View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF15377_high_8 (Length: 238)

Name: NF15377_high_8
Description: NF15377
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF15377_high_8
NF15377_high_8
[»] chr3 (53 HSPs)
chr3 (16-222)||(17544213-17544419)
chr3 (16-129)||(30220400-30220513)
chr3 (16-129)||(20729038-20729151)
chr3 (16-129)||(31548946-31549059)
chr3 (16-129)||(2873254-2873367)
chr3 (16-129)||(7486260-7486373)
chr3 (16-129)||(11190216-11190329)
chr3 (16-129)||(19305080-19305193)
chr3 (16-129)||(25584377-25584490)
chr3 (16-127)||(19301896-19302007)
chr3 (19-129)||(29344269-29344379)
chr3 (19-129)||(41976705-41976815)
chr3 (16-129)||(3840206-3840319)
chr3 (16-129)||(17040413-17040526)
chr3 (16-129)||(24125189-24125302)
chr3 (16-129)||(24128466-24128579)
chr3 (16-129)||(45896070-45896183)
chr3 (16-129)||(49743311-49743424)
chr3 (16-132)||(48064426-48064542)
chr3 (16-127)||(16243566-16243676)
chr3 (16-129)||(43926525-43926638)
chr3 (16-129)||(54723431-54723544)
chr3 (19-115)||(32287718-32287814)
chr3 (16-131)||(10881168-10881283)
chr3 (16-131)||(22417225-22417340)
chr3 (16-126)||(11784458-11784568)
chr3 (16-126)||(12561625-12561735)
chr3 (16-129)||(22783282-22783395)
chr3 (16-129)||(22787646-22787759)
chr3 (16-121)||(27091592-27091697)
chr3 (17-128)||(15195694-15195805)
chr3 (16-127)||(43809271-43809382)
chr3 (16-126)||(25443251-25443361)
chr3 (16-126)||(32367520-32367630)
chr3 (16-102)||(35751171-35751257)
chr3 (16-129)||(46884643-46884756)
chr3 (34-126)||(54719664-54719756)
chr3 (16-115)||(28008461-28008560)
chr3 (27-129)||(2775172-2775274)
chr3 (27-129)||(2778415-2778517)
chr3 (19-121)||(30690433-30690535)
chr3 (16-102)||(47051212-47051298)
chr3 (16-129)||(34984244-34984357)
chr3 (16-101)||(47054643-47054728)
chr3 (16-99)||(22360166-22360249)
chr3 (16-103)||(50461940-50462027)
chr3 (19-104)||(18542265-18542350)
chr3 (16-77)||(52309949-52310010)
chr3 (34-126)||(17141101-17141193)
chr3 (16-124)||(22994089-22994196)
chr3 (34-126)||(52988098-52988190)
chr3 (16-99)||(22370069-22370152)
chr3 (35-96)||(3293357-3293418)
[»] chr7 (28 HSPs)
chr7 (16-128)||(13809922-13810034)
chr7 (16-129)||(18562942-18563055)
chr7 (16-129)||(23225315-23225428)
chr7 (16-129)||(23234468-23234581)
chr7 (16-129)||(20593870-20593983)
chr7 (16-126)||(9405852-9405962)
chr7 (16-129)||(4596418-4596531)
chr7 (16-129)||(4695116-4695229)
chr7 (16-129)||(9865136-9865249)
chr7 (16-129)||(17730407-17730519)
chr7 (16-129)||(10468736-10468849)
chr7 (18-107)||(14683855-14683944)
chr7 (16-131)||(26144917-26145032)
chr7 (16-126)||(20081127-20081237)
chr7 (34-126)||(3068404-3068496)
chr7 (17-129)||(7227119-7227231)
chr7 (16-103)||(6603076-6603163)
chr7 (16-131)||(26136537-26136652)
chr7 (18-128)||(9273531-9273641)
chr7 (16-126)||(10344809-10344919)
chr7 (16-129)||(9133168-9133281)
chr7 (16-96)||(11398435-11398515)
chr7 (16-103)||(16165366-16165453)
chr7 (16-126)||(9080772-9080882)
chr7 (16-126)||(22612016-22612126)
chr7 (16-103)||(13842258-13842345)
chr7 (16-103)||(48645092-48645179)
chr7 (16-126)||(37166556-37166666)
[»] chr4 (43 HSPs)
chr4 (17-129)||(53094111-53094223)
chr4 (16-121)||(8875166-8875271)
chr4 (16-129)||(19820332-19820445)
chr4 (16-129)||(19827094-19827207)
chr4 (16-129)||(8877906-8878019)
chr4 (16-129)||(24150276-24150389)
chr4 (16-129)||(39501252-39501365)
chr4 (16-129)||(48415934-48416047)
chr4 (16-129)||(52006935-52007048)
chr4 (16-129)||(52531340-52531453)
chr4 (16-129)||(27691548-27691661)
chr4 (16-129)||(40794606-40794719)
chr4 (16-129)||(40903488-40903601)
chr4 (16-129)||(48637109-48637222)
chr4 (16-122)||(27677459-27677565)
chr4 (16-129)||(34018185-34018298)
chr4 (16-109)||(44164407-44164500)
chr4 (16-131)||(18673475-18673590)
chr4 (16-131)||(25961660-25961775)
chr4 (16-129)||(15436874-15436985)
chr4 (16-129)||(12782509-12782622)
chr4 (16-129)||(24044545-24044658)
chr4 (16-129)||(38283893-38284006)
chr4 (16-103)||(15405489-15405576)
chr4 (16-103)||(56195157-56195244)
chr4 (20-129)||(15430264-15430371)
chr4 (35-124)||(21419397-21419486)
chr4 (16-128)||(3718729-3718841)
chr4 (34-122)||(30392184-30392272)
chr4 (34-126)||(53009980-53010072)
chr4 (16-103)||(29324455-29324542)
chr4 (34-129)||(29545296-29545391)
chr4 (16-103)||(34320322-34320409)
chr4 (16-103)||(46955883-46955970)
chr4 (16-101)||(48014452-48014537)
chr4 (16-103)||(33926597-33926684)
chr4 (35-126)||(35509572-35509663)
chr4 (41-124)||(40493796-40493879)
chr4 (16-103)||(44809360-44809447)
chr4 (16-129)||(11195279-11195392)
chr4 (18-101)||(8448949-8449032)
chr4 (18-102)||(15163825-15163907)
chr4 (16-76)||(56198510-56198570)
[»] chr2 (36 HSPs)
chr2 (16-129)||(30926134-30926247)
chr2 (16-129)||(13972299-13972412)
chr2 (16-126)||(22020658-22020768)
chr2 (16-129)||(9185829-9185942)
chr2 (16-129)||(9189058-9189171)
chr2 (16-129)||(25960094-25960207)
chr2 (16-129)||(42369116-42369229)
chr2 (16-129)||(8888222-8888335)
chr2 (16-129)||(24234682-24234795)
chr2 (16-129)||(24237954-24238067)
chr2 (16-129)||(43208295-43208408)
chr2 (18-129)||(30189923-30190034)
chr2 (16-126)||(16791164-16791274)
chr2 (16-126)||(22630432-22630542)
chr2 (16-129)||(5105313-5105426)
chr2 (16-129)||(11348301-11348414)
chr2 (16-129)||(12219382-12219495)
chr2 (16-129)||(27266375-27266488)
chr2 (16-129)||(37280082-37280195)
chr2 (16-129)||(40781059-40781172)
chr2 (16-129)||(43723288-43723401)
chr2 (16-126)||(1386827-1386937)
chr2 (16-126)||(17876416-17876526)
chr2 (34-126)||(16178717-16178809)
chr2 (16-103)||(31427947-31428034)
chr2 (16-103)||(33310279-33310366)
chr2 (16-103)||(45453487-45453574)
chr2 (16-103)||(45456774-45456861)
chr2 (16-129)||(6826359-6826472)
chr2 (35-126)||(3874879-3874970)
chr2 (16-107)||(9966709-9966800)
chr2 (35-126)||(37937643-37937734)
chr2 (16-103)||(38015131-38015218)
chr2 (27-103)||(31430106-31430182)
chr2 (34-131)||(40259562-40259659)
chr2 (55-129)||(31586350-31586424)
[»] chr6 (29 HSPs)
chr6 (16-200)||(11247300-11247481)
chr6 (20-129)||(5259543-5259652)
chr6 (16-129)||(13004795-13004908)
chr6 (16-129)||(11126100-11126213)
chr6 (16-129)||(26942839-26942952)
chr6 (16-129)||(28665668-28665781)
chr6 (16-129)||(30655050-30655163)
chr6 (17-129)||(2378836-2378948)
chr6 (16-114)||(2845923-2846021)
chr6 (19-129)||(6512859-6512969)
chr6 (16-129)||(10289579-10289692)
chr6 (16-129)||(11188320-11188433)
chr6 (16-128)||(3597186-3597298)
chr6 (16-107)||(28108193-28108284)
chr6 (16-126)||(18856429-18856539)
chr6 (17-107)||(28112170-28112260)
chr6 (16-129)||(4512079-4512192)
chr6 (16-129)||(11401863-11401976)
chr6 (17-126)||(24399789-24399898)
chr6 (35-126)||(24409909-24410000)
chr6 (16-103)||(31071937-31072024)
chr6 (16-126)||(28230204-28230314)
chr6 (17-126)||(19475612-19475721)
chr6 (41-126)||(13942173-13942258)
chr6 (16-129)||(20185351-20185464)
chr6 (16-129)||(22150527-22150640)
chr6 (16-129)||(26898273-26898386)
chr6 (55-129)||(15543616-15543690)
chr6 (16-98)||(14281925-14282007)
[»] chr1 (23 HSPs)
chr1 (19-129)||(34066848-34066958)
chr1 (20-126)||(34732767-34732873)
chr1 (17-129)||(11668431-11668543)
chr1 (16-129)||(41058706-41058819)
chr1 (16-126)||(2405119-2405229)
chr1 (16-129)||(20398459-20398572)
chr1 (16-129)||(21018870-21018983)
chr1 (16-129)||(45941022-45941135)
chr1 (16-129)||(28110663-28110776)
chr1 (16-127)||(23022328-23022439)
chr1 (35-129)||(49853501-49853595)
chr1 (19-107)||(7635273-7635361)
chr1 (16-103)||(6071358-6071445)
chr1 (139-204)||(11668605-11668670)
chr1 (34-126)||(3797248-3797340)
chr1 (16-107)||(27332175-27332266)
chr1 (16-103)||(27536690-27536777)
chr1 (16-103)||(31204470-31204557)
chr1 (16-103)||(45961149-45961236)
chr1 (36-129)||(906113-906206)
chr1 (16-101)||(37184268-37184353)
chr1 (16-102)||(21107695-21107781)
chr1 (16-48)||(37907650-37907682)
[»] chr5 (28 HSPs)
chr5 (19-129)||(18239903-18240013)
chr5 (16-129)||(18952298-18952411)
chr5 (16-129)||(33551726-33551839)
chr5 (16-129)||(7270621-7270734)
chr5 (16-129)||(26896008-26896121)
chr5 (16-129)||(41306931-41307044)
chr5 (16-129)||(41877169-41877282)
chr5 (16-129)||(4099926-4100039)
chr5 (16-129)||(26753106-26753219)
chr5 (16-129)||(30065947-30066060)
chr5 (16-129)||(34831368-34831481)
chr5 (16-129)||(40582854-40582967)
chr5 (16-131)||(34143618-34143733)
chr5 (16-126)||(12058896-12059006)
chr5 (16-126)||(17748048-17748158)
chr5 (34-131)||(12087561-12087658)
chr5 (16-121)||(18032071-18032176)
chr5 (16-129)||(23043770-23043883)
chr5 (16-103)||(7624733-7624820)
chr5 (16-107)||(17664179-17664270)
chr5 (16-107)||(20055401-20055492)
chr5 (16-131)||(34133387-34133502)
chr5 (16-102)||(22129897-22129983)
chr5 (16-103)||(14016543-14016630)
chr5 (16-126)||(26907859-26907969)
chr5 (16-129)||(26292396-26292509)
chr5 (55-129)||(2836979-2837053)
chr5 (16-96)||(31575055-31575135)
[»] scaffold0066 (1 HSPs)
scaffold0066 (16-129)||(57994-58107)
[»] scaffold0427 (1 HSPs)
scaffold0427 (16-129)||(4193-4306)
[»] scaffold0024 (1 HSPs)
scaffold0024 (16-126)||(84848-84958)
[»] chr8 (20 HSPs)
chr8 (16-126)||(2560194-2560304)
chr8 (16-129)||(16953378-16953491)
chr8 (28-129)||(21280184-21280285)
chr8 (27-126)||(38248815-38248914)
chr8 (16-129)||(5980717-5980830)
chr8 (16-129)||(12582610-12582723)
chr8 (16-131)||(23620711-23620826)
chr8 (16-126)||(8911252-8911362)
chr8 (16-129)||(5614132-5614245)
chr8 (34-126)||(10498636-10498728)
chr8 (16-103)||(22174328-22174415)
chr8 (16-103)||(36711060-36711147)
chr8 (55-129)||(13196450-13196524)
chr8 (16-126)||(31284275-31284385)
chr8 (16-103)||(18824799-18824886)
chr8 (16-103)||(18826292-18826379)
chr8 (21-107)||(17930605-17930691)
chr8 (16-102)||(7944349-7944435)
chr8 (18-92)||(30784569-30784643)
chr8 (16-96)||(33419291-33419371)
[»] scaffold0250 (1 HSPs)
scaffold0250 (19-126)||(19003-19110)
[»] scaffold0520 (1 HSPs)
scaffold0520 (16-129)||(4384-4497)
[»] scaffold0065 (1 HSPs)
scaffold0065 (16-129)||(59087-59200)
[»] scaffold0038 (1 HSPs)
scaffold0038 (16-126)||(30702-30812)
[»] scaffold0757 (1 HSPs)
scaffold0757 (16-129)||(4957-5070)
[»] scaffold1684 (1 HSPs)
scaffold1684 (16-103)||(45-132)
[»] scaffold0084 (2 HSPs)
scaffold0084 (16-131)||(18898-19013)
scaffold0084 (16-131)||(28968-29083)
[»] scaffold0045 (1 HSPs)
scaffold0045 (16-103)||(89400-89487)
[»] scaffold0191 (1 HSPs)
scaffold0191 (35-129)||(1351-1445)
[»] scaffold0002 (1 HSPs)
scaffold0002 (18-102)||(118853-118937)
[»] scaffold0233 (1 HSPs)
scaffold0233 (16-107)||(9564-9655)
[»] scaffold0056 (1 HSPs)
scaffold0056 (16-127)||(67929-68040)
[»] scaffold0048 (1 HSPs)
scaffold0048 (16-109)||(24446-24539)
[»] scaffold0321 (1 HSPs)
scaffold0321 (34-107)||(3434-3507)
[»] scaffold0126 (1 HSPs)
scaffold0126 (19-76)||(82-139)
[»] scaffold0034 (1 HSPs)
scaffold0034 (19-102)||(48810-48893)
[»] scaffold0009 (2 HSPs)
scaffold0009 (126-200)||(34880-34954)
scaffold0009 (81-110)||(34783-34812)
[»] scaffold0807 (1 HSPs)
scaffold0807 (16-129)||(2477-2590)
[»] scaffold1785 (1 HSPs)
scaffold1785 (58-124)||(905-971)
[»] scaffold0035 (1 HSPs)
scaffold0035 (58-124)||(63515-63581)
[»] scaffold0187 (1 HSPs)
scaffold0187 (16-48)||(31395-31427)


Alignment Details
Target: chr3 (Bit Score: 171; Significance: 6e-92; HSPs: 53)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 171; E-Value: 6e-92
Query Start/End: Original strand, 16 - 222
Target Start/End: Complemental strand, 17544419 - 17544213
Alignment:
Q  16 cagacctaatttctaagagatttaactactcataatcgtgtttacaaataacataatcaatatatgaattaaaacatacatgaactggtaaaaggttgaa 115  Q
    |||||||||||||||||||||||||||||||||||||  ||||||||||| |||||||||||||  ||||||||||||||||||||||||||||||||||    
T  17544419 cagacctaatttctaagagatttaactactcataatcaagtttacaaatagcataatcaatatagaaattaaaacatacatgaactggtaaaaggttgaa 17544320  T
Q  116 aaaatcgccctccttgttttcgaaataagcttcagaataaataggcacagaaaatcgcccaatcatgtcacgattttagtaaatcgtgtaacatcctaat 215  Q
    ||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||| |||||||||||||||||||||||    
T  17544319 aaaatcgccctccttattttcgaaataagcttcagaataaataggtacagaaaatcgcccaatcgtgtcacgatttaagtaaatcgtgtaacatcctaat 17544220  T
Q  216 attttct 222  Q
    |||||||    
T  17544219 attttct 17544213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 16 - 129
Target Start/End: Original strand, 30220400 - 30220513
Alignment:
Q  16 cagacctaatttctaagagatttaactactcataatcgtgtttacaaataacataatcaatatatgaattaaaacatacatgaactggtaaaaggttgaa 115  Q
    |||||||||| ||||||||||||| ||||||||||||| ||||||||||||||||||||||||| |||| |||| |||||||||||| || |||||||||    
T  30220400 cagacctaatatctaagagatttagctactcataatcgagtttacaaataacataatcaatataggaatgaaaatatacatgaactgatagaaggttgaa 30220499  T
Q  116 aaaatcgccctcct 129  Q
     |||||| ||||||    
T  30220500 gaaatcgtcctcct 30220513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 16 - 129
Target Start/End: Original strand, 20729038 - 20729151
Alignment:
Q  16 cagacctaatttctaagagatttaactactcataatcgtgtttacaaataacataatcaatatatgaattaaaacatacatgaactggtaaaaggttgaa 115  Q
    |||||||||| ||||||||||||| ||||||||||| | ||||||||||| |||||||||||   |||| ||||||||||||||||| || |||||||||    
T  20729038 cagacctaatctctaagagatttagctactcataattgagtttacaaatagcataatcaataatggaatcaaaacatacatgaactgatagaaggttgaa 20729137  T
Q  116 aaaatcgccctcct 129  Q
    ||||||||||||||    
T  20729138 aaaatcgccctcct 20729151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 16 - 129
Target Start/End: Complemental strand, 31549059 - 31548946
Alignment:
Q  16 cagacctaatttctaagagatttaactactcataatcgtgtttacaaataacataatcaatatatgaattaaaacatacatgaactggtaaaaggttgaa 115  Q
    |||||||||| ||||||||||||||||||| ||||||| ||||||||||| |||||||||||  ||||| ||||||||||| ||||| ||||||||||||    
T  31549059 cagacctaatctctaagagatttaactacttataatcgagtttacaaatagcataatcaataattgaatcaaaacatacattaactgataaaaggttgaa 31548960  T
Q  116 aaaatcgccctcct 129  Q
     || ||||||||||    
T  31548959 gaattcgccctcct 31548946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 16 - 129
Target Start/End: Complemental strand, 2873367 - 2873254
Alignment:
Q  16 cagacctaatttctaagagatttaactactcataatcgtgtttacaaataacataatcaatatatgaattaaaacatacatgaactggtaaaaggttgaa 115  Q
    |||||||||| ||||||||||||| ||||||||||| | ||||||||||| |||||||||||   |||||||||||||||| ||||| || |||||||||    
T  2873367 cagacctaatctctaagagatttagctactcataattgagtttacaaatagcataatcaatagtggaattaaaacatacataaactgatagaaggttgaa 2873268  T
Q  116 aaaatcgccctcct 129  Q
     |||||||||||||    
