ||||| |||||||||| || | ||| |||||||||||||    
T  32079410 aatttcttaaagagagcaacctgatcgtgactcagcccaataataacttcggtggat 32079354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 240 - 276
Target Start/End: Complemental strand, 39542936 - 39542900
Alignment:
Q  240 gaaacgtcttaaagagagcgacctggtcgtgactcaa 276  Q
    ||||||||||||||||||||||||| |||||||||||    
T  39542936 gaaacgtcttaaagagagcgacctgatcgtgactcaa 39542900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 304 - 348
Target Start/End: Original strand, 40847735 - 40847779
Alignment:
Q  304 aatttggaaatccaaatacaactgtttggaaatccaaaaacaaca 348  Q
    |||||||||||||||||||||| ||||| ||||| ||||||||||    
T  40847735 aatttggaaatccaaatacaacagtttgaaaatctaaaaacaaca 40847779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 166 - 293
Target Start/End: Complemental strand, 7734707 - 7734581
Alignment:
Q  166 ttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtcttaaagagagcgacctgg 265  Q
    |||||||||  |||||||| |||| |||||| |||||||||||   ||||||| ||||||| |  || || | |||||| ||| ||||  |||||||| |    
T  7734707 ttgtagttgaacttgttttttcctagaggcgacgtggttgatagcatgtcttgtacaatttaga-cagtgtcgcgaaacatctaaaaggaagcgacctag 7734609  T
Q  266 tcgtgactcaacctagtaacaacttcgg 293  Q
    ||||||||||||| | ||| ||||||||    
T  7734608 tcgtgactcaacccaataataacttcgg 7734581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 240 - 278
Target Start/End: Complemental strand, 19538420 - 19538382
Alignment:
Q  240 gaaacgtcttaaagagagcgacctggtcgtgactcaacc 278  Q
    |||| |||||||||| |||||||||||||||||||||||    
T  19538420 gaaatgtcttaaagaaagcgacctggtcgtgactcaacc 19538382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 245 - 278
Target Start/End: Original strand, 6297951 - 6297984
Alignment:
Q  245 gtcttaaagagagcgacctggtcgtgactcaacc 278  Q
    |||||||||| |||||||||||||||||||||||    
T  6297951 gtcttaaagaaagcgacctggtcgtgactcaacc 6297984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 234 - 275
Target Start/End: Original strand, 28751783 - 28751824
Alignment:
Q  234 tgccacgaaacgtcttaaagagagcgacctggtcgtgactca 275  Q
    |||| |||||||||| ||||| ||||||||||||||||||||    
T  28751783 tgccgcgaaacgtctaaaagaaagcgacctggtcgtgactca 28751824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 240 - 284
Target Start/End: Original strand, 39542566 - 39542610
Alignment:
Q  240 gaaacgtcttaaagagagcgacctggtcgtgactcaacctagtaa 284  Q
    |||||||||||||||||| ||| | ||||||||||||||| ||||    
T  39542566 gaaacgtcttaaagagagtgacttagtcgtgactcaacctggtaa 39542610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 179 - 275
Target Start/End: Complemental strand, 40392414 - 40392319
Alignment:
Q  179 tgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtcttaaagagagcgacctggtcgtgactca 275  Q
    ||||||||||||||| ||||||||||| || |||  |||||||||  || || | |||| |||||||||||||||| | |   ||||||||||||||    
T  40392414 tgttttatcctggagacggcgtggttgctagtctaccttgcacaa-cttaggtagtgccgcgaaacgtcttaaagaaaacagtctggtcgtgactca 40392319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0352 (Bit Score: 168; Significance: 6e-90; HSPs: 1)
Name: scaffold0352
Description:

