View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15374_low_15 (Length: 261)
Name: NF15374_low_15
Description: NF15374
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15374_low_15 |
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Alignment Details
Target: chr3 (Bit Score: 223; Significance: 1e-123; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 223; E-Value: 1e-123
Query Start/End: Original strand, 24 - 246
Target Start/End: Original strand, 31384508 - 31384730
Alignment:
| Q |
24 |
tcatgttgtttttatttaataattatactttctagttctgcatatattaagtgattagttattggtctgttccttgcattaagtgttcagttattggtct |
123 |
Q |
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| T |
31384508 |
tcatgttgtttttatttaataattatactttctagttctgcatatattaagtgattagttattggtctgttccttgcattaagtgttcagttattggtct |
31384607 |
T |
|
| Q |
124 |
gttccttgcatgatgatgatattgtggtaagctaacttggaagcttagaaatgtgtattgtggattttctcttcccttccctggttttgcaaacctctgt |
223 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
31384608 |
gttccttgcatgatgatgatattgtggtaagctaacttggaagcttagaaatgtgtattgtggattttctcttcccttccctggttttgcaaacctctgt |
31384707 |
T |
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| Q |
224 |
aatcttgtactgtttaatgttat |
246 |
Q |
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||||||||||||||||||||||| |
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| T |
31384708 |
aatcttgtactgtttaatgttat |
31384730 |
T |
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