T  2873267 gaaatcgccctcct 2873254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 16 - 129
Target Start/End: Complemental strand, 7486373 - 7486260
Alignment:
Q  16 cagacctaatttctaagagatttaactactcataatcgtgtttacaaataacataatcaatatatgaattaaaacatacatgaactggtaaaaggttgaa 115  Q
    |||||||||| ||||||||||||| ||||||||||| | |||||||||||||||||||||||   |||||||||||||||  ||||| || |||||||||    
T  7486373 cagacctaatctctaagagatttagctactcataattgagtttacaaataacataatcaatagcggaattaaaacatacacaaactgatagaaggttgaa 7486274  T
Q  116 aaaatcgccctcct 129  Q
     |||||||||||||    
T  7486273 gaaatcgccctcct 7486260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 16 - 129
Target Start/End: Complemental strand, 11190329 - 11190216
Alignment:
Q  16 cagacctaatttctaagagatttaactactcataatcgtgtttacaaataacataatcaatatatgaattaaaacatacatgaactggtaaaaggttgaa 115  Q
    |||||||||| ||||||||||||| ||||||||||| | ||||||||||| |||||||||||   |||| ||||||||||||||||| || |||||||||    
T  11190329 cagacctaatctctaagagatttagctactcataattgagtttacaaatagcataatcaatagtggaatcaaaacatacatgaactgatagaaggttgaa 11190230  T
Q  116 aaaatcgccctcct 129  Q
     |||||||||||||    
T  11190229 gaaatcgccctcct 11190216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 16 - 129
Target Start/End: Original strand, 19305080 - 19305193
Alignment:
Q  16 cagacctaatttctaagagatttaactactcataatcgtgtttacaaataacataatcaatatatgaattaaaacatacatgaactggtaaaaggttgaa 115  Q
    |||||||||| ||||||||| ||| ||||||||||| | ||||||||||| |||||| ||||  ||||| ||||||||||||||||||||||||||||||    
T  19305080 cagacctaatctctaagagagttagctactcataattgagtttacaaatagcataataaataattgaatcaaaacatacatgaactggtaaaaggttgaa 19305179  T
Q  116 aaaatcgccctcct 129  Q
     |||||| ||||||    
T  19305180 gaaatcgtcctcct 19305193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 16 - 129
Target Start/End: Complemental strand, 25584490 - 25584377
Alignment:
Q  16 cagacctaatttctaagagatttaactactcataatcgtgtttacaaataacataatcaatatatgaattaaaacatacatgaactggtaaaaggttgaa 115  Q
    |||||||||| ||||||||||||| ||||||||||| | ||||||||||| |||||||||||   |||| ||||||||||||||||| || |||||||||    
T  25584490 cagacctaatctctaagagatttagctactcataattgagtttacaaatagcataatcaatagtggaatcaaaacatacatgaactgatagaaggttgaa 25584391  T
Q  116 aaaatcgccctcct 129  Q
     |||||||||||||    
T  25584390 gaaatcgccctcct 25584377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 16 - 127
Target Start/End: Original strand, 19301896 - 19302007
Alignment:
Q  16 cagacctaatttctaagagatttaactactcataatcgtgtttacaaataacataatcaatatatgaattaaaacatacatgaactggtaaaaggttgaa 115  Q
    |||||||||| ||||||||| ||| ||||||||||| | ||||||||||| |||||||||||   |||| |||| |||||||||||||||||||||||||    
T  19301896 cagacctaatctctaagagagttagctactcataattgagtttacaaatagcataatcaatagtggaatcaaaatatacatgaactggtaaaaggttgaa 19301995  T
Q  116 aaaatcgccctc 127  Q
     |||||||||||    
T  19301996 gaaatcgccctc 19302007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 19 - 129
Target Start/End: Original strand, 29344269 - 29344379
Alignment:
Q  19 acctaatttctaagagatttaactactcataatcgtgtttacaaataacataatcaatatatgaattaaaacatacatgaactggtaaaaggttgaaaaa 118  Q
    ||||||| ||||||||||||| ||||||||||| | ||||||||||| |||||||||||   |||| ||||||||||||||||| || ||||||||| ||    
T  29344269 acctaatctctaagagatttagctactcataattgagtttacaaatagcataatcaatagtggaatcaaaacatacatgaactgatagaaggttgaagaa 29344368  T
Q  119 atcgccctcct 129  Q
    |||||||||||    
T  29344369 atcgccctcct 29344379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 19 - 129
Target Start/End: Complemental strand, 41976815 - 41976705
Alignment:
Q  19 acctaatttctaagagatttaactactcataatcgtgtttacaaataacataatcaatatatgaattaaaacatacatgaactggtaaaaggttgaaaaa 118  Q
    ||||||| ||||||||||||| ||||||||||| | ||||||||||| |||||||||||   |||| ||||||||||||||||| || ||||||||| ||    
T  41976815 acctaatctctaagagatttagctactcataattgagtttacaaatagcataatcaatagtggaatcaaaacatacatgaactgatagaaggttgaagaa 41976716  T
Q  119 atcgccctcct 129  Q
    |||||||||||    
T  41976715 atcgccctcct 41976705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 16 - 129
Target Start/End: Complemental strand, 3840319 - 3840206
Alignment:
Q  16 cagacctaatttctaagagatttaactactcataatcgtgtttacaaataacataatcaatatatgaattaaaacatacatgaactggtaaaaggttgaa 115  Q
    |||||||||| ||||||||||||| ||||||||||| |  |||||||||| |||||||||||   |||| ||||||||||||||||| || |||||||||    
T  3840319 cagacctaatctctaagagatttagctactcataattgactttacaaatagcataatcaatagtggaatcaaaacatacatgaactgatagaaggttgaa 3840220  T
Q  116 aaaatcgccctcct 129  Q
     |||||||||||||    
T  3840219 gaaatcgccctcct 3840206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 16 - 129
Target Start/End: Original strand, 17040413 - 17040526
Alignment:
Q  16 cagacctaatttctaagagatttaactactcataatcgtgtttacaaataacataatcaatatatgaattaaaacatacatgaactggtaaaaggttgaa 115  Q
    |||||||||| ||||||||||||||||||||||||||| ||||||||||| |||||||| ||   |||| ||||||||||||||||| || ||| |||||    
T  17040413 cagacctaatctctaagagatttaactactcataatcgagtttacaaatagcataatcagtaatggaatcaaaacatacatgaactgatagaagattgaa 17040512  T
Q  116 aaaatcgccctcct 129  Q
     ||||||| |||||    
T  17040513 gaaatcgctctcct 17040526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 16 - 129
Target Start/End: Complemental strand, 24125302 - 24125189
Alignment:
Q  16 cagacctaatttctaagagatttaactactcataatcgtgtttacaaataacataatcaatatatgaattaaaacatacatgaactggtaaaaggttgaa 115  Q
    |||||||||| ||||||||||||| ||||||||||| | ||||||||||| |||||||||||   |||||||||||||||  ||||| || |||||||||    
T  24125302 cagacctaatctctaagagatttagctactcataattgagtttacaaatagcataatcaatagcggaattaaaacatacacaaactgatagaaggttgaa 24125203  T
Q  116 aaaatcgccctcct 129  Q
     |||||||||||||    
T  24125202 gaaatcgccctcct 24125189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 16 - 129
Target Start/End: Complemental strand, 24128579 - 24128466
Alignment:
Q  16 cagacctaatttctaagagatttaactactcataatcgtgtttacaaataacataatcaatatatgaattaaaacatacatgaactggtaaaaggttgaa 115  Q
    |||||||||| ||||||||||||| ||||||||||| | ||||||||||| |||||||||||   |||||||||||||||  ||||| || |||||||||    
T  24128579 cagacctaatctctaagagatttagctactcataattgagtttacaaatagcataatcaatagcggaattaaaacatacacaaactgatagaaggttgaa 24128480  T
Q  116 aaaatcgccctcct 129  Q
     |||||||||||||    
T  24128479 gaaatcgccctcct 24128466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 16 - 129
Target Start/End: Complemental strand, 45896183 - 45896070
Alignment:
Q  16 cagacctaatttctaagagatttaactactcataatcgtgtttacaaataacataatcaatatatgaattaaaacatacatgaactggtaaaaggttgaa 115  Q
    |||||||||| ||||||||||||| ||||||||||| | ||||||||||| |||||||||||   |||||||||||||||  ||||| || |||||||||    
T  45896183 cagacctaatctctaagagatttagctactcataattgagtttacaaatagcataatcaatagcggaattaaaacatacacaaactgatagaaggttgaa 45896084  T
Q  116 aaaatcgccctcct 129  Q
     |||||||||||||    
T  45896083 gaaatcgccctcct 45896070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 16 - 129
Target Start/End: Original strand, 49743311 - 49743424
Alignment:
Q  16 cagacctaatttctaagagatttaactactcataatcgtgtttacaaataacataatcaatatatgaattaaaacatacatgaactggtaaaaggttgaa 115  Q
    ||||||||||  |||||||||||||||||||||| | | ||||||||||| |||||||||||   |||| ||||||||||||||||| || |||||||||    
T  49743311 cagacctaatccctaagagatttaactactcatatttgagtttacaaatagcataatcaatagtggaatcaaaacatacatgaactgatagaaggttgaa 49743410  T
Q  116 aaaatcgccctcct 129  Q
     |||||||||||||    
T  49743411 gaaatcgccctcct 49743424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 16 - 132
Target Start/End: Original strand, 48064426 - 48064542
Alignment:
Q  16 cagacctaatttctaagagatttaactactcataatcgtgtttacaaataacataatcaatatatgaattaaaacatacatgaactggtaaaaggttgaa 115  Q
    |||||||||  |||||  |||||||||||||||||| |||||||||||||||||||||| || | |||| || |||||||||| ||||||||||  ||||    
T  48064426 cagacctaacctctaatggatttaactactcataatggtgtttacaaataacataatcattagaggaatcaatacatacatgacctggtaaaagagtgaa 48064525  T
Q  116 aaaatcgccctccttgt 132  Q
    ||||||||||| |||||    
T  48064526 aaaatcgcccttcttgt 48064542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 16 - 127
Target Start/End: Complemental strand, 16243676 - 16243566
Alignment:
Q  16 cagacctaatttctaagagatttaactactcataatcgtgtttacaaataacataatcaatatatgaattaaaacatacatgaactggtaaaaggttgaa 115  Q
    ||||||||||||||||||||||||  |||||||||| | ||||||||||| |||||||||| |  |||| ||||||||||||||||| || |||||||||    
T  16243676 cagacctaatttctaagagatttaggtactcataattgagtttacaaatagcataatcaat-tgggaatcaaaacatacatgaactgatagaaggttgaa 16243578  T
Q  116 aaaatcgccctc 127  Q
     |||||||||||    
T  16243577 gaaatcgccctc 16243566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 16 - 129
Target Start/End: Complemental strand, 43926638 - 43926525
Alignment:
Q  16 cagacctaatttctaagagatttaactactcataatcgtgtttacaaataacataatcaatatatgaattaaaacatacatgaactggtaaaaggttgaa 115  Q
    |||||||||| ||||||||||||| ||||||||||| | ||||||||||| |||||||||||   |||| |||||||||| |||| | || |||||||||    
T  43926638 cagacctaatctctaagagatttagctactcataattgagtttacaaatatcataatcaatagtggaatcaaaacatacacgaaccgatagaaggttgaa 43926539  T
Q  116 aaaatcgccctcct 129  Q
     |||||||||||||    
T  43926538 gaaatcgccctcct 43926525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 16 - 129
Target Start/End: Complemental strand, 54723544 - 54723431
Alignment:
Q  16 cagacctaatttctaagagatttaactactcataatcgtgtttacaaataacataatcaatatatgaattaaaacatacatgaactggtaaaaggttgaa 115  Q
    |||||||||| ||||||||||||| ||||||||||| | ||||||||||| |||||||||||   |||| |||||||||| |||| | || |||||||||    
T  54723544 cagacctaatctctaagagatttagctactcataattgagtttacaaatagcataatcaatagtggaatcaaaacatacacgaaccgatagaaggttgaa 54723445  T
Q  116 aaaatcgccctcct 129  Q
     |||||||||||||    
T  54723444 gaaatcgccctcct 54723431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 19 - 115
Target Start/End: Original strand, 32287718 - 32287814
Alignment:
Q  19 acctaatttctaagagatttaactactcataatcgtgtttacaaataacataatcaatatatgaattaaaacatacatgaactggtaaaaggttgaa 115  Q
    ||||||| ||||||||||||| ||||||||||| | ||||||||||| |||||||||||   |||||||||||||||||||||| || |||||||||    
T  32287718 acctaatctctaagagatttagctactcataattgagtttacaaatagcataatcaataatggaattaaaacatacatgaactgatagaaggttgaa 32287814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 16 - 131
Target Start/End: Complemental strand, 10881283 - 10881168
Alignment:
Q  16 cagacctaatttctaagagatttaactactcataatcgtgtttacaaataacataatcaatatatgaattaaaacatacatgaactggtaaaaggttgaa 115  Q
    |||||||||  |||||  |||||| ||||||||||| |||||||||||||||||||||| || | |||| || |||||||||||||||||||||  ||||    
T  10881283 cagacctaacctctaatggatttagctactcataatggtgtttacaaataacataatcattagaggaatcaatacatacatgaactggtaaaagagtgaa 10881184  T
Q  116 aaaatcgccctccttg 131  Q
     |||||||||| ||||    
T  10881183 gaaatcgcccttcttg 10881168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 16 - 131
Target Start/End: Original strand, 22417225 - 22417340
Alignment:
Q  16 cagacctaatttctaagagatttaactactcataatcgtgtttacaaataacataatcaatatatgaattaaaacatacatgaactggtaaaaggttgaa 115  Q
    |||||||||  |||||  |||||| ||||||||||| |||||||||||||||||||||| || | |||| || |||||||||||||||||||||  ||||    
T  22417225 cagacctaacctctaatggatttagctactcataatggtgtttacaaataacataatcattagaggaatcaatacatacatgaactggtaaaagagtgaa 22417324  T
Q  116 aaaatcgccctccttg 131  Q
     |||||||||| ||||    
T  22417325 gaaatcgcccttcttg 22417340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 16 - 126
Target Start/End: Complemental strand, 11784568 - 11784458
Alignment:
Q  16 cagacctaatttctaagagatttaactactcataatcgtgtttacaaataacataatcaatatatgaattaaaacatacatgaactggtaaaaggttgaa 115  Q
    |||||||||  |||||  |||||| ||||||| ||| |||||||||||||||||||||| || | ||||||| |||||||||||||||||||||  ||||    
T  11784568 cagacctaacctctaatggatttagctactcagaatggtgtttacaaataacataatcattagaggaattaatacatacatgaactggtaaaagagtgaa 11784469  T
Q  116 aaaatcgccct 126  Q
     ||||||||||    
T  11784468 gaaatcgccct 11784458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 16 - 126
Target Start/End: Original strand, 12561625 - 12561735
Alignment:
Q  16 cagacctaatttctaagagatttaactactcataatcgtgtttacaaataacataatcaatatatgaattaaaacatacatgaactggtaaaaggttgaa 115  Q
    |||||||||  |||||  |||||| ||||||||||| |||||||||||||||||||||| || | |||| || |||||||||||||||||||||  ||||    
T  12561625 cagacctaacctctaatggatttagctactcataatggtgtttacaaataacataatcattagaggaatcaatacatacatgaactggtaaaagagtgaa 12561724  T
Q  116 aaaatcgccct 126  Q
     ||||||||||    
T  12561725 gaaatcgccct 12561735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 16 - 129
Target Start/End: Complemental strand, 22783395 - 22783282
Alignment:
Q  16 cagacctaatttctaagagatttaactactcataatcgtgtttacaaataacataatcaatatatgaattaaaacatacatgaactggtaaaaggttgaa 115  Q
    |||||||||| ||||||||||||| ||||| ||||| | ||||||||||  ||||||||||  | |||||||||||||||||||||| | ||||| |||     
T  22783395 cagacctaatctctaagagatttagctacttataattgagtttacaaatggcataatcaatggaagaattaaaacatacatgaactgattaaaggatgat 22783296  T
Q  116 aaaatcgccctcct 129  Q
     |||||||||||||    
T  22783295 gaaatcgccctcct 22783282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 16 - 129
Target Start/End: Complemental strand, 22787759 - 22787646
Alignment:
Q  16 cagacctaatttctaagagatttaactactcataatcgtgtttacaaataacataatcaatatatgaattaaaacatacatgaactggtaaaaggttgaa 115  Q
    |||||||||| ||||||||||||| ||||| ||||| | ||||||||||  ||||||||||  | |||||||||||||||||||||| | ||||| |||     
T  22787759 cagacctaatctctaagagatttagctacttataattgagtttacaaatggcataatcaatggaagaattaaaacatacatgaactgattaaaggatgat 22787660  T
Q  116 aaaatcgccctcct 129  Q
     |||||||||||||    
T  22787659 gaaatcgccctcct 22787646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 16 - 121
Target Start/End: Complemental strand, 27091697 - 27091592
Alignment:
Q  16 cagacctaatttctaagagatttaactactcataatcgtgtttacaaataacataatcaatatatgaattaaaacatacatgaactggtaaaaggttgaa 115  Q
    |||||||||| ||||||||||||| ||||||||||| | |||||||||||  ||||||||||   |||| ||||||||||||||||| || |||||||||    
T  27091697 cagacctaatctctaagagatttagctactcataatagagtttacaaatagaataatcaataatggaatcaaaacatacatgaactgatagaaggttgaa 27091598  T
Q  116 aaaatc 121  Q
     |||||    
T  27091597 gaaatc 27091592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 17 - 128
Target Start/End: Original strand, 15195694 - 15195805
Alignment:
Q  17 agacctaatttctaagagatttaactactcataatcgtgtttacaaataacataatcaatatatgaattaaaacatacatgaactggtaaaaggttgaaa 116  Q