Target: scaffold0352; HSP #1
Raw Score: 168; E-Value: 6e-90
Query Start/End: Original strand, 146 - 349
Target Start/End: Complemental strand, 7232 - 7029
Alignment:
Q  146 tgcagtagttaatcgaacagttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacg 245  Q
    |||||||||||| || |||||||||| || ||||||||||||||||||||||||||||||||| |||| |||||||||||||||||| ||||||||||||    
T  7232 tgcagtagttaaccgcacagttgtagctgagcttgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttgggcagtgccacgaaacg 7133  T
Q  246 tcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtggataatagaatttggaaatccaaatacaactgtttggaaatccaaaaaca 345  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||    
T  7132 tcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtagataatagaatttggaaatccaaatacaacagtttggaaatccaaaaaca 7033  T
Q  346 acag 349  Q
    ||||    
T  7032 acag 7029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 167; Significance: 2e-89; HSPs: 91)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 167; E-Value: 2e-89
Query Start/End: Original strand, 146 - 348
Target Start/End: Complemental strand, 31273649 - 31273447
Alignment:
Q  146 tgcagtagttaatcgaacagttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacg 245  Q
    |||||||||||| |  |||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||    
T  31273649 tgcagtagttaaccacacagttgtagctgggcttgttttatcctggaggcggcgtggttgatagtctgtcttgcacaattttgggcagtgccacgaaacg 31273550  T
Q  246 tcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtggataatagaatttggaaatccaaatacaactgtttggaaatccaaaaaca 345  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||| ||||||||    
T  31273549 tcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtagataatagaatttggaaatccaaatacaacagtttggaaattcaaaaaca 31273450  T
Q  346 aca 348  Q
    |||    
T  31273449 aca 31273447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 156; E-Value: 9e-83
Query Start/End: Original strand, 146 - 348
Target Start/End: Original strand, 5271386 - 5271586
Alignment:
Q  146 tgcagtagttaatcgaacagttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacg 245  Q
    |||| |||| |||| ||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||    
T  5271386 tgcaatagtgaatcaaacagttgtagttggacttgttttatcctggaggcggcgtggttgatagtctgtcttgcacaattttgggcagtgccacgaaacg 5271485  T
Q  246 tcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtggataatagaatttggaaatccaaatacaactgtttggaaatccaaaaaca 345  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||  ||| |||||||||||||||||||    
T  5271486 tcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtagataatagaatttggaaattcaaat--aacagtttggaaatccaaaaaca 5271583  T
Q  346 aca 348  Q
    |||    
T  5271584 aca 5271586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 155; E-Value: 3e-82
Query Start/End: Original strand, 146 - 348
Target Start/End: Original strand, 37259844 - 37260046
Alignment:
Q  146 tgcagtagttaatcgaacagttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacg 245  Q
    |||||||||||| || |||||||||| |||||||||||||||||||||||||||||||||||| |||| |||||||||||||| | | ||||||||||||    
T  37259844 tgcagtagttaaccgcacagttgtagctgggcttgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttgagtagtgccacgaaacg 37259943  T
Q  246 tcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtggataatagaatttggaaatccaaatacaactgtttggaaatccaaaaaca 345  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||| ||||||||    
T  37259944 tcttaaagaaagcgacctggtcgtgactcaacctagtaacaacttcggtagataatagaatttggaaatccaaatacaacagtttggaaattcaaaaaca 37260043  T
Q  346 aca 348  Q
    |||    
T  37260044 aca 37260046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 155; E-Value: 3e-82
Query Start/End: Original strand, 146 - 348
Target Start/End: Original strand, 37264531 - 37264733
Alignment:
Q  146 tgcagtagttaatcgaacagttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacg 245  Q
    |||||||||||| || ||| |||||| |||||||||||||||||||||||||||||||||||| |||| |||||| ||||||||||| ||||||||||||    
T  37264531 tgcagtagttaaccgcacaattgtagctgggcttgttttatcctggaggcggcgtggttgatagtctgccttgcataattttgggcagtgccacgaaacg 37264630  T
Q  246 tcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtggataatagaatttggaaatccaaatacaactgtttggaaatccaaaaaca 345  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||| |||||||||| ||||||||    
T  37264631 tcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcgatagataatagaatttggaaatccaaatacaacagtttggaaattcaaaaaca 37264730  T
Q  346 aca 348  Q
    |||    
T  37264731 aca 37264733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 153; E-Value: 5e-81
Query Start/End: Original strand, 146 - 350
Target Start/End: Complemental strand, 8693839 - 8693635
Alignment:
Q  146 tgcagtagttaatcgaacagttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacg 245  Q
    |||||||||||||||||||||||||| || |||||||||||||| |||||||||||||||||| | ||||||||||||||||||| |  |||||||||||    
T  8693839 tgcagtagttaatcgaacagttgtagctgagcttgttttatccttgaggcggcgtggttgatagtatgtcttgcacaattttgggtagcgccacgaaacg 8693740  T
Q  246 tcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtggataatagaatttggaaatccaaatacaactgtttggaaatccaaaaaca 345  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| | || ||||||||||||||||||||||||||| ||||| |||||||||||||    
T  8693739 tcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcgatagacaatagaatttggaaatccaaatacaacagtttgaaaatccaaaaaca 8693640  T
Q  346 acaga 350  Q
    |||||    
T  8693639 acaga 8693635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 149; E-Value: 1e-78
Query Start/End: Original strand, 146 - 346
Target Start/End: Complemental strand, 31269162 - 31268962
Alignment:
Q  146 tgcagtagttaatcgaacagttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacg 245  Q
    |||||||||||| |  || ||||||| ||| |||||||||||||||||||||||||||||||| |||| ||||||||||||| |||| ||||||||||||    
T  31269162 tgcagtagttaaccacacggttgtagctggacttgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttaggcagtgccacgaaacg 31269063  T
Q  246 tcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtggataatagaatttggaaatccaaatacaactgtttggaaatccaaaaaca 345  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||| ||||||||    
T  31269062 tcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtagataatagaatttggaaatccaaatacaacagtttggaaattcaaaaaca 31268963  T
Q  346 a 346  Q
    |    
T  31268962 a 31268962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 146 - 348
Target Start/End: Complemental strand, 16421157 - 16420956
Alignment:
Q  146 tgcagtagttaatcgaacagttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacg 245  Q
    |||||||||||| || |||||||||| |||||||||||||||||| ||||||||||||||||| |||| |||||||||||||||||| |||||||||| |    
T  16421157 tgcagtagttaaccgcacagttgtagctgggcttgttttatcctgtaggcggcgtggttgatagtctgccttgcacaattttgggcagtgccacgaaatg 16421058  T
Q  246 tcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtggataatagaatttggaaatccaaatacaactgtttggaaatccaaaaaca 345  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||| ||||||||| |||||||||||||||||||    
T  16421057 tcttaatgagagcgacctggtcgtgactcaacctagtaacaacttcggtagataatagaa-ttggaaatctaaatacaacagtttggaaatccaaaaaca 16420959  T
Q  346 aca 348  Q
    |||    
T  16420958 aca 16420956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 143; E-Value: 5e-75
Query Start/End: Original strand, 146 - 348
Target Start/End: Original strand, 5928186 - 5928388
Alignment:
Q  146 tgcagtagttaatcgaacagttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacg 245  Q
    ||||||||||||||||||||||| || ||||||||||||||||||||||||| |||||||||| |||| |||||||||||||| ||| |||||| ||||     
T  5928186 tgcagtagttaatcgaacagttgcagctgggcttgttttatcctggaggcggtgtggttgatagtctgccttgcacaattttgagcagtgccactaaaca 5928285  T
Q  246 tcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtggataatagaatttggaaatccaaatacaactgtttggaaatccaaaaaca 345  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||| || |||||||||||| ||||||||||| |||||||    
T  5928286 tcttaaagagagcgacctggtcgtgactcaacctggtaacaacttcggtagataatagaatttgaaactccaaatacaacagtttggaaatctaaaaaca 5928385  T
Q  346 aca 348  Q
    |||    
T  5928386 aca 5928388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 143; E-Value: 5e-75
Query Start/End: Original strand, 146 - 348
Target Start/End: Complemental strand, 55251847 - 55251647
Alignment:
Q  146 tgcagtagttaatcgaacagttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacg 245  Q
    |||||||||||| || ||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||| || ||||||||||||    
T  55251847 tgcagtagttaaccgtacagttgtagttgggcttgttttatcctggaggtggcgtggttgatagtctgtcttgcacaattttggacagtgccacgaaacg 55251748  T
Q  246 tcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtggataatagaatttggaaatccaaatacaactgtttggaaatccaaaaaca 345  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||  | |||||||||| ||||||||||||||||||| ||||||||||| |||||||    
T  55251747 tcttaaa-agagcgacctggtcgtgactcaacctagtaacaacttcaatagataatagaa-ttggaaatccaaatacaacagtttggaaatcgaaaaaca 55251650  T
Q  346 aca 348  Q
    |||    
T  55251649 aca 55251647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 135; E-Value: 3e-70
Query Start/End: Original strand, 146 - 348
Target Start/End: Original strand, 8030443 - 8030645
Alignment:
Q  146 tgcagtagttaatcgaacagttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacg 245  Q
    ||||||||||||||||||| |||||| ||||||||||||||||||||||| |||| ||||||| ||| ||||||||||||||||||| |||||| |||||    
T  8030443 tgcagtagttaatcgaacatttgtagctgggcttgttttatcctggaggcagcgttgttgatagtctatcttgcacaattttgggcagtgccacaaaacg 8030542  T
Q  246 tcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtggataatagaatttggaaatccaaatacaactgtttggaaatccaaaaaca 345  Q
    ||||||||||||||||||| | |||| |||||||||||||||||||||| |||||||||||||| |||| |||||||||| ||||| |||| ||||||||    
T  8030543 tcttaaagagagcgacctgattgtgattcaacctagtaacaacttcggtagataatagaatttgaaaattcaaatacaacagtttgaaaattcaaaaaca 8030642  T
Q  346 aca 348  Q
    |||    
T  8030643 aca 8030645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 135; E-Value: 3e-70
Query Start/End: Original strand, 144 - 314
Target Start/End: Original strand, 33463321 - 33463491
Alignment:
Q  144 aatgcagtagttaatcgaacagttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaa 243  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||| |||||| ||||||||| ||||| || ||||||||||    
T  33463321 aatgcagtagttaatcgaacagttgtagttgtgcttgttttatcctggaggcggcggggttgacaatctgccttgcacaactttggacagtgccacgaaa 33463420  T
Q  244 cgtcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtggataatagaatttggaaat 314  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||    
T  33463421 cgtcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcgatagataatagaatttggaaat 33463491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 133; E-Value: 5e-69
Query Start/End: Original strand, 177 - 348
Target Start/End: Original strand, 13521990 - 13522162
Alignment:
Q  177 cttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtcttaaagagagcgacctggtcgtgactcaa 276  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  13521990 cttgttttatcctggaggcggcgtggttgatagtctgtcttgcacaattttgggcagtgccacgaaacgtcttaaagagagcgacctggtcgtgactcaa 13522089  T
Q  277 cctagtaacaacttcggtggataatagaatttggaaatcc-aaatacaactgtttggaaatccaaaaacaaca 348  Q
    |||||||||||||||||| || || |||||||||||| || ||||||||| ||||| ||||||||||||||||    
T  13522090 cctagtaacaacttcggtagaaaacagaatttggaaaaccaaaatacaacagtttgaaaatccaaaaacaaca 13522162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 130; E-Value: 3e-67
Query Start/End: Original strand, 146 - 343
Target Start/End: Original strand, 33468940 - 33469137
Alignment:
Q  146 tgcagtagttaatcgaacagttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacg 245  Q
    ||||||||||||||||||| |||||| || |||||||||||| |||||| ||||||||||| | |||| ||||||||| |||||||| |||||| |||||    
T  33468940 tgcagtagttaatcgaacaattgtagctgagcttgttttatcatggaggtggcgtggttgacagtctgccttgcacaactttgggcagtgccacaaaacg 33469039  T
Q  246 tcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtggataatagaatttggaaatccaaatacaactgtttggaaatccaaaaa 343  Q
    ||||||||||| |||||| ||||||||||||||||||||||||||| || |||||||||||||| ||||||||||||||| |||||||||||||||||    
T  33469040 tcttaaagagaacgacctagtcgtgactcaacctagtaacaacttcagtagataatagaatttgaaaatccaaatacaacagtttggaaatccaaaaa 33469137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 146 - 350
Target Start/End: Complemental strand, 19102105 - 19101901
Alignment:
Q  146 tgcagtagttaatcgaacagttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacg 245  Q
    |||||||||||| || |||||||||||||| |||||||||||||||||||| ||||||||||| ||||| ||||||||||||| | | ||||||||||||    
T  19102105 tgcagtagttaaccgcacagttgtagttggacttgttttatcctggaggcgacgtggttgatagtctgttttgcacaattttgagtagtgccacgaaacg 19102006  T
Q  246 tcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtggataatagaatttggaaatccaaatacaactgtttggaaatccaaaaaca 345  Q
    ||||||| |||| ||||| ||||||||| |||||||||||||||| | | |||||||||||||||||||||||||||||| ||||  |||||||||||||    
T  19102005 tcttaaacagagtgacctcgtcgtgacttaacctagtaacaactttgatagataatagaatttggaaatccaaatacaacagtttataaatccaaaaaca 19101906  T
Q  346 acaga 350  Q
    |||||    
T  19101905 acaga 19101901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 128; E-Value: 5e-66
Query Start/End: Original strand, 177 - 348
Target Start/End: Original strand, 12823893 - 12824064
Alignment:
Q  177 cttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtcttaaagagagcgacctggtcgtgactcaa 276  Q
    |||||||||||||||||||||||||||||||| | ||||||||||||||||||||| |||||||||| ||||||||||||||||||||||| ||||||||    
T  12823893 cttgttttatcctggaggcggcgtggttgatagtttgtcttgcacaattttgggcagtgccacgaaatgtcttaaagagagcgacctggtcatgactcaa 12823992  T
Q  277 cctagtaacaacttcggtggataatagaatttggaaatccaaatacaactgtttggaaatccaaaaacaaca 348  Q
    |||| ||||||||||||| || ||||||||||||||||||||||||||| |||| |||||| ||||||||||    
T  12823993 cctaataacaacttcggtagaaaatagaatttggaaatccaaatacaacagtttagaaatcaaaaaacaaca 12824064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 146 - 348
Target Start/End: Original strand, 32082058 - 32082259
Alignment:
Q  146 tgcagtagttaatcgaacagttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacg 245  Q
    |||||||||||| || ||| |||||  || ||||||||||||||||||||||||||||||||| | || ||||||||||||||| || ||||| |||| |    
T  32082058 tgcagtagttaaccgcacaattgtaactgagcttgttttatcctggaggcggcgtggttgatagt-tgccttgcacaattttggacagtgccatgaaatg 32082156  T
Q  246 tcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtggataatagaatttggaaatccaaatacaactgtttggaaatccaaaaaca 345  Q
    ||||||| |||| || ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||    
T  32082157 tcttaaaaagagtgatctggtcgtgactcaacctagtaacaacttcggttgataatagaatttggaaatccaaatacaacagtttggaaatccaaaaaca 32082256  T
Q  346 aca 348  Q
    |||    
T  32082257 aca 32082259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 158 - 325
Target Start/End: Complemental strand, 31766002 - 31765831
Alignment:
Q  158 tcgaacagttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtcttaaagagag 257  Q
    |||||||||||||| ||| |||||||||||||||||||||||||||||||| |||| |||||||||||||||||| ||||||||||||||||||||||||    
T  31766002 tcgaacagttgtagctggacttgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttgggcagtgccacgaaacgtcttaaagagag 31765903  T
Q  258 cgacctggtcgtgactcaacctagtaacaacttcggtgga----taatagaatttggaaatccaaatacaac 325  Q
     |||||||| ||||||||||||||||||||||||||| ||    |||||||||||||||||||||| |||||    
T  31765902 tgacctggttgtgactcaacctagtaacaacttcggtagataattaatagaatttggaaatccaaaaacaac 31765831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 151 - 346
Target Start/End: Complemental strand, 51698040 - 51697841
Alignment:
Q  151 tagttaatcgaacagttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtctta 250  Q
    ||||||| || ||| ||||||||| ||||||||||||||||||||||||||||||||| |||| |||||||||||||| ||| || || |||||||||||    
T  51698040 tagttaaccgcacaattgtagttgagcttgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttgagcagtgtcatgaaacgtctta 51697941  T
Q  251 aagagagcgacctggtcgtgactcaacctagtaacaacttcggtggataata----gaatttggaaatccaaatacaactgtttggaaatccaaaaacaa 346  Q
    || ||||||| ||||||||||||||||||||||||||||||||| |||||||    ||||||||||||||||||||||  ||||| ||||||||||||||    
T  51697940 aaaagagcgatctggtcgtgactcaacctagtaacaacttcggtagataatagaatgaatttggaaatccaaatacaatagtttgaaaatccaaaaacaa 51697841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 144 - 330
Target Start/End: Complemental strand, 13059540 - 13059354
Alignment:
Q  144 aatgcagtagttaatcgaacagttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaa 243  Q
    |||||||||||||| |  |||||||||| || ||||||||||| || ||||||| |||||||||| ||||||||||||||||||  ||| ||||||||||    
T  13059540 aatgcagtagttaaccacacagttgtagctgagcttgttttattctagaggcggagtggttgatagtctgtcttgcacaattttatgcagtgccacgaaa 13059441  T
Q  244 cgtcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtggataatagaatttggaaatccaaatacaactgttt 330  Q
    ||||||||||||||||| |||||| |||||||||||||||| ||||||||| |||||||||||||| ||||||||||||||| ||||    
T  13059440 cgtcttaaagagagcgatctggtcatgactcaacctagtaataacttcggtagataatagaatttgaaaatccaaatacaacagttt 13059354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 146 - 336
Target Start/End: Complemental strand, 47244376 - 47244186
Alignment:
Q  146 tgcagtagttaatcgaacagttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacg 245  Q
    |||||||||||| || ||||||||||||| ||||||||||||||||||||||||||||||||| ||| ||||  | |||||||  || ||||||||||||    
T  47244376 tgcagtagttaaccgcacagttgtagttgtgcttgttttatcctggaggcggcgtggttgatagtctttcttcaataattttgaacagtgccacgaaacg 47244277  T
Q  246 tcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtggataatagaatttggaaatccaaatacaactgtttggaaat 336  Q
    |||||||||| |||||||| ||||||||||||||| ||||||||||| | ||||||| |||||||||||||||||||||| |||| |||||    
T  47244276 tcttaaagagggcgacctgatcgtgactcaacctactaacaacttcgatagataatataatttggaaatccaaatacaacagtttagaaat 47244186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 146 - 292
Target Start/End: Original strand, 42758722 - 42758868
Alignment:
Q  146 tgcagtagttaatcgaacagttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacg 245  Q
    ||||||||||||||| ||||||||  |||| || ||||||| ||||||||| ||||||||||| ||||||||||||||||||||||| |||||||||||     
T  42758722 tgcagtagttaatcgcacagttgtttttggactagttttattctggaggcgacgtggttgatagtctgtcttgcacaattttgggcagtgccacgaaaca 42758821  T
Q  246 tcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcg 292  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  42758822 tcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcg 42758868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 106; E-Value: 6e-53
Query Start/End: Original strand, 11 - 148
Target Start/End: Original strand, 37262848 - 37262985
Alignment:
Q  11 cacagaataattagagagctctaaaaggaacggttaaagtatatcgtgcacgtactgataaagaattattcaatcctttgacgaaaggaattactagaaa 110  Q
    |||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||    
T  37262848 cacagaatgattagagagctctaaaaggaacgattaaagtatatcgtgcacgtactgataaagaattagtaaatcctttgacgaaaggaattactagaaa 37262947  T
Q  111 gaaagtcataaacacatccaataggatgtgactaatgc 148  Q
    ||||||| |||||||||| ||||||||  |||||||||    
T  37262948 gaaagtcctaaacacatctaataggataagactaatgc 37262985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 178 - 348
Target Start/End: Complemental strand, 19106715 - 19106545
Alignment:
Q  178 ttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtcttaaagagagcgacctggtcgtgactcaac 277  Q
    ||||||||| ||||||||| ||||||||||| || | |||||||||||||||||| ||| | ||||||||||||||| ||||| ||| | ||||||||||    
T  19106715 ttgttttattctggaggcgacgtggttgatagtcagccttgcacaattttgggcagtgctatgaaacgtcttaaagaaagcgatctgcttgtgactcaac 19106616  T
Q  278 ctagtaacaacttcggtggataatagaatttggaaatccaaatacaactgtttggaaatccaaaaacaaca 348  Q
    ||||||||||||||||| |||||||||||||||||||||||||||| |  |||| ||||||||||||||||    
T  19106615 ctagtaacaacttcggtagataatagaatttggaaatccaaatacagcaatttgaaaatccaaaaacaaca 19106545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 147 - 331
Target Start/End: Complemental strand, 47574752 - 47574567
Alignment:
Q  147 gcagtagttaatcgaacagttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgt 246  Q
    ||||||||||| || |||||||||| ||| |||||||||||||||| |||||||| |||||| | ||||||||||||||||||| | || || |||||||    
T  47574752 gcagtagttaaccgcacagttgtagctggacttgttttatcctggatgcggcgtgattgatattttgtcttgcacaattttgggtagtgtcaagaaacgt 47574653  T
Q  247 cttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtggataatagaatttgg-aaatccaaatacaactgtttg 331  Q
    |||||||||||||||||| | ||||||||||||| |||||| |||||| ||||||||||||||| ||||| ||||||||| |||||    
T  47574652 cttaaagagagcgacctgattgtgactcaacctaataacaaattcggtagataatagaatttggaaaatcaaaatacaacagtttg 47574567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 11 - 146
Target Start/End: Complemental strand, 13061274 - 13061140
Alignment:
Q  11 cacagaataattagagagctctaaaaggaacggttaaagtatatcgtgcacgtactgataaagaattattcaatcctttgacgaaaggaattactagaaa 110  Q
    |||| |||||||||||||||||||||||||| ||||||||||||| |||| ||||||||||||||||| ||||||||||||||||||||| || ||||||    
T  13061274 cacaaaataattagagagctctaaaaggaacagttaaagtatatcatgcatgtactgataaagaattagtcaatcctttgacgaaaggaaataatagaaa 13061175  T
Q  111 gaaagtcataaacacatccaataggatgtgactaat 146  Q
    ||||||| |||||||||||||||||||| |||||||    
T  13061174 gaaagtc-taaacacatccaataggatgggactaat 13061140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 11 - 148
Target Start/End: Original strand, 33467346 - 33467483
Alignment:
Q  11 cacagaataattagagagctctaaaaggaacggttaaagtatatcgtgcacgtactgataaagaattattcaatcctttgacgaaaggaattactagaaa 110  Q
    ||||||||||  ||||||||||||||||||||||||||||||| | ||||||||||||| |||||||| |  ||||||||||||||||||||||||||||    
T  33467346 cacagaataaccagagagctctaaaaggaacggttaaagtataacatgcacgtactgatgaagaattagttgatcctttgacgaaaggaattactagaaa 33467445  T
Q  111 gaaagtcataaacacatccaataggatgtgactaatgc 148  Q
    ||||||| |||||||||||||||||||| || ||||||    
T  33467446 gaaagtcctaaacacatccaataggatgagattaatgc 33467483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 147 - 315
Target Start/End: Complemental strand, 19906377 - 19906210
Alignment:
Q  147 gcagtagttaatcgaacagttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgt 246  Q
    |||||||||| || |||||||||||||| ||||||||||||||||||||||||  ||||||| |||||||||||||||||| | || || |||  |||||    
T  19906377 gcagtagtta-tcaaacagttgtagttgagcttgttttatcctggaggcggcggagttgatagtctgtcttgcacaattttagacagtgtcactgaacgt 19906279  T
Q  247 cttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtggataatagaatttggaaatc 315  Q
    |||||| ||||||||||| ||||||||||||||| ||| ||||||||| ||||||| |||||| |||||    
T  19906278 cttaaaaagagcgacctgatcgtgactcaacctaataataacttcggtagataataaaatttgaaaatc 19906210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 11 - 148
Target Start/End: Complemental strand, 12876147 - 12876011
Alignment:
Q  11 cacagaataattagagagctctaaaaggaacggttaaagtatatcgtgcacgtactgataaagaattattcaatcctttgacgaaaggaattactagaaa 110  Q
    |||| |||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||| |  ||||||||||||||||||| ||||||||    
T  12876147 cacataataattagagagctctaaa-ggaacggttaaagtaaatcgtgcacgtactgataaagaattagttgatcctttgacgaaaggaataactagaaa 12876049  T
Q  111 gaaagtcataaacacatccaataggatgtgactaatgc 148  Q
    |||||||  ||||||||||||  ||||| |||||||||    
T  12876048 gaaagtccaaaacacatccaacgggatgggactaatgc 12876011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 146 - 348
Target Start/End: Original strand, 48276616 - 48276807
Alignment:
Q  146 tgcagtagttaatcgaacagttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacg 245  Q
    |||||||||||||||||||||||||| ||  |||||||||||||||||||||||||||||||| |     |||||||||||||  || ||| || |||||    
T  48276616 tgcagtagttaatcgaacagttgtagctgaacttgttttatcctggaggcggcgtggttgatagt-----ttgcacaattttgaacagtgcaacaaaacg 48276710  T
Q  246 tcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtggataatagaatttggaaatccaaatacaactgtttggaaatccaaaaaca 345  Q
    ||||||||||||||||||| |||||| |||||||||||  ||||| ||| |||    |||||||||||||||||||||||  |||  ||||||||||| |    
T  48276711 tcttaaagagagcgacctgatcgtgattcaacctagta--aacttgggtagat----gaatttggaaatccaaatacaacaatttaaaaatccaaaaaga 48276804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 245 - 348
Target Start/End: Original strand, 32221163 - 32221266
Alignment:
Q  245 gtcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtggataatagaatttggaaatccaaatacaactgtttggaaatccaaaaac 344  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||| |||||||||||||||  |||| ||||||||||||    
T  32221163 gtcttaaagagagcgacctggtcgtgactcaacctagtaacaatttcggtagataatagaatttgaaaatccaaatacaacaatttgaaaatccaaaaac 32221262  T
Q  345 aaca 348  Q
    ||||    
T  32221263 aaca 32221266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 146 - 348
Target Start/End: Original strand, 31729354 - 31729540
Alignment:
Q  146 tgcagtagttaatcgaacagttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacg 245  Q
    |||||||||||| || ||||||| || ||| ||||||||||||||||||||||||| |||||  |||| |||||||||||||||| | ||||||||||||    
T  31729354 tgcagtagttaaccgcacagttgcagctggacttgttttatcctggaggcggcgtgattgattgtctgccttgcacaattttgggtagtgccacgaaacg 31729453  T
Q  246 tcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtggataatagaatttggaaatccaaatacaactgtttggaaatccaaaaaca 345  Q
    ||||||||||||||||||| || ||                ||||| || |||||||||| ||||||||||||||||| | |||||||||||||||||||    
T  31729454 tcttaaagagagcgacctgatcatg----------------acttcagtagataatagaacttggaaatccaaatacagcagtttggaaatccaaaaaca 31729537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 144 - 287
Target Start/End: Original strand, 19541126 - 19541269
Alignment:
Q  144 aatgcagtagttaatcgaacagttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaa 243  Q
    |||||||||||||||||||| ||||||| ||| |||||||||||||  ||||||||||||||||| ||||||||| ||||||||   || ||||||||||    
T  19541126 aatgcagtagttaatcgaactgttgtagctggacttgttttatcctataggcggcgtggttgatagtctgtcttgtacaattttaaacaatgccacgaaa 19541225  T
Q  244 cgtcttaaagagagcgacctggtcgtgactcaacctagtaacaa 287  Q
      ||||||| ||| ||| ||| ||||||||||||||||||||||    
T  19541226 tatcttaaaaagaacgatctgatcgtgactcaacctagtaacaa 19541269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 204 - 342
Target Start/End: Complemental strand, 51697072 - 51696931
Alignment:
Q  204 tgataatctgtcttgcacaattttgggcattgccacgaaacgtcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtggataata- 302  Q
    ||||| |||| |||||||||||||||||| ||||| |||||||||||| ||||||||||||||||||||||||||||||||||| || | | |||||||     
T  51697072 tgatagtctgccttgcacaattttgggcagtgccatgaaacgtcttaaggagagcgacctggtcgtgactcaacctagtaacaa-tttgatagataatag 51696974  T
Q  303 ---gaatttggaaatccaaatacaactgtttggaaatccaaaa 342  Q
       ||||||| ||||||||||||||  ||||||||||||||||    
T  51696973 aatgaatttgaaaatccaaatacaaaagtttggaaatccaaaa 51696931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 33 - 148
Target Start/End: Original strand, 7899184 - 7899300
Alignment:
Q  33 aaaaggaacggttaaagtatatcgtgcacgtactgat-aaagaattattcaatcctttgacgaaaggaattactagaaagaaagtcataaacacatccaa 131  Q
    ||||||||| ||||||||||||| || |||||||||| ||||||||| ||||||||||||||||| ||||| |||||||||||||| |||||||||||||    
T  7899184 aaaaggaacagttaaagtatatcttgtacgtactgatgaaagaattagtcaatcctttgacgaaacgaattgctagaaagaaagtcctaaacacatccaa 7899283  T
Q  132 taggatgtgactaatgc 148  Q
    ||||||| ||| |||||    
T  7899284 taggatgggacaaatgc 7899300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 33 - 144
Target Start/End: Complemental strand, 19103764 - 19103653
Alignment:
Q  33 aaaaggaacggttaaagtatatcgtgcacgtactgataaagaattattcaatcctttgacgaaaggaattactagaaagaaagtcataaacacatccaat 132  Q
    |||||||||||||||| || ||| || ||||||||||| ||||||| |||||||||||||||||| ||||||||||||||||||| |||||||||| |||    
T  19103764 aaaaggaacggttaaaatagatcatgtacgtactgatacagaattagtcaatcctttgacgaaagaaattactagaaagaaagtcctaaacacatcaaat 19103665  T
Q  133 aggatgtgacta 144  Q
    |||||| |||||    
T  19103664 aggatgggacta 19103653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 162 - 291
Target Start/End: Complemental strand, 12878351 - 12878222
Alignment:
Q  162 acagttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtcttaaagagagcgac 261  Q
    |||||||||| ||  |||||||||| ||||||| |||||| |||||| ||||  |||||||||||||   | || |||||||||||||||||||||||||    
T  12878351 acagttgtagctgaacttgttttattctggaggtggcgtgattgatagtctgctttgcacaattttgaaaagtgtcacgaaacgtcttaaagagagcgac 12878252  T
Q  262 ctggtcgtgactcaacctagtaacaacttc 291  Q
    ||| ||||||||||||||||||||||||||    
T  12878251 ctgatcgtgactcaacctagtaacaacttc 12878222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 189 - 299
Target Start/End: Original strand, 13065778 - 13065888
Alignment:
Q  189 tggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtcttaaagagagcgacctggtcgtgactcaacctagtaacaac 288  Q
    ||||||| |||||||||||| |||  ||| ||||| |||||||| ||||| |||||||||||||||||||||| | ||||||||||||||||||||||||    
T  13065778 tggaggctgcgtggttgatagtctccctttcacaactttgggcagtgccatgaaacgtcttaaagagagcgacatagtcgtgactcaacctagtaacaac 13065877  T
Q  289 ttcggtggata 299  Q
    |||||| ||||    
T  13065878 ttcggtagata 13065888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 177 - 292
Target Start/End: Complemental strand, 2819941 - 2819826
Alignment:
Q  177 cttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtcttaaagagagcgacctggtcgtgactcaa 276  Q
    |||||||||||||||| ||||| |||| |||| |||  ||||||||||||||| || | ||||||||| ||||||||| | |||||||||||||||||||    
T  2819941 cttgttttatcctggacgcggcatggtagatagtctaccttgcacaattttggacagtaccacgaaacatcttaaagaaaacgacctggtcgtgactcaa 2819842  T
Q  277 cctagtaacaacttcg 292  Q
     |||||||||||||||    
T  2819841 tctagtaacaacttcg 2819826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 146 - 292
Target Start/End: Complemental strand, 4551125 - 4550980
Alignment:
Q  146 tgcagtagttaatcgaacagttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacg 245  Q
    ||||||||||||||| | ||||||| ||| | ||||||||||||||||||||||| ||||||| |||||||||||||| |||| ||| || ||  ||| |    
T  4551125 tgcagtagttaatcgcagagttgtaattgagtttgttttatcctggaggcggcgtagttgatagtctgtcttgcacaactttgagcagtggcataaaatg 4551026  T
Q  246 tcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcg 292  Q
    |||||||  || ||||||  || ||||||||||||||||||||||||    
T  4551025 tcttaaa-tgaacgacctaatcatgactcaacctagtaacaacttcg 4550980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 149 - 291
Target Start/End: Complemental strand, 12874664 - 12874522
Alignment:
Q  149 agtagttaatcgaacagttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtct 248  Q
    ||||||||| || ||| || ||| || |||||||||||||||||||||||||| |||||  ||||  |||||||||||| | || |||||||||  ||||    
T  12874664 agtagttaaccgcacaattttagctgagcttgttttatcctggaggcggcgtgattgatggtctgctttgcacaattttagacagtgccacgaattgtct 12874565  T
Q  249 taaagagagcgacctggtcgtgactcaacctagtaacaacttc 291  Q
    |||||||||||| ||| | ||||||||||||| ||||||||||    
T  12874564 taaagagagcgatctgattgtgactcaacctaataacaacttc 12874522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 168 - 292
Target Start/End: Original strand, 1151286 - 1151411
Alignment:
Q  168 gtagttgggcttgttttatcctggagg-cggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtcttaaagagagcgacctggt 266  Q
    ||||||| ||||||||||| ||||||| ||||||| |||||| |  |||||||||||||||||  | || || |||||||||||||||||| || ||| |    
T  1151286 gtagttgtgcttgttttatactggagggcggcgtgattgatagttagtcttgcacaattttggatagtgtcatgaaacgtcttaaagagagtgatctgat 1151385  T
Q  267 cgtgactcaacctagtaacaacttcg 292  Q
    || |||||||||||||||||||||||    
T  1151386 cgcgactcaacctagtaacaacttcg 1151411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 33 - 148
Target Start/End: Original strand, 8028637 - 8028753
Alignment:
Q  33 aaaaggaacggttaaagtatatcgtgcacgtactgataaagaattattcaatcctttgacgaaagg-aattactagaaagaaagtcataaacacatccaa 131  Q
    ||||||||| ||||||  ||||| || || ||||||||||||| || ||||||||||||||||||| ||||||||||||||||| | |||||| ||||||    
T  8028637 aaaaggaacagttaaaacatatcatgtacatactgataaagaactagtcaatcctttgacgaaaggaaattactagaaagaaagacctaaacatatccaa 8028736  T
Q  132 taggatgtgactaatgc 148  Q
    ||||||| || ||||||    
T  8028737 taggatgggaataatgc 8028753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 146 - 300
Target Start/End: Complemental strand, 32545223 - 32545068
Alignment:
Q  146 tgcagtagttaatcgaacagttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttg-cacaa-ttttgggcattgccacgaaa 243  Q
    ||||||||||| ||| ||| ||||||||| |||||||||||| ||||  |  ||||||||||| ||||||||| ||||| |||| |||  ||||||||||    
T  32545223 tgcagtagttagtcgcacaattgtagttgagcttgttttatcatggatacaacgtggttgatagtctgtcttgacacaatttttaggcggtgccacgaaa 32545124  T
Q  244 cgtcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtggataa 300  Q
    | ||||||| |||  |||||| |||||||||||||||||||||||||| || |||||    
T  32545123 catcttaaa-agattgacctgatcgtgactcaacctagtaacaacttcagtagataa 32545068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 35 - 148
Target Start/End: Complemental strand, 12316395 - 12316282
Alignment:
Q  35 aaggaacggttaaagtatatcgtgcacgtactgataaagaattattcaatcctttgacgaaaggaattactagaaagaaagtcataaacacatccaatag 134  Q
    ||||||||||||||||| ||  || ||||||| || | || ||| |  ||||||||||||||||||| ||||||||||||||| |||||||||||| |||    
T  12316395 aaggaacggttaaagtagattatgtacgtactaatgatgacttagtttatcctttgacgaaaggaataactagaaagaaagtcctaaacacatccagtag 12316296  T
Q  135 gatgtgactaatgc 148  Q
    |||| |||||||||    
T  12316295 gatgggactaatgc 12316282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 179 - 275
Target Start/End: Complemental strand, 653138 - 653043
Alignment:
Q  179 tgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtcttaaagagagcgacctggtcgtgactca 275  Q
    ||||||||||||||| ||||||||||| || |||  ||||||||| || ||| | |||| |||||||||||||||||||||||||||||||||||||    
T  653138 tgttttatcctggagacggcgtggttgttagtctaccttgcacaaatt-gggtagtgccgcgaaacgtcttaaagagagcgacctggtcgtgactca 653043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 181 - 284
Target Start/End: Original strand, 10120811 - 10120913
Alignment:
Q  181 ttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtcttaaagagagcgacctggtcgtgactcaaccta 280  Q
    ||||||||||||| ||||||||||| || |||  ||||||||| || ||| | |||| |||||||||||||||||||||||||| ||||||||||||||     
T  10120811 ttttatcctggagacggcgtggttgttagtctaccttgcacaactt-gggtagtgccgcgaaacgtcttaaagagagcgacctgatcgtgactcaacctg 10120909  T
Q  281 gtaa 284  Q
    ||||    
T  10120910 gtaa 10120913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 176 - 252
Target Start/End: Complemental strand, 16953183 - 16953107
Alignment:
Q  176 gcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtcttaaa 252  Q
    |||||||||||||||||||||  |||||||||| |||| |||||||||||||||| | | |||||||||||||||||    
T  16953183 gcttgttttatcctggaggcgttgtggttgatagtctgccttgcacaattttgggtagtaccacgaaacgtcttaaa 16953107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 149 - 285
Target Start/End: Complemental strand, 16948126 - 16947994
Alignment:
Q  149 agtagttaatcgaacagttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtct 248  Q
    |||||||||||| ||||||||   ||  |||||||||||||||||||||||| |||||||    ||||||||||||||| |||| | ||| ||| |||||    
T  16948126 agtagttaatcgcacagttgtcaatgaacttgttttatcctggaggcggcgtagttgata----gtcttgcacaattttaggcagtaccatgaatcgtct 16948031  T
Q  249 taaagagagcgacctggtcgtgactcaacctagtaac 285  Q
    | || |||| ||| ||||| |||||||||| ||||||    
T  16948030 tgaaaagagtgacatggtcatgactcaacccagtaac 16947994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 289 - 347
Target Start/End: Original strand, 55810257 - 55810315
Alignment:
Q  289 ttcggtggataatagaatttggaaatccaaatacaactgtttggaaatccaaaaacaac 347  Q
    |||||| |||||||||||||||||||||||||||||| ||||| |||||||||||||||    
T  55810257 ttcggtagataatagaatttggaaatccaaatacaacagtttgaaaatccaaaaacaac 55810315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 178 - 263
Target Start/End: Original strand, 16595933 - 16596017
Alignment:
Q  178 ttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtcttaaagagagcgacct 263  Q
    |||||||||||||| | || ||||||||| | |||| ||||||||||||||| || |||||| |||||||||||||||||||||||    
T  16595933 ttgttttatcctggggacgtcgtggttgacagtctg-cttgcacaattttggacagtgccacaaaacgtcttaaagagagcgacct 16596017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 178 - 263
Target Start/End: Complemental strand, 20513202 - 20513118
Alignment:
Q  178 ttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtcttaaagagagcgacct 263  Q
    ||||||||||||||   || ||||||||||| |||| |||||||||||||| ||| ||||||||||| ||||||||||||||||||    
T  20513202 ttgttttatcctgggaacgtcgtggttgatagtctg-cttgcacaattttgagcagtgccacgaaacatcttaaagagagcgacct 20513118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 179 - 275
Target Start/End: Complemental strand, 36354271 - 36354176
Alignment:
Q  179 tgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtcttaaagagagcgacctggtcgtgactca 275  Q
    ||||||||||||||| ||||| ||||| || |||  |||||||||||  ||  | |||| |||||||||||||||||||||||||||||||||||||    
T  36354271 tgttttatcctggagacggcgcggttgctagtctaccttgcacaattcaggt-agtgccgcgaaacgtcttaaagagagcgacctggtcgtgactca 36354176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 179 - 275
Target Start/End: Complemental strand, 36359389 - 36359294
Alignment:
Q  179 tgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtcttaaagagagcgacctggtcgtgactca 275  Q
    ||||||||||||||| ||||| ||||| || |||  |||||||||||  ||  | |||| |||||||||||||||||||||||||||||||||||||    
T  36359389 tgttttatcctggagacggcgcggttgctagtctaccttgcacaattcaggt-agtgccgcgaaacgtcttaaagagagcgacctggtcgtgactca 36359294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 179 - 275
Target Start/End: Complemental strand, 39999164 - 39999069
Alignment:
Q  179 tgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtcttaaagagagcgacctggtcgtgactca 275  Q
    ||||||||||||||| ||||| ||||| || |||  |||||||||||  ||  | |||| |||||||||||||||||||||||||||||||||||||    
T  39999164 tgttttatcctggagacggcgcggttgctagtctaccttgcacaattcaggt-agtgccgcgaaacgtcttaaagagagcgacctggtcgtgactca 39999069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 179 - 275
Target Start/End: Complemental strand, 40004122 - 40004027
Alignment:
Q  179 tgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtcttaaagagagcgacctggtcgtgactca 275  Q
    ||||||||||||||| ||||| ||||| || |||  |||||||||||  ||  | |||| |||||||||||||||||||||||||||||||||||||    
T  40004122 tgttttatcctggagacggcgcggttgctagtctaccttgcacaattcaggt-agtgccgcgaaacgtcttaaagagagcgacctggtcgtgactca 40004027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 179 - 275
Target Start/End: Complemental strand, 53797724 - 53797629
Alignment:
Q  179 tgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtcttaaagagagcgacctggtcgtgactca 275  Q
    ||||||||||||||| ||||| ||||| || |||  |||||||||||| ||  | |||| |||||||||||||||| ||||||||||||||||||||    
T  53797724 tgttttatcctggagacggcgcggttgctagtctaccttgcacaatttaggt-agtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactca 53797629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 179 - 275
Target Start/End: Complemental strand, 54343298 - 54343203
Alignment:
Q  179 tgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtcttaaagagagcgacctggtcgtgactca 275  Q
    |||||||||||| || ||||| ||||| || |||  |||||||||||  ||| | |||| |||||||||||||||||||||||||||||||||||||    
T  54343298 tgttttatcctgtagacggcgcggttgctagtctaccttgcacaattc-gggtagtgccgcgaaacgtcttaaagagagcgacctggtcgtgactca 54343203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 179 - 275
Target Start/End: Complemental strand, 54348452 - 54348357
Alignment:
Q  179 tgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtcttaaagagagcgacctggtcgtgactca 275  Q
    ||||||||||||||| ||||| ||||| || |||  |||||||||||  ||  | |||| |||||||||||||||||||||||||||||||||||||    
T  54348452 tgttttatcctggagacggcgcggttgctagtctaccttgcacaattcaggt-agtgccgcgaaacgtcttaaagagagcgacctggtcgtgactca 54348357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 162 - 284
Target Start/End: Original strand, 33722904 - 33723025
Alignment:
Q  162 acagttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtcttaaagagagcgac 261  Q
    |||||||||| |||||| |||||||||||| | || |||||| |||  |||| ||||||||||||||| || || ||||||||||||||||||||| |||    
T  33722904 acagttgtagctgggct-gttttatcctggggacgtcgtggtcgatggtctg-cttgcacaattttggacagtgtcacgaaacgtcttaaagagagtgac 33723001  T
Q  262 ctggt-cgtgactcaacctagtaa 284  Q
    || || || |||||| ||||||||    
T  33723002 ctagtccgcgactcagcctagtaa 33723025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 166 - 263
Target Start/End: Original strand, 15020454 - 15020549
Alignment:
Q  166 ttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtcttaaagagagcgacct 263  Q
    ||||||||| ||| ||||||||||||  ||| ||||||||||| ||||| ||||||||||||||| | || |||||||||| ||||||||||| ||||    
T  15020454 ttgtagttgtgct-gttttatcctgggagcgtcgtggttgatagtctgt-ttgcacaattttgggaagtgtcacgaaacgttttaaagagagcaacct 15020549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 213 - 282
Target Start/End: Original strand, 52691089 - 52691158
Alignment:
Q  213 gtcttgcacaattttgggcattgccacgaaacgtcttaaagagagcgacctggtcgtgactcaacctagt 282  Q
    ||||||||||||||||||||  | ||| ||||||||||||||||||||  || |||||||||||||||||    
T  52691089 gtcttgcacaattttgggcagagtcacaaaacgtcttaaagagagcgatatgatcgtgactcaacctagt 52691158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 214 - 290
Target Start/End: Complemental strand, 6070647 - 6070571
Alignment:
Q  214 tcttgcacaattttgggcattgccacgaaacgtcttaaagagagcgacctggtcgtgactcaacctagtaacaactt 290  Q
    ||||||||||||||   || ||||| ||||| ||||||||||||||| |||||| |||||||| |||||||||||||    
T  6070647 tcttgcacaattttaaacaatgccaggaaacatcttaaagagagcgatctggtcatgactcaatctagtaacaactt 6070571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 179 - 275
Target Start/End: Original strand, 8980285 - 8980380
Alignment:
Q  179 tgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtcttaaagagagcgacctggtcgtgactca 275  Q
    ||||||||||||||| ||||| ||||| || |||  ||||||||| || ||  | |||| |||||||||||||||| ||||||||||||||||||||    
T  8980285 tgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggt-agtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactca 8980380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 179 - 275
Target Start/End: Original strand, 8985405 - 8985500
Alignment:
Q  179 tgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtcttaaagagagcgacctggtcgtgactca 275  Q
    ||||||||||||||| ||||| ||||| || |||  ||||||||| || ||  | |||| |||||||||||||||| ||||||||||||||||||||    
T  8985405 tgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggt-agtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactca 8985500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 179 - 275
Target Start/End: Complemental strand, 13700605 - 13700510
Alignment:
Q  179 tgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtcttaaagagagcgacctggtcgtgactca 275  Q
    ||||||||||||||| ||||| ||||| || |||  ||||||||| || ||  | |||| |||||||||||||||| ||||||||||||||||||||    
T  13700605 tgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggt-agtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactca 13700510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 179 - 275
Target Start/End: Original strand, 21299833 - 21299928
Alignment:
Q  179 tgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtcttaaagagagcgacctggtcgtgactca 275  Q
    ||||||||||||||| ||||| ||||| || |||  ||||||||| || ||  | |||| |||||||||||||||| ||||||||||||||||||||    
T  21299833 tgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggt-agtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactca 21299928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 179 - 275
Target Start/End: Complemental strand, 41393340 - 41393245
Alignment:
Q  179 tgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtcttaaagagagcgacctggtcgtgactca 275  Q
    ||||||||||||||| ||||| ||||| || |||  ||||||||| || ||  | |||| |||||||||||||||| ||||||||||||||||||||    
T  41393340 tgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggt-agtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactca 41393245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 179 - 275
Target Start/End: Original strand, 51019373 - 51019468
Alignment:
Q  179 tgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtcttaaagagagcgacctggtcgtgactca 275  Q
    ||||||||||||||| ||||| ||||| || |||  ||||||||| || ||  | |||| |||||||||||||||| ||||||||||||||||||||    
T  51019373 tgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggt-agtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactca 51019468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 179 - 275
Target Start/End: Complemental strand, 54991581 - 54991486
Alignment:
Q  179 tgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtcttaaagagagcgacctggtcgtgactca 275  Q
    ||||||||||||||| ||||| ||||| || |||  ||||||||| || ||  | |||| |||||||||||||||| ||||||||||||||||||||    
T  54991581 tgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggt-agtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactca 54991486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 179 - 278
Target Start/End: Complemental strand, 24490127 - 24490028
Alignment:
Q  179 tgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtcttaaagagagcgacctggtcgtgactcaacc 278  Q
    |||||||||||||||| |||| ||||| || |||  |||||||||  |||   | || | |||||||||||||||||||||| |||||||||||||||||    
T  24490127 tgttttatcctggaggtggcgcggttgttagtctaccttgcacaaacttgattagtgtcgcgaaacgtcttaaagagagcgatctggtcgtgactcaacc 24490028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 166 - 276
Target Start/End: Complemental strand, 40408307 - 40408196
Alignment:
Q  166 ttgtagttgggcttgttttatcctggaggcggcgtggttg-ataatctgtcttgcacaattttgggcattgccacgaaacgtcttaaagagagcgacctg 264  Q
    |||||||||  |||||||||||||  | |||| ||| ||| ||||||| |||||||||| |||  ||| ||| || ||||||||||||||||| ||||||    
T  40408307 ttgtagttgaacttgttttatcctaaaagcggtgtgattggataatctatcttgcacaactttaagcagtgctacaaaacgtcttaaagagagtgacctg 40408208  T
Q  265 gtcgtgactcaa 276  Q
    ||||| ||||||    
T  40408207 gtcgtaactcaa 40408196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 179 - 275
Target Start/End: Complemental strand, 13695254 - 13695159
Alignment:
Q  179 tgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtcttaaagagagcgacctggtcgtgactca 275  Q
    ||||||||||||||| ||||| ||||| || |||  ||||||||| || ||  | |||| |||||| ||||||||| ||||||||||||||||||||    
T  13695254 tgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggt-agtgccgcgaaacatcttaaagaaagcgacctggtcgtgactca 13695159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 179 - 275
Target Start/End: Original strand, 21304953 - 21305048
Alignment:
Q  179 tgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtcttaaagagagcgacctggtcgtgactca 275  Q
    ||||||||||||||| ||||| ||||| || |||  ||||||||| || ||  | |||| ||||| |||||||||| ||||||||||||||||||||    
T  21304953 tgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggt-agtgccgcgaaaagtcttaaagaaagcgacctggtcgtgactca 21305048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 179 - 275
Target Start/End: Original strand, 47046307 - 47046402
Alignment:
Q  179 tgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtcttaaagagagcgacctggtcgtgactca 275  Q
    ||||||||||||||| ||||| ||||| || |||  ||||||||| || ||  | |||| |||||||||||||||| | ||||||||||||||||||    
T  47046307 tgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggt-agtgccgcgaaacgtcttaaagaaaacgacctggtcgtgactca 47046402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 299 - 342
Target Start/End: Complemental strand, 23093155 - 23093112
Alignment:
Q  299 aatagaatttggaaatccaaatacaactgtttggaaatccaaaa 342  Q
    ||||||||||||||||||||||||||| |||| |||||||||||    
T  23093155 aatagaatttggaaatccaaatacaacagttttgaaatccaaaa 23093112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 179 - 273
Target Start/End: Original strand, 8083027 - 8083121
Alignment:
Q  179 tgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtcttaaagagagcgacctggtcgtgact 273  Q
    ||||||||| ||||||||||| ||||| || |||  ||||||| |  ||||  | ||||  ||||||||||||||||||||||||| ||||||||    
T  8083027 tgttttatcttggaggcggcgcggttgttagtctaccttgcactaacttggatagtgccgtgaaacgtcttaaagagagcgacctgatcgtgact 8083121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 300 - 348
Target Start/End: Original strand, 8652129 - 8652178
Alignment:
Q  300 atagaatttggaaa-tccaaatacaactgtttggaaatccaaaaacaaca 348  Q
    |||||||||||||| || ||||||||| ||||||||||||||||||||||    
T  8652129 atagaatttggaaaatcaaaatacaacagtttggaaatccaaaaacaaca 8652178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 300 - 348
Target Start/End: Original strand, 8663936 - 8663985
Alignment:
Q  300 atagaatttggaaa-tccaaatacaactgtttggaaatccaaaaacaaca 348  Q
    |||||||||||||| || ||||||||| ||||||||||||||||||||||    
T  8663936 atagaatttggaaaatcaaaatacaacagtttggaaatccaaaaacaaca 8663985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 83 - 148
Target Start/End: Original strand, 17681452 - 17681517
Alignment:
Q  83 atcctttgacgaaaggaattactagaaagaaagtcataaacacatccaataggatgtgactaatgc 148  Q
    ||||||||||||||||| | || ||| ||||||||  ||| ||||||||||||||| |||||||||    
T  17681452 atcctttgacgaaaggactaacaagagagaaagtccaaaatacatccaataggatgagactaatgc 17681517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 179 - 275
Target Start/End: Complemental strand, 13710763 - 13710669
Alignment:
Q  179 tgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtcttaaagagagcgacctggtcgtgactca 275  Q
    ||||||||||||||| ||||| ||||| || |||  |||||||||  || || | |||| |||||||||||||||| ||||| ||||||||||||||    
T  13710763 tgttttatcctggagacggcgcggttgctagtctaccttgcacaa-cttaggtagtgccgcgaaacgtcttaaagaaagcga-ctggtcgtgactca 13710669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #81
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 149 - 192
Target Start/End: Original strand, 8649600 - 8649643
Alignment:
Q  149 agtagttaatcgaacagttgtagttgggcttgttttatcctgga 192  Q
    ||||||||| || |||||||||||| ||||||||||||||||||    
T  8649600 agtagttaaccgcacagttgtagttaggcttgttttatcctgga 8649643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #82
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 149 - 192
Target Start/End: Original strand, 8661407 - 8661450
Alignment:
Q  149 agtagttaatcgaacagttgtagttgggcttgttttatcctgga 192  Q
    ||||||||| || |||||||||||| ||||||||||||||||||    
T  8661407 agtagttaaccgcacagttgtagttaggcttgttttatcctgga 8661450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #83
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 239 - 278
Target Start/End: Original strand, 10318839 - 10318878
Alignment:
Q  239 cgaaacgtcttaaagagagcgacctggtcgtgactcaacc 278  Q
    ||||| ||||||||||||||||| ||||||||||||||||    
T  10318839 cgaaatgtcttaaagagagcgacatggtcgtgactcaacc 10318878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #84
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 215 - 269
Target Start/End: Original strand, 30564450 - 30564504
Alignment:
Q  215 cttgcacaattttgggcattgccacgaaacgtcttaaagagagcgacctggtcgt 269  Q
    ||||||||| |||||| | |||| |||||||||||| |||||||||||| |||||    
T  30564450 cttgcacaaatttgggtagtgccgcgaaacgtcttacagagagcgacctagtcgt 30564504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #85
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 165 - 292
Target Start/End: Original strand, 39217367 - 39217490
Alignment:
Q  165 gttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtcttaaagagagcgacctg 264  Q
    ||||||||||||||| |||||| || ||||  | |||||| ||| | | ||||| |||||||| | || || ||||||||||    |||||| ||||||     
T  39217367 gttgtagttgggctttttttatactagaggtagtgtggttaatagtttatcttgtacaattttagacagtgtcacgaaacgt----aagagaacgacctc 39217462  T
Q  265 gtcgtgactcaacctagtaacaacttcg 292  Q
    || ||||||||| | |||||||||||||    
T  39217463 gttgtgactcaatccagtaacaacttcg 39217490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #86
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 240 - 278
Target Start/End: Complemental strand, 39319666 - 39319628
Alignment:
Q  240 gaaacgtcttaaagagagcgacctggtcgtgactcaacc 278  Q
    ||||||||||||||| ||||||||| |||||||||||||    
T  39319666 gaaacgtcttaaagaaagcgacctgatcgtgactcaacc 39319628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #87
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 299 - 348
Target Start/End: Complemental strand, 12878202 - 12878153
Alignment:
Q  299 aatagaatttggaaatccaaatacaactgtttggaaatccaaaaacaaca 348  Q
    |||||||||||| || ||||||| |||  |||||||||||||||||||||    
T  12878202 aatagaatttgggaacccaaatataacaatttggaaatccaaaaacaaca 12878153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #88
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 83 - 148
Target Start/End: Complemental strand, 13687841 - 13687776
Alignment:
Q  83 atcctttgacgaaaggaattactagaaagaaagtcataaacacatccaataggatgtgactaatgc 148  Q
    ||||||||||||||||| | |  ||| ||||||||| ||| ||||||| ||||||| |||||||||    
T  13687841 atcctttgacgaaaggactaaacagagagaaagtcacaaatacatccagtaggatgggactaatgc 13687776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #89
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 245 - 278
Target Start/End: Complemental strand, 34560527 - 34560494
Alignment:
Q  245 gtcttaaagagagcgacctggtcgtgactcaacc 278  Q
    |||||||||| |||||||||||||||||||||||    
T  34560527 gtcttaaagaaagcgacctggtcgtgactcaacc 34560494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #90
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 239 - 296
Target Start/End: Complemental strand, 34644593 - 34644536
Alignment:
Q  239 cgaaacgtcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtgg 296  Q
    |||||||||||||||| |||||| || |||||||||||||  |||| | |||||||||    
T  34644593 cgaaacgtcttaaagaaagcgacatgatcgtgactcaacccggtaatatcttcggtgg 34644536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #91
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 246 - 278
Target Start/End: Original strand, 3998123 - 3998155
Alignment:
Q  246 tcttaaagagagcgacctggtcgtgactcaacc 278  Q
    ||||||||| |||||||||||||||||||||||    
T  3998123 tcttaaagaaagcgacctggtcgtgactcaacc 3998155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 161; Significance: 9e-86; HSPs: 71)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 161; E-Value: 9e-86
Query Start/End: Original strand, 151 - 351
Target Start/End: Complemental strand, 33416670 - 33416470
Alignment:
Q  151 tagttaatcgaacagttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtctta 250  Q
    ||||||| || |||||||||| ||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||    
T  33416670 tagttaaccgcacagttgtagctgggcttgttttatcttggaggcggcgtggttgatagtctgtcttgcacaattttgggcagtgccacgaaacgtctta 33416571  T
Q  251 aagagagcgacctggtcgtgactcaacctagtaacaacttcggtggataatagaatttggaaatccaaatacaactgtttggaaatccaaaaacaacaga 350  Q
    |||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||| ||||||||||||||||||||||||    
T  33416570 aagagaccgacctggtcgtgactcaacctagtaacaacttcggtagataatagaatttggaaattcaaatacaacagtttggaaatccaaaaacaacaga 33416471  T
Q  351 a 351  Q
    |    
T  33416470 a 33416470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 159; E-Value: 1e-84
Query Start/End: Original strand, 146 - 348
Target Start/End: Original strand, 31449833 - 31450035
Alignment:
Q  146 tgcagtagttaatcgaacagttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacg 245  Q
    |||||||||||| || ||||||| || ||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||    
T  31449833 tgcagtagttaaccgcacagttgcagctggacttgttttatcctggaggcggcgtggttgatagtctgtcttgcacaattttgggcagtgccacgaaacg 31449932  T
Q  246 tcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtggataatagaatttggaaatccaaatacaactgtttggaaatccaaaaaca 345  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||  ||||||||||||||||||    
T  31449933 tcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcgatagataatagaatttggaaatccaaatacaacactttggaaatccaaaaaca 31450032  T
Q  346 aca 348  Q
    |||    
T  31450033 aca 31450035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 151; E-Value: 8e-80
Query Start/End: Original strand, 146 - 348
Target Start/End: Complemental strand, 17026063 - 17025861
Alignment:
Q  146 tgcagtagttaatcgaacagttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacg 245  Q
    |||||||||||||||||||||||||| | | |||||||||||||||||||| |||| |||||| ||||||||||||||| ||||||| ||||||||||||    
T  17026063 tgcagtagttaatcgaacagttgtagctagacttgttttatcctggaggcgacgtgattgatagtctgtcttgcacaatgttgggcagtgccacgaaacg 17025964  T
Q  246 tcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtggataatagaatttggaaatccaaatacaactgtttggaaatccaaaaaca 345  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||  |||| ||||| |||||||    
T  17025963 tcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtagataatagaatttggaaatccaaatacaacaatttgaaaatctaaaaaca 17025864  T
Q  346 aca 348  Q
    |||    
T  17025863 aca 17025861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 151; E-Value: 8e-80
Query Start/End: Original strand, 146 - 348
Target Start/End: Complemental strand, 17556555 - 17556353
Alignment:
Q  146 tgcagtagttaatcgaacagttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacg 245  Q
    |||||||||||||||||||||||||| | | |||||||||||||||||||| |||| |||||| ||||||||||||||| ||||||| ||||||||||||    
T  17556555 tgcagtagttaatcgaacagttgtagctagacttgttttatcctggaggcgacgtgattgatagtctgtcttgcacaatgttgggcagtgccacgaaacg 17556456  T
Q  246 tcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtggataatagaatttggaaatccaaatacaactgtttggaaatccaaaaaca 345  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||  |||| ||||| |||||||    
T  17556455 tcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtagataatagaatttggaaatccaaatacaacaatttgaaaatctaaaaaca 17556356  T
Q  346 aca 348  Q
    |||    
T  17556355 aca 17556353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 151; E-Value: 8e-80
Query Start/End: Original strand, 146 - 348
Target Start/End: Original strand, 18876334 - 18876535
Alignment:
Q  146 tgcagtagttaatcgaacagttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacg 245  Q
    |||||||||||| || |||||||||| || | ||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||    
T  18876334 tgcagtagttaaccgcacagttgtagatgagtttgttttatcctggaggcggcgtggttgatagtctgtcttgcacaattttgggcagtgccacgaaacg 18876433  T
Q  246 tcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtggataatagaatttggaaatccaaatacaactgtttggaaatccaaaaaca 345  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||| | |||||||||||||||||||    
T  18876434 tcttaaa-agagcgacctggtcgtgactcaacctagtaacaacttcggtatataatagaatttggaaatccaaatacagcagtttggaaatccaaaaaca 18876532  T
Q  346 aca 348  Q
    |||    
T  18876533 aca 18876535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 151 - 351
Target Start/End: Original strand, 44925895 - 44926095
Alignment:
Q  151 tagttaatcgaacagttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtctta 250  Q
    ||||||| || | |||||||| ||  |||||||||||||||||||||||||||||||| |||| |||||||||||||||||| ||||||||||||| |||    
T  44925895 tagttaaccgcatagttgtagatgaccttgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttgggcagtgccacgaaacgtttta 44925994  T
Q  251 aagagagcgacctggtcgtgactcaacctagtaacaacttcggtggataatagaatttggaaatccaaatacaactgtttggaaatccaaaaacaacaga 350  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||| ||||||||||||| | ||||||||||| ||||||||||||    
T  44925995 aagagagcgacctggtcgtgactcaacctagtaacaacttcggtagataaaagaatttgaaaatccaaatacagcagtttggaaatcaaaaaacaacaga 44926094  T
Q  351 a 351  Q
    |    
T  44926095 a 44926095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 135; E-Value: 3e-70
Query Start/End: Original strand, 146 - 348
Target Start/End: Complemental strand, 34118594 - 34118392
Alignment:
Q  146 tgcagtagttaatcgaacagttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacg 245  Q
    ||||||||||||  | |||||||||| |||||||||||||||||  ||||| ||||||||||| |||| |||||||||||||||||| ||||| ||||||    
T  34118594 tgcagtagttaacagcacagttgtagctgggcttgttttatcctaaaggcgacgtggttgatagtctgccttgcacaattttgggcagtgccatgaaacg 34118495  T
Q  246 tcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtggataatagaatttggaaatccaaatacaactgtttggaaatccaaaaaca 345  Q
    |||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||| |||||||   |||||||||||||||||||    
T  34118494 tcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcagtagataatagaatttggaaatctaaatacattagtttggaaatccaaaaaca 34118395  T
Q  346 aca 348  Q
    |||    
T  34118394 aca 34118392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 135; E-Value: 3e-70
Query Start/End: Original strand, 146 - 348
Target Start/End: Original strand, 38182204 - 38182405
Alignment:
Q  146 tgcagtagttaatcgaacagttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacg 245  Q
    ||||||||||||  | |||||||||| || |||||||||||||||||||||||||||||||||||||| |||||||||| ||||| | ||||||||||||    
T  38182204 tgcagtagttaacagcacagttgtagctgtgcttgttttatcctggaggcggcgtggttgataatctgccttgcacaatcttgggaagtgccacgaaacg 38182303  T
Q  246 tcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtggataatagaatttggaaatccaaatacaactgtttggaaatccaaaaaca 345  Q
    | |||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||| |||||  ||| ||||||||    
T  38182304 ttttaaagagagcgacctggtcgtgactcaacct-gtaacaacttcggtagataatagaatttggaaatccaaatacaacagtttgacaattcaaaaaca 38182402  T
Q  346 aca 348  Q
    |||    
T  38182403 aca 38182405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 146 - 348
Target Start/End: Original strand, 1910936 - 1911138
Alignment:
Q  146 tgcagtagttaatcgaacagttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacg 245  Q
    |||||||||||| || ||||||||||||| ||||||||||| |||||||| |||||||||||| ||||  |||||||||||||   | ||||||||||||    
T  1910936 tgcagtagttaaccgcacagttgtagttgagcttgttttatactggaggcagcgtggttgatagtctgctttgcacaattttgactagtgccacgaaacg 1911035  T
Q  246 tcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtggataatagaatttggaaatccaaatacaactgtttggaaatccaaaaaca 345  Q
    ||||||||||||||||||| |||||||| |||||| ||||||||||| | |||||||||||||| ||||||||||||||| |||||||||||||||||||    
T  1911036 tcttaaagagagcgacctgatcgtgacttaacctaataacaacttcgatagataatagaatttgaaaatccaaatacaacagtttggaaatccaaaaaca 1911135  T
Q  346 aca 348  Q
    |||    
T  1911136 aca 1911138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 146 - 348
Target Start/End: Complemental strand, 1807601 - 1807398
Alignment:
Q  146 tgcagtagttaatcgaacagttgtagttgggcttgtttt-atcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaac 244  Q
    |||| ||||||| || |||||||||| ||| |||||||| ||||| |||||||||||||||||| |||| |||||||||||||||||| || ||||||||    
T  1807601 tgcactagttaaccgcacagttgtagctggacttgtttttatcctagaggcggcgtggttgatagtctgccttgcacaattttgggcagtgtcacgaaac 1807502  T
Q  245 gtcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtggataatagaatttggaaatccaaatacaactgtttggaaatccaaaaac 344  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||| | |||| ||||||||||  |||| ||||||||||||    
T  1807501 gtcttaaagagagcgacctagtcgtgactcaacctagtaacaacttcggtagataatagaattggaaaattcaaatacaacaatttgaaaatccaaaaac 1807402  T
Q  345 aaca 348  Q
    ||||    
T  1807401 aaca 1807398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 146 - 293
Target Start/End: Original strand, 40125852 - 40125999
Alignment:
Q  146 tgcagtagttaatcgaacagttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacg 245  Q
    |||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||| |||| |||||||||||||||||| ||||||||||||    
T  40125852 tgcagtagttaatcgaacagttgtagctgggcttgttttatcttggaggcggcgtggttgatagtctgccttgcacaattttgggcagtgccacgaaacg 40125951  T
Q  246 tcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcgg 293  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||    
T  40125952 tcttaaagagagcgatctggtcgtgactcaacctagtaacaacttcgg 40125999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 215 - 348
Target Start/End: Original strand, 40130722 - 40130855
Alignment:
Q  215 cttgcacaattttgggcattgccacgaaacgtcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtggataatagaatttggaaat 314  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  40130722 cttgcacaattttgggcagtgccacgaaacgtcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtagataatagaatttggaaat 40130821  T
Q  315 ccaaatacaactgtttggaaatccaaaaacaaca 348  Q
    ||||||||||| ||||||||||||||||||||||    
T  40130822 ccaaatacaacagtttggaaatccaaaaacaaca 40130855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 121; E-Value: 7e-62
Query Start/End: Original strand, 146 - 346
Target Start/End: Original strand, 28559621 - 28559821
Alignment:
Q  146 tgcagtagttaatcgaacagttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacg 245  Q
    |||| ||||||||||||||||| ||  ||||||| |||||||||| || |||||||||||||| | || ||||||||||||||| || ||||||||||||    
T  28559621 tgcaatagttaatcgaacagttctaactgggcttattttatcctgcagacggcgtggttgatagtttgccttgcacaattttggacagtgccacgaaacg 28559720  T
Q  246 tcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtggataatagaatttggaaatccaaatacaactgtttggaaatccaaaaaca 345  Q
    ||||| |||||||||| | |||||||||||||||||||||||||||||| ||||||| |||||  ||||||||||||||| |||||||||||||||||||    
T  28559721 tcttatagagagcgacattgtcgtgactcaacctagtaacaacttcggtagataatataatttataaatccaaatacaacagtttggaaatccaaaaaca 28559820  T
Q  346 a 346  Q
    |    
T  28559821 a 28559821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 201 - 343
Target Start/End: Original strand, 4238337 - 4238479
Alignment:
Q  201 ggttgataatctgtcttgcacaattttgggcattgccacgaaacgtcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtggataa 300  Q
    |||||||| |||| |||||||||||||||||| ||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  4238337 ggttgatagtctgccttgcacaattttgggcagtgccatgaaacgtgttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtagataa 4238436  T
Q  301 tagaatttggaaatccaaatacaactgtttggaaatccaaaaa 343  Q
    ||||||||||||||||||||||||| |||||||||||||||||    
T  4238437 tagaatttggaaatccaaatacaacagtttggaaatccaaaaa 4238479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 146 - 300
Target Start/End: Complemental strand, 19166762 - 19166608
Alignment:
Q  146 tgcagtagttaatcgaacagttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacg 245  Q
    ||||||||||||  | ||||||||||||| ||||||||||||||||||||||||||||||||| |||| | |||||||||||||||| ||||||||||||    
T  19166762 tgcagtagttaacagcacagttgtagttgagcttgttttatcctggaggcggcgtggttgatagtctgccgtgcacaattttgggcagtgccacgaaacg 19166663  T
Q  246 tcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtggataa 300  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||| |||||    
T  19166662 tcttaaagagagcgacatggtcgtgactcaacctagtaacaacttcggtagataa 19166608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 11 - 148
Target Start/End: Original strand, 4241290 - 4241427
Alignment:
Q  11 cacagaataattagagagctctaaaaggaacggttaaagtatatcgtgcacgtactgataaagaattattcaatcctttgacgaaaggaattactagaaa 110  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||    
T  4241290 cacagaatgattagagagctctaaaaggaacggttaaagtatatcgtgcacgtattgataaagaattagtcaatcctttgacgaaaggaattactagaaa 4241389  T
Q  111 gaaagtcataaacacatccaataggatgtgactaatgc 148  Q
    ||||||| ||||||||||||| |||||| |||||||||    
T  4241390 gaaagtcctaaacacatccaacaggatgggactaatgc 4241427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 111; E-Value: 6e-56
Query Start/End: Original strand, 201 - 343
Target Start/End: Original strand, 4243076 - 4243218
Alignment:
Q  201 ggttgataatctgtcttgcacaattttgggcattgccacgaaacgtcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtggataa 300  Q
    |||||||| |||| |||||||||||||||||| ||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||| | |||||    
T  4243076 ggttgatagtctgccttgcacaattttgggcagtgccatgaaacgtgttaaagagagcgacctggtcgtgactcaacctagtaacaacttcgatagataa 4243175  T
Q  301 tagaatttggaaatccaaatacaactgtttggaaatccaaaaa 343  Q
    ||||||||||||||||||||||||| |||||||||||||||||    
T  4243176 tagaatttggaaatccaaatacaacagtttggaaatccaaaaa 4243218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 106; E-Value: 6e-53
Query Start/End: Original strand, 11 - 148
Target Start/End: Complemental strand, 17022071 - 17021934
Alignment:
Q  11 cacagaataattagagagctctaaaaggaacggttaaagtatatcgtgcacgtactgataaagaattattcaatcctttgacgaaaggaattactagaaa 110  Q
    |||| ||| ||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||| ||||| |||||||    
T  17022071 cacaaaatgattagagagttctaaaaggaacggttaaagtatatcgtgcatgtactgataaagaattagtcaatcctttgacgaaaagaattgctagaaa 17021972  T
Q  111 gaaagtcataaacacatccaataggatgtgactaatgc 148  Q
    |||||||||||||||||||||||||||| |||||||||    
T  17021971 gaaagtcataaacacatccaataggatgagactaatgc 17021934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 146 - 292
Target Start/End: Original strand, 15875635 - 15875781
Alignment:
Q  146 tgcagtagttaatcgaacagttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacg 245  Q
    ||||||||||||||| ||| |||||| || ||||||||||||||||||||||||||||||||| |||| |||||||||||||||||| ||||||||||||    
T  15875635 tgcagtagttaatcgtacaattgtagctgagcttgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttgggcagtgccacgaaacg 15875734  T
Q  246 tcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcg 292  Q
    || ||||||||||||||||||||| ||||||  ||||||||||||||    
T  15875735 tcctaaagagagcgacctggtcgtaactcaatttagtaacaacttcg 15875781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 11 - 148
Target Start/End: Complemental strand, 17552508 - 17552371
Alignment:
Q  11 cacagaataattagagagctctaaaaggaacggttaaagtatatcgtgcacgtactgataaagaattattcaatcctttgacgaaaggaattactagaaa 110  Q
    |||| ||| ||||||||| |||||||||||||||||||||||||||| || ||||||||||||||||| |||||||||||||||||||||||||||||||    
T  17552508 cacaaaatgattagagagatctaaaaggaacggttaaagtatatcgtacaagtactgataaagaattagtcaatcctttgacgaaaggaattactagaaa 17552409  T
Q  111 gaaagtcataaacacatccaataggatgtgactaatgc 148  Q
    ||||||| ||||||||||||| |||||| |||||||||    
T  17552408 gaaagtcctaaacacatccaacaggatgggactaatgc 17552371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 146 - 294
Target Start/End: Original strand, 17953839 - 17953988
Alignment:
Q  146 tgcagtagttaatcgaacagtt-gtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaac 244  Q
    ||||||||||||||  |||||| |||| || |||||||||||| |||||||||||||||||||| ||||||||||||||||||||||| |||||||||||    
T  17953839 tgcagtagttaatcacacagtttgtaggtgagcttgttttatcttggaggcggcgtggttgatattctgtcttgcacaattttgggcagtgccacgaaac 17953938  T
Q  245 gtcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggt 294  Q
    |||||||||| |||||| ||||||| ||||||||||||||||||||||||    
T  17953939 gtcttaaagaaagcgacatggtcgttactcaacctagtaacaacttcggt 17953988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 146 - 302
Target Start/End: Complemental strand, 36683707 - 36683551
Alignment:
Q  146 tgcagtagttaatcgaacagttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacg 245  Q
    ||||||||||||||| |||| ||||| ||  ||||||||||||||||||| |||||||||||| |||| ||| |||||||||||||| ||||||||||||    
T  36683707 tgcagtagttaatcgcacagatgtagctgaccttgttttatcctggaggcagcgtggttgatagtctgccttacacaattttgggcagtgccacgaaacg 36683608  T
Q  246 tcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtggataata 302  Q
    |||||||||||||||||| ||| ||||||||||||||||||||| |||| |||||||    
T  36683607 tcttaaagagagcgacctagtcatgactcaacctagtaacaactccggtagataata 36683551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 151 - 299
Target Start/End: Complemental strand, 24090750 - 24090602
Alignment:
Q  151 tagttaatcgaacagttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtctta 250  Q
    ||||||| || |||||||||| |  |||||||||||| |||||||| |||| |||||| |||| ||||||||| |||||||| |||||||||||||||||    
T  24090750 tagttaaccgcacagttgtagataagcttgttttatcttggaggcgacgtgattgatattctgccttgcacaactttgggcagtgccacgaaacgtctta 24090651  T
Q  251 aagagagcgacctggtcgtgactcaacctagtaacaacttcggtggata 299  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||    
T  24090650 aagagagcgacctggtcgtgactcaacctagtaacaacttcggtagata 24090602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 146 - 348
Target Start/End: Complemental strand, 2965758 - 2965545
Alignment:
Q  146 tgcagtagttaatcgaacagttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacg 245  Q
    ||||||||||||  | | |||||||| ||| ||||||||||||| ||||||| |||||||||| | |||||||||||||||| |||| ||||||||||||    
T  2965758 tgcagtagttaactgcatagttgtagctggacttgttttatcctagaggcggtgtggttgatagtgtgtcttgcacaattttaggcagtgccacgaaacg 2965659  T
Q  246 tcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtggat------------aatagaatttggaaatccaaatacaactgtttgga 333  Q
    | ||||||||||||||||||||||||||| |||||||||||| || |||||||            |||||||||||||||| |||||||| | |||| ||    
T  2965658 ttttaaagagagcgacctggtcgtgactc-acctagtaacaaatttggtggatatttcttttcaaaatagaatttggaaattcaaatacagcagtttcga 2965560  T
Q  334 aatccaaaaacaaca 348  Q
    |||||||||||||||    
T  2965559 aatccaaaaacaaca 2965545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 33 - 148
Target Start/End: Complemental strand, 21960248 - 21960132
Alignment:
Q  33 aaaaggaacggttaaagtatatcgtgcacgtactgataaagaattattcaatcctttgacgaaaggaattactagaaagaaagtcat-aaacacatccaa 131  Q
    ||||||||||||||||||||||| || ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| | ||||||||| ||    
T  21960248 aaaaggaacggttaaagtatatcatgtacgtactgataaagaattagtcaatcctttgacgaaaggaattactagaaagaaagtcctaaaacacatcgaa 21960149  T
Q  132 taggatgtgactaatgc 148  Q
    ||||||| |||||||||    
T  21960148 taggatgagactaatgc 21960132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 144 - 299
Target Start/End: Original strand, 23548597 - 23548752
Alignment:
Q  144 aatgcagtagttaatcgaacagttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaa 243  Q
    |||||||||||||| ||  ||||||||| ||  ||||||||||||| |||||| ||||||||||| || | |||||||||||||   || ||||||||||    
T  23548597 aatgcagtagttaaccgcgcagttgtagctgaacttgttttatcctagaggcgacgtggttgatagtccgccttgcacaattttacacagtgccacgaaa 23548696  T
Q  244 cgtcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtggata 299  Q
    ||||||| ||||||||||| ||||||||||||||||||||||||||||||| ||||    
T  23548697 cgtcttatagagagcgaccaggtcgtgactcaacctagtaacaacttcggtagata 23548752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 173 - 348
Target Start/End: Original strand, 43302712 - 43302880
Alignment:
Q  173 tgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaa-ttttgggcattgccacgaaacgtcttaaagagagcgacctggtcgtga 271  Q
    |||||||||||||||||||||||||||||||||||| |||  ||||||||| |||||| || ||||||||||||||||||||||| ||||| |||||| |    
T  43302712 tgggcttgttttatcctggaggcggcgtggttgatagtctaccttgcacaatttttggacagtgccacgaaacgtcttaaagagaacgaccgggtcgtaa 43302811  T
Q  272 ctcaacctagtaacaacttcggtggataatagaatttggaaatccaaatacaactgtttggaaatccaaaaacaaca 348  Q
    |||| |||| ||||||||||        |||||| ||||||||||| ||||||| ||||| ||||||||||||||||    
T  43302812 ctcagcctaataacaacttc--------atagaacttggaaatccatatacaacagtttgaaaatccaaaaacaaca 43302880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 33 - 148
Target Start/End: Original strand, 8329608 - 8329724
Alignment:
Q  33 aaaaggaacggttaaagtatatcgtgcacgtactgat-aaagaattattcaatcctttgacgaaaggaattactagaaagaaagtcataaacacatccaa 131  Q
    ||||||||||||||||||||||| || |||||||||| ||||||||| | |||| ||||||||||||||||||||||||||||||| |||||||||||||    
T  8329608 aaaaggaacggttaaagtatatcatgtacgtactgatgaaagaattagtaaatcatttgacgaaaggaattactagaaagaaagtcctaaacacatccaa 8329707  T
Q  132 taggatgtgactaatgc 148  Q
    ||||||| |||||||||    
T  8329708 taggatgggactaatgc 8329724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 169 - 306
Target Start/End: Original strand, 2355449 - 2355586
Alignment:
Q  169 tagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtcttaaagagagcgacctggtcg 268  Q
    |||||||| |||||||||| | |||||||||||||||||| |||||||||||||||||||   | || |||||||||||||||| |||| ||  |||| |    
T  2355449 tagttgggtttgttttatctttgaggcggcgtggttgatagtctgtcttgcacaattttgaaaagtgtcacgaaacgtcttaaaaagagtgatatggtgg 2355548  T
Q  269 tgactcaacctagtaacaacttcggtggataatagaat 306  Q
    |||||||| ||||||||||||| ||| |||||||||||    
T  2355549 tgactcaatctagtaacaactttggtagataatagaat 2355586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 266 - 348
Target Start/End: Complemental strand, 19915155 - 19915073
Alignment:
Q  266 tcgtgactcaacctagtaacaacttcggtggataatagaatttggaaatccaaatacaactgtttggaaatccaaaaacaaca 348  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||| ||||| ||||||||||||||||    
T  19915155 tcgtgactcaacctagtaacaacttcggtagataatagaatttggaaatacaaatacaacagtttgtaaatccaaaaacaaca 19915073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 149 - 276
Target Start/End: Complemental strand, 7902688 - 7902561
Alignment:
Q  149 agtagttaatcgaacagttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtct 248  Q
    |||||||||||| ||| |||| | ||| ||||||||||||| ||| |||||||||||||||| ||||||  ||||||||||| | || |||||||| | |    
T  7902688 agtagttaatcgcacaattgttgatggacttgttttatcctagagacggcgtggttgataatatgtcttatacaattttgggtaatgtcacgaaacattt 7902589  T
Q  249 taaagagagcgacctggtcgtgactcaa 276  Q
    ||||||||||||| ||||||||||||||    
T  7902588 taaagagagcgacttggtcgtgactcaa 7902561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 146 - 285
Target Start/End: Original strand, 28564786 - 28564927
Alignment:
Q  146 tgcagtagttaatcgaacagttgtagttgggcttgttttat--cctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaa 243  Q
    |||| ||||||||||||||||| ||   |||||||||||||  |||| || |||||||||| ||| ||||||||| ||||||||| ||| || || ||||    
T  28564786 tgcaatagttaatcgaacagttctaaccgggcttgttttatatcctgcagacggcgtggttaatagtctgtcttgaacaattttgagcagtgtcatgaaa 28564885  T
Q  244 cgtcttaaagagagcgacctggtcgtgactcaacctagtaac 285  Q
     || ||| ||||||||||||| ||||||||||||||||||||    
T  28564886 tgttttatagagagcgacctgatcgtgactcaacctagtaac 28564927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 146 - 285
Target Start/End: Original strand, 28572409 - 28572550
Alignment:
Q  146 tgcagtagttaatcgaacagttgtagttgggcttgttttat--cctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaa 243  Q
    |||| ||||||||||||||||| ||   |||||||||||||  |||| || |||||||||| ||| ||||||||| ||||||||| ||| || || ||||    
T  28572409 tgcaatagttaatcgaacagttctaaccgggcttgttttatatcctgcagacggcgtggttaatagtctgtcttgaacaattttgagcagtgtcatgaaa 28572508  T
Q  244 cgtcttaaagagagcgacctggtcgtgactcaacctagtaac 285  Q
     || ||| ||||||||||||| ||||||||||||||||||||    
T  28572509 tgttttatagagagcgacctgatcgtgactcaacctagtaac 28572550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 11 - 148
Target Start/End: Complemental strand, 28861421 - 28861286
Alignment:
Q  11 cacagaataattagagagctctaaaaggaacggttaaagtatat--cgtgcacgtactgataaagaattattcaatcctttgacgaaaggaattactaga 108  Q
    |||| |||||||| ||||||||||| ||||||||||||||||||  ||||||||||||||| |||||||| |  ||||||||||||||||||| |||       
T  28861421 cacaaaataattacagagctctaaa-ggaacggttaaagtatatatcgtgcacgtactgatgaagaattacttgatcctttgacgaaaggaataact--- 28861326  T
Q  109 aagaaagtcataaacacatccaataggatgtgactaatgc 148  Q
    ||||||||  |||||||||| |||| | || |||||||||    
T  28861325 aagaaagtattaaacacatctaatatgttgggactaatgc 28861286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 179 - 276
Target Start/End: Original strand, 33616727 - 33616823
Alignment:
Q  179 tgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtcttaaagagagcgacctggtcgtgactcaa 276  Q
    ||||||||||||||| ||||||||||| || |||  ||||||||| || ||| | |||| ||||||||||||||||||||||||||||||||||||||    
T  33616727 tgttttatcctggagacggcgtggttgttagtctaccttgcacaactt-gggtagtgccgcgaaacgtcttaaagagagcgacctggtcgtgactcaa 33616823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 179 - 278
Target Start/End: Complemental strand, 19430109 - 19430011
Alignment:
Q  179 tgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtcttaaagagagcgacctggtcgtgactcaacc 278  Q
    ||||||||||| ||| ||||||||||| || |||  ||||||||| || ||| | |||| ||||||||||||||||||||||||||||||||||||||||    
T  19430109 tgttttatcctagagacggcgtggttgttagtctaccttgcacaactt-gggtagtgccgcgaaacgtcttaaagagagcgacctggtcgtgactcaacc 19430011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 179 - 278
Target Start/End: Complemental strand, 19435611 - 19435513
Alignment:
Q  179 tgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtcttaaagagagcgacctggtcgtgactcaacc 278  Q
    ||||||||||| ||| ||||||||||| || |||  ||||||||| || ||| | |||| ||||||||||||||||||||||||||||||||||||||||    
T  19435611 tgttttatcctagagacggcgtggttgttagtctaccttgcacaactt-gggtagtgccgcgaaacgtcttaaagagagcgacctggtcgtgactcaacc 19435513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 179 - 278
Target Start/End: Complemental strand, 19566258 - 19566160
Alignment:
Q  179 tgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtcttaaagagagcgacctggtcgtgactcaacc 278  Q
    ||||||||||| ||| ||||||||||| || |||  ||||||||| || ||| | |||| ||||||||||||||||||||||||||||||||||||||||    
T  19566258 tgttttatcctagagacggcgtggttgttagtctaccttgcacaactt-gggtagtgccgcgaaacgtcttaaagagagcgacctggtcgtgactcaacc 19566160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 179 - 278
Target Start/End: Complemental strand, 19571760 - 19571662
Alignment:
Q  179 tgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtcttaaagagagcgacctggtcgtgactcaacc 278  Q
    ||||||||||| ||| ||||||||||| || |||  ||||||||| || ||| | |||| ||||||||||||||||||||||||||||||||||||||||    
T  19571760 tgttttatcctagagacggcgtggttgttagtctaccttgcacaactt-gggtagtgccgcgaaacgtcttaaagagagcgacctggtcgtgactcaacc 19571662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 179 - 278
Target Start/End: Complemental strand, 31030623 - 31030525
Alignment:
Q  179 tgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtcttaaagagagcgacctggtcgtgactcaacc 278  Q
    ||||||||||||||| ||||||||||| || |||  |||||| ||||| ||| | || | ||||||||||||||||||||||||||||||||||||||||    
T  31030623 tgttttatcctggagacggcgtggttgttagtctaccttgcataattt-gggtagtgtcgcgaaacgtcttaaagagagcgacctggtcgtgactcaacc 31030525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 179 - 294
Target Start/End: Complemental strand, 29220359 - 29220246
Alignment:
Q  179 tgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtcttaaagagagcgacctggtcgtgactcaacc 278  Q
    ||||||||||| ||||| |||||||||||| |||  ||||||||||||||  || || ||| |||||||||||  |||| ||||  ||||||||||||||    
T  29220359 tgttttatccttgaggcagcgtggttgatagtctaccttgcacaattttgatcagtgacacaaaacgtcttaa--agagtgacccagtcgtgactcaacc 29220262  T
Q  279 tagtaacaacttcggt 294  Q
    || |||||||||||||    
T  29220261 tactaacaacttcggt 29220246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 179 - 275
Target Start/End: Complemental strand, 32015795 - 32015700
Alignment:
Q  179 tgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtcttaaagagagcgacctggtcgtgactca 275  Q
    ||||||||||||||| ||||| ||||| || |||  |||||||||||  ||  | ||||||||||||||||||||||||||||||||||||||||||    
T  32015795 tgttttatcctggagacggcgcggttgctagtctaccttgcacaattcaggt-agtgccacgaaacgtcttaaagagagcgacctggtcgtgactca 32015700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 143 - 277
Target Start/End: Complemental strand, 17793584 - 17793450
Alignment:
Q  143 taatgcagtagttaatcgaacagttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaa 242  Q
    |||||||| ||||||| | | |||||||||| | ||||||||||| |||||  | ||||||||||| | || |||| ||||||||| ||| || |  |||    
T  17793584 taatgcagaagttaatagcaaagttgtagttagacttgttttatcgtggagatgacgtggttgatagtttgacttgtacaattttgagcagtgtcgtgaa 17793485  T
Q  243 acgtcttaaagagagcgacctggtcgtgactcaac 277  Q
    |||||||||||||| |||| |||| ||||||||||    
T  17793484 acgtcttaaagagaacgacatggttgtgactcaac 17793450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 178 - 263
Target Start/End: Complemental strand, 2470070 - 2469986
Alignment:
Q  178 ttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtcttaaagagagcgacct 263  Q
    |||||||||||||| | || ||| ||||||| |||| |||||||||||||| ||| |||||| |||||||||||||||||||||||    
T  2470070 ttgttttatcctggggacgtcgtagttgatagtctg-cttgcacaattttgagcagtgccacaaaacgtcttaaagagagcgacct 2469986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 162 - 284
Target Start/End: Original strand, 4544235 - 4544356
Alignment:
Q  162 acagttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtcttaaagagagcgac 261  Q
    |||||||||| ||| || |||||||||| | | ||  |||||||||| |||  |||||||||||||| ||| ||||| ||||||||||||||||||||||    
T  4544235 acagttgtagctggact-gttttatcctagggacgtagtggttgatagtcta-cttgcacaattttgagcagtgccatgaaacgtcttaaagagagcgac 4544332  T
Q  262 ctggt-cgtgactcaacctagtaa 284  Q
    || || ||||||||| ||||||||    
T  4544333 ctagtccgtgactcagcctagtaa 4544356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 198 - 284
Target Start/End: Complemental strand, 19954348 - 19954262
Alignment:
Q  198 cgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtcttaaagagagcgacctggtc-gtgactcaacctagtaa 284  Q
    ||||||||||| |||| |||| ||||||||||||| |||||| |||||||||||||||||||| || ||| | |||||||||||||||    
T  19954348 cgtggttgatagtctg-cttgtacaattttgggcagtgccacaaaacgtcttaaagagagcgatctagtctgcgactcaacctagtaa 19954262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 146 - 232