    ||||||||  |||||  |||||| ||||||||||| |||||||||| ||||||||||| || | |||| || |||||||||||||||||||| | ||||     
T  15195694 agacctaacctctaatggatttagctactcataatggtgtttacaagtaacataatcattagaggaatcaatacatacatgaactggtaaaacgatgaag 15195793  T
Q  117 aaatcgccctcc 128  Q
    ||||||||||||    
T  15195794 aaatcgccctcc 15195805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 16 - 127
Target Start/End: Complemental strand, 43809382 - 43809271
Alignment:
Q  16 cagacctaatttctaagagatttaactactcataatcgtgtttacaaataacataatcaatatatgaattaaaacatacatgaactggtaaaaggttgaa 115  Q
    |||||||||  |||||  |||||||||||||||||| |||||||||||||| ||||||| || | |||| || |||||||||||||||||||||  ||||    
T  43809382 cagacctaacctctaatggatttaactactcataatggtgtttacaaataatataatcattagaggaatcaatacatacatgaactggtaaaagagtgaa 43809283  T
Q  116 aaaatcgccctc 127  Q
     ||||| |||||    
T  43809282 gaaatcaccctc 43809271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 16 - 126
Target Start/End: Original strand, 25443251 - 25443361
Alignment:
Q  16 cagacctaatttctaagagatttaactactcataatcgtgtttacaaataacataatcaatatatgaattaaaacatacatgaactggtaaaaggttgaa 115  Q
    |||||||||  |||||  |||||| ||||||||||| |||||||||||||||||||||| || | |||| || ||||||||||| |||||||||  ||||    
T  25443251 cagacctaacctctaatggatttagctactcataatggtgtttacaaataacataatcattagaggaatcaatacatacatgaattggtaaaagagtgaa 25443350  T
Q  116 aaaatcgccct 126  Q
     ||||||||||    
T  25443351 gaaatcgccct 25443361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 16 - 126
Target Start/End: Original strand, 32367520 - 32367630
Alignment:
Q  16 cagacctaatttctaagagatttaactactcataatcgtgtttacaaataacataatcaatatatgaattaaaacatacatgaactggtaaaaggttgaa 115  Q
    |||||||||  |||||  |||||| ||||||||||| ||||||||||||||| |||||| || | |||| || |||||||||||||||||||||  ||||    
T  32367520 cagacctaacctctaatggatttagctactcataatggtgtttacaaataacttaatcattagaggaatcaatacatacatgaactggtaaaagagtgaa 32367619  T
Q  116 aaaatcgccct 126  Q
     ||||||||||    
T  32367620 gaaatcgccct 32367630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 16 - 102
Target Start/End: Complemental strand, 35751257 - 35751171
Alignment:
Q  16 cagacctaatttctaagagatttaactactcataatcgtgtttacaaataacataatcaatatatgaattaaaacatacatgaactg 102  Q
    |||||||||| ||||||||||||| ||||||||||| | ||||||||||| ||||||||||  | |||||||||||||||| |||||    
T  35751257 cagacctaatctctaagagatttagctactcataattgagtttacaaatagcataatcaatggaagaattaaaacatacataaactg 35751171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 16 - 129
Target Start/End: Complemental strand, 46884756 - 46884643
Alignment:
Q  16 cagacctaatttctaagagatttaactactcataatcgtgtttacaaataacataatcaatatatgaattaaaacatacatgaactggtaaaaggttgaa 115  Q
    |||||||||  |||||  |||||| ||||||||||| ||||||||||||||| |||||| || | |||| || |||||||||| | ||||||||| ||||    
T  46884756 cagacctaacctctaatggatttagctactcataatggtgtttacaaataacctaatcattagaggaatcaatacatacatgagcaggtaaaaggatgaa 46884657  T
Q  116 aaaatcgccctcct 129  Q
     |||||||||||||    
T  46884656 gaaatcgccctcct 46884643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 34 - 126
Target Start/End: Complemental strand, 54719756 - 54719664
Alignment:
Q  34 gatttaactactcataatcgtgtttacaaataacataatcaatatatgaattaaaacatacatgaactggtaaaaggttgaaaaaatcgccct 126  Q
    |||||| ||||||||||| |||||||||||||||||||||| |  | |||| || |||||||||||||||||||||  |||| ||||||||||    
T  54719756 gatttagctactcataatggtgtttacaaataacataatcattcgaggaatcaatacatacatgaactggtaaaagagtgaagaaatcgccct 54719664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 16 - 115
Target Start/End: Original strand, 28008461 - 28008560
Alignment:
Q  16 cagacctaatttctaagagatttaactactcataatcgtgtttacaaataacataatcaatatatgaattaaaacatacatgaactggtaaaaggttgaa 115  Q
    |||||||||  ||||||||||||| ||||||||||||| ||||||||||  |||||||||||   |||| | ||||||||||||||| || |||||||||    
T  28008461 cagacctaaactctaagagatttagctactcataatcgagtttacaaatggcataatcaataatggaatcataacatacatgaactgatagaaggttgaa 28008560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 27 - 129
Target Start/End: Complemental strand, 2775274 - 2775172
Alignment:
Q  27 tctaagagatttaactactcataatcgtgtttacaaataacataatcaatatatgaattaaaacatacatgaactggtaaaaggttgaaaaaatcgccct 126  Q
    ||||||||||||| ||||||||||| | ||||||||||| |||||||||||   |||| |||||||| | |||| | || ||||||||| ||||||||||    
T  2775274 tctaagagatttagctactcataattgagtttacaaatagcataatcaatagtggaatcaaaacataaacgaaccgatagaaggttgaagaaatcgccct 2775175  T
Q  127 cct 129  Q
    |||    
T  2775174 cct 2775172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 27 - 129
Target Start/End: Complemental strand, 2778517 - 2778415
Alignment:
Q  27 tctaagagatttaactactcataatcgtgtttacaaataacataatcaatatatgaattaaaacatacatgaactggtaaaaggttgaaaaaatcgccct 126  Q
    ||||||||||||| ||||||||||| | ||||||||||| |||||||||||   |||| |||||||| | |||| | || ||||||||| ||||||||||    
T  2778517 tctaagagatttagctactcataattgagtttacaaatagcataatcaatagtggaatcaaaacataaacgaaccgatagaaggttgaagaaatcgccct 2778418  T
Q  127 cct 129  Q
    |||    
T  2778417 cct 2778415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 19 - 121
Target Start/End: Complemental strand, 30690535 - 30690433
Alignment:
Q  19 acctaatttctaagagatttaactactcataatcgtgtttacaaataacataatcaatatatgaattaaaacatacatgaactggtaaaaggttgaaaaa 118  Q
    ||||||| ||||||||||||| ||||||||||| |  |||||||||| |||||||||||   |||| ||||||||||||||||  || ||||||||| ||    
T  30690535 acctaatctctaagagatttagctactcataattgaatttacaaatagcataatcaatagtggaatcaaaacatacatgaactaatagaaggttgaagaa 30690436  T
Q  119 atc 121  Q
    |||    
T  30690435 atc 30690433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 16 - 102
Target Start/End: Complemental strand, 47051298 - 47051212
Alignment:
Q  16 cagacctaatttctaagagatttaactactcataatcgtgtttacaaataacataatcaatatatgaattaaaacatacatgaactg 102  Q
    |||||||||| ||||||||||||| ||||||||||| | ||| ||||||| ||||||||||  | |||||||||||||||| |||||    
T  47051298 cagacctaatctctaagagatttagctactcataattgagttcacaaatagcataatcaatggaagaattaaaacatacataaactg 47051212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 16 - 129
Target Start/End: Original strand, 34984244 - 34984357
Alignment:
Q  16 cagacctaatttctaagagatttaactactcataatcgtgtttacaaataacataatcaatatatgaattaaaacatacatgaactggtaaaaggttgaa 115  Q
    ||||| |||| ||||||||||||| ||||||||||| |  |||||||||| |||||||||||   |||| ||| ||||||||||||| || |||||||||    
T  34984244 cagacttaatatctaagagatttagctactcataattgactttacaaatagcataatcaatagtggaatcaaagcatacatgaactgatagaaggttgaa 34984343  T
Q  116 aaaatcgccctcct 129  Q
     || | ||||||||    
T  34984344 gaagttgccctcct 34984357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 16 - 101
Target Start/End: Complemental strand, 47054728 - 47054643
Alignment:
Q  16 cagacctaatttctaagagatttaactactcataatcgtgtttacaaataacataatcaatatatgaattaaaacatacatgaact 101  Q
    |||||||||| ||||||||||||| ||||||||||| | ||||| ||||| ||||||||||  | |||||||||||||||| ||||    
T  47054728 cagacctaatctctaagagatttagctactcataattgagtttataaatagcataatcaatggaagaattaaaacatacataaact 47054643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 16 - 99
Target Start/End: Complemental strand, 22360249 - 22360166
Alignment:
Q  16 cagacctaatttctaagagatttaactactcataatcgtgtttacaaataacataatcaatatatgaattaaaacatacatgaa 99  Q
    |||||||||| ||||||||||||| ||||||||||| | || |||||||| ||||| ||||  | |||||||||||||||||||    
T  22360249 cagacctaatctctaagagatttagctactcataattgagtatacaaatagcataaacaatggaagaattaaaacatacatgaa 22360166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 16 - 103
Target Start/End: Original strand, 50461940 - 50462027
Alignment:
Q  16 cagacctaatttctaagagatttaactactcataatcgtgtttacaaataacataatcaatatatgaattaaaacatacatgaactgg 103  Q
    |||||||||| ||||||||||||| ||||||||||| | |||||||| || ||||||||||  |  ||||||||||||||| ||||||    
T  50461940 cagacctaatctctaagagatttagctactcataattgagtttacaattagcataatcaatggaaaaattaaaacatacataaactgg 50462027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 19 - 104
Target Start/End: Complemental strand, 18542350 - 18542265
Alignment:
Q  19 acctaatttctaagagatttaactactcataatcgtgtttacaaataacataatcaatatatgaattaaaacatacatgaactggt 104  Q
    ||||||| ||||| ||||||| ||||||||||| |  |||||||||| ||||||||||  | |||||||||||||||| |||||||    
T  18542350 acctaatctctaaaagatttagctactcataattgaatttacaaatagcataatcaatggaagaattaaaacatacataaactggt 18542265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 16 - 77
Target Start/End: Original strand, 52309949 - 52310010
Alignment:
Q  16 cagacctaatttctaagagatttaactactcataatcgtgtttacaaataacataatcaata 77  Q
    |||||||||| ||||||||||||| ||||||||||| | ||||||||||| |||||||||||    
T  52309949 cagacctaatatctaagagatttagctactcataattgagtttacaaatagcataatcaata 52310010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 34 - 126
Target Start/End: Complemental strand, 17141193 - 17141101
Alignment:
Q  34 gatttaactactcataatcgtgtttacaaataacataatcaatatatgaattaaaacatacatgaactggtaaaaggttgaaaaaatcgccct 126  Q
    |||||| ||| ||||||| ||||||||||||||| |||||| || | |||| || ||||||||||||| |||||||  |||| ||||||||||    
T  17141193 gatttagctattcataatggtgtttacaaataacgtaatcattagaggaatcaatacatacatgaactagtaaaagactgaagaaatcgccct 17141101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 16 - 124
Target Start/End: Original strand, 22994089 - 22994196
Alignment:
Q  16 cagacctaatttctaagagatttaactactcataatcgtgtttacaaataacataatcaatatatgaattaaaacatacatgaactggtaaaaggttgaa 115  Q
    |||||||||| ||| ||||||||| ||||||||||| | ||| ||||||| |||| |||||  | |||||||||||||||||||||| ||||  | |||     
T  22994089 cagacctaatctctgagagatttagctactcataattgagtt-acaaatagcatattcaatggaagaattaaaacatacatgaactgataaagagatgat 22994187  T
Q  116 aaaatcgcc 124  Q
    |||||||||    
T  22994188 aaaatcgcc 22994196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 34 - 126
Target Start/End: Complemental strand, 52988190 - 52988098
Alignment:
Q  34 gatttaactactcataatcgtgtttacaaataacataatcaatatatgaattaaaacatacatgaactggtaaaaggttgaaaaaatcgccct 126  Q
    |||||| ||||||||||| | ||||||||||||||||| || || | |||| || |||||||||||||||||||||  |||| ||||| ||||    
T  52988190 gatttagctactcataatggagtttacaaataacataagcattagaggaatcaatacatacatgaactggtaaaagagtgaagaaatctccct 52988098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 16 - 99
Target Start/End: Complemental strand, 22370152 - 22370069
Alignment:
Q  16 cagacctaatttctaagagatttaactactcataatcgtgtttacaaataacataatcaatatatgaattaaaacatacatgaa 99  Q
    |||||||||| ||||||||||||  ||||||||||| | || ||||||||  |||||||||  | ||||||||||||| |||||    
T  22370152 cagacctaatctctaagagattttgctactcataatggagtatacaaatagtataatcaatggaagaattaaaacatatatgaa 22370069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 35 - 96
Target Start/End: Original strand, 3293357 - 3293418
Alignment:
Q  35 atttaactactcataatcgtgtttacaaataacataatcaatatatgaattaaaacatacat 96  Q
    ||||| ||| ||||||| | ||||||||||| ||||||||||  | ||||||||||||||||    
T  3293357 atttagctaatcataattgagtttacaaatagcataatcaatgaaagaattaaaacatacat 3293418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 81; Significance: 3e-38; HSPs: 28)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 16 - 128
Target Start/End: Original strand, 13809922 - 13810034
Alignment:
Q  16 cagacctaatttctaagagatttaactactcataatcgtgtttacaaataacataatcaatatatgaattaaaacatacatgaactggtaaaaggttgaa 115  Q
    |||||||||| ||||||||||||||||||||| ||||| | ||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||    
T  13809922 cagacctaatctctaagagatttaactactcacaatcgaggttacaaatagcataatcaatataagaattaaaacatacatgaactggtaaaaggttgaa 13810021  T
Q  116 aaaatcgccctcc 128  Q
     ||||| ||||||    
T  13810022 gaaatctccctcc 13810034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 16 - 129
Target Start/End: Original strand, 18562942 - 18563055
Alignment:
Q  16 cagacctaatttctaagagatttaactactcataatcgtgtttacaaataacataatcaatatatgaattaaaacatacatgaactggtaaaaggttgaa 115  Q
    |||||||||| ||||||||||||| ||||| ||||||| ||||||||||| ||||||||||||| |||| ||||||||||||||||| ||||||||||||    
T  18562942 cagacctaatctctaagagatttagctacttataatcgagtttacaaatagcataatcaatataggaatcaaaacatacatgaactgataaaaggttgaa 18563041  T
Q  116 aaaatcgccctcct 129  Q
     |||||| ||||||    
T  18563042 gaaatcgtcctcct 18563055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 16 - 129
Target Start/End: Original strand, 23225315 - 23225428
Alignment:
Q  16 cagacctaatttctaagagatttaactactcataatcgtgtttacaaataacataatcaatatatgaattaaaacatacatgaactggtaaaaggttgaa 115  Q
    |||||||||| ||||||||||||||||||||||||| | ||||||||||| |||||||||||   |||| ||||||||||||||||| || |||||||||    
T  23225315 cagacctaatctctaagagatttaactactcataattgagtttacaaatagcataatcaatagtggaatcaaaacatacatgaactgatagaaggttgaa 23225414  T
Q  116 aaaatcgccctcct 129  Q
     |||||||||||||    
T  23225415 gaaatcgccctcct 23225428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 16 - 129
Target Start/End: Original strand, 23234468 - 23234581
Alignment:
Q  16 cagacctaatttctaagagatttaactactcataatcgtgtttacaaataacataatcaatatatgaattaaaacatacatgaactggtaaaaggttgaa 115  Q
    |||||||||| ||||||||||||||||||||||||| | ||||||||||| |||||||||||   |||| ||||||||||||||||| || |||||||||    
T  23234468 cagacctaatctctaagagatttaactactcataattgagtttacaaatagcataatcaatagtggaatcaaaacatacatgaactgatagaaggttgaa 23234567  T
Q  116 aaaatcgccctcct 129  Q
     |||||||||||||    
T  23234568 gaaatcgccctcct 23234581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 16 - 129
Target Start/End: Complemental strand, 20593983 - 20593870
Alignment:
Q  16 cagacctaatttctaagagatttaactactcataatcgtgtttacaaataacataatcaatatatgaattaaaacatacatgaactggtaaaaggttgaa 115  Q
    |||||||||||||||||||||||| || |||||||| | ||||||||||| |||||||||||   |||| ||||||||||||||||| || |||||||||    
T  20593983 cagacctaatttctaagagatttagcttctcataattgagtttacaaatagcataatcaatagtggaatcaaaacatacatgaactgatagaaggttgaa 20593884  T
Q  116 aaaatcgccctcct 129  Q
     |||||||||||||    
T  20593883 gaaatcgccctcct 20593870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 16 - 126
Target Start/End: Complemental strand, 9405962 - 9405852
Alignment:
Q  16 cagacctaatttctaagagatttaactactcataatcgtgtttacaaataacataatcaatatatgaattaaaacatacatgaactggtaaaaggttgaa 115  Q
    |||||||||| ||||||||||||| ||||||||||| | ||||||||||| |||||||||||   |||| ||||||||||||||||| || |||||||||    