Target Start/End: Complemental strand, 10933559 - 10933474
Alignment:
Q  146 tgcagtagttaatcgaacagttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggca 232  Q
    ||||||||||||||  ||||||||||||||  |||||||||| |||||||| |||||||||||  || ||| |||||||||||||||    
T  10933559 tgcagtagttaatcacacagttgtagttggt-ttgttttatcatggaggcgacgtggttgatagcctatctggcacaattttgggca 10933474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 179 - 284
Target Start/End: Complemental strand, 13584453 - 13584341
Alignment:
Q  179 tgttttatcctggaggcggcgtggttgataatctgtcttgcacaattt-------tgggcattgccacgaaacgtcttaaagagagcgacctggtcgtga 271  Q
    ||||||||||||||| ||||||||||| || |||  ||||||||| ||       |||| | |||| |||||||||||||||||||||||||||||||||    
T  13584453 tgttttatcctggagacggcgtggttgttagtctaccttgcacaacttgggaacttgggtagtgccgcgaaacgtcttaaagagagcgacctggtcgtga 13584354  T
Q  272 ctcaacctagtaa 284  Q
     ||||||| ||||    
T  13584353 ttcaacctggtaa 13584341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 179 - 284
Target Start/End: Complemental strand, 19949913 - 19949808
Alignment:
Q  179 tgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtcttaaagagagcgacctggt-cgtgactcaac 277  Q
    ||||||||||||  | || | ||||||||| |||| ||||| |||||||||||| ||||||||||| |||||||||||||||| | || ||||||||| |    
T  19949913 tgttttatcctgaggacgtcatggttgatagtctg-cttgctcaattttgggcagtgccacgaaacttcttaaagagagcgacgtagtccgtgactcagc 19949815  T
Q  278 ctagtaa 284  Q
    |||||||    
T  19949814 ctagtaa 19949808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 170 - 292
Target Start/End: Original strand, 24673316 - 24673438
Alignment:
Q  170 agttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtcttaaagagagcgacctggtcgt 269  Q
    ||||| |||||||||||  |||| | |  |||| ||||| ||| ||||||| |||||||  || || |||||||||| ||||| ||||||| ||| ||||    
T  24673316 agttgagcttgttttattttggaagtgttgtgggtgatagtctatcttgcataattttgaacagtgtcacgaaacgttttaaaaagagcgatctgatcgt 24673415  T
Q  270 gactcaacctagtaacaacttcg 292  Q
     ||||||||||||||||||||||    
T  24673416 aactcaacctagtaacaacttcg 24673438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 146 - 243
Target Start/End: Complemental strand, 12820467 - 12820370
Alignment:
Q  146 tgcagtagttaatcgaacagttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaa 243  Q
    ||||||||||| ||| |||||||||  ||  ||||||||||||||||||||| ||| |||||| | ||  |||||||||||| |||| ||||||||||    
T  12820467 tgcagtagttagtcgcacagttgtacctgaacttgttttatcctggaggcggtgtgattgatagtttgctttgcacaattttaggcagtgccacgaaa 12820370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 179 - 275
Target Start/End: Original strand, 17955789 - 17955884
Alignment:
Q  179 tgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtcttaaagagagcgacctggtcgtgactca 275  Q
    ||||||||||||||| ||||| ||||| || |||  |||||||||||| ||  | |||| |||||||||||||| | ||||||||||||||||||||    
T  17955789 tgttttatcctggagacggcgcggttgctagtctaccttgcacaatttaggt-agtgccgcgaaacgtcttaaaaaaagcgacctggtcgtgactca 17955884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 146 - 209
Target Start/End: Original strand, 15951523 - 15951585
Alignment:
Q  146 tgcagtagttaatcgaacagttgtagttgggcttgttttatcctggaggcggcgtggttgataa 209  Q
    ||||||||||||  | |||||||||| |||||||||||||| ||||||||||||||||||||||    
T  15951523 tgcagtagttaactgcacagttgtagctgggcttgttttat-ctggaggcggcgtggttgataa 15951585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 169 - 263
Target Start/End: Complemental strand, 20072200 - 20072109
Alignment:
Q  169 tagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtcttaaagagagcgacct 263  Q
    |||||||||| |||||||| ||||| || |||||||||||||||  ||||||||||||| || | || ||||||| |||||||||||||||||||    
T  20072200 tagttgggct-gttttatc-tggagacgtcgtggttgataatcta-cttgcacaattttaggaaatgtcacgaaatgtcttaaagagagcgacct 20072109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 214 - 295
Target Start/End: Complemental strand, 5884058 - 5883978
Alignment:
Q  214 tcttgcacaattttgggcattgccacgaaacgtcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtg 295  Q
    ||||| |||||||||| || | |||| |||||||||||| ||||| ||||||||||||||||||| ||||| ||||| ||||    
T  5884058 tcttgtacaattttggacactaccacaaaacgtcttaaa-agagctacctggtcgtgactcaacccagtaataactttggtg 5883978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 179 - 271
Target Start/End: Original strand, 21644081 - 21644172
Alignment:
Q  179 tgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtcttaaagagagcgacctggtcgtga 271  Q
    ||||||||||||||| ||||| ||||| || |||  ||||||||| || ||  | |||| |||||||||||||||| ||||||||||||||||    
T  21644081 tgttttatcctggagtcggcgcggttgctagtctaccttgcacaacttaggt-agtgccgcgaaacgtcttaaagaaagcgacctggtcgtga 21644172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 178 - 278
Target Start/End: Original strand, 42157871 - 42157970
Alignment:
Q  178 ttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtcttaaagagagcgacctggtcgtgactcaac 277  Q
    |||||||||||||||| |||| || |||||||||| | ||| ||||||||||  | |||| | ||| |||||||||| || ||| |||||||||||||||    
T  42157871 ttgttttatcctggagacggcatgattgataatctat-ttgtacaattttggatagtgccgcaaaatgtcttaaagatagtgacttggtcgtgactcaac 42157969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 179 - 275
Target Start/End: Original strand, 42514374 - 42514469
Alignment:
Q  179 tgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtcttaaagagagcgacctggtcgtgactca 275  Q
    ||||||||||||||| ||||| ||||| || |||  ||||||||| || ||  | |||| |||||||||||||||| |||||||||||| |||||||    
T  42514374 tgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggt-agtgccgcgaaacgtcttaaagaaagcgacctggtcatgactca 42514469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 146 - 202
Target Start/End: Original strand, 43302658 - 43302714
Alignment:
Q  146 tgcagtagttaatcgaacagttgtagttgggcttgttttatcctggaggcggcgtgg 202  Q
    |||||||||||| || |||| || || ||||||||||||||||||||||||||||||    
T  43302658 tgcagtagttaaccgcacaggtgcagctgggcttgttttatcctggaggcggcgtgg 43302714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 162 - 253
Target Start/End: Complemental strand, 34517351 - 34517263
Alignment:
Q  162 acagttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtcttaaag 253  Q
    ||||||||||||| | |||||||||| ||| |||| ||||||||||| |||  ||||||||||||||  || ||||||||||||||||||||    
T  34517351 acagttgtagttgag-ttgttttatcttgggggcgtcgtggttgatagtctc-cttgcacaattttga-cagtgccacgaaacgtcttaaag 34517263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 242 - 276
Target Start/End: Original strand, 15951584 - 15951618
Alignment:
Q  242 aacgtcttaaagagagcgacctggtcgtgactcaa 276  Q
    |||||||||||||||||||||||||||||||||||    
T  15951584 aacgtcttaaagagagcgacctggtcgtgactcaa 15951618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 181 - 275
Target Start/End: Complemental strand, 24884805 - 24884712
Alignment:
Q  181 ttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtcttaaagagagcgacctggtcgtgactca 275  Q
    ||||||||||||| ||||||||||| || |||  ||||||||| || ||  | |||| | |||||||||||||| ||| ||||||||||||||||    
T  24884805 ttttatcctggagacggcgtggttgctagtctaccttgcacaacttaggt-agtgccgcaaaacgtcttaaagaaagctacctggtcgtgactca 24884712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 145 - 246
Target Start/End: Complemental strand, 27415640 - 27415539
Alignment:
Q  145 atgcagtagttaatcgaacagttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaac 244  Q
    ||||| || ||||||| ||| ||||||||  ||||||||||| ||| ||||| |||||||||||||  ||||  |||||| || || | |||||||||||    
T  27415640 atgcaatatttaatcgcacaattgtagttatgcttgttttattctgaaggcgacgtggttgataattcgtctgccacaatcttaggtagtgccacgaaac 27415541  T
Q  245 gt 246  Q
    ||    
T  27415540 gt 27415539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 179 - 284
Target Start/End: Original strand, 43999230 - 43999334
Alignment:
Q  179 tgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtcttaaagagagcgacctggtcgtgactcaacc 278  Q
    ||||||||||||||| |||||  |||| || |||  |||||||||||| ||  | |||| |||||||| ||||||| | ||||||| |||||||||||||    
T  43999230 tgttttatcctggagacggcgcagttgctagtctaccttgcacaatttaggt-agtgccgcgaaacgttttaaagaaaacgacctgatcgtgactcaacc 43999328  T
Q  279 tagtaa 284  Q
     |||||    
T  43999329 cagtaa 43999334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 278 - 340
Target Start/End: Original strand, 28565268 - 28565330
Alignment:
Q  278 ctagtaacaacttcggtggataatagaatttggaaatccaaatacaactgtttggaaatccaa 340  Q
    ||||||||||||||| | ||||||| ||||| ||||| |||||| ||| ||||| ||||||||    
T  28565268 ctagtaacaacttcgatagataatataatttagaaattcaaataaaacagtttgaaaatccaa 28565330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #66
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 278 - 340
Target Start/End: Original strand, 28572891 - 28572953
Alignment:
Q  278 ctagtaacaacttcggtggataatagaatttggaaatccaaatacaactgtttggaaatccaa 340  Q
    ||||||||||||||| | ||||||| ||||| ||||| |||||| ||| ||||| ||||||||    
T  28572891 ctagtaacaacttcgatagataatataatttagaaattcaaataaaacagtttgaaaatccaa 28572953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #67
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 245 - 283
Target Start/End: Original strand, 34818764 - 34818802
Alignment:
Q  245 gtcttaaagagagcgacctggtcgtgactcaacctagta 283  Q
    |||||||||| ||||||||||||||||||||||| ||||    
T  34818764 gtcttaaagaaagcgacctggtcgtgactcaacccagta 34818802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #68
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 245 - 283
Target Start/End: Complemental strand, 37771741 - 37771703
Alignment:
Q  245 gtcttaaagagagcgacctggtcgtgactcaacctagta 283  Q
    |||||||||| ||||||||||||||||||||||| ||||    
T  37771741 gtcttaaagaaagcgacctggtcgtgactcaacccagta 37771703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #69
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 234 - 275
Target Start/End: Complemental strand, 32010579 - 32010538
Alignment:
Q  234 tgccacgaaacgtcttaaagagagcgacctggtcgtgactca 275  Q
    |||| ||||| |||||||| ||||||||||||||||||||||    
T  32010579 tgccgcgaaatgtcttaaaaagagcgacctggtcgtgactca 32010538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #70
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 312 - 348
Target Start/End: Original strand, 15951623 - 15951659
Alignment:
Q  312 aatccaaatacaactgtttggaaatccaaaaacaaca 348  Q
    |||||||||||||| |||||||||| |||||||||||    
T  15951623 aatccaaatacaacagtttggaaatacaaaaacaaca 15951659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #71
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 316 - 348
Target Start/End: Original strand, 40126000 - 40126032
Alignment:
Q  316 caaatacaactgtttggaaatccaaaaacaaca 348  Q
    |||||||||| ||||||||||||||||||||||    
T  40126000 caaatacaacagtttggaaatccaaaaacaaca 40126032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 158; Significance: 6e-84; HSPs: 59)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 158; E-Value: 6e-84
Query Start/End: Original strand, 146 - 343
Target Start/End: Complemental strand, 4930361 - 4930164
Alignment:
Q  146 tgcagtagttaatcgaacagttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacg 245  Q
    |||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||| | || ||| |||||||||||||| ||||||||||||    
T  4930361 tgcagtagttaaccgcacagttgtagttgggcttgttttatcctggaggcggcgtggttgatagtatgacttacacaattttgggcagtgccacgaaacg 4930262  T
Q  246 tcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtggataatagaatttggaaatccaaatacaactgtttggaaatccaaaaa 343  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||| ||||||    
T  4930261 tcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtagataatagaatttggaaatccaaatacaacagtttggaaattcaaaaa 4930164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 151; E-Value: 8e-80
Query Start/End: Original strand, 146 - 348
Target Start/End: Complemental strand, 8268421 - 8268219
Alignment:
Q  146 tgcagtagttaatcgaacagttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacg 245  Q
    |||||||||||||||||||||||||| ||| ||||||||||| |||||| ||||||||||||| |||||||||||||||||||| || |||||| |||||    
T  8268421 tgcagtagttaatcgaacagttgtagctggacttgttttatcatggaggtggcgtggttgatagtctgtcttgcacaattttggacagtgccacaaaacg 8268322  T
Q  246 tcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtggataatagaatttggaaatccaaatacaactgtttggaaatccaaaaaca 345  Q
    |||||||||||||||||||||||||||||||  |||||||||||||||| ||||||||||||||||||| |||||||||| |||||||||||||||||||    
T  8268321 tcttaaagagagcgacctggtcgtgactcaatatagtaacaacttcggtagataatagaatttggaaatgcaaatacaacagtttggaaatccaaaaaca 8268222  T
Q  346 aca 348  Q
    |||    
T  8268221 aca 8268219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 149; E-Value: 1e-78
Query Start/End: Original strand, 149 - 337
Target Start/End: Complemental strand, 26341324 - 26341136
Alignment:
Q  149 agtagttaatcgaacagttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtct 248  Q
    ||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||| |||| |||||||||||||||||| |||||||||| ||||    
T  26341324 agtagttaatcgaacagttgtagctggacttgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttgggcagtgccacgaaatgtct 26341225  T
Q  249 taaagagagcgacctggtcgtgactcaacctagtaacaacttcggtggataatagaatttggaaatccaaatacaactgtttggaaatc 337  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||| ||||| |||||    
T  26341224 taaagagagcgacctggtcgtgactcaacctagtaacaacttcggtagataatagattttggaaatccaaatacaacagtttgaaaatc 26341136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 148 - 348
Target Start/End: Complemental strand, 8076176 - 8075975
Alignment:
Q  148 cagtagttaatcgaacagttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtc 247  Q
    ||||||||||||| ||||||| || || |||||||||||||||||||| |||||||||||| |||||||||||||||||| |||| ||||||||||||||    
T  8076176 cagtagttaatcgcacagttgcagctgagcttgttttatcctggaggcagcgtggttgatagtctgtcttgcacaattttaggcagtgccacgaaacgtc 8076077  T
Q  248 ttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtggataatagaatttggaaatcc-aaatacaactgtttggaaatccaaaaacaa 346  Q
    ||||||||||||||||||||||||||||||| |||||||||||| || |||||||||||||||||| || ||||||||| ||||||||||||||||||||    
T  8076076 ttaaagagagcgacctggtcgtgactcaacccagtaacaacttcagtagataatagaatttggaaaaccaaaatacaacagtttggaaatccaaaaacaa 8075977  T
Q  347 ca 348  Q
    ||    
T  8075976 ca 8075975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 146 - 346
Target Start/End: Original strand, 13314203 - 13314403
Alignment:
Q  146 tgcagtagttaatcgaacagttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacg 245  Q
    ||||||||||||| |||||||||||| || ||||||||||||||||||||| ||||| ||||| |||  |||||||||||||||||| | ||||||||||    
T  13314203 tgcagtagttaattgaacagttgtagctgagcttgttttatcctggaggcgacgtggctgatagtctaccttgcacaattttgggcagtaccacgaaacg 13314302  T
Q  246 tcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtggataatagaatttggaaatccaaatacaactgtttggaaatccaaaaaca 345  Q
    ||||||||||||||| |||||||||||||||||||||||||||| |||| |||| ||||||||||||||||||||||||| ||||||||| |||||||||    
T  13314303 tcttaaagagagcgatctggtcgtgactcaacctagtaacaactacggtagatagtagaatttggaaatccaaatacaacagtttggaaacccaaaaaca 13314402  T
Q  346 a 346  Q
    |    
T  13314403 a 13314403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 133; E-Value: 5e-69
Query Start/End: Original strand, 177 - 348
Target Start/End: Original strand, 9650965 - 9651137
Alignment:
Q  177 cttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtcttaaagagagcgacctggtcgtgactcaa 276  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  9650965 cttgttttatcctggaggcggcgtggttgatagtctgtcttgcacaattttgggcagtgccacgaaacgtcttaaagagagcgacctggtcgtgactcaa 9651064  T
Q  277 cctagtaacaacttcggtggataatagaatttggaaatcc-aaatacaactgtttggaaatccaaaaacaaca 348  Q
    |||||||||||||||||| || || |||||||||||| || ||||||||| ||||| ||||||||||||||||    
T  9651065 cctagtaacaacttcggtagaaaacagaatttggaaaaccaaaatacaacagtttgaaaatccaaaaacaaca 9651137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 146 - 348
Target Start/End: Original strand, 44423104 - 44423307
Alignment:
Q  146 tgcagtagttaatcgaacagttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacg 245  Q
    |||||||||||| || |||||||||| ||| |||||||||||||||||||||||| ||||||| |||| |||| |||||||||| || ||||||||||||    
T  44423104 tgcagtagttaaccgcacagttgtagatggacttgttttatcctggaggcggcgtagttgatagtctgccttgaacaattttggtcagtgccacgaaacg 44423203  T
Q  246 tcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtggataatagaattt-ggaaatccaaatacaactgtttggaaatccaaaaac 344  Q
    ||||||||||||||| ||| ||||||||||||||||||||||||| ||| ||||||||||||| ||||||||||||||||| ||||| ||||||||||||    
T  44423204 tcttaaagagagcgatctgatcgtgactcaacctagtaacaactttggtagataatagaatttgggaaatccaaatacaacagtttgaaaatccaaaaac 44423303  T
Q  345 aaca 348  Q
    ||||    
T  44423304 aaca 44423307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 146 - 292
Target Start/End: Complemental strand, 4579636 - 4579490
Alignment:
Q  146 tgcagtagttaatcgaacagttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacg 245  Q
    ||||||||||||||| |||||||||| ||| |||||||||||||||||||||||||||||||| |||| |||||||||||||||||| ||||||||||||    
T  4579636 tgcagtagttaatcgcacagttgtagctggacttgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttgggcagtgccacgaaacg 4579537  T
Q  246 tcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcg 292  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  4579536 tcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcg 4579490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 146 - 325
Target Start/End: Original strand, 44510644 - 44510823
Alignment:
Q  146 tgcagtagttaatcgaacagttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacg 245  Q
    ||||| |||||| || ||||||| || || ||||||||||||||||||||||||||||||||| |||||||||||||||||||| || |||||| |||||    
T  44510644 tgcagaagttaaccgcacagttgcagctgagcttgttttatcctggaggcggcgtggttgatagtctgtcttgcacaattttggacagtgccacaaaacg 44510743  T
Q  246 tcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtggataatagaatttggaaatccaaatacaac 325  Q
    ||||||||||||| | ||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||| |||||    
T  44510744 tcttaaagagagcaatctggtcgtgactcaacctagtaacaacttcggtagataatagaatttggaaatacaaaaacaac 44510823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 16 - 148
Target Start/End: Complemental strand, 12803087 - 12802955
Alignment:
Q  16 aataattagagagctctaaaaggaacggttaaagtatatcgtgcacgtactgataaagaattattcaatcctttgacgaaaggaattactagaaagaaag 115  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||| |||||||||||||||||||||||    
T  12803087 aataattagagatctctaaaaggaacggttaaagtatatcgtgcacgtactgataaagaattagtcaatcatttgatgaaaggaattactagaaagaaag 12802988  T
Q  116 tcataaacacatccaataggatgtgactaatgc 148  Q
    |||||||||||||||||||||||||||||||||    
T  12802987 tcataaacacatccaataggatgtgactaatgc 12802955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 148 - 294
Target Start/End: Original strand, 23246902 - 23247048
Alignment:
Q  148 cagtagttaatcgaacagttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtc 247  Q
    ||||||||||||| |||||||||| || ||||||||||||||||||||||||||||||||| |||| |||||||||||||||||| ||||||||||| ||    
T  23246902 cagtagttaatcgcacagttgtaggtgagcttgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttgggcagtgccacgaaacatc 23247001  T
Q  248 ttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggt 294  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||    
T  23247002 ttaaagagagcgacctggtcgtgactcaatctagtaacaacttcggt 23247048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 104; E-Value: 9e-52
Query Start/End: Original strand, 146 - 277
Target Start/End: Complemental strand, 23866196 - 23866065
Alignment:
Q  146 tgcagtagttaatcgaacagttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacg 245  Q
    |||||||||||| || ||||||| || || ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||    
T  23866196 tgcagtagttaaccgcacagttgcagctgagcttgttttatcctggaggcggcgtggttgatagtctgtcttgcacaattttgggcagtgccacgaaacg 23866097  T
Q  246 tcttaaagagagcgacctggtcgtgactcaac 277  Q
    ||||||||||||||||||||||||||||||||    
T  23866096 tcttaaagagagcgacctggtcgtgactcaac 23866065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 99; E-Value: 9e-49
Query Start/End: Original strand, 146 - 351
Target Start/End: Complemental strand, 27238370 - 27238164
Alignment:
Q  146 tgcagtagttaatcgaacagttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacg 245  Q
    |||||||||||| |   ||||||||| ||| ||||||||||| || |||||||||| |||||| |||| ||| |||||||||| ||| |||||| |||||    
T  27238370 tgcagtagttaagcacgcagttgtagctggacttgttttatcttgcaggcggcgtgattgatagtctgccttacacaattttgagcagtgccacaaaacg 27238271  T
Q  246 tcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtggataatagaatttg-gaaatccaaatacaactgtttggaaatccaaaaac 344  Q
    ||||||||||||||||||||||||||||||||||||||||||||||  | ||||||||| ||||  ||||||||||||||  |||| ||||||||||| |    
T  27238270 tcttaaagagagcgacctggtcgtgactcaacctagtaacaacttccatagataatagagtttgaaaaatccaaatacaatagtttagaaatccaaaatc 27238171  T
Q  345 aacagaa 351  Q
    | |||||    
T  27238170 atcagaa 27238164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 99; E-Value: 9e-49
Query Start/End: Original strand, 196 - 345
Target Start/End: Original strand, 42627214 - 42627364
Alignment:
Q  196 ggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtcttaaagagagcgacctggtcgtgactcaacct-agtaacaacttcggt 294  Q
    ||||||||||||| ||||  |||||||||||||||   |||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||    
T  42627214 ggcgtggttgatagtctgctttgcacaattttgggttgtgccacgaaacgtcttaaagagagcgacctggtcgtgaatcaacctaagtaacaacttcggt 42627313  T
Q  295 ggataatagaatttggaaatccaaatacaactgtttggaaatccaaaaaca 345  Q
     ||||||||||||||||||| |||||||||| |||||||||| ||||||||    
T  42627314 agataatagaatttggaaattcaaatacaacagtttggaaattcaaaaaca 42627364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 146 - 348
Target Start/End: Original strand, 10388334 - 10388546
Alignment:
Q  146 tgcagtagttaatcgaacagttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacg 245  Q
    ||||||||||||||| ||||||||||||| | ||||||||||||||||||||||| ||||||  ||| || ||||||| || ||||| |||||| |||||    
T  10388334 tgcagtagttaatcgcacagttgtagttgagtttgttttatcctggaggcggcgttgttgatg-tctatcatgcacaactt-gggcaatgccacaaaacg 10388431  T
Q  246 tcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtggat------------aatagaatttggaaatccaaatacaactgtttgga 333  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||            ||||||||||||||||||||||||||| | ||| |    
T  10388432 tcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtagatattctttttcaaaatagaatttggaaatccaaatacaacagcttgaa 10388531  T
Q  334 aatccaaaaacaaca 348  Q
    |||| ||||||||||    
T  10388532 aatctaaaaacaaca 10388546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 146 - 292
Target Start/End: Original strand, 25543329 - 25543475
Alignment:
Q  146 tgcagtagttaatcgaacagttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacg 245  Q
    |||||||||||| || |||||||||| | | ||||||||||||||||||||  |||||||||| | | |||||||||||||| |||| | ||||||||||    
T  25543329 tgcagtagttaaccgcacagttgtagctagacttgttttatcctggaggcgatgtggttgatagtttatcttgcacaattttaggcagtaccacgaaacg 25543428  T
Q  246 tcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcg 292  Q
    |||||||||| |||||||| | |||||||||||||||||||||||||    
T  25543429 tcttaaagagtgcgacctgattgtgactcaacctagtaacaacttcg 25543475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 216 - 348
Target Start/End: Complemental strand, 30256912 - 30256780
Alignment:
Q  216 ttgcacaattttgggcattgccacgaaacgtcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtggataatagaatttggaaatc 315  Q
    ||||||||||||||||| |||||||||| |||||||| | ||||| |||||||||||||||||| |||| ||||||||| |||||||||||||| |||||    
T  30256912 ttgcacaattttgggcagtgccacgaaatgtcttaaaaacagcgatctggtcgtgactcaaccttgtaaaaacttcggtagataatagaatttgcaaatc 30256813  T
Q  316 caaatacaactgtttggaaatccaaaaacaaca 348  Q
    |||||||||  ||||  ||||||||||||||||    
T  30256812 caaatacaatagtttataaatccaaaaacaaca 30256780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 181 - 299
Target Start/End: Original strand, 3357634 - 3357752
Alignment:
Q  181 ttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtcttaaagagagcgacctggtcgtgactcaaccta 280  Q
    ||||||| ||||| |||||||||||||| |||| ||||||||| |||||||  | || ||||||||||||||||||||||||||||||||||||||||||    
T  3357634 ttttatcatggagacggcgtggttgatagtctgccttgcacaactttgggctgtaccgcgaaacgtcttaaagagagcgacctggtcgtgactcaaccta 3357733  T
Q  281 gtaacaacttcggtggata 299  Q
    |||||||||||||| ||||    
T  3357734 gtaacaacttcggtagata 3357752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 151 - 292
Target Start/End: Complemental strand, 12254202 - 12254061
Alignment:
Q  151 tagttaatcgaacagttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtctta 250  Q
    ||||||| || |||||||||| ||  |||||||||||||| |||||||||| |||||| |||| ||||||||| ||| |||| |||||| |||| |||||    
T  12254202 tagttaaccgcacagttgtagctgaacttgttttatcctgtaggcggcgtgattgatagtctgccttgcacaactttaggcagtgccacaaaacatctta 12254103  T
Q  251 aagagagcgacctggtcgtgactcaacctagtaacaacttcg 292  Q
    |||||||||||||||||| |||||||||| ||||||||||||    
T  12254102 aagagagcgacctggtcgcgactcaacctggtaacaacttcg 12254061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 146 - 348
Target Start/End: Complemental strand, 21671323 - 21671109
Alignment:
Q  146 tgcagtagttaatcgaacagttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacg 245  Q
    |||||||||||| || |||||||||| || ||||||||||| ||||| |||  || ||||||  |||| ||||||||| |||||||| |||||| ||||     
T  21671323 tgcagtagttaaccgcacagttgtaggtgagcttgttttattctggatgcgaagttgttgattgtctgccttgcacaactttgggcagtgccactaaact 21671224  T
Q  246 tcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtggat------------aatagaatttggaaatccaaatacaactgtttgga 333  Q
    |||||||||||| | ||| ||||||||||||||||||||||||||| |  |||            ||||||||||||||||||||||| || ||||||||    
T  21671223 tcttaaagagagggtcctagtcgtgactcaacctagtaacaacttcagcagatattctatttcaaaatagaatttggaaatccaaataaaattgtttgga 21671124  T
Q  334 aatccaaaaacaaca 348  Q
    |||||||||||||||    
T  21671123 aatccaaaaacaaca 21671109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 146 - 290
Target Start/End: Complemental strand, 9008291 - 9008147
Alignment:
Q  146 tgcagtagttaatcgaacagttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacg 245  Q
    ||||||||||||||  |||||||||||||| |||||||||||||||||||  | || ||||||  ||| |||||||||||||| | | || ||| |||||    
T  9008291 tgcagtagttaatcacacagttgtagttggacttgttttatcctggaggcttcatgattgatagcctgccttgcacaattttgagtagtgtcactaaacg 9008192  T
Q  246 tcttaaagagagcgacctggtcgtgactcaacctagtaacaactt 290  Q
    |||||||||||| ||| ||||||||||||||||||||||||||||    
T  9008191 tcttaaagagagggacatggtcgtgactcaacctagtaacaactt 9008147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 146 - 348
Target Start/End: Complemental strand, 3880123 - 3879922
Alignment:
Q  146 tgcagtagttaatcgaacagttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaa-ttttgggcattgccacgaaac 244  Q
    |||||||||||| |  | ||||||||| ||||||   |||||||||||||||||||||||||| |||  ||| ||||| |||||  || || ||| ||||    
T  3880123 tgcagtagttaaccacatagttgtagtggggctt---ttatcctggaggcggcgtggttgatagtcttccttacacaaattttgaacagtgtcacaaaac 3880027  T
Q  245 gtcttaaagagagcgacctggtcgtgactcaa-cctagtaacaacttcggtggataatagaatttggaaatccaaatacaactgtttggaaatccaaaaa 343  Q
    |||||||||| || |||||| ||||||||||| ||||||||||| ||||||||| ||||||||||||||||| |||||||||  |||  |||||||| ||    
T  3880026 gtcttaaagaaagtgacctgatcgtgactcaaacctagtaacaaattcggtggaaaatagaatttggaaatcaaaatacaacaatttaaaaatccaagaa 3879927  T
Q  344 caaca 348  Q
    |||||    
T  3879926 caaca 3879922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 164 - 294
Target Start/End: Complemental strand, 29151044 - 29150914
Alignment:
Q  164 agttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtcttaaagagagcgacct 263  Q
    |||||||| ||  ||| ||||||| |||||||| ||||||||||| | || |||||||||||||| ||| || |||||||||||||||| ||||||| ||    
T  29151044 agttgtagctgaacttattttatcttggaggcgacgtggttgatagtttgccttgcacaattttgagcagtgtcacgaaacgtcttaaaaagagcgatct 29150945  T
Q  264 ggtcgtgactcaacctagtaacaacttcggt 294  Q
    |||||||||||||||||||||||||||||||    
T  29150944 ggtcgtgactcaacctagtaacaacttcggt 29150914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 146 - 348
Target Start/End: Original strand, 26287112 - 26287339
Alignment:
Q  146 tgcagtagttaatcgaacagttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttg-------------cacaattttgggca 232  Q
    ||||||||||||  | |||||||||| |||  ||||||||||||||||||||||||||||||| ||||  |||             ||||||||||| ||    
T  26287112 tgcagtagttaactgcacagttgtagctggatttgttttatcctggaggcggcgtggttgatagtctgcgttgatagtctgccttacacaattttggaca 26287211  T
Q  233 ttgccacgaaacgtcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtgg------------ataatagaatttggaaatccaaat 320  Q
     |||||  |||| ||||||||| |||| | |||||||||||||||||||||||||||||||| |            | ||||||||||||||||||||||    
T  26287212 atgccaaaaaacatcttaaagaaagcggcatggtcgtgactcaacctagtaacaacttcggtagagattatttttcaaaatagaatttggaaatccaaat 26287311  T
Q  321 acaactgtttggaaatccaaaaacaaca 348  Q
    ||||| |||| |||||||||||||||||    
T  26287312 acaacagttttgaaatccaaaaacaaca 26287339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 177 - 291
Target Start/End: Complemental strand, 16372491 - 16372381
Alignment:
Q  177 cttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtcttaaagagagcgacctggtcgtgactcaa 276  Q
    ||||||||||| |||||||| |||   ||||| |||||||||||| || ||||  | ||||||||||| |||||||||||||||| ||||||||||||||    
T  16372491 cttgttttatcttggaggcgacgt---tgatagtctgtcttgcacgatcttggt-agtgccacgaaacatcttaaagagagcgacttggtcgtgactcaa 16372396  T
Q  277 cctagtaacaacttc 291  Q
    |||||||||||||||    
T  16372395 cctagtaacaacttc 16372381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 179 - 278
Target Start/End: Complemental strand, 24528449 - 24528351
Alignment:
Q  179 tgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtcttaaagagagcgacctggtcgtgactcaacc 278  Q
    ||||||||||||||| ||||||||||| || |||  ||||||||| || ||| | |||| | ||||||||||||||||||||||||||||||||||||||    
T  24528449 tgttttatcctggagacggcgtggttgttagtctaccttgcacaactt-gggtaatgccgcaaaacgtcttaaagagagcgacctggtcgtgactcaacc 24528351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 35 - 144
Target Start/End: Complemental strand, 2596553 - 2596444
Alignment:
Q  35 aaggaacggttaaagtatatcgtgcacgtactgataaagaattattcaatcctttgacgaaaggaattactagaaagaaagtcataaacacatccaatag 134  Q
    |||||||||||||||||||||  | ||  | | || |||||||| |||||||||||| |||||||||||  |||||||||||| |||| |||||||||||    
T  2596553 aaggaacggttaaagtatatcacgtactaattaatgaagaattagtcaatcctttgatgaaaggaattatcagaaagaaagtcttaaaaacatccaatag 2596454  T
Q  135 gatgtgacta 144  Q
    |||| |||||    
T  2596453 gatgggacta 2596444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 144 - 229
Target Start/End: Complemental strand, 12799540 - 12799455
Alignment:
Q  144 aatgcagtagttaatcgaacagttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgg 229  Q
    |||||||||||||| || |||||||||| ||| ||| |||||||||||| | ||||||||||||| |||| |||||||||||||||    
T  12799540 aatgcagtagttaaccgcacagttgtagctggacttattttatcctggatgtggcgtggttgatagtctgccttgcacaattttgg 12799455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 146 - 299
Target Start/End: Complemental strand, 15642362 - 15642209
Alignment:
Q  146 tgcagtagttaatcgaacagttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacg 245  Q
    |||||||||||| ||  | ||||||| || || |||||| ||||||||||| ||| ||||||| | |||||| |||||||||||  | || || ||||||    
T  15642362 tgcagtagttaaccgtgccgttgtagctgagcctgttttgtcctggaggcgacgtagttgatagtttgtcttccacaattttggatagtgtcatgaaacg 15642263  T
Q  246 tcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtggata 299  Q
    ||||||| ||||||||||| ||||||| |||    |||||||||||||| ||||    
T  15642262 tcttaaaaagagcgacctgatcgtgacacaattctgtaacaacttcggtagata 15642209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 144 - 250
Target Start/End: Original strand, 6590948 - 6591054
Alignment:
Q  144 aatgcagtagttaatcgaacagttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaa 243  Q
    |||| |||||||||||  |||||| ||  ||  |||||||||||||| ||||||||||||||||| |||| ||||||||||||| | || |||||| |||    
T  6590948 aatgtagtagttaatcacacagttataactgaacttgttttatcctgaaggcggcgtggttgatagtctgccttgcacaattttagacagtgccacaaaa 6591047  T
Q  244 cgtctta 250  Q
    |||||||    
T  6591048 cgtctta 6591054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 178 - 278
Target Start/End: Complemental strand, 9973558 - 9973459
Alignment:
Q  178 ttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtcttaaagagagcgacctggtcgtgactcaac 277  Q
    |||||||||||||||| ||||||||||| |  |||  ||||||||| || ||  | |||| |||||||||||||||| ||||||||||||||||||||||    
T  9973558 ttgttttatcctggagacggcgtggttgttcgtctaccttgcacaactt-ggatagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactcaac 9973460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 179 - 275
Target Start/End: Complemental strand, 33238097 - 33238002
Alignment:
Q  179 tgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtcttaaagagagcgacctggtcgtgactca 275  Q
    ||||||||||||||| ||||| ||||| || |||  |||||||||||  ||  | |||| |||||||||||||||||||||||||||||||||||||    
T  33238097 tgttttatcctggagacggcgcggttgctagtctaccttgcacaattcaggt-agtgccgcgaaacgtcttaaagagagcgacctggtcgtgactca 33238002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 179 - 275
Target Start/End: Complemental strand, 47999070 - 47998975
Alignment:
Q  179 tgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtcttaaagagagcgacctggtcgtgactca 275  Q
    ||||||||||||||| ||||| ||||| || |||  |||||||||||  ||  | |||| |||||||||||||||||||||||||||||||||||||    
T  47999070 tgttttatcctggagacggcgcggttgctagtctaccttgcacaattcaggt-agtgccgcgaaacgtcttaaagagagcgacctggtcgtgactca 47998975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 200 - 261
Target Start/End: Original strand, 29478176 - 29478236
Alignment:
Q  200 tggttgataatctgtcttgcacaattttgggcattgccacgaaacgtcttaaagagagcgac 261  Q
    ||||||||| ||||| ||||||||||||||||| |||||||||||||||| |||||||||||    
T  29478176 tggttgatagtctgt-ttgcacaattttgggcagtgccacgaaacgtcttgaagagagcgac 29478236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 179 - 275
Target Start/End: Original strand, 2234630 - 2234725
Alignment:
Q  179 tgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtcttaaagagagcgacctggtcgtgactca 275  Q
    ||||||||||||||| ||||| ||||| || |||  |||||||||||| ||  | |||| |||||||||||||||| ||| ||||||||||||||||    
T  2234630 tgttttatcctggagacggcgcggttgctagtctaccttgcacaatttaggt-agtgccgcgaaacgtcttaaagaaagcaacctggtcgtgactca 2234725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 179 - 275
Target Start/End: Original strand, 16539412 - 16539507
Alignment:
Q  179 tgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtcttaaagagagcgacctggtcgtgactca 275  Q
    ||||||||||||||| ||||| ||||| || |||  ||||||||| || ||  | |||| |||||||||||||||| ||||||||||||||||||||    
T  16539412 tgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggt-agtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactca 16539507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 179 - 275
Target Start/End: Complemental strand, 16626250 - 16626155
Alignment:
Q  179 tgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtcttaaagagagcgacctggtcgtgactca 275  Q
    ||||||||||||||| ||||| ||||| || |||  ||||||||| || ||  | |||| |||||||||||||||| ||||||||||||||||||||    
T  16626250 tgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggt-agtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactca 16626155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 179 - 275
Target Start/End: Original strand, 32212654 - 32212749
Alignment:
Q  179 tgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtcttaaagagagcgacctggtcgtgactca 275  Q
    ||||||||||||||| | ||| ||||| || |||  |||||||||||| ||  | |||| |||||||||||||||| ||||||||||||||||||||    
T  32212654 tgttttatcctggagacagcgcggttgctagtctaccttgcacaatttaggt-agtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactca 32212749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 179 - 275
Target Start/End: Complemental strand, 33243274 - 33243179
Alignment:
Q  179 tgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtcttaaagagagcgacctggtcgtgactca 275  Q
    ||||||||||||||| ||||| ||||| || |||  |||||||||||  ||  | |||| ||||||||||||||||||| |||||||||||||||||    
T  33243274 tgttttatcctggagacggcgcggttgctagtctaccttgcacaattcaggt-agtgccgcgaaacgtcttaaagagagtgacctggtcgtgactca 33243179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 179 - 275
Target Start/End: Complemental strand, 42572040 - 42571945
Alignment:
Q  179 tgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtcttaaagagagcgacctggtcgtgactca 275  Q
    ||||||||||||||| ||||| ||||| || |||  ||||||||| || ||  | |||| |||||||||||||||| ||||||||||||||||||||    
T  42572040 tgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggt-agtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactca 42571945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 179 - 275
Target Start/End: Complemental strand, 47993895 - 47993800
Alignment:
Q  179 tgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtcttaaagagagcgacctggtcgtgactca 275  Q
    ||||||||||||||| ||||| ||||| || |||  |||||||||||  ||  | |||| |||||||||||||||||||||||||||| ||||||||    
T  47993895 tgttttatcctggagacggcgcggttgctagtctaccttgcacaattcaggt-agtgccgcgaaacgtcttaaagagagcgacctggttgtgactca 47993800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 146 - 208
Target Start/End: Complemental strand, 30258228 - 30258166
Alignment:
Q  146 tgcagtagttaatcgaacagttgtagttgggcttgttttatcctggaggcggcgtggttgata 208  Q
    |||||||||||| || || ||||||| ||| ||||||||||||||||||||||||| ||||||    
T  30258228 tgcagtagttaaccgcactgttgtagctggacttgttttatcctggaggcggcgtgattgata 30258166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 179 - 273
Target Start/End: Complemental strand, 33226509 - 33226416
Alignment:
Q  179 tgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtcttaaagagagcgacctggtcgtgact 273  Q
    ||||||||||||| | ||||||||||| || |||  |||||| || || ||  | |||| |||||||||||||||||||||||||||||||||||    
T  33226509 tgttttatcctggtgacggcgtggttgttagtctaccttgcataacttaggt-agtgccgcgaaacgtcttaaagagagcgacctggtcgtgact 33226416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 33 - 148
Target Start/End: Original strand, 10391404 - 10391516
Alignment:
Q  33 aaaaggaacggttaaagtatatcgtgcacgtactgataaagaattattcaatcctttgacgaaaggaattactagaaagaaagtcataaacacatccaat 132  Q
    ||||||||| ||||||| | ||| || | |||||||| ||||| || |  ||||||||||||||||||| |||   ||||||||  ||||||||||||||    
T  10391404 aaaaggaacagttaaagaagatcatgtatgtactgatgaagaactaattgatcctttgacgaaaggaataact---aagaaagttctaaacacatccaat 10391500  T
Q  133 aggatgtgactaatgc 148  Q
    |||||| |||| ||||    
T  10391501 aggatgagactgatgc 10391516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 162 - 251
Target Start/End: Original strand, 13142884 - 13142973
Alignment:
Q  162 acagttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtcttaa 251  Q
    |||||||||| ||  ||||||||||||||| |||||||| ||||| | |||||| ||||||| ||||   | ||||||||||||||||||    
T  13142884 acagttgtagctgaacttgttttatcctggtggcggcgttgttgaaagtctgtcatgcacaactttgactagtgccacgaaacgtcttaa 13142973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 179 - 275
Target Start/End: Original strand, 21081039 - 21081136
Alignment:
Q  179 tgttttatcctggaggcggcgtggttgataatctgtcttgcaca-attttgggcattgccacgaaacgtcttaaagagagcgacctggtcgtgactca 275  Q
    ||||||||||||||| ||| | ||||| || |||  |||||||| | ||| || | |||| |||||||||||||||| ||||||||||||||||||||    
T  21081039 tgttttatcctggagacggtgcggttgctagtctaccttgcacacaatttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactca 21081136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 182 - 278
Target Start/End: Original strand, 28292506 - 28292600
Alignment:
Q  182 tttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtcttaaagagagcgacctggtcgtgactcaacc 278  Q
    |||||||||||| ||||||||||| || |||  |||||||||  ||||  | |||| |||||||||||||| |||||||||||||||||||| ||||    
T  28292506 tttatcctggagacggcgtggttgttagtctaccttgcacaa-cttggatagtgccgcgaaacgtcttaaa-agagcgacctggtcgtgacttaacc 28292600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 179 - 275
Target Start/End: Original strand, 47177119 - 47177214
Alignment:
Q  179 tgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtcttaaagagagcgacctggtcgtgactca 275  Q
    |||||||||||| || ||||| ||||| || |||  ||||||||| || ||  | |||| |||||||||||||||| ||||||||||||||||||||    
T  47177119 tgttttatcctgaagacggcgcggttgctagtctaccttgcacaacttaggt-agtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactca 47177214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 182 - 284
Target Start/End: Original strand, 6898359 - 6898461
Alignment:
Q  182 tttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtcttaaagagagcgacctggt-cgtgactcaaccta 280  Q
    |||||||||| | ||  |||||||||| |||| ||||||||||||||| || |||||| |||| ||||||||||||||| || || || |||||| ||||    
T  6898359 tttatcctggggacgttgtggttgatagtctg-cttgcacaattttggacagtgccacaaaacatcttaaagagagcgatctagtccgcgactcagccta 6898457  T
Q  281 gtaa 284  Q
    ||||    
T  6898458 gtaa 6898461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 181 - 261
Target Start/End: Complemental strand, 3284820 - 3284740
Alignment:
Q  181 ttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtcttaaagagagcgac 261  Q
    ||||||| || || ||| |||||||||| |||||||||||||| ||||  || |  |||||||| ||||||||||||||||    
T  3284820 ttttatcatgaagacggtgtggttgatagtctgtcttgcacaagtttgaacagtagcacgaaacatcttaaagagagcgac 3284740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 179 - 275
Target Start/End: Complemental strand, 12934492 - 12934397
Alignment:
Q  179 tgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtcttaaagagagcgacctggtcgtgactca 275  Q
    ||||||||||||||| ||||| ||||| || |||  ||||||||| |  ||  | |||| ||||| |||||||||| ||||||||||||||||||||    
T  12934492 tgttttatcctggagacggcgcggttgctagtctaccttgcacaactcaggt-agtgccgcgaaatgtcttaaagaaagcgacctggtcgtgactca 12934397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 179 - 275
Target Start/End: Complemental strand, 17495498 - 17495403
Alignment:
Q  179 tgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtcttaaagagagcgacctggtcgtgactca 275  Q
    ||||||||| ||||| ||||| ||||| || |||  ||||||||| || ||  | |||| |||||||||||||| | ||||||||||||||||||||    
T  17495498 tgttttatcttggagacggcgcggttgctagtctaccttgcacaacttaggt-agtgccgcgaaacgtcttaaaaaaagcgacctggtcgtgactca 17495403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 179 - 275
Target Start/End: Original strand, 17557716 - 17557811
Alignment:
Q  179 tgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtcttaaagagagcgacctggtcgtgactca 275  Q
    ||||||||| ||||| ||||| ||||| || |||  ||||||||| || ||  | |||| |||||||||||||| | ||||||||||||||||||||    
T  17557716 tgttttatcttggagacggcgcggttgctagtctaccttgcacaacttaggt-agtgccgcgaaacgtcttaaaaaaagcgacctggtcgtgactca 17557811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 179 - 275
Target Start/End: Complemental strand, 43892953 - 43892858
Alignment:
Q  179 tgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtcttaaagagagcgacctggtcgtgactca 275  Q
    ||||||||||||||| ||||| ||||| || | |  ||||||||| || ||  | ||||  ||||||||||||||| ||||||||||||||||||||    
T  43892953 tgttttatcctggagacggcgcggttgctagtttaccttgcacaacttaggt-agtgccgtgaaacgtcttaaagaaagcgacctggtcgtgactca 43892858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 180 - 263
Target Start/End: Original strand, 1289334 - 1289416
Alignment:
Q  180 gttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtcttaaagagagcgacct 263  Q
    |||||||| || |||||  |||||||||| |||| |||||| ||||||| | | || ||| |||||||||||||||||||||||    
T  1289334 gttttatcttgaaggcgttgtggttgatagtctg-cttgcataattttgagtagtgtcacaaaacgtcttaaagagagcgacct 1289416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 106 - 148
Target Start/End: Complemental strand, 15976846 - 15976804
Alignment:
Q  106 agaaagaaagtcataaacacatccaataggatgtgactaatgc 148  Q
    |||||||||||| |||||||||||||||| ||| |||||||||    
T  15976846 agaaagaaagtcttaaacacatccaatagaatgagactaatgc 15976804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 234 - 275
Target Start/End: Original strand, 22857741 - 22857782
Alignment:
Q  234 tgccacgaaacgtcttaaagagagcgacctggtcgtgactca 275  Q
    |||| |||||||||||||||| ||||||||| ||||||||||    
T  22857741 tgccgcgaaacgtcttaaagaaagcgacctgatcgtgactca 22857782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 245 - 278
Target Start/End: Complemental strand, 27256272 - 27256239
Alignment:
Q  245 gtcttaaagagagcgacctggtcgtgactcaacc 278  Q
    |||||||||| |||||||||||||||||||||||    
T  27256272 gtcttaaagaaagcgacctggtcgtgactcaacc 27256239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 240 - 296
Target Start/End: Original strand, 7875158 - 7875214
Alignment:
Q  240 gaaacgtcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtgg 296  Q
    ||||||||||||||| ||||||||| || | ||||||||| |||| | |||||||||    
T  7875158 gaaacgtcttaaagaaagcgacctgatcattactcaacctggtaatatcttcggtgg 7875214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 149; Significance: 1e-78; HSPs: 66)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 149; E-Value: 1e-78
Query Start/End: Original strand, 146 - 353
Target Start/End: Original strand, 2700073 - 2700281
Alignment:
Q  146 tgcagtagttaatcgaacagttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacg 245  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||  || ||||||||||||    
T  2700073 tgcagtagttaatcgaacagttgtagttgggcttgttttatcctggaagcggcgtggttgatagtctgtcttgcacaattttgaacagtgccacgaaacg 2700172  T
Q  246 tcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtggataatagaatttggaaatccaaatac-aactgtttggaaatccaaaaac 344  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||| |||| ||||||||| |||||||||||| ||| ||||| |||| |||||||    
T  2700173 tcttaaagagagcgatctggtcgtgactcaacctagtaacaacttcggtagatagtagaatttgaaaatccaaatactaacggtttgaaaattcaaaaac 2700272  T
Q  345 aacagaact 353  Q
    |||| ||||    
T  2700273 aacaaaact 2700281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 148; E-Value: 5e-78
Query Start/End: Original strand, 149 - 348
Target Start/End: Original strand, 6407830 - 6408029
Alignment:
Q  149 agtagttaatcgaacagttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtct 248  Q
    ||||||||| || |||||||||| || ||||||||||||||||||||||||||||||||| ||||  ||| ||||||||||||| |||||||||||||||    
T  6407830 agtagttaaccgcacagttgtagctgagcttgttttatcctggaggcggcgtggttgatagtctgctttgtacaattttgggcagtgccacgaaacgtct 6407929  T
Q  249 taaagagagcgacctggtcgtgactcaacctagtaacaacttcggtggataatagaatttggaaatccaaatacaactgtttggaaatccaaaaacaaca 348  Q
    | |||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  6407930 tcaagagagcgacctgatcgtgactcaacctagtaacaacttcggtagataatagaatttggaaatccaaatacaacagtttggaaatccaaaaacaaca 6408029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 138; E-Value: 5e-72
Query Start/End: Original strand, 149 - 346
Target Start/End: Complemental strand, 12689096 - 12688899
Alignment:
Q  149 agtagttaatcgaacagttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtct 248  Q
    ||||||||| || |||||||||| || |||||||||||||||||| |||||||||||||| |||| |||||||||||||||||| |  ||| ||||||||    
T  12689096 agtagttaaccgcacagttgtagctgagcttgttttatcctggagacggcgtggttgatagtctgccttgcacaattttgggcagtatcacaaaacgtct 12688997  T
Q  249 taaagagagcgacctggtcgtgactcaacctagtaacaacttcggtggataatagaatttggaaatccaaatacaactgtttggaaatccaaaaacaa 346  Q
    ||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||    
T  12688996 taaagagagtgacctggtcatgactcaacctagtaacaacttcggtggataatagaatttggaaatccaaatacaacagtttgaaaatccaaaaacaa 12688899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 149 - 336
Target Start/End: Original strand, 11570719 - 11570906
Alignment:
Q  149 agtagttaatcgaacagttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtct 248  Q
    ||||||| | || |||||||||| || ||||||||||||||||||||||||||||||||  |||| |||||||||||||||||| |||||||||||||||    
T  11570719 agtagttcaccgcacagttgtagctgagcttgttttatcctggaggcggcgtggttgattgtctgccttgcacaattttgggcagtgccacgaaacgtct 11570818  T
Q  249 taaagagagcgacctggtcgtgactcaacctagtaacaacttcggtggataatagaatttggaaatccaaatacaactgtttggaaat 336  Q
    |||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||| ||||| ||||    
T  11570819 taaagagagcgacctggttgtgactcaacctagtaacaacttcggtagataatagaatttcgaaatccaaatacaacagtttgaaaat 11570906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 131; E-Value: 7e-68
Query Start/End: Original strand, 146 - 348
Target Start/End: Complemental strand, 8747910 - 8747708
Alignment:
Q  146 tgcagtagttaatcgaacagttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacg 245  Q
    |||||||||||| |  | ||||| || || ||||||||||||||||||||||||| |||||||  |||||||||||||||||||||| || |||| ||||    
T  8747910 tgcagtagttaaccacatagttgcagctgagcttgttttatcctggaggcggcgttgttgatagcctgtcttgcacaattttgggcagtgtcacggaacg 8747811  T
Q  246 tcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtggataatagaatttggaaatccaaatacaactgtttggaaatccaaaaaca 345  Q
    ||||||||||||||||||||||||||||||||||||||||||||||  | |||||||||||||||||||||||||||||| ||||| |||||||||||||    
T  8747810 tcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcaatagataatagaatttggaaatccaaatacaacagtttgtaaatccaaaaaca 8747711  T
Q  346 aca 348  Q
    |||    
T  8747710 aca 8747708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 130; E-Value: 3e-67
Query Start/End: Original strand, 144 - 349
Target Start/End: Original strand, 33687568 - 33687773
Alignment:
Q  144 aatgcagtagttaatcgaacagttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaa 243  Q
    |||||||||||||| || ||||||||||||| | |||||||||||||||| |||| ||||||||| |||||||||||||||||||| || ||||||||||    
T  33687568 aatgcagtagttaaccgcacagttgtagttgagtttgttttatcctggagacggcatggttgatagtctgtcttgcacaattttggccagtgccacgaaa 33687667  T
Q  244 cgtcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtggataatagaatttggaaatccaaatacaactgtttggaaatccaaaaa 343  Q
    ||||||||||||||||||||||| || |||||||||| |||||| |||||| ||||| | |||||  ||||||||||||||| |||||||||||||||||    
T  33687668 cgtcttaaagagagcgacctggtggtaactcaacctaataacaatttcggtagataacaaaatttaaaaatccaaatacaacagtttggaaatccaaaaa 33687767  T
Q  344 caacag 349  Q
    ||||||    
T  33687768 caacag 33687773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 146 - 348
Target Start/End: Complemental strand, 21309159 - 21308960
Alignment:
Q  146 tgcagtagttaatcgaacagttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacg 245  Q
    |||||||||||| || |||||||||| || ||||||||||||||||||||||||||||||||| ||||  ||||||||||||||||| ||||| ||||||    
T  21309159 tgcagtagttaaccgcacagttgtagctgagcttgttttatcctggaggcggcgtggttgatagtctgcattgcacaattttgggcagtgccatgaaacg 21309060  T
Q  246 tcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtggataatagaatttggaaatccaaatacaactgtttggaaatccaaaaaca 345  Q
    |||||||||||||||  |||| ||||||||||||||||||||||||| | ||||||||||||||||||||||||||||   ||||| |||||||||||||    
T  21309059 tcttaaagagagcgatatggtagtgactcaacctagtaacaacttcgatagataatagaatttggaaatccaaataca---gtttgaaaatccaaaaaca 21308963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 11 - 148
Target Start/End: Original strand, 16834446 - 16834583
Alignment:
Q  11 cacagaataattagagagctctaaaaggaacggttaaagtatatcgtgcacgtactgataaagaattattcaatcctttgacgaaaggaattactagaaa 110  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||    
T  16834446 cacagaatgattagagagctctaaaaggaacggttaaagtatatcgtgcacgtactgataaagaattagtcaatcctttgacgaaaggaattgctagaaa 16834545  T
Q  111 gaaagtcataaacacatccaataggatgtgactaatgc 148  Q
    ||||||| |||||||||||||||||||| |||||||||    
T  16834546 gaaagtcctaaacacatccaataggatgggactaatgc 16834583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 202 - 349
Target Start/End: Complemental strand, 19674385 - 19674238
Alignment:
Q  202 gttgataatctgtcttgcacaattttgggcattgccacgaaacgtcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtggataat 301  Q
    ||||||| ||||||||||||||||||||||| ||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||  |||||    
T  19674385 gttgatagtctgtcttgcacaattttgggcagtgccatgaaacgtcttaaagagagtgacctggtcgtgactcaacctagtaacaacttcggtaaataat 19674286  T
Q  302 agaatttggaaatccaaatacaactgtttggaaatccaaaaacaacag 349  Q
    |||||||| ||||||||||||||| ||||| |||||||||||||||||    
T  19674285 agaatttgaaaatccaaatacaacagtttgaaaatccaaaaacaacag 19674238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 144 - 325
Target Start/End: Complemental strand, 14509114 - 14508933
Alignment:
Q  144 aatgcagtagttaatcgaacagttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaa 243  Q
    |||||||||||||||||||||||||||| || |||||||||||| |||| |||||||||||||||||||||||||||||||||||  || || |||||||    
T  14509114 aatgcagtagttaatcgaacagttgtagatgagcttgttttatcttggaagcggcgtggttgataatctgtcttgcacaattttgaacagtgacacgaaa 14509015  T
Q  244 cgtcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtggataatagaatttggaaatccaaatacaac 325  Q
    |||||| ||||||||||| || || | | ||| |||| ||||||||| ||| |||||||||||||| ||||| ||| |||||    
T  14509014 cgtcttgaagagagcgacatgatcataaatcatcctaataacaactttggtagataatagaatttgaaaatctaaagacaac 14508933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 144 - 292
Target Start/End: Original strand, 24589129 - 24589277
Alignment:
Q  144 aatgcagtagttaatcgaacagttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaa 243  Q
    |||||||||||||| || |||||||||||||| ||||||||||||||||| |||||||||||||| ||| ||||||||||||||||  | || |||||||    
T  24589129 aatgcagtagttaaccgcacagttgtagttggacttgttttatcctggagacggcgtggttgatagtctatcttgcacaattttggaaagtgtcacgaaa 24589228  T
Q  244 cgtcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcg 292  Q
    ||| ||||||||||||| ||| |||||||||||| ||||||||||||||    
T  24589229 cgttttaaagagagcgatctgatcgtgactcaacttagtaacaacttcg 24589277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 237 - 349
Target Start/End: Original strand, 11534736 - 11534848
Alignment:
Q  237 cacgaaacgtcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtggataatagaatttggaaatccaaatacaactgtttggaaat 336  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||| || ||||||||||||| |||||||||||||||| ||||| ||||    
T  11534736 cacgaaacgtcttaaagagagcgacctggtcttgactcaacctagtaacaacttcagtagataatagaatttcgaaatccaaatacaacagtttgaaaat 11534835  T
Q  337 ccaaaaacaacag 349  Q
    |||||||||||||    
T  11534836 ccaaaaacaacag 11534848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 237 - 349
Target Start/End: Original strand, 11560246 - 11560358
Alignment:
Q  237 cacgaaacgtcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtggataatagaatttggaaatccaaatacaactgtttggaaat 336  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||| || ||||||||||||| |||||||||||||||| ||||| ||||    
T  11560246 cacgaaacgtcttaaagagagcgacctggtcttgactcaacctagtaacaacttcagtagataatagaatttcgaaatccaaatacaacagtttgaaaat 11560345  T
Q  337 ccaaaaacaacag 349  Q
    |||||||||||||    
T  11560346 ccaaaaacaacag 11560358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 144 - 292
Target Start/End: Original strand, 29892226 - 29892374
Alignment:
Q  144 aatgcagtagttaatcgaacagttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaa 243  Q
    |||||| ||||||| |  |||||||||| ||| |||||||||||||||||| || |||||||||| | ||||||||||||||||||||| |||||| |||    
T  29892226 aatgcaatagttaaccacacagttgtagctggacttgttttatcctggaggaggtgtggttgatagtttgtcttgcacaattttgggcagtgccaccaaa 29892325  T
Q  244 cgtcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcg 292  Q
    | |||||||||||||||||||  ||||||||||||||||||||||||||    
T  29892326 cttcttaaagagagcgacctgaccgtgactcaacctagtaacaacttcg 29892374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 210 - 342
Target Start/End: Complemental strand, 11428108 - 11427975
Alignment:
Q  210 tctgtcttgcacaa-ttttgggcattgccacgaaacgtcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtggataatagaattt 308  Q
    |||| ||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||  |||||| |||||    
T  11428108 tctgccttgcacaacttttgggcagtgccacgaaacgtcttaaagagagcgacctggtcgtgactcaatctaataacaacttcggtaaataataaaattt 11428009  T
Q  309 ggaaatccaaatacaactgtttggaaatccaaaa 342  Q
    | ||||||||||||||  ||||||||||||||||    
T  11428008 gaaaatccaaatacaatagtttggaaatccaaaa 11427975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 146 - 294
Target Start/End: Original strand, 12406320 - 12406468
Alignment:
Q  146 tgcagtagttaatcgaacagttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacg 245  Q
    |||||||||||| |  ||||||||||||| || ||||||||| || |||||||||| |||||| |||  ||||||||| ||| |||| ||||||||||||    
T  12406320 tgcagtagttaaccacacagttgtagttgagcatgttttatcatgaaggcggcgtgattgatagtcttccttgcacaactttaggcactgccacgaaacg 12406419  T
Q  246 tcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggt 294  Q
    |||| |||||||||||||||||||||||||| |||||||||||||||||    
T  12406420 tctttaagagagcgacctggtcgtgactcaatctagtaacaacttcggt 12406468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 146 - 290
Target Start/End: Original strand, 20748251 - 20748395
Alignment:
Q  146 tgcagtagttaatcgaacagttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacg 245  Q
    |||||||||||| || |||||||||| ||| |||||||||| ||||||||||||||||||||| || | ||||||||||||||| || | ||| |||||     
T  20748251 tgcagtagttaaccgcacagttgtagatggacttgttttattctggaggcggcgtggttgatagtcggccttgcacaattttggacagtaccatgaaaca 20748350  T
Q  246 tcttaaagagagcgacctggtcgtgactcaacctagtaacaactt 290  Q
    | |||||||| ||||||||||||||||||||||||||||||||||    
T  20748351 tgttaaagagggcgacctggtcgtgactcaacctagtaacaactt 20748395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 151 - 348
Target Start/End: Original strand, 25316535 - 25316739
Alignment:
Q  151 tagttaatcgaacagttgtagttgggcttgttttatcctggag---gcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtc 247  Q
    ||||||| || || ||||||| ||  |||||||||||||||||   ||||||||||| ||| | ||  ||||||||||||||||| |||||| |||||||    
T  25316535 tagttaaccgcacggttgtagatgaacttgttttatcctggagacggcggcgtggttcatagtttgctttgcacaattttgggcagtgccacaaaacgtc 25316634  T
Q  248 ttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtggataata----gaatttggaaatccaaatacaactgtttggaaatccaaaaa 343  Q
    |||||  |||||||||||||| ||||||| |||||||||| |||||| |||||||    ||||||||||||||||||| ||  |||||||||| ||||||    
T  25316635 ttaaattgagcgacctggtcgcgactcaatctagtaacaatttcggtagataatagaatgaatttggaaatccaaatataatagtttggaaattcaaaaa 25316734  T
Q  344 caaca 348  Q
    |||||    
T  25316735 caaca 25316739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 151 - 348
Target Start/End: Original strand, 26204029 - 26204233
Alignment:
Q  151 tagttaatcgaacagttgtagttgggcttgttttatcctggag---gcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtc 247  Q
    ||||||| || || ||||||| ||  |||||||||||||||||   ||||||||||| ||| | ||  ||||||||||||||||| |||||| |||||||    
T  26204029 tagttaaccgcacggttgtagatgaacttgttttatcctggagacggcggcgtggttcatagtttgctttgcacaattttgggcagtgccacaaaacgtc 26204128  T
Q  248 ttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtggataata----gaatttggaaatccaaatacaactgtttggaaatccaaaaa 343  Q
    |||||  |||||||||||||| ||||||| |||||||||| |||||| |||||||    ||||||||||||||||||| ||  |||||||||| ||||||    
T  26204129 ttaaattgagcgacctggtcgcgactcaatctagtaacaatttcggtagataatagaatgaatttggaaatccaaatataatagtttggaaattcaaaaa 26204228  T
Q  344 caaca 348  Q
    |||||    
T  26204229 caaca 26204233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 146 - 294
Target Start/End: Original strand, 13736645 - 13736793
Alignment:
Q  146 tgcagtagttaatcgaacagttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacg 245  Q
    ||||||||||| ||| ||| |||||| || |||||||||||||||||||| | ||||||| || |||  ||||||||||||| |||| ||||||||||||    
T  13736645 tgcagtagttattcgcacatttgtagatgtgcttgttttatcctggaggcagtgtggttggtagtcttccttgcacaattttaggcagtgccacgaaacg 13736744  T
Q  246 tcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggt 294  Q
    || ||||||||| |||||||| | |||||||||||||||||||||||||    
T  13736745 tcgtaaagagagggacctggtggcgactcaacctagtaacaacttcggt 13736793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 146 - 292
Target Start/End: Original strand, 11614059 - 11614205
Alignment:
Q  146 tgcagtagttaatcgaacagttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacg 245  Q
    |||| ||||||| || ||| ||||| ||| ||||||||||||||||||||||||||||||||| |||| |||||||||||||| ||| |||||  |||||    
T  11614059 tgcattagttaaccgcacaattgtaattgtgcttgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttgagcagtgccataaaacg 11614158  T
Q  246 tcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcg 292  Q
    | ||||||||| | ||||  |||||||||||||||||||||||||||    
T  11614159 ttttaaagagaacaacctcatcgtgactcaacctagtaacaacttcg 11614205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 162 - 254
Target Start/End: Original strand, 16836139 - 16836231
Alignment:
Q  162 acagttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtcttaaaga 254  Q
    |||||||||| |||||||||||||||||||||||||||||||||||| |||| |||| ||||||||||||| |||||||||||||||||||||    
T  16836139 acagttgtagctgggcttgttttatcctggaggcggcgtggttgatagtctgccttgtacaattttgggcagtgccacgaaacgtcttaaaga 16836231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 146 - 254
Target Start/End: Original strand, 17964526 - 17964634
Alignment:
Q  146 tgcagtagttaatcgaacagttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacg 245  Q
    |||||||||||| || ||||||| || |||||||||||||||||||||||||||||||||||| |||| |||||||||||||||  | ||||||||||||    
T  17964526 tgcagtagttaaccgcacagttgcagctgggcttgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttggatagtgccacgaaacg 17964625  T
Q  246 tcttaaaga 254  Q
    |||||||||    
T  17964626 tcttaaaga 17964634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 15 - 147
Target Start/End: Original strand, 12797060 - 12797191
Alignment:
Q  15 gaataattagagagctctaaaaggaacggttaaagtatatcgtgcacgtactgataaagaattattcaatcctttgacgaaaggaattactagaaagaaa 114  Q
    ||||||||||||||||||||| ||||||||||||||| ||||| || ||||| ||||||| ||| |  ||||||||| ||||||||| ||||| ||||||    
T  12797060 gaataattagagagctctaaa-ggaacggttaaagtaaatcgtacatgtactcataaagacttagttgatcctttgatgaaaggaataactagtaagaaa 12797158  T
Q  115 gtcataaacacatccaataggatgtgactaatg 147  Q
    ||| |||||||||||||  ||||| ||||||||    
T  12797159 gtcctaaacacatccaacgggatgagactaatg 12797191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 144 - 288
Target Start/End: Original strand, 22695236 - 22695380
Alignment:
Q  144 aatgcagtagttaatcgaacagttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaa 243  Q
    |||||||| ||||| || |||||||||| ||  ||||||||||| ||||||||| ||| |||||  | ||||||||||||||||| ||| || |||||||    
T  22695236 aatgcagtggttaaccgcacagttgtagctgtacttgttttatcgtggaggcggtgtgattgattgtatgtcttgcacaattttgagcaatgtcacgaaa 22695335  T
Q  244 cgtcttaaagagagcgacctggtcgtgactcaacctagtaacaac 288  Q
    ||| ||||||||||| || |  ||||| |||||||||||||||||    
T  22695336 cgtgttaaagagagcaacataatcgtgtctcaacctagtaacaac 22695380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 283 - 345
Target Start/End: Original strand, 17964634 - 17964696
Alignment:
Q  283 aacaacttcggtggataatagaatttggaaatccaaatacaactgtttggaaatccaaaaaca 345  Q
    |||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||    
T  17964634 aacaacttcggtagataatagaatttggaaatccaaatacaacagtttggaaatccaaaaaca 17964696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 179 - 278
Target Start/End: Complemental strand, 19478243 - 19478145
Alignment:
Q  179 tgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtcttaaagagagcgacctggtcgtgactcaacc 278  Q
    ||||||||| ||||| ||||||||||| || |||  ||||||||| || ||| | |||| ||||||||||||||||||||||||||||||||||||||||    
T  19478243 tgttttatcgtggagacggcgtggttgttagtctaccttgcacaactt-gggtagtgccgcgaaacgtcttaaagagagcgacctggtcgtgactcaacc 19478145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 181 - 278
Target Start/End: Complemental strand, 3902006 - 3901909
Alignment:
Q  181 ttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtcttaaagagagcgacctggtcgtgactcaacc 278  Q
    ||||||||||||||||||| ||||| || |||  |||||||||  ||||  | |||| | ||||||||||||||||||||||||||||||||||||||    
T  3902006 ttttatcctggaggcggcgcggttggtattctaccttgcacaaacttggatagtgccgcaaaacgtcttaaagagagcgacctggtcgtgactcaacc 3901909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 146 - 292
Target Start/End: Complemental strand, 22609696 - 22609556
Alignment:
Q  146 tgcagtagttaatcgaacagttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaa-ttttgggcattgccacgaaac 244  Q
    |||||| |||||||   |||||||||||| ||||||||||||||||||||||||||  ||||| | | |||| ||||| |||| |||| | |||||||||    
T  22609696 tgcagttgttaatcacgcagttgtagttgagcttgttttatcctggaggcggcgtgactgatagtttatcttccacaatttttaggcagtaccacgaaac 22609597  T
Q  245 gtcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcg 292  Q
    ||||||||||       |||||||||||| |||||| |||||||||||    
T  22609596 gtcttaaaga-------ctggtcgtgacttaacctaataacaacttcg 22609556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 179 - 279
Target Start/End: Original strand, 12183000 - 12183100
Alignment:
Q  179 tgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtcttaaagagagcgacctggtcgtgactcaacc 278  Q
    |||||||| ||||||||| || ||||| || |||   ||||||||  ||||| | |||| ||||||||||||||||||||||||||||||||||||||||    
T  12183000 tgttttattctggaggcgacgcggttgttagtctacattgcacaaacttgggtagtgccgcgaaacgtcttaaagagagcgacctggtcgtgactcaacc 12183099  T
Q  279 t 279  Q
    |    
T  12183100 t 12183100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 179 - 278
Target Start/End: Original strand, 13605092 - 13605190
Alignment:
Q  179 tgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtcttaaagagagcgacctggtcgtgactcaacc 278  Q
    ||||||||||||||| ||||||||||| || |||  ||||||||| || ||| | |||| |||||||||||||||||||| |||| ||||||||||||||    
T  13605092 tgttttatcctggagacggcgtggttgttagtctaccttgcacaactt-gggtagtgccgcgaaacgtcttaaagagagcaacctagtcgtgactcaacc 13605190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 198 - 263
Target Start/End: Complemental strand, 35129704 - 35129640
Alignment:
Q  198 cgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtcttaaagagagcgacct 263  Q
    ||||||||||| |||| |||||||||||||||||| ||||| ||||||||||||||||||||||||    
T  35129704 cgtggttgatagtctg-cttgcacaattttgggcagtgccatgaaacgtcttaaagagagcgacct 35129640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 179 - 275
Target Start/End: Original strand, 22698243 - 22698338
Alignment:
Q  179 tgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtcttaaagagagcgacctggtcgtgactca 275  Q
    ||||||||||||||| ||||| ||||| || |||  |||||||||||  ||  | |||| |||||||||||||||||||||||||||||||||||||    
T  22698243 tgttttatcctggagacggcgcggttgctagtctaccttgcacaattcaggt-agtgccgcgaaacgtcttaaagagagcgacctggtcgtgactca 22698338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 179 - 275
Target Start/End: Complemental strand, 31981655 - 31981560
Alignment:
Q  179 tgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtcttaaagagagcgacctggtcgtgactca 275  Q
    ||||||||||||||| ||||| ||||| || |||  |||||||||||| ||  | |||| |||||||||||||||| ||||||||||||||||||||    
T  31981655 tgttttatcctggagacggcgcggttgctagtctaccttgcacaatttaggt-agtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactca 31981560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 179 - 275
Target Start/End: Complemental strand, 34142175 - 34142080
Alignment:
Q  179 tgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtcttaaagagagcgacctggtcgtgactca 275  Q
    ||||||||||||||| ||||| ||||| || |||  ||||||||| || ||| |  |||||||||||||||||||| ||||||||||||||||||||    
T  34142175 tgttttatcctggagacggcgcggttgctagtctaccttgcacaactt-gggtagagccacgaaacgtcttaaagaaagcgacctggtcgtgactca 34142080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 179 - 275
Target Start/End: Complemental strand, 34154791 - 34154696
Alignment:
Q  179 tgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtcttaaagagagcgacctggtcgtgactca 275  Q
    ||||||||||||||| ||||| ||||| || |||  ||||||||| || ||| |  |||||||||||||||||||| ||||||||||||||||||||    
T  34154791 tgttttatcctggagacggcgcggttgctagtctaccttgcacaactt-gggtagagccacgaaacgtcttaaagaaagcgacctggtcgtgactca 34154696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 144 - 203
Target Start/End: Original strand, 11534676 - 11534735
Alignment:
Q  144 aatgcagtagttaatcgaacagttgtagttgggcttgttttatcctggaggcggcgtggt 203  Q
    |||||||||||| | || ||||||||||||| ||||||||||||||||||||||||||||    
T  11534676 aatgcagtagttcaccgcacagttgtagttgagcttgttttatcctggaggcggcgtggt 11534735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 144 - 203
Target Start/End: Original strand, 11560186 - 11560245
Alignment:
Q  144 aatgcagtagttaatcgaacagttgtagttgggcttgttttatcctggaggcggcgtggt 203  Q
    |||||||||||| | || ||||||||||||| ||||||||||||||||||||||||||||    
T  11560186 aatgcagtagttcaccgcacagttgtagttgagcttgttttatcctggaggcggcgtggt 11560245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 164 - 351
Target Start/End: Original strand, 2760240 - 2760427
Alignment:
Q  164 agttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtcttaaagagagcgacct 263  Q
    ||||||| ||| |||||||||||||||||||||   ||||||||| |||| |||||| |||          ||||| |||||| ||||||||| ||||||    
T  2760240 agttgtatttgagcttgttttatcctggaggcg---tggttgatagtctgccttgcataat----------gccacaaaacgttttaaagagaacgacct 2760326  T
Q  264 ggtcgtgactcaacctagtaacaacttcggtgg------------ataatagaatttggaaatcc-aaatacaactgtttggaaatccaaaaacaacaga 350  Q
    |||||| ||| |||||||||||||||||| | |            | |||| |||||||||| || ||||||||||||||||||||||||||||||||||    
T  2760327 ggtcgtaacttaacctagtaacaacttcgctagttattctctaacaaaatacaatttggaaaaccaaaatacaactgtttggaaatccaaaaacaacaga 2760426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 166 - 255
Target Start/End: Original strand, 32815051 - 32815138
Alignment:
Q  166 ttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtcttaaagag 255  Q
    |||||| |||||| ||||||| |||| || | ||||||||||| |||| |||||||||||||||||| |||| |||||||||||||||||    
T  32815051 ttgtagctgggct-gttttatactgggggtgtcgtggttgatagtctg-cttgcacaattttgggcagtgccgcgaaacgtcttaaagag 32815138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 179 - 279
Target Start/End: Original strand, 5600972 - 5601072
Alignment:
Q  179 tgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtcttaaagagagcgacctggtcgtgactcaacc 278  Q
    ||||||||| ||||||||||| ||||| || |||  ||| |||||  | ||| | || | |||||||||||||||| |||||||||||||||||||||||    
T  5600972 tgttttatcttggaggcggcgcggttgttattctaccttacacaaactcgggtagtgtcgcgaaacgtcttaaagaaagcgacctggtcgtgactcaacc 5601071  T
Q  279 t 279  Q
    |    
T  5601072 t 5601072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 146 - 290
Target Start/End: Original strand, 9751775 - 9751920
Alignment:
Q  146 tgcagtagttaatcgaacagttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaa--ttttgggcattgccacgaaa 243  Q
    ||||||||||||||| ||| |||||||| | ||| |||||||||  || || |||| |||||| |    |||||||||  ||||||| | |||||| |||    
T  9751775 tgcagtagttaatcgcacaattgtagttagacttattttatcctacagacgacgtgattgatagttccccttgcacaattttttgggtagtgccacaaaa 9751874  T
Q  244 cgtcttaaagagagcgacctggtcgtgactcaacctagtaacaactt 290  Q
     |||||||||||||||| ||  ||||||||||||||||| |||||||    
T  9751875 tgtcttaaagagagcga-ctattcgtgactcaacctagtgacaactt 9751920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 179 - 278
Target Start/End: Complemental strand, 10642805 - 10642706
Alignment:
Q  179 tgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtcttaaagagagcgacctggtcgtgactcaacc 278  Q
    |||||||||| |||||||||| ||||| || |||  |||||||||  | ||  | ||||||||||||||||||||| |||||| | ||||||||||||||    
T  10642805 tgttttatccgggaggcggcgcggttgttagtctaccttgcacaacctcggatagtgccacgaaacgtcttaaagaaagcgacattgtcgtgactcaacc 10642706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 33 - 146
Target Start/End: Original strand, 19992718 - 19992828
Alignment:
Q  33 aaaaggaacggttaaagtatatcgtgcacgtactgataaagaattattcaatcctttgacgaaaggaattactagaaagaaagtcataaacacatccaat 132  Q
    ||||||||||| |||| || |||  | |||||||||| ||||||||||  |||||||||| |||||||| | |   ||||||||| ||||||||||||||    
T  19992718 aaaaggaacgggtaaattagatcaagtacgtactgatgaagaattatttgatcctttgacaaaaggaataatt---aagaaagtcctaaacacatccaat 19992814  T
Q  133 aggatgtgactaat 146  Q
     ||||| |||||||    
T  19992815 tggatgggactaat 19992828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 245 - 291
Target Start/End: Original strand, 2882821 - 2882867
Alignment:
Q  245 gtcttaaagagagcgacctggtcgtgactcaacctagtaacaacttc 291  Q
    ||||||||||||||||  |||||||||||||||||||||||||||||    
T  2882821 gtcttaaagagagcgatatggtcgtgactcaacctagtaacaacttc 2882867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 179 - 275
Target Start/End: Complemental strand, 21396794 - 21396699
Alignment:
Q  179 tgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtcttaaagagagcgacctggtcgtgactca 275  Q
    |||||||||||||||  |||| ||||| || |||  ||||||||| || ||  | |||| |||||||||||||||| ||||||||||||||||||||    
T  21396794 tgttttatcctggagatggcgcggttgctagtctaccttgcacaacttaggt-agtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactca 21396699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 179 - 275
Target Start/End: Original strand, 24192480 - 24192575
Alignment:
Q  179 tgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtcttaaagagagcgacctggtcgtgactca 275  Q
    ||||||||||||||| ||||| ||||| || |||  ||||||||| |  ||  | |||| |||||||||||||||| ||||||||||||||||||||    
T  24192480 tgttttatcctggagacggcgcggttgctagtctaccttgcacaactcaggt-agtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactca 24192575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 179 - 275
Target Start/End: Original strand, 29491237 - 29491332
Alignment:
Q  179 tgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtcttaaagagagcgacctggtcgtgactca 275  Q
    ||||||||||||||| ||||| ||||| || |||  ||||||||| || ||  | |||| |||||||||||||||| |||||| |||||||||||||    
T  29491237 tgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggt-agtgccgcgaaacgtcttaaagaaagcgacttggtcgtgactca 29491332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 179 - 275
Target Start/End: Complemental strand, 34376014 - 34375919
Alignment:
Q  179 tgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtcttaaagagagcgacctggtcgtgactca 275  Q
    ||||||||||||||| ||||| ||||| ||||||   |||||||| || ||  | |||| |||||||||||||||| ||||||||| ||||||||||    
T  34376014 tgttttatcctggagacggcgcggttgctaatctacgttgcacaacttaggt-agtgccgcgaaacgtcttaaagaaagcgacctgatcgtgactca 34375919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 245 - 291
Target Start/End: Original strand, 2863518 - 2863564
Alignment:
Q  245 gtcttaaagagagcgacctggtcgtgactcaacctagtaacaacttc 291  Q
    ||||||||||||||||| || | ||||||||||||||||||||||||    
T  2863518 gtcttaaagagagcgacatgatagtgactcaacctagtaacaacttc 2863564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 240 - 278
Target Start/End: Original strand, 11956762 - 11956800
Alignment:
Q  240 gaaacgtcttaaagagagcgacctggtcgtgactcaacc 278  Q
    |||||||||||||||||||||||||||| ||||||||||    
T  11956762 gaaacgtcttaaagagagcgacctggtcatgactcaacc 11956800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 151 - 277
Target Start/End: Complemental strand, 12851937 - 12851809
Alignment:
Q  151 tagttaatcgaacagttgtagttgggcttgtttt--atcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtct 248  Q
    |||||||||| ||| |||||||| | ||| ||||  ||||| || | ||| ||||||||| | || |||||||||||||||||| || | |||||| |||    
T  12851937 tagttaatcgcacaattgtagttagactttttttttatcctagaagtggcatggttgatagtttgccttgcacaattttgggcagtggcgcgaaacatct 12851838  T
Q  249 taaagagagcgacctggtcgtgactcaac 277  Q
    ||   |||||| | |||||||||||||||    
T  12851837 tatgaagagcgtcttggtcgtgactcaac 12851809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 234 - 275
Target Start/End: Complemental strand, 21401796 - 21401755
Alignment:
Q  234 tgccacgaaacgtcttaaagagagcgacctggtcgtgactca 275  Q
    |||| |||||||||||||||| ||||||||||||||||||||    
T  21401796 tgccgcgaaacgtcttaaagaaagcgacctggtcgtgactca 21401755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 299 - 348
Target Start/End: Complemental strand, 22609530 - 22609481
Alignment:
Q  299 aatagaatttggaaatccaaatacaactgtttggaaatccaaaaacaaca 348  Q
    ||||||||||||||||||||||||||  ||| |||||||||||| |||||    
T  22609530 aatagaatttggaaatccaaatacaatagttcggaaatccaaaaccaaca 22609481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 234 - 275
Target Start/End: Original strand, 24191437 - 24191478
Alignment:
Q  234 tgccacgaaacgtcttaaagagagcgacctggtcgtgactca 275  Q
    |||| |||||||||||||||| ||||||||||||||||||||    
T  24191437 tgccgcgaaacgtcttaaagaaagcgacctggtcgtgactca 24191478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #56
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 217 - 263
Target Start/End: Complemental strand, 14041749 - 14041703
Alignment:
Q  217 tgcacaattttgggcattgccacgaaacgtcttaaagagagcgacct 263  Q
    ||||||||||| |||| || |||||||||| ||||||||||||||||    
T  14041749 tgcacaattttaggcagtgtcacgaaacgttttaaagagagcgacct 14041703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 146 - 223
Target Start/End: Original strand, 4157336 - 4157413
Alignment:
Q  146 tgcagtagttaatcgaacagttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaa 223  Q
    |||||||||||| || || ||||||| || | |||||||||||| ||||| | |||||||| | | ||||||||||||    
T  4157336 tgcagtagttaaccgcaccgttgtagctgagtttgttttatcctagaggcagtgtggttgaaagtatgtcttgcacaa 4157413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 242 - 275
Target Start/End: Original strand, 6728397 - 6728430
Alignment:
Q  242 aacgtcttaaagagagcgacctggtcgtgactca 275  Q
    ||||||||||||| ||||||||||||||||||||    
T  6728397 aacgtcttaaagaaagcgacctggtcgtgactca 6728430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 302 - 343
Target Start/End: Original strand, 13736814 - 13736855
Alignment:
Q  302 agaatttggaaatccaaatacaactgtttggaaatccaaaaa 343  Q
    |||||||||||||||||||||||   ||||||||||||||||    
T  13736814 agaatttggaaatccaaatacaaagttttggaaatccaaaaa 13736855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 299 - 348
Target Start/End: Original strand, 15991829 - 15991878
Alignment:
Q  299 aatagaatttggaaatccaaatacaactgtttggaaatccaaaaacaaca 348  Q
    |||||||||||||||| ||||||||||  ||||||| ||||||| |||||    
T  15991829 aatagaatttggaaattcaaatacaacaatttggaattccaaaaccaaca 15991878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #61
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 299 - 348
Target Start/End: Original strand, 15999491 - 15999540
Alignment:
Q  299 aatagaatttggaaatccaaatacaactgtttggaaatccaaaaacaaca 348  Q
    |||||||||||||||| ||||||||||  ||||||| ||||||| |||||    
T  15999491 aatagaatttggaaattcaaatacaacaatttggaattccaaaaccaaca 15999540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #62
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 106 - 147
Target Start/End: Original strand, 22693832 - 22693873
Alignment:
Q  106 agaaagaaagtcataaacacatccaataggatgtgactaatg 147  Q
    ||||||||||||||||||||||||||||| ||  ||||||||    
T  22693832 agaaagaaagtcataaacacatccaatagtattagactaatg 22693873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #63
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 178 - 235
Target Start/End: Original strand, 31990898 - 31990955
Alignment:
Q  178 ttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattg 235  Q
    |||||||||| |||||||| ||||||||||||| |  ||||||||| |||| ||||||    
T  31990898 ttgttttatcgtggaggcgtcgtggttgataatattccttgcacaactttgagcattg 31990955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #64
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 307 - 347
Target Start/End: Original strand, 12406491 - 12406531
Alignment:
Q  307 ttggaaatccaaatacaactgtttggaaatccaaaaacaac 347  Q
    ||| ||||||||||||||| ||||| |||||||||||||||    
T  12406491 ttgaaaatccaaatacaacagtttgaaaatccaaaaacaac 12406531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #65
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 234 - 278
Target Start/End: Original strand, 17281618 - 17281662
Alignment:
Q  234 tgccacgaaacgtcttaaagagagcgacctggtcgtgactcaacc 278  Q
    |||| |||||||||||||||| |||||| || |||||||||||||    
T  17281618 tgccgcgaaacgtcttaaagaaagcgacatgctcgtgactcaacc 17281662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #66
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 149 - 213
Target Start/End: Original strand, 19995373 - 19995437
Alignment:
Q  149 agtagttaatcgaacagttgtagttgggcttgttttatcctggaggcggcgtggttgataatctg 213  Q
    ||||||||| || | |||||||| |||||||||||||||| | ||| | ||||||||||| ||||    
T  19995373 agtagttaaccgcatagttgtagctgggcttgttttatcccgaaggtgccgtggttgatagtctg 19995437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 129; Significance: 1e-66; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 146 - 349
Target Start/End: Original strand, 166053 - 166257
Alignment:
Q  146 tgcagtagttaatcgaacagttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacg 245  Q
    ||||||| |||| || ||||||| || |||||||||||||||||||||||||||||||||||| | |||||||||||||||| |||| ||||||||||||    
T  166053 tgcagtaattaaccgcacagttgcagctgggcttgttttatcctggaggcggcgtggttgatagtatgtcttgcacaatttttggcagtgccacgaaacg 166152  T
Q  246 tcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtggataatagaatttggaaatcc-aaatacaactgtttggaaatccaaaaac 344  Q
    ||||||||||||||||||||| |||||||||||||||| ||| |||||| || || |||||||||||| || ||||||||| ||||||||||||||||||    
T  166153 tcttaaagagagcgacctggttgtgactcaacctagtatcaatttcggtagaaaacagaatttggaaaaccaaaatacaacagtttggaaatccaaaaac 166252  T
Q  345 aacag 349  Q
    |||||    
T  166253 aacag 166257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054 (Bit Score: 124; Significance: 1e-63; HSPs: 2)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 149 - 348
Target Start/End: Complemental strand, 25524 - 25325
Alignment:
Q  149 agtagttaatcgaacagttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtct 248  Q
    ||||||||| || ||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||  ||| || |||| |||||||    
T  25524 agtagttaaccgcacagttgtagttgggcttgttttatcctggacgcggcgtggttgatagtctgtcttgcacaattttacgcagtgtcacgtaacgtct 25425  T
Q  249 taaagagagcgacctggtcgtgactcaacctagtaacaacttcggtggataatagaatttggaaatccaaatacaactgtttggaaatccaaaaacaaca 348  Q
    ||||||||| |||||  | ||||||||||||||||||||||||| | |||||||||||||||||||||||||||| | ||||| ||||||||| ||||||    
T  25424 taaagagagtgacctaattgtgactcaacctagtaacaacttcgatagataatagaatttggaaatccaaatacagcagtttgaaaatccaaagacaaca 25325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054; HSP #2
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 144 - 221
Target Start/End: Complemental strand, 29285 - 29209
Alignment:
Q  144 aatgcagtagttaatcgaacagttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcac 221  Q
    |||||||||||||| || |||||| ||||| | ||| |||||||||| || |||||||||||||| | ||||||||||    
T  29285 aatgcagtagttaaccgcacagttatagttagacttattttatcctgaagacggcgtggttgatagt-tgtcttgcac 29209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057 (Bit Score: 123; Significance: 4e-63; HSPs: 1)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 146 - 348
Target Start/End: Complemental strand, 35762 - 35560
Alignment:
Q  146 tgcagtagttaatcgaacagttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacg 245  Q
    |||||||||||| || |||||||||| ||| |||||||||||||||||||||||||||||||| |||| ||||||||||||||| || || |||||||||    
T  35762 tgcagtagttaaccgcacagttgtagctggacttgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttggccagtgtcacgaaacg 35663  T
Q  246 tcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtggataatagaatttggaaatccaaatacaactgtttggaaatccaaaaaca 345  Q
    |||||||||||||| | ||||||| ||| ||||||||||||||||| ||  ||||||||||||||||||||||||||||| ||||| |||| |||||| |    
T  35662 tcttaaagagagcggcatggtcgtaacttaacctagtaacaacttcagtaaataatagaatttggaaatccaaatacaacagtttgaaaatgcaaaaata 35563  T
Q  346 aca 348  Q
    |||    
T  35562 aca 35560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045 (Bit Score: 120; Significance: 3e-61; HSPs: 1)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 146 - 348
Target Start/End: Complemental strand, 83194 - 82991
Alignment:
Q  146 tgcagtagttaatcgaacagttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacg 245  Q
    |||||||||||| || ||||||| || || ||||||||||||||||||||||| ||||||||| |||| |||||| |||||||||   || |||||||||    
T  83194 tgcagtagttaaccgcacagttgcagctgagcttgttttatcctggaggcggcatggttgatagtctgccttgcataattttgggtggtgtcacgaaacg 83095  T
Q  246 tcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtggataatagaatttggaaatcc-aaatacaactgtttggaaatccaaaaac 344  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| || || |||||||||||| || ||||||||| |||| |||||||||||||    
T  83094 tcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtagaaaacagaatttggaaaaccaaaatacaacagtttagaaatccaaaaac 82995  T
Q  345 aaca 348  Q
    ||||    
T  82994 aaca 82991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0061 (Bit Score: 85; Significance: 2e-40; HSPs: 1)
Name: scaffold0061
Description:

Target: scaffold0061; HSP #1
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 33 - 148
Target Start/End: Original strand, 48187 - 48303
Alignment:
Q  33 aaaaggaacggttaaagtatatcgtgcacgtactgat-aaagaattattcaatcctttgacgaaaggaattactagaaagaaagtcataaacacatccaa 131  Q
    ||||||||||||||||||||||| || |||||||||| ||| ||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  48187 aaaaggaacggttaaagtatatcatgtacgtactgatgaaacaattagtcaatcctttgacgaaaggaattactagaaagaaagtcctaaacacatccaa 48286  T
Q  132 taggatgtgactaatgc 148  Q
    ||||||| |||||||||    
T  48287 taggatgggactaatgc 48303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 85; Significance: 2e-40; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 33 - 148
Target Start/End: Complemental strand, 150446 - 150330
Alignment:
Q  33 aaaaggaacggttaaagtatatcgtgcacgtactgat-aaagaattattcaatcctttgacgaaaggaattactagaaagaaagtcataaacacatccaa 131  Q
    ||||||||||||||||||||||| || |||||||||| ||| ||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  150446 aaaaggaacggttaaagtatatcatgtacgtactgatgaaacaattagtcaatcctttgacgaaaggaattactagaaagaaagtcctaaacacatccaa 150347  T
Q  132 taggatgtgactaatgc 148  Q
    ||||||| |||||||||    
T  150346 taggatgggactaatgc 150330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015 (Bit Score: 85; Significance: 2e-40; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 33 - 148
Target Start/End: Original strand, 212600 - 212716
Alignment:
Q  33 aaaaggaacggttaaagtatatcgtgcacgtactgataaagaattattcaatcctttgacgaaaggaattactagaaagaaagtcat-aaacacatccaa 131  Q
    ||||||||||||||||||||||| || ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| | ||||||||| ||    
T  212600 aaaaggaacggttaaagtatatcatgtacgtactgataaagaattagtcaatcctttgacgaaaggaattactagaaagaaagtcctaaaacacatcgaa 212699  T
Q  132 taggatgtgactaatgc 148  Q
    ||||||| |||||||||    
T  212700 taggatgagactaatgc 212716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0240 (Bit Score: 84; Significance: 8e-40; HSPs: 1)
Name: scaffold0240
Description:

Target: scaffold0240; HSP #1
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 168 - 299
Target Start/End: Complemental strand, 4097 - 3966
Alignment:
Q  168 gtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtcttaaagagagcgacctggtc 267  Q
    ||||||||||||||||||||||||||||||||||||||||  | ||||||||| || ||| ||||||||||  ||| ||||||||||||||||  |||||    
T  4097 gtagttgggcttgttttatcctggaggcggcgtggttgatggtatgtcttgcaaaaattttggcattgccataaaaagtcttaaagagagcgatatggtc 3998  T
Q  268 gtgactcaacctagtaacaacttcggtggata 299  Q
    ||||||||||||||||||||||||||| ||||    
T  3997 gtgactcaacctagtaacaacttcggtagata 3966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2020 (Bit Score: 78; Significance: 3e-36; HSPs: 1)
Name: scaffold2020
Description:

Target: scaffold2020; HSP #1
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 162 - 349
Target Start/End: Complemental strand, 483 - 282
Alignment:
Q  162 acagttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtcttaaagagagcgac 261  Q
    |||||||||| || ||||||||||||||||||||| ||||||||||| | |||||||||||| ||||| || ||||| ||||||||||||| | ||||||    
T  483 acagttgtagctgagcttgttttatcctggaggcgacgtggttgatagtgtgtcttgcacaactttggacaatgccatgaaacgtcttaaaaaaagcgac 384  T
Q  262 ctggtcgtgactcaacctagta---acaacttcggtggat-----------aatagaatttggaaatccaaatacaactgtttggaaatccaaaaacaac 347  Q
     | |||||||||||||||||||   ||||||||||| |||           || ||||||| |||||| ||||||||| |||||||||||||||||||||    
T  383 atagtcgtgactcaacctagtaattacaacttcggtagatattctttttcaaaaagaatttcgaaatctaaatacaacagtttggaaatccaaaaacaac 284  T
Q  348 ag 349  Q
    ||    
T  283 ag 282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 78; Significance: 3e-36; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 162 - 349
Target Start/End: Original strand, 165012 - 165213
Alignment:
Q  162 acagttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtcttaaagagagcgac 261  Q
    |||||||||| || ||||||||||||||||||||| ||||||||||| | |||||||||||| ||||| || ||||| ||||||||||||| | ||||||    
T  165012 acagttgtagctgagcttgttttatcctggaggcgacgtggttgatagtgtgtcttgcacaactttggacaatgccatgaaacgtcttaaaaaaagcgac 165111  T
Q  262 ctggtcgtgactcaacctagta---acaacttcggtggat-----------aatagaatttggaaatccaaatacaactgtttggaaatccaaaaacaac 347  Q
     | |||||||||||||||||||   ||||||||||| |||           || ||||||| |||||| ||||||||| |||||||||||||||||||||    
T  165112 atagtcgtgactcaacctagtaattacaacttcggtagatattctttttcaaaaagaatttcgaaatctaaatacaacagtttggaaatccaaaaacaac 165211  T
Q  348 ag 349  Q
    ||    
T  165212 ag 165213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 78; Significance: 3e-36; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 146 - 287
Target Start/End: Complemental strand, 255945 - 255804
Alignment:
Q  146 tgcagtagttaatcgaacagttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacg 245  Q
    |||||||||||| |  |||||||||| ||| |||||||||||||||||||||| | ||||||| | ||||||||||||||||||| | |||||||||||     
T  255945 tgcagtagttaaccacacagttgtagctggacttgttttatcctggaggcggcatagttgatagtatgtcttgcacaattttgggtagtgccacgaaacc 255846  T
Q  246 tcttaaagagagcgacctggtcgtgactcaacctagtaacaa 287  Q
    |||||||||||| |||||||||||| || ||| |||||||||    
T  255845 tcttaaagagagtgacctggtcgtgtcttaacatagtaacaa 255804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0060 (Bit Score: 74; Significance: 8e-34; HSPs: 2)
Name: scaffold0060
Description:

Target: scaffold0060; HSP #1
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 33 - 145
Target Start/End: Original strand, 51146 - 51255
Alignment:
Q  33 aaaaggaacggttaaagtatatcgtgcacgtactgataaagaattattcaatcctttgacgaaaggaattactagaaagaaagtcataaacacatccaat 132  Q
    ||||||||||||||||||||||| || ||| | |||  |||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  51146 aaaaggaacggttaaagtatatcatgtacgga-tga--aagaattagtcaatcctttgacgaaaggaattactagaaagaaagtcctaaacacatccaat 51242  T
Q  133 aggatgtgactaa 145  Q
    |||||||||||||    
T  51243 aggatgtgactaa 51255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0060; HSP #2
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 179 - 284
Target Start/End: Complemental strand, 37105 - 37001
Alignment:
Q  179 tgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtcttaaagagagcgacctggtcgtgactcaacc 278  Q
    ||||||||||||||| ||||| ||||| || |||  |||||||||||| ||  | |||| |||||||||||||||| |||||||||||||||||||| ||    
T  37105 tgttttatcctggagacggcgcggttgctagtctaccttgcacaatttaggt-agtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactcaccc 37007  T
Q  279 tagtaa 284  Q
     |||||    
T  37006 cagtaa 37001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0070 (Bit Score: 67; Significance: 1e-29; HSPs: 2)
Name: scaffold0070
Description:

Target: scaffold0070; HSP #1
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 47 - 148
Target Start/End: Complemental strand, 60256 - 60155
Alignment:
Q  47 aagtatatcgtgcacgtactgat-aaagaattattcaatcctttgacgaaaggaattactagaaagaaagtcataaacacatccaataggatgtgactaa 145  Q
    ||||||||| || |||||||||| ||||||||| |||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||| ||||||    
T  60256 aagtatatcatgtacgtactgatgaaagaattagtcaatcctttgacgaaaggaataactagaaagaaagtcctaaacacatccaataggatg-gactaa 60158  T
Q  146 tgc 148  Q
    |||    
T  60157 tgc 60155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0070; HSP #2
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 47 - 148
Target Start/End: Complemental strand, 64458 - 64357
Alignment:
Q  47 aagtatatcgtgcacgtactgat-aaagaattattcaatcctttgacgaaaggaattactagaaagaaagtcataaacacatccaataggatgtgactaa 145  Q
    ||||||||| || |||||||||| ||||||||| |||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||| ||||||    
T  64458 aagtatatcatgtacgtactgatgaaagaattagtcaatcctttgacgaaaggaataactagaaagaaagtcctaaacacatccaataggatg-gactaa 64360  T
Q  146 tgc 148  Q
    |||    
T  64359 tgc 64357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0108 (Bit Score: 64; Significance: 7e-28; HSPs: 1)
Name: scaffold0108
Description:

Target: scaffold0108; HSP #1
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 33 - 148
Target Start/End: Complemental strand, 21597 - 21482
Alignment:
Q  33 aaaaggaacggttaaagtatatcgtgcacgtactgataaagaattattcaatcctttgacgaaaggaattactagaaagaaagtcataaacacatccaat 132  Q
    ||||| ||||||| ||||| ||| || | ||||||||||||||||| | ||||||||||| ||| |||||||||||||||||||| |||||||||||| |    
T  21597 aaaagaaacggttgaagtagatcatgtatgtactgataaagaattagttaatcctttgacaaaatgaattactagaaagaaagtcctaaacacatccatt 21498  T
Q  133 aggatgtgactaatgc 148  Q
    |||||| |||||||||    
T  21497 aggatgggactaatgc 21482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0184 (Bit Score: 63; Significance: 3e-27; HSPs: 1)
Name: scaffold0184
Description:

Target: scaffold0184; HSP #1
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 146 - 292
Target Start/End: Complemental strand, 2436 - 2291
Alignment:
Q  146 tgcagtagttaatcgaacagttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacg 245  Q
    ||||||||||||||  |||||||||  || | ||||||||| || |||||||||||||||||| ||||||||||||||||||   || || ||| |||||    
T  2436 tgcagtagttaatctcacagttgtacctgagtttgttttatactagaggcggcgtggttgata-tctgtcttgcacaattttaaacaatggcacaaaacg 2338  T
Q  246 tcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcg 292  Q
    | ||||||||| ||||||| || |||||||||||| |||||||||||    
T  2337 tattaaagagaacgacctgatcatgactcaacctaataacaacttcg 2291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 56; Significance: 4e-23; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 162 - 284
Target Start/End: Original strand, 171700 - 171820
Alignment:
Q  162 acagttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtcttaaagagagcgac 261  Q
    ||||||||||||||||| |||||||||| | | || ||||||||||| |||| ||||||||||||| |||| ||||||||||||||||||||||||||||    
T  171700 acagttgtagttgggct-gttttatcctag-gacgtcgtggttgatagtctg-cttgcacaattttaggcagtgccacgaaacgtcttaaagagagcgac 171796  T
Q  262 ctggtc-gtgactcaacctagtaa 284  Q
    || ||| | |||||| ||||||||    
T  171797 ctagtctgcgactcagcctagtaa 171820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0097 (Bit Score: 54; Significance: 7e-22; HSPs: 1)
Name: scaffold0097
Description:

Target: scaffold0097; HSP #1
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 203 - 348
Target Start/End: Complemental strand, 15355 - 15197
Alignment:
Q  203 ttgataatctgtcttgcacaattttgggcattgccacgaaacgtcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtggat---- 298  Q
    |||||| ||||||||||||||||||| ||| ||| ||||||| |||||||  ||| ||  |||||||||||||||||||||||||||||||| |||        
T  15355 ttgatagtctgtcttgcacaattttgagcagtgctacgaaacatcttaaaaggagtgatatggtcgtgactcaacctagtaacaacttcggtagatattt 15256  T
Q  299 --------aatagaatttggaaatcc-aaatacaactgtttggaaatccaaaaacaaca 348  Q
            ||||||||||||||| || ||||||||| ||||| ||||||||||||||||    
T  15255 tcttaaaaaatagaatttggaaaaccaaaatacaacagtttgtaaatccaaaaacaaca 15197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0132 (Bit Score: 52; Significance: 1e-20; HSPs: 2)
Name: scaffold0132
Description:

Target: scaffold0132; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 179 - 278
Target Start/End: Original strand, 2772 - 2870
Alignment:
Q  179 tgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtcttaaagagagcgacctggtcgtgactcaacc 278  Q
    ||||||||||||||| ||||||||||| || |||  ||||||||| || ||| | || ||||||||||||||||||| ||||||||||||||||||||||    
T  2772 tgttttatcctggagacggcgtggttgttagtctaccttgcacaactt-gggtagtgtcacgaaacgtcttaaagagcgcgacctggtcgtgactcaacc 2870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0132; HSP #2
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 179 - 278
Target Start/End: Original strand, 10732 - 10830
Alignment:
Q  179 tgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtcttaaagagagcgacctggtcgtgactcaacc 278  Q
    ||||||||||||||| ||||||||||| || |||  ||||||||| || ||| | || ||||||||||||||||||| ||||||||||||||||||||||    
T  10732 tgttttatcctggagacggcgtggttgttagtctaccttgcacaactt-gggtagtgtcacgaaacgtcttaaagagcgcgacctggtcgtgactcaacc 10830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 52; Significance: 1e-20; HSPs: 4)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 179 - 278
Target Start/End: Complemental strand, 1660 - 1562
Alignment:
Q  179 tgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtcttaaagagagcgacctggtcgtgactcaacc 278  Q
    ||||||||||||||| ||||||||||| || |||  ||||||||| || ||| | |||| ||||||||||||||||||||||||||||||||||| ||||    
T  1660 tgttttatcctggagacggcgtggttgttagtctaccttgcacaactt-gggtagtgccgcgaaacgtcttaaagagagcgacctggtcgtgacttaacc 1562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 179 - 278
Target Start/End: Complemental strand, 7141 - 7043
Alignment:
Q  179 tgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtcttaaagagagcgacctggtcgtgactcaacc 278  Q
    ||||||||||||||| ||||||||||| || |||  ||||||||| || ||| | |||| |||||||||||||||||| |||||||||||| ||||||||    
T  7141 tgttttatcctggagacggcgtggttgttagtctaccttgcacaactt-gggtagtgccgcgaaacgtcttaaagagaacgacctggtcgtaactcaacc 7043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #3
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 147 - 205
Target Start/End: Original strand, 155486 - 155544
Alignment:
Q  147 gcagtagttaatcgaacagttgtagttgggcttgttttatcctggaggcggcgtggttg 205  Q
    |||||||||||||| |||||||||| ||  ||||||||||||| |||||||||||||||    
T  155486 gcagtagttaatcgcacagttgtagctgaacttgttttatcctagaggcggcgtggttg 155544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #4
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 236 - 271
Target Start/End: Original strand, 155552 - 155587
Alignment:
Q  236 ccacgaaacgtcttaaagagagcgacctggtcgtga 271  Q
    ||||||||||||||||||||| ||||||||||||||    
T  155552 ccacgaaacgtcttaaagagaacgacctggtcgtga 155587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0128 (Bit Score: 45; Significance: 2e-16; HSPs: 1)
Name: scaffold0128
Description:

Target: scaffold0128; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 149 - 281
Target Start/End: Complemental strand, 13397 - 13265
Alignment:
Q  149 agtagttaatcgaacagttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtct 248  Q
    ||||||||| || |||||||||||||  |||||| |||| |||||||  | ||||||||| |||  |||| ||||||||||||| || ||| ||||||||    
T  13397 agtagttaaccgcacagttgtagttgaacttgttgtatcttggaggcaccatggttgatagtctaccttgaacaattttgggcagtgtcaccaaacgtct 13298  T
Q  249 taaagagagcgacctggtcgtgactcaacctag 281  Q
    |||||| || ||| || ||| ||||| ||||||    
T  13297 taaagaaagtgacttgatcgggactccacctag 13265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0055 (Bit Score: 45; Significance: 2e-16; HSPs: 1)
Name: scaffold0055
Description:

Target: scaffold0055; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 179 - 275
Target Start/End: Complemental strand, 3153 - 3058
Alignment:
Q  179 tgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtcttaaagagagcgacctggtcgtgactca 275  Q
    ||||||||||||||| ||||| ||||| || |||  |||||||||||  ||  | |||| |||||||||||||||||||||||||||||||||||||    
T  3153 tgttttatcctggagacggcgcggttgctagtctaccttgcacaattcaggt-agtgccgcgaaacgtcttaaagagagcgacctggtcgtgactca 3058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0052 (Bit Score: 45; Significance: 2e-16; HSPs: 1)
Name: scaffold0052
Description:

Target: scaffold0052; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 179 - 275
Target Start/End: Original strand, 81382 - 81477
Alignment:
Q  179 tgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtcttaaagagagcgacctggtcgtgactca 275  Q
    ||||||||||||||| ||||| ||||| || |||  |||||||||||  ||  | |||| |||||||||||||||||||||||||||||||||||||    
T  81382 tgttttatcctggagacggcgcggttgctagtctaccttgcacaattcaggt-agtgccgcgaaacgtcttaaagagagcgacctggtcgtgactca 81477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0690 (Bit Score: 42; Significance: 0.000000000000009; HSPs: 1)
Name: scaffold0690
Description:

Target: scaffold0690; HSP #1
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 33 - 148
Target Start/End: Complemental strand, 6966 - 6854
Alignment:
Q  33 aaaaggaacggttaaagtatatcgtgcacgtactgataaagaattattcaatcctttgacgaaaggaattactagaaagaaagtcataaacacatccaat 132  Q
    ||||||||||  ||||||||||| || ||||| |||| |||||||| |  ||||||||||||||||||| |||   || |||||| ||||||||||||||    
T  6966 aaaaggaacgaataaagtatatcatgtacgtaatgatgaagaattaattgatcctttgacgaaaggaataact---aacaaagtcctaaacacatccaat 6870  T
Q  133 aggatgtgactaatgc 148  Q
     | ||| |||||||||    
T  6869 ggaatgagactaatgc 6854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0594 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 1)
Name: scaffold0594
Description:

Target: scaffold0594; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 179 - 275
Target Start/End: Original strand, 9208 - 9303
Alignment:
Q  179 tgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtcttaaagagagcgacctggtcgtgactca 275  Q
    ||||||||||||||| ||||| ||||| || |||  ||||||||| || ||  | |||| |||||||||||||||| ||||||||||||||||||||    
T  9208 tgttttatcctggagacggcgcggttgctagtcttccttgcacaacttaggt-agtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactca 9303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0166 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 2)
Name: scaffold0166
Description:

Target: scaffold0166; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 179 - 275
Target Start/End: Original strand, 13740 - 13835
Alignment:
Q  179 tgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtcttaaagagagcgacctggtcgtgactca 275  Q
    ||||||||||||||| ||||| ||||| || |||  ||||||||| || ||  | |||| |||||||||||||||| ||||||||||||||||||||    
T  13740 tgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggt-agtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactca 13835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0166; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 234 - 284
Target Start/End: Original strand, 19252 - 19302
Alignment:
Q  234 tgccacgaaacgtcttaaagagagcgacctggtcgtgactcaacctagtaa 284  Q
    |||| |||||||||||||||| |||||| ||||||||||||| || |||||    
T  19252 tgccgcgaaacgtcttaaagaaagcgacatggtcgtgactcaccccagtaa 19302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0067 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 1)
Name: scaffold0067
Description:

Target: scaffold0067; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 234 - 278
Target Start/End: Original strand, 34023 - 34067
Alignment:
Q  234 tgccacgaaacgtcttaaagagagcgacctggtcgtgactcaacc 278  Q
    |||| ||||||||||||||||||||||||||||||||||||||||    
T  34023 tgccgcgaaacgtcttaaagagagcgacctggtcgtgactcaacc 34067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 2)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 179 - 275
Target Start/End: Complemental strand, 31640 - 31545
Alignment:
Q  179 tgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtcttaaagagagcgacctggtcgtgactca 275  Q
    ||||||||||||||| ||||| ||||| || |||  ||||||||| || ||  | |||| |||||||||||||||| ||||||||||||||||||||    
T  31640 tgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggt-agtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactca 31545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 179 - 275
Target Start/End: Complemental strand, 26468 - 26373
Alignment:
Q  179 tgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtcttaaagagagcgacctggtcgtgactca 275  Q
    ||||||||||||||| ||||| ||||| || |||  |||||||||||  ||  | |||| ||||||||||||||||||||||| || |||| |||||    
T  26468 tgttttatcctggagacggcgcggttgctagtctaccttgcacaattcaggt-agtgccgcgaaacgtcttaaagagagcgacttgatcgtaactca 26373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0517 (Bit Score: 37; Significance: 0.000000000009; HSPs: 1)
Name: scaffold0517
Description:

Target: scaffold0517; HSP #1
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 179 - 275
Target Start/End: Complemental strand, 3658 - 3563
Alignment:
Q  179 tgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtcttaaagagagcgacctggtcgtgactca 275  Q
    ||||||||||||||  ||||| ||||| || |||  ||||||||| || ||  | |||| |||||||||||||||| ||||||||||||||||||||    
T  3658 tgttttatcctggaaacggcgcggttgctagtctaccttgcacaacttaggt-agtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactca 3563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1050 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold1050
Description:

Target: scaffold1050; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 146 - 263
Target Start/End: Complemental strand, 1268 - 1151
Alignment:
Q  146 tgcagtagttaatcgaacagttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacg 245  Q
    |||||||||||| || ||||| |||| ||  ||||||||  ||||||||| |||||||| ||| || | |||||| ||||||| ||| || |||  ||||    
T  1268 tgcagtagttaaccgcacagtcgtagctgaacttgtttttgcctggaggcagcgtggtttatagtccgccttgcataattttgtgcaatgtcacagaacg 1169  T
Q  246 tcttaaagagagcgacct 263  Q
    ||||||| ||||| ||||    
T  1168 tcttaaatagagcaacct 1151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 245 - 283
Target Start/End: Original strand, 1291 - 1329
Alignment:
Q  245 gtcttaaagagagcgacctggtcgtgactcaacctagta 283  Q
    |||||||||| ||||||||||||||||||||||| ||||    
T  1291 gtcttaaagaaagcgacctggtcgtgactcaacccagta 1329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University