T  9405962 cagacctaatctctaagagatttagctactcataattgagtttacaaatagcataatcaatagtggaatcaaaacatacatgaactgatagaaggttgaa 9405863  T
Q  116 aaaatcgccct 126  Q
     ||||||||||    
T  9405862 gaaatcgccct 9405852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 16 - 129
Target Start/End: Original strand, 4596418 - 4596531
Alignment:
Q  16 cagacctaatttctaagagatttaactactcataatcgtgtttacaaataacataatcaatatatgaattaaaacatacatgaactggtaaaaggttgaa 115  Q
    |||||||||| ||||||||||||| |||| |||||| | ||||||||||| |||||||||||   |||| ||||||||||||||||| || |||||||||    
T  4596418 cagacctaatctctaagagatttagctacacataattgagtttacaaatagcataatcaatagtggaatcaaaacatacatgaactgatagaaggttgaa 4596517  T
Q  116 aaaatcgccctcct 129  Q
     |||||||||||||    
T  4596518 gaaatcgccctcct 4596531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 16 - 129
Target Start/End: Complemental strand, 4695229 - 4695116
Alignment:
Q  16 cagacctaatttctaagagatttaactactcataatcgtgtttacaaataacataatcaatatatgaattaaaacatacatgaactggtaaaaggttgaa 115  Q
    |||||||||| ||||| ||||||| ||||||||||||| ||||||||||| |||||||||||   |||| ||||||||||||||||| || |||||||||    
T  4695229 cagacctaatctctaaaagatttagctactcataatcgagtttacaaatagcataatcaataatggaatcaaaacatacatgaactgatagaaggttgaa 4695130  T
Q  116 aaaatcgccctcct 129  Q
     || ||||||||||    
T  4695129 gaattcgccctcct 4695116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 16 - 129
Target Start/End: Original strand, 9865136 - 9865249
Alignment:
Q  16 cagacctaatttctaagagatttaactactcataatcgtgtttacaaataacataatcaatatatgaattaaaacatacatgaactggtaaaaggttgaa 115  Q
    |||||||||| ||||||||||||| ||||||||||| | ||||||||||| |||||||||||   |||| || |||||||||||||| || |||||||||    
T  9865136 cagacctaatctctaagagatttagctactcataattgagtttacaaatagcataatcaatagtggaatcaagacatacatgaactgatagaaggttgaa 9865235  T
Q  116 aaaatcgccctcct 129  Q
     |||||||||||||    
T  9865236 gaaatcgccctcct 9865249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 16 - 129
Target Start/End: Complemental strand, 17730519 - 17730407
Alignment:
Q  16 cagacctaatttctaagagatttaactactcataatcgtgtttacaaataacataatcaatatatgaattaaaacatacatgaactggtaaaaggttgaa 115  Q
    |||||||||| ||||||||||||| ||||||||||| | ||||||||||||||||| |||||   |||| ||||||||||||||||| || |||||||||    
T  17730519 cagacctaatctctaagagatttagctactcataattgagtttacaaataacataa-caatagtggaatcaaaacatacatgaactgatagaaggttgaa 17730421  T
Q  116 aaaatcgccctcct 129  Q
     |||||||||||||    
T  17730420 gaaatcgccctcct 17730407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 16 - 129
Target Start/End: Complemental strand, 10468849 - 10468736
Alignment:
Q  16 cagacctaatttctaagagatttaactactcataatcgtgtttacaaataacataatcaatatatgaattaaaacatacatgaactggtaaaaggttgaa 115  Q
    |||||||||  |||||  |||||| ||||||||||| |||||||||||||||||||||| || | |||| || |||||||||||| ||||||||| ||||    
T  10468849 cagacctaacctctaatggatttagctactcataatggtgtttacaaataacataatcattagaggaatcaatacatacatgaacaggtaaaaggatgaa 10468750  T
Q  116 aaaatcgccctcct 129  Q
     |||||||||||||    
T  10468749 gaaatcgccctcct 10468736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 18 - 107
Target Start/End: Original strand, 14683855 - 14683944
Alignment:
Q  18 gacctaatttctaagagatttaactactcataatcgtgtttacaaataacataatcaatatatgaattaaaacatacatgaactggtaaa 107  Q
    |||||||| ||||||||||||| ||||||||||| | ||||||||||| ||||||||||| | |||||||||||||||| ||||||||||    
T  14683855 gacctaatctctaagagatttagctactcataattgagtttacaaatagcataatcaataaaagaattaaaacatacataaactggtaaa 14683944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 16 - 131
Target Start/End: Original strand, 26144917 - 26145032
Alignment:
Q  16 cagacctaatttctaagagatttaactactcataatcgtgtttacaaataacataatcaatatatgaattaaaacatacatgaactggtaaaaggttgaa 115  Q
    |||||||||  |||||  |||||| ||||||||||| |||||||||||||||||||||| || | |||| || |||||||||||||||||||||  ||||    
T  26144917 cagacctaacctctaatggatttagctactcataatggtgtttacaaataacataatcattagaggaatcaatacatacatgaactggtaaaagagtgaa 26145016  T
Q  116 aaaatcgccctccttg 131  Q
     |||||||||| ||||    
T  26145017 gaaatcgcccttcttg 26145032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 16 - 126
Target Start/End: Original strand, 20081127 - 20081237
Alignment:
Q  16 cagacctaatttctaagagatttaactactcataatcgtgtttacaaataacataatcaatatatgaattaaaacatacatgaactggtaaaaggttgaa 115  Q
    |||||||||  |||||  |||||| ||||||||||| |||||||||||||||||||||| || | |||| || |||||||||||||||||||||  ||||    
T  20081127 cagacctaacctctaatggatttagctactcataatggtgtttacaaataacataatcattagaggaatcaatacatacatgaactggtaaaagagtgaa 20081226  T
Q  116 aaaatcgccct 126  Q
     ||||||||||    
T  20081227 gaaatcgccct 20081237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 34 - 126
Target Start/End: Original strand, 3068404 - 3068496
Alignment:
Q  34 gatttaactactcataatcgtgtttacaaataacataatcaatatatgaattaaaacatacatgaactggtaaaaggttgaaaaaatcgccct 126  Q
    |||||| ||||||||||| |||||||||||||||||||||| || | |||| || |||||||||||||||||||||  |||| ||||||||||    
T  3068404 gatttagctactcataatggtgtttacaaataacataatcattagaggaatcaatacatacatgaactggtaaaagagtgaagaaatcgccct 3068496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 17 - 129
Target Start/End: Complemental strand, 7227231 - 7227119
Alignment:
Q  17 agacctaatttctaagagatttaactactcataatcgtgtttacaaataacataatcaatatatgaattaaaacatacatgaactggtaaaaggttgaaa 116  Q
    ||||||||| ||||||||||||| ||||||||||| | ||||||||||| ||||||||||  | ||||||||||||||||||| || | ||||| |||      
T  7227231 agacctaatctctaagagatttagctactcataattgagtttacaaatagcataatcaatggaggaattaaaacatacatgaaatgattaaaggatgatg 7227132  T
Q  117 aaatcgccctcct 129  Q
    ||||| |||||||    
T  7227131 aaatcaccctcct 7227119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 16 - 103
Target Start/End: Complemental strand, 6603163 - 6603076
Alignment:
Q  16 cagacctaatttctaagagatttaactactcataatcgtgtttacaaataacataatcaatatatgaattaaaacatacatgaactgg 103  Q
    |||||||||| ||||||||||||| ||||||||||| | ||||||||||| ||||||||||  | |||||||||||||||| ||||||    
T  6603163 cagacctaatctctaagagatttagctactcataattgagtttacaaatagcataatcaatggaagaattaaaacatacataaactgg 6603076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 16 - 131
Target Start/End: Original strand, 26136537 - 26136652
Alignment:
Q  16 cagacctaatttctaagagatttaactactcataatcgtgtttacaaataacataatcaatatatgaattaaaacatacatgaactggtaaaaggttgaa 115  Q
    |||||||||  |||||  |||||| ||||||||||| |||||||||||||||||||||| || | |||| || |||||||||||||||||||||  ||||    
T  26136537 cagacctaacctctaatggatttagctactcataatggtgtttacaaataacataatcattagaggaatcaatacatacatgaactggtaaaagagtgaa 26136636  T
Q  116 aaaatcgccctccttg 131  Q
     |||| ||||| ||||    
T  26136637 gaaattgcccttcttg 26136652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 18 - 128
Target Start/End: Original strand, 9273531 - 9273641
Alignment:
Q  18 gacctaatttctaagagatttaactactcataatcgtgtttacaaataacataatcaatatatgaattaaaacatacatgaactggtaaaaggttgaaaa 117  Q
    |||||||| |||||| |||||| | ||||||||| | ||||||||||| |||||||||||   |||| ||||||||||||||| | || ||||||||| |    
T  9273531 gacctaatctctaagggatttagcaactcataattgagtttacaaatagcataatcaatagtggaatcaaaacatacatgaaccgatagaaggttgaaga 9273630  T
Q  118 aatcgccctcc 128  Q
    |||||||||||    
T  9273631 aatcgccctcc 9273641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 16 - 126
Target Start/End: Complemental strand, 10344919 - 10344809
Alignment:
Q  16 cagacctaatttctaagagatttaactactcataatcgtgtttacaaataacataatcaatatatgaattaaaacatacatgaactggtaaaaggttgaa 115  Q
    |||||||||  |||||  |||||| |||||||||||  ||||||||||||||||||||| || | |||| || |||||||||||||||||||||  ||||    
T  10344919 cagacctaacctctaatggatttagctactcataatgttgtttacaaataacataatcattagaggaatcaatacatacatgaactggtaaaagagtgaa 10344820  T
Q  116 aaaatcgccct 126  Q
     ||||||||||    
T  10344819 gaaatcgccct 10344809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 16 - 129
Target Start/End: Original strand, 9133168 - 9133281
Alignment:
Q  16 cagacctaatttctaagagatttaactactcataatcgtgtttacaaataacataatcaatatatgaattaaaacatacatgaactggtaaaaggttgaa 115  Q
    |||||||||| |||||  |||||| ||||||||||| |||||||||||||||||||||| |  | |||| || ||||||||||||  |||||| | ||||    
T  9133168 cagacctaatctctaatggatttagctactcataatggtgtttacaaataacataatcattggaggaatcaatacatacatgaacaagtaaaaagatgaa 9133267  T
Q  116 aaaatcgccctcct 129  Q
     |||||||||||||    
T  9133268 gaaatcgccctcct 9133281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 16 - 96
Target Start/End: Original strand, 11398435 - 11398515
Alignment:
Q  16 cagacctaatttctaagagatttaactactcataatcgtgtttacaaataacataatcaatatatgaattaaaacatacat 96  Q
    |||||||||| ||||||||||||| ||||||||||| | ||||||||||| ||||||||||  | ||||||||||||||||    
T  11398435 cagacctaatctctaagagatttagctactcataattgagtttacaaatagcataatcaatggaagaattaaaacatacat 11398515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 16 - 103
Target Start/End: Complemental strand, 16165453 - 16165366
Alignment:
Q  16 cagacctaatttctaagagatttaactactcataatcgtgtttacaaataacataatcaatatatgaattaaaacatacatgaactgg 103  Q
    |||||||||| ||||||||||||||||||||||||| | ||||||||||| ||||||| ||  | ||||||||| |||||| ||||||    
T  16165453 cagacctaatctctaagagatttaactactcataattgagtttacaaatagcataatcgatgaaagaattaaaagatacataaactgg 16165366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 16 - 126
Target Start/End: Complemental strand, 9080882 - 9080772
Alignment:
Q  16 cagacctaatttctaagagatttaactactcataatcgtgtttacaaataacataatcaatatatgaattaaaacatacatgaactggtaaaaggttgaa 115  Q
    |||||||||  |||||  |||||| ||||||||||| |||||||||||||||||||| | || | |||| || ||||||||||| |||||||||  ||||    
T  9080882 cagacctaacctctaatggatttagctactcataatggtgtttacaaataacataattattagaggaatcaatacatacatgaattggtaaaagagtgaa 9080783  T
Q  116 aaaatcgccct 126  Q
     ||||||||||    
T  9080782 gaaatcgccct 9080772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 16 - 126
Target Start/End: Original strand, 22612016 - 22612126
Alignment:
Q  16 cagacctaatttctaagagatttaactactcataatcgtgtttacaaataacataatcaatatatgaattaaaacatacatgaactggtaaaaggttgaa 115  Q
    ||||||||| ||||||  |||||| ||||||||||| |||||||||||||||||||||| || | || | || |||| |||||| |||||||||  ||||    
T  22612016 cagacctaacttctaatggatttagctactcataatggtgtttacaaataacataatcattagaggattcaatacatgcatgaattggtaaaagagtgaa 22612115  T
Q  116 aaaatcgccct 126  Q
     ||||||||||    
T  22612116 gaaatcgccct 22612126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 16 - 103
Target Start/End: Complemental strand, 13842345 - 13842258
Alignment:
Q  16 cagacctaatttctaagagatttaactactcataatcgtgtttacaaataacataatcaatatatgaattaaaacatacatgaactgg 103  Q
    |||||||||| ||||| ||||||| |||| |||||| | ||||||||||| ||||||||||  | |||||||||||||||| ||||||    
T  13842345 cagacctaatctctaatagatttagctacgcataattgagtttacaaatagcataatcaatggaagaattaaaacatacataaactgg 13842258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 16 - 103
Target Start/End: Complemental strand, 48645179 - 48645092
Alignment:
Q  16 cagacctaatttctaagagatttaactactcataatcgtgtttacaaataacataatcaatatatgaattaaaacatacatgaactgg 103  Q
    |||||||||| ||||||||||||| |||| |||||| | ||||||| ||| ||||||||||  | |||||||||||||||| ||||||    
T  48645179 cagacctaatctctaagagatttagctacgcataattgagtttacatatagcataatcaatggaagaattaaaacatacataaactgg 48645092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 16 - 126
Target Start/End: Original strand, 37166556 - 37166666
Alignment:
Q  16 cagacctaatttctaagagatttaactactcataatcgtgtttacaaataacataatcaatatatgaattaaaacatacatgaactggtaaaaggttgaa 115  Q
    |||||||||  |||||  |||||| |||||||||||  |||||||||||| |||||||| || | |||| || ||||||||||| |||||||||  ||||    
T  37166556 cagacctaacctctaatggatttagctactcataatgatgtttacaaatatcataatcattagaggaatcaatacatacatgaattggtaaaagagtgaa 37166655  T
Q  116 aaaatcgccct 126  Q
     ||||||||||    
T  37166656 gaaatcgccct 37166666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 81; Significance: 3e-38; HSPs: 43)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 17 - 129
Target Start/End: Complemental strand, 53094223 - 53094111
Alignment:
Q  17 agacctaatttctaagagatttaactactcataatcgtgtttacaaataacataatcaatatatgaattaaaacatacatgaactggtaaaaggttgaaa 116  Q
    ||||||||| ||||||||||||| ||||||||||||| ||||||||||| ||||||||||||| |||||||||||||||||||||| || |||||||||     
T  53094223 agacctaatctctaagagatttagctactcataatcgagtttacaaatagcataatcaatataggaattaaaacatacatgaactgatagaaggttgaag 53094124  T
Q  117 aaatcgccctcct 129  Q
    |||||||||||||    
T  53094123 aaatcgccctcct 53094111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 16 - 121
Target Start/End: Original strand, 8875166 - 8875271
Alignment:
Q  16 cagacctaatttctaagagatttaactactcataatcgtgtttacaaataacataatcaatatatgaattaaaacatacatgaactggtaaaaggttgaa 115  Q
    |||||||||| ||||||||||||||||||||| ||||| ||||||||||||||||||||||||| |||||||||||||||||||||  || |||||||||    
T  8875166 cagacctaatctctaagagatttaactactcacaatcgagtttacaaataacataatcaatataggaattaaaacatacatgaactaatagaaggttgaa 8875265  T
Q  116 aaaatc 121  Q
     |||||    
T  8875266 gaaatc 8875271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 16 - 129
Target Start/End: Complemental strand, 19820445 - 19820332
Alignment:
Q  16 cagacctaatttctaagagatttaactactcataatcgtgtttacaaataacataatcaatatatgaattaaaacatacatgaactggtaaaaggttgaa 115  Q
    |||||||||| ||||||||||||| ||||||||||| | ||||||||||| |||||||||||   |||| ||||||||||||||||| ||||||||||||    
T  19820445 cagacctaatctctaagagatttagctactcataattgagtttacaaatagcataatcaatagtggaatcaaaacatacatgaactgataaaaggttgaa 19820346  T
Q  116 aaaatcgccctcct 129  Q
     |||||||||||||    
T  19820345 gaaatcgccctcct 19820332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 16 - 129
Target Start/End: Complemental strand, 19827207 - 19827094
Alignment:
Q  16 cagacctaatttctaagagatttaactactcataatcgtgtttacaaataacataatcaatatatgaattaaaacatacatgaactggtaaaaggttgaa 115  Q
    |||||||||| ||||||||||||| ||||||||||| | ||||||||||| |||||||||||   |||| ||||||||||||||||| ||||||||||||    
T  19827207 cagacctaatctctaagagatttagctactcataattgagtttacaaatagcataatcaatagtggaatcaaaacatacatgaactgataaaaggttgaa 19827108  T
Q  116 aaaatcgccctcct 129  Q
     |||||||||||||    
T  19827107 gaaatcgccctcct 19827094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 16 - 129
Target Start/End: Original strand, 8877906 - 8878019
Alignment:
Q  16 cagacctaatttctaagagatttaactactcataatcgtgtttacaaataacataatcaatatatgaattaaaacatacatgaactggtaaaaggttgaa 115  Q
    |||||||||| ||||||||||||| |||||||||| || ||||||||||| ||||||||||||| ||||||||||| |||| ||||  || |||||||||    
T  8877906 cagacctaatctctaagagatttagctactcataaacgagtttacaaatagcataatcaatataggaattaaaacaaacattaacttatagaaggttgaa 8878005  T
Q  116 aaaatcgccctcct 129  Q
     |||||||||||||    
T  8878006 gaaatcgccctcct 8878019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 16 - 129
Target Start/End: Complemental strand, 24150389 - 24150276
Alignment:
Q  16 cagacctaatttctaagagatttaactactcataatcgtgtttacaaataacataatcaatatatgaattaaaacatacatgaactggtaaaaggttgaa 115  Q
    |||||||||| ||||||||||||| ||||||||||| | ||||||||||| |||||||||||   |||||||||||||||| ||||| || |||||||||    
T  24150389 cagacctaatctctaagagatttagctactcataattgagtttacaaatagcataatcaatagtggaattaaaacatacataaactgatagaaggttgaa 24150290  T
Q  116 aaaatcgccctcct 129  Q
     |||||||||||||    
T  24150289 gaaatcgccctcct 24150276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 16 - 129
Target Start/End: Complemental strand, 39501365 - 39501252
Alignment:
Q  16 cagacctaatttctaagagatttaactactcataatcgtgtttacaaataacataatcaatatatgaattaaaacatacatgaactggtaaaaggttgaa 115  Q
    |||||||||| ||||||||||||| ||||||||||| | ||||||||||| |||||||||||   |||| ||||||||||||||||| || |||||||||    
T  39501365 cagacctaatctctaagagatttagctactcataattgagtttacaaatagcataatcaatagtggaatcaaaacatacatgaactgatagaaggttgaa 39501266  T
Q  116 aaaatcgccctcct 129  Q
     |||||||||||||    
T  39501265 gaaatcgccctcct 39501252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 16 - 129
Target Start/End: Original strand, 48415934 - 48416047
Alignment:
Q  16 cagacctaatttctaagagatttaactactcataatcgtgtttacaaataacataatcaatatatgaattaaaacatacatgaactggtaaaaggttgaa 115  Q
    |||||||||| ||||||||||||| ||||||||| | | |||||||||||||||||||||||   |||| ||||||||||||||||| || |||||||||    
T  48415934 cagacctaatctctaagagatttagctactcatatttgagtttacaaataacataatcaatagtggaatcaaaacatacatgaactgatagaaggttgaa 48416033  T
Q  116 aaaatcgccctcct 129  Q
     |||||||||||||    
T  48416034 gaaatcgccctcct 48416047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 16 - 129
Target Start/End: Original strand, 52006935 - 52007048
Alignment:
Q  16 cagacctaatttctaagagatttaactactcataatcgtgtttacaaataacataatcaatatatgaattaaaacatacatgaactggtaaaaggttgaa 115  Q
    |||||||||| ||||||||||||| ||||||||||| | ||||||||||| |||||||||||   |||| ||||||||||||||||| || |||||||||    
T  52006935 cagacctaatctctaagagatttagctactcataattgagtttacaaatagcataatcaatagtggaatcaaaacatacatgaactgatagaaggttgaa 52007034  T
Q  116 aaaatcgccctcct 129  Q
     |||||||||||||    
T  52007035 gaaatcgccctcct 52007048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 16 - 129
Target Start/End: Original strand, 52531340 - 52531453
Alignment:
Q  16 cagacctaatttctaagagatttaactactcataatcgtgtttacaaataacataatcaatatatgaattaaaacatacatgaactggtaaaaggttgaa 115  Q
    |||||||||| ||||||||||||| ||||||||||| | ||||||||||| |||||||||||   |||||||||||||||| ||||| || |||||||||    
T  52531340 cagacctaatctctaagagatttagctactcataattgagtttacaaatagcataatcaatagtggaattaaaacatacataaactgatagaaggttgaa 52531439  T
Q  116 aaaatcgccctcct 129  Q
     |||||||||||||    
T  52531440 gaaatcgccctcct 52531453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 16 - 129
Target Start/End: Original strand, 27691548 - 27691661
Alignment:
Q  16 cagacctaatttctaagagatttaactactcataatcgtgtttacaaataacataatcaatatatgaattaaaacatacatgaactggtaaaaggttgaa 115  Q
    |||||||||| ||||||||||||| ||||||||||| | ||||||||||| |||||||||||   |||| ||||||||||||||||| || || ||||||    
T  27691548 cagacctaatctctaagagatttagctactcataattgagtttacaaatagcataatcaatagtggaatcaaaacatacatgaactgatagaatgttgaa 27691647  T
Q  116 aaaatcgccctcct 129  Q
     |||||||||||||    
T  27691648 gaaatcgccctcct 27691661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 16 - 129
Target Start/End: Complemental strand, 40794719 - 40794606
Alignment:
Q  16 cagacctaatttctaagagatttaactactcataatcgtgtttacaaataacataatcaatatatgaattaaaacatacatgaactggtaaaaggttgaa 115  Q
    |||||||||| || |||||||||||||||||||| ||| ||||||||||| |||||||||||   |||| ||||||||||||||||| || |||||||||    
T  40794719 cagacctaatctcgaagagatttaactactcatactcgagtttacaaatagcataatcaataatggaatcaaaacatacatgaactgatagaaggttgaa 40794620  T
Q  116 aaaatcgccctcct 129  Q
     || ||||||||||    
T  40794619 gaattcgccctcct 40794606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 16 - 129
Target Start/End: Original strand, 40903488 - 40903601
Alignment:
Q  16 cagacctaatttctaagagatttaactactcataatcgtgtttacaaataacataatcaatatatgaattaaaacatacatgaactggtaaaaggttgaa 115  Q
    |||||||||| ||||||||||||| ||||||||||| | ||||||||||| |||||||||||   |||| |||||||||||||| || || |||||||||    
T  40903488 cagacctaatctctaagagatttagctactcataattgagtttacaaatagcataatcaatagtggaatcaaaacatacatgaaatgatagaaggttgaa 40903587  T
Q  116 aaaatcgccctcct 129  Q
     |||||||||||||    
T  40903588 gaaatcgccctcct 40903601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 16 - 129
Target Start/End: Complemental strand, 48637222 - 48637109
Alignment:
Q  16 cagacctaatttctaagagatttaactactcataatcgtgtttacaaataacataatcaatatatgaattaaaacatacatgaactggtaaaaggttgaa 115  Q
    |||||||||| ||||||||||||| ||||||||||| | ||||||||||| |||||||||||   |||||||||||||||| ||||| || |||||||||    
T  48637222 cagacctaatctctaagagatttagctactcataattgagtttacaaatagcataatcaatagtggaattaaaacatacataaactgatagaaggttgaa 48637123  T
Q  116 aaaatcgccctcct 129  Q
     ||||| |||||||    
T  48637122 gaaatcaccctcct 48637109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 16 - 122
Target Start/End: Original strand, 27677459 - 27677565
Alignment:
Q  16 cagacctaatttctaagagatttaactactcataatcgtgtttacaaataacataatcaatatatgaattaaaacatacatgaactggtaaaaggttgaa 115  Q
    |||||||||| ||||||||||||| ||||||||||| | ||||||||||| |||||||||||   |||| ||||||||||||||||| || |||||||||    
T  27677459 cagacctaatctctaagagatttagctactcataattgagtttacaaatagcataatcaatagtggaatcaaaacatacatgaactgatagaaggttgaa 27677558  T
Q  116 aaaatcg 122  Q
     ||||||    
T  27677559 gaaatcg 27677565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 16 - 129
Target Start/End: Original strand, 34018185 - 34018298
Alignment:
Q  16 cagacctaatttctaagagatttaactactcataatcgtgtttacaaataacataatcaatatatgaattaaaacatacatgaactggtaaaaggttgaa 115  Q
    |||||||||| ||||||||||||| ||||||||||| | ||||||||||| |||||||||||   |||| |||||||||| |||| | || |||||||||    
T  34018185 cagacctaatctctaagagatttagctactcataattgagtttacaaatagcataatcaatagtggaatcaaaacatacacgaaccgatagaaggttgaa 34018284  T
Q  116 aaaatcgccctcct 129  Q
     |||||||||||||    
T  34018285 gaaatcgccctcct 34018298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 16 - 109
Target Start/End: Complemental strand, 44164500 - 44164407
Alignment:
Q  16 cagacctaatttctaagagatttaactactcataatcgtgtttacaaataacataatcaatatatgaattaaaacatacatgaactggtaaaag 109  Q
    |||||||||| ||||||||||||| ||||||||||| | ||||||||||| |||||||||||   |||| ||||||||||||||||||||||||    
T  44164500 cagacctaatctctaagagatttagctactcataattgagtttacaaatagcataatcaatagtggaatcaaaacatacatgaactggtaaaag 44164407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 16 - 131
Target Start/End: Original strand, 18673475 - 18673590
Alignment:
Q  16 cagacctaatttctaagagatttaactactcataatcgtgtttacaaataacataatcaatatatgaattaaaacatacatgaactggtaaaaggttgaa 115  Q
    |||||||||  |||||  |||||| ||||||||||| |||||||||||||||||||||| || | |||| || |||||||||||||||||||||  ||||    
T  18673475 cagacctaacctctaatggatttagctactcataatggtgtttacaaataacataatcattagaggaatcaatacatacatgaactggtaaaagagtgaa 18673574  T
Q  116 aaaatcgccctccttg 131  Q
     |||||||||| ||||    
T  18673575 gaaatcgcccttcttg 18673590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 16 - 131
Target Start/End: Complemental strand, 25961775 - 25961660
Alignment:
Q  16 cagacctaatttctaagagatttaactactcataatcgtgtttacaaataacataatcaatatatgaattaaaacatacatgaactggtaaaaggttgaa 115  Q
    |||||||||  |||||  |||||| ||||||||||| |||||||||||||||||||||| |||| |||| || |||||||||||||||||||||  ||||    
T  25961775 cagacctaacctctaatggatttagctactcataatggtgtttacaaataacataatcattataggaatcaatacatacatgaactggtaaaagagtgaa 25961676  T
Q  116 aaaatcgccctccttg 131  Q
     ||||| |||| ||||    
T  25961675 gaaatctcccttcttg 25961660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 16 - 129
Target Start/End: Original strand, 15436874 - 15436985
Alignment:
Q  16 cagacctaatttctaagagatttaactactcataatcgtgtttacaaataacataatcaatatatgaattaaaacatacatgaactggtaaaaggttgaa 115  Q
    |||||||||| ||||||||||||| |||||||||||   ||||||||||| |||||||||||   |||| |||||||||||||||||  | |||||||||    
T  15436874 cagacctaatctctaagagatttagctactcataattcagtttacaaatagcataatcaatagtggaatcaaaacatacatgaactg--ataaggttgaa 15436971  T
Q  116 aaaatcgccctcct 129  Q
     |||||||||||||    
T  15436972 gaaatcgccctcct 15436985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 16 - 129
Target Start/End: Complemental strand, 12782622 - 12782509
Alignment:
Q  16 cagacctaatttctaagagatttaactactcataatcgtgtttacaaataacataatcaatatatgaattaaaacatacatgaactggtaaaaggttgaa 115  Q
    |||||||||  ||||||||||||| ||||||||||| | ||||||||||| |||||||||||   |||| ||||||| |||||| || || |||||||||    
T  12782622 cagacctaacctctaagagatttagctactcataattgagtttacaaatagcataatcaatagtggaatcaaaacattcatgaaatgatagaaggttgaa 12782523  T
Q  116 aaaatcgccctcct 129  Q
     |||||||||||||    
T  12782522 gaaatcgccctcct 12782509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 16 - 129
Target Start/End: Original strand, 24044545 - 24044658
Alignment:
Q  16 cagacctaatttctaagagatttaactactcataatcgtgtttacaaataacataatcaatatatgaattaaaacatacatgaactggtaaaaggttgaa 115  Q
    |||||||||  ||||||||||||| ||| ||||||| | ||||||||||| |||||| ||||   |||| ||||||||||||||||| || |||||||||    
T  24044545 cagacctaacctctaagagatttagctaatcataattgagtttacaaatagcataattaataatggaatcaaaacatacatgaactgatagaaggttgaa 24044644  T
Q  116 aaaatcgccctcct 129  Q
     |||||||||||||    
T  24044645 gaaatcgccctcct 24044658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 16 - 129
Target Start/End: Original strand, 38283893 - 38284006
Alignment:
Q  16 cagacctaatttctaagagatttaactactcataatcgtgtttacaaataacataatcaatatatgaattaaaacatacatgaactggtaaaaggttgaa 115  Q
    |||||||||| ||||||||||||| ||||||||||| | ||||||||||| |||||||| ||   |||| ||||||||||||| ||| || |||||||||    
T  38283893 cagacctaatctctaagagatttagctactcataattgagtttacaaatagcataatcattagtggaatcaaaacatacatgatctgatagaaggttgaa 38283992  T
Q  116 aaaatcgccctcct 129  Q
     |||| ||||||||    
T  38283993 gaaattgccctcct 38284006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 16 - 103
Target Start/End: Original strand, 15405489 - 15405576
Alignment:
Q  16 cagacctaatttctaagagatttaactactcataatcgtgtttacaaataacataatcaatatatgaattaaaacatacatgaactgg 103  Q
    |||||||||| ||||||||||||| ||||||||||| | ||||||||||| ||||||||||  | |||||||||||||||| ||||||    
T  15405489 cagacctaatctctaagagatttagctactcataattgagtttacaaatagcataatcaatggaagaattaaaacatacataaactgg 15405576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 16 - 103
Target Start/End: Complemental strand, 56195244 - 56195157
Alignment:
Q  16 cagacctaatttctaagagatttaactactcataatcgtgtttacaaataacataatcaatatatgaattaaaacatacatgaactgg 103  Q
    |||||||||| ||||||||||||| ||||||||||| | ||||||||||| ||||||||||  | |||||||||||||||| ||||||    
T  56195244 cagacctaatctctaagagatttagctactcataattgagtttacaaatagcataatcaatggaagaattaaaacatacataaactgg 56195157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 20 - 129
Target Start/End: Original strand, 15430264 - 15430371
Alignment:
Q  20 cctaatttctaagagatttaactactcataatcgtgtttacaaataacataatcaatatatgaattaaaacatacatgaactggtaaaaggttgaaaaaa 119  Q
    |||||| ||||||||||||| |||||||||||   ||||||||||| |||||||||||   |||| |||||||||||||||||  | ||||||||| |||    
T  15430264 cctaatctctaagagatttagctactcataattcagtttacaaatagcataatcaatagtggaatcaaaacatacatgaactg--ataaggttgaagaaa 15430361  T
Q  120 tcgccctcct 129  Q
    ||||||||||    
T  15430362 tcgccctcct 15430371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 35 - 124
Target Start/End: Complemental strand, 21419486 - 21419397
Alignment:
Q  35 atttaactactcataatcgtgtttacaaataacataatcaatatatgaattaaaacatacatgaactggtaaaaggttgaaaaaatcgcc 124  Q
    ||||| ||||||||||| |||||||||||||||||||||| || | |||| || |||||||||||||||||||||  |||| ||||||||    
T  21419486 atttagctactcataatggtgtttacaaataacataatcattagaggaatcaatacatacatgaactggtaaaagagtgaagaaatcgcc 21419397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 16 - 128
Target Start/End: Complemental strand, 3718841 - 3718729
Alignment:
Q  16 cagacctaatttctaagagatttaactactcataatcgtgtttacaaataacataatcaatatatgaattaaaacatacatgaactggtaaaaggttgaa 115  Q
    |||||||||| | ||||||||||| ||| ||||||| | ||||||||||| |||||||||||   |||| |||||||||||||| || || |||||||||    
T  3718841 cagacctaatctttaagagatttagctattcataattgagtttacaaatagcataatcaatagtggaatcaaaacatacatgaattgatagaaggttgaa 3718742  T
Q  116 aaaatcgccctcc 128  Q
     ||||| ||||||    
T  3718741 gaaatctccctcc 3718729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 34 - 122
Target Start/End: Complemental strand, 30392272 - 30392184
Alignment:
Q  34 gatttaactactcataatcgtgtttacaaataacataatcaatatatgaattaaaacatacatgaactggtaaaaggttgaaaaaatcg 122  Q
    |||||| ||||||||||| |||||||||||||||||||||| || | |||| || |||||||||||| ||||||||| |||| ||||||    
T  30392272 gatttagctactcataatggtgtttacaaataacataatcattagaggaatcaatacatacatgaacaggtaaaaggatgaagaaatcg 30392184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 34 - 126
Target Start/End: Original strand, 53009980 - 53010072
Alignment:
Q  34 gatttaactactcataatcgtgtttacaaataacataatcaatatatgaattaaaacatacatgaactggtaaaaggttgaaaaaatcgccct 126  Q
    |||||| ||||||||||| |||||||||||||||||||||| || | | || || |||||||||||||||||||||  |||| ||||||||||    
T  53009980 gatttagctactcataatggtgtttacaaataacataatcattagagggatcaatacatacatgaactggtaaaagagtgaagaaatcgccct 53010072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 16 - 103
Target Start/End: Complemental strand, 29324542 - 29324455
Alignment:
Q  16 cagacctaatttctaagagatttaactactcataatcgtgtttacaaataacataatcaatatatgaattaaaacatacatgaactgg 103  Q
    |||||||||| ||||||||||||| ||||||||||| | ||||||||||| ||||||||||  |  ||||||||||||||| ||||||    
T  29324542 cagacctaatctctaagagatttagctactcataattgagtttacaaatagcataatcaatggaaaaattaaaacatacataaactgg 29324455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 34 - 129
Target Start/End: Original strand, 29545296 - 29545391
Alignment:
Q  34 gatttaactactcataatcgtgtttacaaataacataatcaatatatgaattaaaacatacatgaactggtaaaaggttgaaaaaatcgccctcct 129  Q
    |||||| ||||||||||| |||||||||||||||||||||| || | |||| || |||||||||||  ||||||||| | || |||||||||||||    
T  29545296 gatttagctactcataatggtgtttacaaataacataatcattagaggaatcaatacatacatgaataggtaaaaggataaagaaatcgccctcct 29545391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 16 - 103
Target Start/End: Original strand, 34320322 - 34320409
Alignment:
Q  16 cagacctaatttctaagagatttaactactcataatcgtgtttacaaataacataatcaatatatgaattaaaacatacatgaactgg 103  Q
    |||||||||| ||||||||||||| ||||||||||| | ||||||||||| ||||||||||  |  ||||||||||||||| ||||||    
T  34320322 cagacctaatctctaagagatttagctactcataattgagtttacaaatagcataatcaatggaaaaattaaaacatacataaactgg 34320409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 16 - 103
Target Start/End: Original strand, 46955883 - 46955970
Alignment:
Q  16 cagacctaatttctaagagatttaactactcataatcgtgtttacaaataacataatcaatatatgaattaaaacatacatgaactgg 103  Q
    |||||||||| | ||||||||||| ||||||||||| | ||||||||||| ||||||||||  | |||||||||||||||| ||||||    
T  46955883 cagacctaatctttaagagatttagctactcataattgagtttacaaatagcataatcaatggaagaattaaaacatacataaactgg 46955970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 16 - 101
Target Start/End: Original strand, 48014452 - 48014537
Alignment:
Q  16 cagacctaatttctaagagatttaactactcataatcgtgtttacaaataacataatcaatatatgaattaaaacatacatgaact 101  Q
    |||||| ||| ||||||||||||| ||||||||||| | ||||||||||||||||||||||  | ||||||||| ||| |||||||    
T  48014452 cagacccaatctctaagagatttagctactcataattgagtttacaaataacataatcaatggaagaattaaaagatatatgaact 48014537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 16 - 103
Target Start/End: Complemental strand, 33926684 - 33926597
Alignment:
Q  16 cagacctaatttctaagagatttaactactcataatcgtgtttacaaataacataatcaatatatgaattaaaacatacatgaactgg 103  Q
    |||||||||| |||||||||||||  |||||||||| | |||||||||||  |||||||||  | |||||||||||||||| ||||||    
T  33926684 cagacctaatctctaagagatttagttactcataattgagtttacaaatagtataatcaatgaaagaattaaaacatacataaactgg 33926597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 35 - 126
Target Start/End: Complemental strand, 35509663 - 35509572
Alignment:
Q  35 atttaactactcataatcgtgtttacaaataacataatcaatatatgaattaaaacatacatgaactggtaaaaggttgaaaaaatcgccct 126  Q
    ||||| ||||||||||| |||||||||||||||||||||| || | | || || ||||||||||||| |||||||  |||| ||||||||||    
T  35509663 atttagctactcataatggtgtttacaaataacataatcattagagggatcaatacatacatgaactagtaaaagagtgaataaatcgccct 35509572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 41 - 124
Target Start/End: Original strand, 40493796 - 40493879
Alignment:
Q  41 ctactcataatcgtgtttacaaataacataatcaatatatgaattaaaacatacatgaactggtaaaaggttgaaaaaatcgcc 124  Q
    ||||||||||| |||||||||||||||||||||| || | |||| || ||||||||||||||||| |||  |||| ||||||||    
T  40493796 ctactcataatggtgtttacaaataacataatcattagaggaatcaatacatacatgaactggtataagagtgaagaaatcgcc 40493879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 16 - 103
Target Start/End: Original strand, 44809360 - 44809447
Alignment:
Q  16 cagacctaatttctaagagatttaactactcataatcgtgtttacaaataacataatcaatatatgaattaaaacatacatgaactgg 103  Q
    |||||||||| ||||||||||||| ||||||||||| | ||||||||||| ||||| ||||  |  ||||||||||||||| ||||||    
T  44809360 cagacctaatctctaagagatttagctactcataattgagtttacaaatagcataaccaatggaaaaattaaaacatacataaactgg 44809447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 16 - 129
Target Start/End: Complemental strand, 11195392 - 11195279
Alignment:
Q  16 cagacctaatttctaagagatttaactactcataatcgtgtttacaaataacataatcaatatatgaattaaaacatacatgaactggtaaaaggttgaa 115  Q
    |||||||||  |||||  |||||| ||||||||||| |||||||||||||||||||||| || | |||| || |||||||| |||  |||||||| ||||    
T  11195392 cagacctaacgtctaatggatttagctactcataatggtgtttacaaataacataatcattagaggaatcaatacatacattaacatgtaaaaggatgaa 11195293  T
Q  116 aaaatcgccctcct 129  Q
     || |||| |||||    
T  11195292 gaactcgctctcct 11195279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 18 - 101
Target Start/End: Original strand, 8448949 - 8449032
Alignment:
Q  18 gacctaatttctaagagatttaactactcataatcgtgtttacaaataacataatcaatatatgaattaaaacatacatgaact 101  Q
    |||||||| |||||||||||||  |||||||||| | ||||||||||| |||||| |||  |  ||||||||||||||||||||    
T  8448949 gacctaatctctaagagatttagttactcataattgagtttacaaatagcataataaatgaaataattaaaacatacatgaact 8449032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 18 - 102
Target Start/End: Complemental strand, 15163907 - 15163825
Alignment:
Q  18 gacctaatttctaagagatttaactactcataatcgtgtttacaaataacataatcaatatatgaattaaaacatacatgaactg 102  Q
    |||||||| ||||||||||||| ||||||||||||  ||||||||||| ||||||  ||  |  |||||||||||||||||||||    
T  15163907 gacctaatctctaagagatttagctactcataatcaagtttacaaatagcataat--atgaaataattaaaacatacatgaactg 15163825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 16 - 76
Target Start/End: Complemental strand, 56198570 - 56198510
Alignment:
Q  16 cagacctaatttctaagagatttaactactcataatcgtgtttacaaataacataatcaat 76  Q
    |||| ||||| ||||||||||||| ||||||||||| | ||||||||||| ||||||||||    
T  56198570 cagatctaatctctaagagatttagctactcataattgagtttacaaatagcataatcaat 56198510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 78; Significance: 2e-36; HSPs: 36)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 16 - 129
Target Start/End: Complemental strand, 30926247 - 30926134
Alignment:
Q  16 cagacctaatttctaagagatttaactactcataatcgtgtttacaaataacataatcaatatatgaattaaaacatacatgaactggtaaaaggttgaa 115  Q
    |||||||| | ||||||||||||| | ||||||||||| ||||||||||| ||||||||||||| |||||||||||||||||||||| ||||| ||||||    
T  30926247 cagacctagtctctaagagatttagccactcataatcgagtttacaaatagcataatcaatataggaattaaaacatacatgaactgataaaaagttgaa 30926148  T
Q  116 aaaatcgccctcct 129  Q
    ||||||||||||||    
T  30926147 aaaatcgccctcct 30926134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 16 - 129
Target Start/End: Original strand, 13972299 - 13972412
Alignment:
Q  16 cagacctaatttctaagagatttaactactcataatcgtgtttacaaataacataatcaatatatgaattaaaacatacatgaactggtaaaaggttgaa 115  Q
    |||||||||| ||||||||||||| ||||||||||||| ||||||||||| |||||||||||  ||||| ||||||||||||||||  || |||||||||    
T  13972299 cagacctaatctctaagagatttagctactcataatcgagtttacaaatagcataatcaataattgaatcaaaacatacatgaactaatagaaggttgaa 13972398  T
Q  116 aaaatcgccctcct 129  Q
     |||||||||||||    
T  13972399 gaaatcgccctcct 13972412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 16 - 126
Target Start/End: Complemental strand, 22020768 - 22020658
Alignment:
Q  16 cagacctaatttctaagagatttaactactcataatcgtgtttacaaataacataatcaatatatgaattaaaacatacatgaactggtaaaaggttgaa 115  Q
    |||||||||| ||||||||||||| ||||||||||| | ||||||||||| |||||||||||   |||||||||||||||||||||| || |||||||||    
T  22020768 cagacctaatctctaagagatttagctactcataattgagtttacaaatagcataatcaataatggaattaaaacatacatgaactgatagaaggttgaa 22020669  T
Q  116 aaaatcgccct 126  Q
     ||||||||||    
T  22020668 gaaatcgccct 22020658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 16 - 129
Target Start/End: Original strand, 9185829 - 9185942
Alignment:
Q  16 cagacctaatttctaagagatttaactactcataatcgtgtttacaaataacataatcaatatatgaattaaaacatacatgaactggtaaaaggttgaa 115  Q
    |||||||||| ||||||||||||| ||||||||||| | ||||||||||| |||||||||||   |||| ||||||||||||||||| || |||||||||    
T  9185829 cagacctaatctctaagagatttagctactcataattgagtttacaaatagcataatcaatagtggaatcaaaacatacatgaactgatagaaggttgaa 9185928  T
Q  116 aaaatcgccctcct 129  Q
     |||||||||||||    
T  9185929 gaaatcgccctcct 9185942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 16 - 129
Target Start/End: Original strand, 9189058 - 9189171
Alignment:
Q  16 cagacctaatttctaagagatttaactactcataatcgtgtttacaaataacataatcaatatatgaattaaaacatacatgaactggtaaaaggttgaa 115  Q
    |||||||||| ||||||||||||| ||||||||||| | ||||||||||| |||||||||||   |||| ||||||||||||||||| || |||||||||    
T  9189058 cagacctaatctctaagagatttagctactcataattgagtttacaaatagcataatcaatagtggaatcaaaacatacatgaactgatagaaggttgaa 9189157  T
Q  116 aaaatcgccctcct 129  Q
     |||||||||||||    
T  9189158 gaaatcgccctcct 9189171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 16 - 129
Target Start/End: Original strand, 25960094 - 25960207
Alignment:
Q  16 cagacctaatttctaagagatttaactactcataatcgtgtttacaaataacataatcaatatatgaattaaaacatacatgaactggtaaaaggttgaa 115  Q
    |||||||||| ||||||||||||| ||||||||||| | ||||||||||| |||||||||||   |||||||||||||||| ||||| || |||||||||    
T  25960094 cagacctaatctctaagagatttagctactcataattgagtttacaaatagcataatcaatagtggaattaaaacatacataaactgatagaaggttgaa 25960193  T
Q  116 aaaatcgccctcct 129  Q
     |||||||||||||    
T  25960194 gaaatcgccctcct 25960207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 16 - 129
Target Start/End: Original strand, 42369116 - 42369229
Alignment:
Q  16 cagacctaatttctaagagatttaactactcataatcgtgtttacaaataacataatcaatatatgaattaaaacatacatgaactggtaaaaggttgaa 115  Q
    |||||||||| ||||||||||||| ||||||||||| ||||||||||||| |||||||||||   |||||||||||||||| || || || |||||||||    
T  42369116 cagacctaatctctaagagatttagctactcataatggtgtttacaaatagcataatcaatagtggaattaaaacatacataaattgatagaaggttgaa 42369215  T
Q  116 aaaatcgccctcct 129  Q
     |||||||||||||    
T  42369216 gaaatcgccctcct 42369229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 16 - 129
Target Start/End: Complemental strand, 8888335 - 8888222
Alignment:
Q  16 cagacctaatttctaagagatttaactactcataatcgtgtttacaaataacataatcaatatatgaattaaaacatacatgaactggtaaaaggttgaa 115  Q
    |||||||||| ||||||||||||| ||||||||||| | ||||||||||| |||||||||||   |||||||||||||||| ||||| || ||| |||||    
T  8888335 cagacctaatctctaagagatttagctactcataattgagtttacaaatagcataatcaatagtggaattaaaacatacataaactgatagaagattgaa 8888236  T
Q  116 aaaatcgccctcct 129  Q
     |||||||||||||    
T  8888235 gaaatcgccctcct 8888222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 16 - 129
Target Start/End: Complemental strand, 24234795 - 24234682
Alignment:
Q  16 cagacctaatttctaagagatttaactactcataatcgtgtttacaaataacataatcaatatatgaattaaaacatacatgaactggtaaaaggttgaa 115  Q
    ||||| |||| ||||||||||||| ||||||||||| | ||||||||||| |||||||||||   |||||||||||||||| ||||| || |||||||||    
T  24234795 cagacttaatctctaagagatttagctactcataatagagtttacaaatagcataatcaatagtggaattaaaacatacataaactgatagaaggttgaa 24234696  T
Q  116 aaaatcgccctcct 129  Q
     |||||||||||||    
T  24234695 gaaatcgccctcct 24234682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 16 - 129
Target Start/End: Complemental strand, 24238067 - 24237954
Alignment:
Q  16 cagacctaatttctaagagatttaactactcataatcgtgtttacaaataacataatcaatatatgaattaaaacatacatgaactggtaaaaggttgaa 115  Q
    |||||||||| ||||| ||||||| ||||||||||| | ||||||||||| |||||||||||   |||||||||||||||| ||||| || |||||||||    
T  24238067 cagacctaatctctaaaagatttagctactcataatagagtttacaaatagcataatcaatagtggaattaaaacatacataaactgatagaaggttgaa 24237968  T
Q  116 aaaatcgccctcct 129  Q
     |||||||||||||    
T  24237967 gaaatcgccctcct 24237954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 16 - 129
Target Start/End: Original strand, 43208295 - 43208408
Alignment:
Q  16 cagacctaatttctaagagatttaactactcataatcgtgtttacaaataacataatcaatatatgaattaaaacatacatgaactggtaaaaggttgaa 115  Q
    |||||||||| ||||||||||||| ||||||||| | | ||||||||||| |||||||||||   |||| ||||||||||||||||| || |||||||||    
T  43208295 cagacctaatctctaagagatttagctactcatatttgagtttacaaatagcataatcaatagtggaatcaaaacatacatgaactgatagaaggttgaa 43208394  T
Q  116 aaaatcgccctcct 129  Q
     |||||||||||||    
T  43208395 gaaatcgccctcct 43208408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 18 - 129
Target Start/End: Complemental strand, 30190034 - 30189923
Alignment:
Q  18 gacctaatttctaagagatttaactactcataatcgtgtttacaaataacataatcaatatatgaattaaaacatacatgaactggtaaaaggttgaaaa 117  Q
    |||||||| ||||||||||||| ||||||||||| | ||||||||||| |||||||||| ||  ||| ||||||||||||||||| || ||||||||| |    
T  30190034 gacctaatctctaagagatttagctactcataattgagtttacaaatagcataatcaatttagaaatcaaaacatacatgaactgatagaaggttgaaga 30189935  T
Q  118 aatcgccctcct 129  Q
    |||| |||||||    
T  30189934 aatctccctcct 30189923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 16 - 126
Target Start/End: Original strand, 16791164 - 16791274
Alignment:
Q  16 cagacctaatttctaagagatttaactactcataatcgtgtttacaaataacataatcaatatatgaattaaaacatacatgaactggtaaaaggttgaa 115  Q
    |||||||||  |||||  |||||||||||||||||| |||||||||||||||||||||| || | |||| || |||||||||||||||||||||  ||||    
T  16791164 cagacctaacctctaatggatttaactactcataatggtgtttacaaataacataatcattagaggaatcaatacatacatgaactggtaaaagagtgaa 16791263  T
Q  116 aaaatcgccct 126  Q
     ||||||||||    
T  16791264 gaaatcgccct 16791274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 16 - 126
Target Start/End: Complemental strand, 22630542 - 22630432
Alignment:
Q  16 cagacctaatttctaagagatttaactactcataatcgtgtttacaaataacataatcaatatatgaattaaaacatacatgaactggtaaaaggttgaa 115  Q
    |||||||||  ||||| ||||||| ||||||||||| |||||||||||||||||||||| || | |||| || |||||||||||||||||||||  ||||    
T  22630542 cagacctaacctctaatagatttagctactcataatggtgtttacaaataacataatcattagaggaatcaatacatacatgaactggtaaaagactgaa 22630443  T
Q  116 aaaatcgccct 126  Q
     ||||||||||    
T  22630442 gaaatcgccct 22630432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 16 - 129
Target Start/End: Complemental strand, 5105426 - 5105313
Alignment:
Q  16 cagacctaatttctaagagatttaactactcataatcgtgtttacaaataacataatcaatatatgaattaaaacatacatgaactggtaaaaggttgaa 115  Q
    |||||||||| ||||||||||||| ||||||||| | | ||||||||||| |||||||||||   |||| |||||||||||||| || || |||||||||    
T  5105426 cagacctaatctctaagagatttagctactcatatttgagtttacaaatagcataatcaatactggaatcaaaacatacatgaattgatagaaggttgaa 5105327  T
Q  116 aaaatcgccctcct 129  Q
     |||||||||||||    
T  5105326 gaaatcgccctcct 5105313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 16 - 129
Target Start/End: Original strand, 11348301 - 11348414
Alignment:
Q  16 cagacctaatttctaagagatttaactactcataatcgtgtttacaaataacataatcaatatatgaattaaaacatacatgaactggtaaaaggttgaa 115  Q
    |||||||||| ||||||||||||| ||||||||||| | ||||||||||| |||||||||||   |||| |||||||||| |||| | || |||||||||    
T  11348301 cagacctaatctctaagagatttagctactcataattgagtttacaaatagcataatcaatagtggaatcaaaacatacacgaaccgatagaaggttgaa 11348400  T
Q  116 aaaatcgccctcct 129  Q
     |||||||||||||    
T  11348401 gaaatcgccctcct 11348414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 16 - 129
Target Start/End: Complemental strand, 12219495 - 12219382
Alignment:
Q  16 cagacctaatttctaagagatttaactactcataatcgtgtttacaaataacataatcaatatatgaattaaaacatacatgaactggtaaaaggttgaa 115  Q
    |||||||||  |||||  |||||| ||||||||||| |||||||||||||||||||||| || | |||| || |||||||||||| ||||||||| ||||    
T  12219495 cagacctaacctctaatggatttagctactcataatggtgtttacaaataacataatcattagaggaatcaacacatacatgaacaggtaaaaggatgaa 12219396  T
Q  116 aaaatcgccctcct 129  Q
     |||||||||||||    
T  12219395 gaaatcgccctcct 12219382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 16 - 129
Target Start/End: Complemental strand, 27266488 - 27266375
Alignment:
Q  16 cagacctaatttctaagagatttaactactcataatcgtgtttacaaataacataatcaatatatgaattaaaacatacatgaactggtaaaaggttgaa 115  Q
    |||||||||| ||||||||||||| ||||||||||| | ||||||||||| |||||||||||   |||| ||||||| ||||||||| || |||||||||    
T  27266488 cagacctaatctctaagagatttagctactcataattgagtttacaaatagcataatcaataacggaatcaaaacatgcatgaactgatagaaggttgaa 27266389  T
Q  116 aaaatcgccctcct 129  Q
     |||||| ||||||    
T  27266388 gaaatcgtcctcct 27266375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 16 - 129
Target Start/End: Original strand, 37280082 - 37280195
Alignment:
Q  16 cagacctaatttctaagagatttaactactcataatcgtgtttacaaataacataatcaatatatgaattaaaacatacatgaactggtaaaaggttgaa 115  Q
    |||||| ||| ||||||||||||| ||||||||||| | ||||||||||| |||||||||||   |||| |||||||||| |||||| || |||||||||    
T  37280082 cagaccgaatctctaagagatttagctactcataattgagtttacaaatagcataatcaatagtggaatcaaaacatacacgaactgatagaaggttgaa 37280181  T
Q  116 aaaatcgccctcct 129  Q
     |||||||||||||    
T  37280182 gaaatcgccctcct 37280195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 16 - 129
Target Start/End: Complemental strand, 40781172 - 40781059
Alignment:
Q  16 cagacctaatttctaagagatttaactactcataatcgtgtttacaaataacataatcaatatatgaattaaaacatacatgaactggtaaaaggttgaa 115  Q
    |||||||||| ||||||||||||| ||||||||||| | ||||||||||| |||||||||||   |||| |||||||||||||| || || |||||||||    
T  40781172 cagacctaatctctaagagatttagctactcataattgagtttacaaatagcataatcaatagtggaatcaaaacatacatgaattgatagaaggttgaa 40781073  T
Q  116 aaaatcgccctcct 129  Q
     |||||| ||||||    
T  40781072 gaaatcgtcctcct 40781059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 16 - 129
Target Start/End: Complemental strand, 43723401 - 43723288
Alignment:
Q  16 cagacctaatttctaagagatttaactactcataatcgtgtttacaaataacataatcaatatatgaattaaaacatacatgaactggtaaaaggttgaa 115  Q
    |||||||||| ||||||||||||| ||||||||||| |  |||||||||| |||||||||||   |||| |||||||||||| |||| || |||||||||    
T  43723401 cagacctaatctctaagagatttagctactcataattgaatttacaaatagcataatcaatagtggaatcaaaacatacatgtactgatagaaggttgaa 43723302  T
Q  116 aaaatcgccctcct 129  Q
     |||||||||||||    
T  43723301 gaaatcgccctcct 43723288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 16 - 126
Target Start/End: Original strand, 1386827 - 1386937
Alignment:
Q  16 cagacctaatttctaagagatttaactactcataatcgtgtttacaaataacataatcaatatatgaattaaaacatacatgaactggtaaaaggttgaa 115  Q
    |||||||||  |||||  |||||| ||||||||||| |||||||||||||||||||||| || | |||| || |||||||||||||||||||||  ||||    
T  1386827 cagacctaacctctaatggatttagctactcataatggtgtttacaaataacataatcattagaggaatcaatacatacatgaactggtaaaagagtgaa 1386926  T
Q  116 aaaatcgccct 126  Q
     ||||||||||    
T  1386927 gaaatcgccct 1386937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 16 - 126
Target Start/End: Original strand, 17876416 - 17876526
Alignment:
Q  16 cagacctaatttctaagagatttaactactcataatcgtgtttacaaataacataatcaatatatgaattaaaacatacatgaactggtaaaaggttgaa 115  Q
    |||||||||  |||||  |||||| ||||||||||| |||||||||||||||||||||| || | |||| || |||||||||||||||||||||  ||||    
T  17876416 cagacctaacctctaatggatttagctactcataatggtgtttacaaataacataatcattagaggaatcaatacatacatgaactggtaaaagagtgaa 17876515  T
Q  116 aaaatcgccct 126  Q
     ||||||||||    
T  17876516 gaaatcgccct 17876526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 34 - 126
Target Start/End: Complemental strand, 16178809 - 16178717
Alignment:
Q  34 gatttaactactcataatcgtgtttacaaataacataatcaatatatgaattaaaacatacatgaactggtaaaaggttgaaaaaatcgccct 126  Q
    |||||| ||||||||||| |||||||||||||||||||||| || | |||| || |||||||||||||||||||||| |||| ||||| ||||    
T  16178809 gatttagctactcataatggtgtttacaaataacataatcattagaggaatcaatacatacatgaactggtaaaaggatgaagaaatcaccct 16178717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 16 - 103
Target Start/End: Original strand, 31427947 - 31428034
Alignment:
Q  16 cagacctaatttctaagagatttaactactcataatcgtgtttacaaataacataatcaatatatgaattaaaacatacatgaactgg 103  Q
    |||||||||| ||||||||||||| ||||||||||| | ||||||||||| ||||||||||  | |||||||||||||||| ||||||    
T  31427947 cagacctaatctctaagagatttagctactcataattgagtttacaaatagcataatcaatggaagaattaaaacatacataaactgg 31428034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 16 - 103
Target Start/End: Complemental strand, 33310366 - 33310279
Alignment:
Q  16 cagacctaatttctaagagatttaactactcataatcgtgtttacaaataacataatcaatatatgaattaaaacatacatgaactgg 103  Q
    |||||||||| ||||||||||||| ||||||||||| | ||||||||||||||||||||||  |  ||||||||||||||| ||||||    
T  33310366 cagacctaatctctaagagatttagctactcataattgagtttacaaataacataatcaatggaaaaattaaaacatacataaactgg 33310279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 16 - 103
Target Start/End: Complemental strand, 45453574 - 45453487
Alignment:
Q  16 cagacctaatttctaagagatttaactactcataatcgtgtttacaaataacataatcaatatatgaattaaaacatacatgaactgg 103  Q
    |||||||||| ||||||||||||| ||||||||||| | ||||||||||| ||||||||||  | |||||||||||||||| ||||||    
T  45453574 cagacctaatctctaagagatttagctactcataattgagtttacaaatagcataatcaatggaagaattaaaacatacataaactgg 45453487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 16 - 103
Target Start/End: Complemental strand, 45456861 - 45456774
Alignment:
Q  16 cagacctaatttctaagagatttaactactcataatcgtgtttacaaataacataatcaatatatgaattaaaacatacatgaactgg 103  Q
    |||||||||| ||||||||||||| ||||||||||| | ||||||||||| ||||||||||  | |||||||||||||||| ||||||    
T  45456861 cagacctaatctctaagagatttagctactcataattgagtttacaaatagcataatcaatggaagaattaaaacatacataaactgg 45456774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 16 - 129
Target Start/End: Complemental strand, 6826472 - 6826359
Alignment:
Q  16 cagacctaatttctaagagatttaactactcataatcgtgtttacaaataacataatcaatatatg-aattaaaacatacatgaactggtaaaaggttga 114  Q
    ||||| |||| |||| |||||||| ||||||||||||| ||||||||||| ||||||||||| ||| ||| |||||||||||||| || || ||||||||    
T  6826472 cagacttaatctctacgagatttagctactcataatcgagtttacaaatagcataatcaata-atgaaatcaaaacatacatgaattgatagaaggttga 6826374  T
Q  115 aaaaatcgccctcct 129  Q
    | || ||||||||||    
T  6826373 agaattcgccctcct 6826359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 35 - 126
Target Start/End: Complemental strand, 3874970 - 3874879
Alignment:
Q  35 atttaactactcataatcgtgtttacaaataacataatcaatatatgaattaaaacatacatgaactggtaaaaggttgaaaaaatcgccct 126  Q
    ||||| ||||||||||| |||||||||||||||||||||| || | |||| || ||||||||||||| |||||||  |||| ||||||||||    
T  3874970 atttagctactcataatggtgtttacaaataacataatcattagaggaatcaatacatacatgaactcgtaaaagagtgaataaatcgccct 3874879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 16 - 107
Target Start/End: Original strand, 9966709 - 9966800
Alignment:
Q  16 cagacctaatttctaagagatttaactactcataatcgtgtttacaaataacataatcaatatatgaattaaaacatacatgaactggtaaa 107  Q
    |||||||||| ||||||||||||| ||||||||||| | ||||||| ||||||||||||||  | ||||||||| |||||| |||| |||||    
T  9966709 cagacctaatctctaagagatttagctactcataattgagtttacatataacataatcaatgaaagaattaaaatatacataaacttgtaaa 9966800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 35 - 126
Target Start/End: Original strand, 37937643 - 37937734
Alignment:
Q  35 atttaactactcataatcgtgtttacaaataacataatcaatatatgaattaaaacatacatgaactggtaaaaggttgaaaaaatcgccct 126  Q
    ||||| ||||||||||| |||||||||||||||||||||| || | |||| || ||||||| |||||||||||||  |||| ||||||||||    
T  37937643 atttagctactcataatggtgtttacaaataacataatcattagaggaatcaatacatacaagaactggtaaaagagtgaagaaatcgccct 37937734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 16 - 103
Target Start/End: Complemental strand, 38015218 - 38015131
Alignment:
Q  16 cagacctaatttctaagagatttaactactcataatcgtgtttacaaataacataatcaatatatgaattaaaacatacatgaactgg 103  Q
    |||||||||| ||||||||||||| ||||||||||| | ||||||||||| ||||||||||  |  ||||||||||||||| ||||||    
T  38015218 cagacctaatctctaagagatttagctactcataattgagtttacaaatagcataatcaatggaaaaattaaaacatacataaactgg 38015131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 27 - 103
Target Start/End: Original strand, 31430106 - 31430182
Alignment:
Q  27 tctaagagatttaactactcataatcgtgtttacaaataacataatcaatatatgaattaaaacatacatgaactgg 103  Q
    ||||||||||||| ||||||||||| | ||||||||||| ||||||||||  | |||||||||||||||| ||||||    
T  31430106 tctaagagatttagctactcataattgagtttacaaatagcataatcaatggaagaattaaaacatacataaactgg 31430182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 34 - 131
Target Start/End: Original strand, 40259562 - 40259659
Alignment:
Q  34 gatttaactactcataatcgtgtttacaaataacataatcaatatatgaattaaaacatacatgaactggtaaaaggttgaaaaaatcgccctccttg 131  Q
    |||||| |||||||| || |||||||||||||||||||||| || | |||| || ||||||||||| ||||||| |  |||| |||||||||| ||||    
T  40259562 gatttagctactcatgatggtgtttacaaataacataatcattagaggaatcaatacatacatgaattggtaaatgagtgaagaaatcgcccttcttg 40259659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 55 - 129
Target Start/End: Original strand, 31586350 - 31586424
Alignment:
Q  55 gtttacaaataacataatcaatatatgaattaaaacatacatgaactggtaaaaggttgaaaaaatcgccctcct 129  Q
    ||||||||||| |||||||||||    ||| ||||||||||||||||| || |||| |||| |||||||||||||    
T  31586350 gtttacaaatagcataatcaatagtgaaatcaaaacatacatgaactgatagaaggatgaagaaatcgccctcct 31586424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 75; Significance: 1e-34; HSPs: 29)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 16 - 200
Target Start/End: Complemental strand, 11247481 - 11247300
Alignment:
Q  16 cagacctaatttctaagagatttaactactcataatcgtgtttacaaataacataatcaatatat---gaattaaaacatacatgaactggtaaaaggtt 112  Q
    |||||||||| ||||||||||||| ||||||||| | | ||||||||||||||||||||||||||   ||||||||| |||||||||||| || ||||||    
T  11247481 cagacctaatctctaagagatttagctactcatagttgagtttacaaataacataatcaatatataaagaattaaaatatacatgaactgatagaaggtt 11247382  T
Q  113 gaaaaaatcgccctccttgttttcgaaataagcttcagaataaataggcacagaaaatcgcccaatcatgtcacgattttagtaaatc 200  Q
    ||| |||      |||||||||||  ||||| ||| |||||||||||||||| ||  ||||| |||| ||||||||||| ||||||||    
T  11247381 gaagaaa------tccttgttttcagaataaactttagaataaataggcacataacttcgcctaatcgtgtcacgatttaagtaaatc 11247300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 20 - 129
Target Start/End: Complemental strand, 5259652 - 5259543
Alignment:
Q  20 cctaatttctaagagatttaactactcataatcgtgtttacaaataacataatcaatatatgaattaaaacatacatgaactggtaaaaggttgaaaaaa 119  Q
    |||||| ||||||||||||| ||||||||||||| ||||||| ||| ||||||||||||| |||| ||||||||||||||||| || ||||||||| |||    
T  5259652 cctaatctctaagagatttagctactcataatcgagtttacatatagcataatcaatataggaatcaaaacatacatgaactgatagaaggttgaagaaa 5259553  T
Q  120 tcgccctcct 129  Q
    ||||||||||    
T  5259552 tcgccctcct 5259543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 16 - 129
Target Start/End: Complemental strand, 13004908 - 13004795
Alignment:
Q  16 cagacctaatttctaagagatttaactactcataatcgtgtttacaaataacataatcaatatatgaattaaaacatacatgaactggtaaaaggttgaa 115  Q
    |||||||||| ||||||||||||| ||||||||||| | ||||||||||| |||||||||||   |||||||||||||||||||||| || |||||||||    
T  13004908 cagacctaatctctaagagatttagctactcataattgagtttacaaatagcataatcaataatggaattaaaacatacatgaactgatagaaggttgaa 13004809  T
Q  116 aaaatcgccctcct 129  Q
     |||||||||||||    
T  13004808 gaaatcgccctcct 13004795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 16 - 129
Target Start/End: Original strand, 11126100 - 11126213
Alignment:
Q  16 cagacctaatttctaagagatttaactactcataatcgtgtttacaaataacataatcaatatatgaattaaaacatacatgaactggtaaaaggttgaa 115  Q
    |||||||||| ||||||||||||| |||| |||||||| ||||||||||| |||||||||||||| ||| || |||||||||||| ||||||||| ||||    
T  11126100 cagacctaatctctaagagatttagctacccataatcgagtttacaaatagcataatcaatatataaatcaatacatacatgaacaggtaaaaggatgaa 11126199  T
Q  116 aaaatcgccctcct 129  Q
     |||||||| ||||    
T  11126200 gaaatcgccgtcct 11126213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 16 - 129
Target Start/End: Original strand, 26942839 - 26942952
Alignment:
Q  16 cagacctaatttctaagagatttaactactcataatcgtgtttacaaataacataatcaatatatgaattaaaacatacatgaactggtaaaaggttgaa 115  Q
    |||||||||| ||||||||||||| ||||||||||| | ||||||||||| |||||||||||   |||||||||||||||| ||||| || |||||||||    
T  26942839 cagacctaatctctaagagatttagctactcataattgagtttacaaatagcataatcaatagtggaattaaaacatacataaactgatagaaggttgaa 26942938  T
Q  116 aaaatcgccctcct 129  Q
     |||||||||||||    
T  26942939 gaaatcgccctcct 26942952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 16 - 129
Target Start/End: Original strand, 28665668 - 28665781
Alignment:
Q  16 cagacctaatttctaagagatttaactactcataatcgtgtttacaaataacataatcaatatatgaattaaaacatacatgaactggtaaaaggttgaa 115  Q
    |||||||||| ||||||||||||| ||||||||||| | ||||||||||| |||||||||||   |||| ||||||||||||||||| || |||||||||    
T  28665668 cagacctaatctctaagagatttagctactcataattgagtttacaaatagcataatcaatagtggaatcaaaacatacatgaactgatagaaggttgaa 28665767  T
Q  116 aaaatcgccctcct 129  Q
     |||||||||||||    
T  28665768 gaaatcgccctcct 28665781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 16 - 129
Target Start/End: Complemental strand, 30655163 - 30655050
Alignment:
Q  16 cagacctaatttctaagagatttaactactcataatcgtgtttacaaataacataatcaatatatgaattaaaacatacatgaactggtaaaaggttgaa 115  Q
    |||||||||| ||||||||||||| ||||||||||| | ||||||||||| |||||||||||   |||||||||||||||| ||||| || |||||||||    
T  30655163 cagacctaatctctaagagatttagctactcataattgagtttacaaatagcataatcaatagtggaattaaaacatacataaactgatagaaggttgaa 30655064  T
Q  116 aaaatcgccctcct 129  Q
     |||||||||||||    
T  30655063 gaaatcgccctcct 30655050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 17 - 129
Target Start/End: Complemental strand, 2378948 - 2378836
Alignment:
Q  17 agacctaatttctaagagatttaactactcataatcgtgtttacaaataacataatcaatatatgaattaaaacatacatgaactggtaaaaggttgaaa 116  Q
    ||||||||| ||||||||||||| ||||||||||| | ||||||||||| |||||||||||   |||||||||||||||| ||||| || |||||||||     
T  2378948 agacctaatctctaagagatttagctactcataattgagtttacaaatagcataatcaatagtggaattaaaacatacataaactgatagaaggttgaag 2378849  T
Q  117 aaatcgccctcct 129  Q
    |||||||||||||    
T  2378848 aaatcgccctcct 2378836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 16 - 114
Target Start/End: Complemental strand, 2846021 - 2845923
Alignment:
Q  16 cagacctaatttctaagagatttaactactcataatcgtgtttacaaataacataatcaatatatgaattaaaacatacatgaactggtaaaaggttga 114  Q
    |||| ||||| ||||||||||||| ||||||||||| | ||||||||||| ||||||||||||| |||||||||||||||||||| | |||||||||||    
T  2846021 cagagctaatctctaagagatttagctactcataattgagtttacaaatagcataatcaatataagaattaaaacatacatgaaccgataaaaggttga 2845923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 19 - 129
Target Start/End: Complemental strand, 6512969 - 6512859
Alignment:
Q  19 acctaatttctaagagatttaactactcataatcgtgtttacaaataacataatcaatatatgaattaaaacatacatgaactggtaaaaggttgaaaaa 118  Q
    ||||||| ||||||||||||| ||||||||||| | ||||||||||| |||||||||||   |||||||||||||||||||||| || ||||||||| ||    
T  6512969 acctaatctctaagagatttagctactcataattgagtttacaaatagcataatcaataatagaattaaaacatacatgaactgatagaaggttgaagaa 6512870  T
Q  119 atcgccctcct 129  Q
    |||||| ||||    
T  6512869 atcgccttcct 6512859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 16 - 129
Target Start/End: Complemental strand, 10289692 - 10289579
Alignment:
Q  16 cagacctaatttctaagagatttaactactcataatcgtgtttacaaataacataatcaatatatgaattaaaacatacatgaactggtaaaaggttgaa 115  Q
    |||||||||| |||||||||||||  |||||||||| | ||||||||||| |||||||||||   |||| ||||||||||||||||| || |||||||||    
T  10289692 cagacctaatctctaagagatttagttactcataattgagtttacaaatagcataatcaatagtggaatcaaaacatacatgaactgatagaaggttgaa 10289593  T
Q  116 aaaatcgccctcct 129  Q
     |||||||||||||    
T  10289592 gaaatcgccctcct 10289579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 16 - 129
Target Start/End: Original strand, 11188320 - 11188433
Alignment:
Q  16 cagacctaatttctaagagatttaactactcataatcgtgtttacaaataacataatcaatatatgaattaaaacatacatgaactggtaaaaggttgaa 115  Q
    ||||||| || ||||||||||||| ||||||||||| | ||||||||||| |||||||||||   |||  ||||||||||||||||| || |||||||||    
T  11188320 cagacctgatctctaagagatttagctactcataattgagtttacaaatagcataatcaatagtggaaccaaaacatacatgaactgatagaaggttgaa 11188419  T
Q  116 aaaatcgccctcct 129  Q
     |||||||||||||    
T  11188420 gaaatcgccctcct 11188433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 16 - 128
Target Start/End: Original strand, 3597186 - 3597298
Alignment:
Q  16 cagacctaatttctaagagatttaactactcataatcgtgtttacaaataacataatcaatatatgaattaaaacatacatgaactggtaaaaggttgaa 115  Q
    |||||||||| ||||||||||||| ||||||||||| | ||||||||||| |||||||||||   |||| |||||||| | |||| ||||||||||| ||    
T  3597186 cagacctaatctctaagagatttagctactcataattgagtttacaaatagcataatcaatagtggaatcaaaacataaacgaaccggtaaaaggtttaa 3597285  T
Q  116 aaaatcgccctcc 128  Q
     ||||||||||||    
T  3597286 gaaatcgccctcc 3597298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 16 - 107
Target Start/End: Original strand, 28108193 - 28108284
Alignment:
Q  16 cagacctaatttctaagagatttaactactcataatcgtgtttacaaataacataatcaatatatgaattaaaacatacatgaactggtaaa 107  Q
    |||||||||| | ||||||||||| ||||||||||||| ||||||||||| ||||||||||  | |||||||||||||||| ||||||||||    
T  28108193 cagacctaatatataagagatttagctactcataatcgagtttacaaatagcataatcaatgaaagaattaaaacatacataaactggtaaa 28108284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 16 - 126
Target Start/End: Original strand, 18856429 - 18856539
Alignment:
Q  16 cagacctaatttctaagagatttaactactcataatcgtgtttacaaataacataatcaatatatgaattaaaacatacatgaactggtaaaaggttgaa 115  Q
    |||||||||  |||||  |||||| ||||||||||| |||||||||||||||||||||| || | |||| || |||||||||||||||||||||  ||||    
T  18856429 cagacctaacctctaatggatttagctactcataatggtgtttacaaataacataatcattagaggaatcaatacatacatgaactggtaaaagagtgaa 18856528  T
Q  116 aaaatcgccct 126  Q
     ||||||||||    
T  18856529 gaaatcgccct 18856539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 17 - 107
Target Start/End: Original strand, 28112170 - 28112260
Alignment:
Q  17 agacctaatttctaagagatttaactactcataatcgtgtttacaaataacataatcaatatatgaattaaaacatacatgaactggtaaa 107  Q
    ||||||||| ||||||||||||| ||||||||||| | ||||||||||| ||||||||||  | |||||||||||||||| ||||||||||    
T  28112170 agacctaatctctaagagatttagctactcataattgagtttacaaatagcataatcaattaaagaattaaaacatacataaactggtaaa 28112260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 16 - 129
Target Start/End: Complemental strand, 4512192 - 4512079
Alignment:
Q  16 cagacctaatttctaagagatttaactactcataatcgtgtttacaaataacataatcaatatatgaattaaaacatacatgaactggtaaaaggttgaa 115  Q
    |||||||||  |||||  |||||| ||| ||||||| |||||||||||||||||||||| || | |||| || |||||||||||| ||||||||| ||||    
T  4512192 cagacctaacctctaatggatttagctagtcataatggtgtttacaaataacataatcattagaggaatcaatacatacatgaacaggtaaaaggatgaa 4512093  T
Q  116 aaaatcgccctcct 129  Q
     |||||||||||||    
T  4512092 gaaatcgccctcct 4512079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 16 - 129
Target Start/End: Complemental strand, 11401976 - 11401863
Alignment:
Q  16 cagacctaatttctaagagatttaactactcataatcgtgtttacaaataacataatcaatatatgaattaaaacatacatgaactggtaaaaggttgaa 115  Q
    |||||||||| ||||||||||||| ||||||||||| | ||||||||||| |||||||||||   |||| |||||||| | |||| | || |||||||||    
T  11401976 cagacctaatctctaagagatttagctactcataattgagtttacaaatagcataatcaatagtggaatcaaaacataaacgaaccgatagaaggttgaa 11401877  T
Q  116 aaaatcgccctcct 129  Q
     |||||||||||||    
T  11401876 gaaatcgccctcct 11401863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 17 - 126
Target Start/End: Complemental strand, 24399898 - 24399789
Alignment:
Q  17 agacctaatttctaagagatttaactactcataatcgtgtttacaaataacataatcaatatatgaattaaaacatacatgaactggtaaaaggttgaaa 116  Q
    ||||||||  |||||  |||||| |||||||||||  ||||||||||||||||||||| || | |||| || |||||||| ||||||||||||||||||     
T  24399898 agacctaacctctaatggatttagctactcataatgatgtttacaaataacataatcattagaggaatcaatacatacattaactggtaaaaggttgaag 24399799  T
Q  117 aaatcgccct 126  Q
    ||||||||||    
T  24399798 aaatcgccct 24399789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 35 - 126
Target Start/End: Complemental strand, 24410000 - 24409909
Alignment:
Q  35 atttaactactcataatcgtgtttacaaataacataatcaatatatgaattaaaacatacatgaactggtaaaaggttgaaaaaatcgccct 126  Q
    ||||| ||||||||||| ||||||| |||||||||||||| || | |||| || |||||||| |||||||||||||||||| ||||||||||    
T  24410000 atttagctactcataatggtgtttagaaataacataatcattagaggaatcaatacatacattaactggtaaaaggttgaagaaatcgccct 24409909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 16 - 103
Target Start/End: Complemental strand, 31072024 - 31071937
Alignment:
Q  16 cagacctaatttctaagagatttaactactcataatcgtgtttacaaataacataatcaatatatgaattaaaacatacatgaactgg 103  Q
    |||||||||| ||||||||||||| ||||||||||| | |||||||||||||||||| |||  | |||||||||||||||| ||||||    
T  31072024 cagacctaatctctaagagatttagctactcataattgagtttacaaataacataataaatggaagaattaaaacatacataaactgg 31071937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 16 - 126
Target Start/End: Complemental strand, 28230314 - 28230204
Alignment:
Q  16 cagacctaatttctaagagatttaactactcataatcgtgtttacaaataacataatcaatatatgaattaaaacatacatgaactggtaaaaggttgaa 115  Q
    |||||||||  |||||  |||||| ||||||||||| |||||||||||||||||||||| || | |||| ||  ||||||||||||||||||||  ||||    
T  28230314 cagacctaacctctaatggatttagctactcataatggtgtttacaaataacataatcattagaggaatcaatgcatacatgaactggtaaaagagtgaa 28230215  T
Q  116 aaaatcgccct 126  Q
     ||||||||||    
T  28230214 gaaatcgccct 28230204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 17 - 126
Target Start/End: Complemental strand, 19475721 - 19475612
Alignment:
Q  17 agacctaatttctaagagatttaactactcataatcgtgtttacaaataacataatcaatatatgaattaaaacatacatgaactggtaaaaggttgaaa 116  Q
    ||||||||  |||||  |||||| ||||||||||| |||||||||||||||||||||| || | |||| || ||||| |||||||||||||||  ||||     
T  19475721 agacctaacctctaatggatttagctactcataatggtgtttacaaataacataatcattagaggaatcaatacataaatgaactggtaaaagagtgaag 19475622  T
Q  117 aaatcgccct 126  Q
    ||||||||||    
T  19475621 aaatcgccct 19475612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 41 - 126
Target Start/End: Complemental strand, 13942258 - 13942173
Alignment:
Q  41 ctactcataatcgtgtttacaaataacataatcaatatatgaattaaaacatacatgaactggtaaaaggttgaaaaaatcgccct 126  Q
    ||||||||||| |||||||||||||||||||||| || | |||| || ||||||||||||| |||||||  |||| ||||||||||    
T  13942258 ctactcataatggtgtttacaaataacataatcattagaggaatcaatacatacatgaactagtaaaagagtgaagaaatcgccct 13942173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 16 - 129
Target Start/End: Complemental strand, 20185464 - 20185351
Alignment:
Q  16 cagacctaatttctaagagatttaactactcataatcgtgtttacaaataacataatcaatatatgaattaaaacatacatgaactggtaaaaggttgaa 115  Q
    |||||||||| |||||| |||||| |||| |||||| | ||||||||||| |||||||||||   |||| ||||||||||||||||| |  |||||||||    
T  20185464 cagacctaatctctaagggatttagctacccataattgagtttacaaatagcataatcaatagtggaatcaaaacatacatgaactgatggaaggttgaa 20185365  T
Q  116 aaaatcgccctcct 129  Q
      |||| |||||||    
T  20185364 gtaatctccctcct 20185351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 16 - 129
Target Start/End: Original strand, 22150527 - 22150640
Alignment:
Q  16 cagacctaatttctaagagatttaactactcataatcgtgtttacaaataacataatcaatatatgaattaaaacatacatgaactggtaaaaggttgaa 115  Q
    |||||||||| |||||| |||||| |||| |||||| | ||||||||||| |||||||||||   |||| ||||||||||||||||| |  |||||||||    
T  22150527 cagacctaatctctaagggatttagctacccataattgagtttacaaatagcataatcaatagtggaatcaaaacatacatgaactgatggaaggttgaa 22150626  T
Q  116 aaaatcgccctcct 129  Q
      |||| |||||||    
T  22150627 gtaatctccctcct 22150640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 16 - 129
Target Start/End: Original strand, 26898273 - 26898386
Alignment:
Q  16 cagacctaatttctaagagatttaactactcataatcgtgtttacaaataacataatcaatatatgaattaaaacatacatgaactggtaaaaggttgaa 115  Q
    |||||||||  |||||  |||||| ||||||||||| || ||||||||||||||||||| || | |||| || ||||||||||||  |||||||| ||||    
T  26898273 cagacctaacctctaatggatttagctactcataatggtatttacaaataacataatcattagaggaatcaatacatacatgaacatgtaaaaggatgaa 26898372  T
Q  116 aaaatcgccctcct 129  Q
     ||||| |||||||    
T  26898373 gaaatcaccctcct 26898386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 55 - 129
Target Start/End: Complemental strand, 15543690 - 15543616
Alignment:
Q  55 gtttacaaataacataatcaatatatgaattaaaacatacatgaactggtaaaaggttgaaaaaatcgccctcct 129  Q
    ||||||||||| |||||||||||   |||| ||||||||||||||||| || ||||||||| |||||||||||||    
T  15543690 gtttacaaatagcataatcaatagtggaatcaaaacatacatgaactgatagaaggttgaagaaatcgccctcct 15543616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 16 - 98
Target Start/End: Original strand, 14281925 - 14282007
Alignment:
Q  16 cagacctaatttctaagagatttaactactcataatcgtgtttacaaataacataatcaatatatgaattaaaacatacatga 98  Q
    |||||||||| | ||||||||||| |||| |||||| | |||| |||||| |||||||||||   ||||||||||||||||||    
T  14281925 cagacctaatctttaagagatttagctacacataattgagtttccaaatagcataatcaataatggaattaaaacatacatga 14282007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 75; Significance: 1e-34; HSPs: 23)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 19 - 129
Target Start/End: Original strand, 34066848 - 34066958
Alignment:
Q  19 acctaatttctaagagatttaactactcataatcgtgtttacaaataacataatcaatatatgaattaaaacatacatgaactggtaaaaggttgaaaaa 118  Q
    ||||||| ||||||||||||| ||||||||||||| ||||||||||| ||||||||||||| |||| ||||||||||||||||| || ||||||||| ||    
T  34066848 acctaatctctaagagatttagctactcataatcgagtttacaaatagcataatcaatataggaatcaaaacatacatgaactgatagaaggttgaataa 34066947  T
Q  119 atcgccctcct 129  Q
    |||||||||||    
T  34066948 atcgccctcct 34066958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 20 - 126
Target Start/End: Original strand, 34732767 - 34732873
Alignment:
Q  20 cctaatttctaagagatttaactactcataatcgtgtttacaaataacataatcaatatatgaattaaaacatacatgaactggtaaaaggttgaaaaaa 119  Q
    |||||| ||||| ||||||| ||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||| || ||||||||| |||    
T  34732767 cctaatctctaatagatttagctactcataatcgagtttacaaataacataatcaatataggaattaaaacatacatgaactgatagaaggttgaagaaa 34732866  T
Q  120 tcgccct 126  Q
    |||||||    
T  34732867 tcgccct 34732873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 17 - 129
Target Start/End: Original strand, 11668431 - 11668543
Alignment:
Q  17 agacctaatttctaagagatttaactactcataatcgtgtttacaaataacataatcaatatatgaattaaaacatacatgaactggtaaaaggttgaaa 116  Q
    ||||||||| ||||||||||||| |||| |||||||| ||||||||||| ||||||||||||| |||| ||||||||||||||||| || |||||||||     
T  11668431 agacctaatctctaagagatttagctacacataatcgagtttacaaatagcataatcaatataggaatcaaaacatacatgaactgatagaaggttgaag 11668530  T
Q  117 aaatcgccctcct 129  Q
    || ||||||||||    
T  11668531 aagtcgccctcct 11668543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 16 - 129
Target Start/End: Original strand, 41058706 - 41058819
Alignment:
Q  16 cagacctaatttctaagagatttaactactcataatcgtgtttacaaataacataatcaatatatgaattaaaacatacatgaactggtaaaaggttgaa 115  Q
    |||||||||| ||||||||||||| ||||||||||| | ||||||||||| |||||||||||   |||| ||||||||||||||||| || |||||||||    
T  41058706 cagacctaatctctaagagatttagctactcataattgagtttacaaatagcataatcaatagtggaatcaaaacatacatgaactgatagaaggttgaa 41058805  T
Q  116 aaaatcgccctcct 129  Q
     |||||||||||||    
T  41058806 gaaatcgccctcct 41058819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 16 - 126
Target Start/End: Complemental strand, 2405229 - 2405119
Alignment:
Q  16 cagacctaatttctaagagatttaactactcataatcgtgtttacaaataacataatcaatatatgaattaaaacatacatgaactggtaaaaggttgaa 115  Q
    |||||||||  |||||  |||||| ||||||||||| |||||||||||||||||||||| || | |||| || |||||||||||||||||||||||||||    
T  2405229 cagacctaacctctaatggatttagctactcataatggtgtttacaaataacataatcattagaggaatcaatacatacatgaactggtaaaaggttgaa 2405130  T
Q  116 aaaatcgccct 126  Q
     ||||||||||    
T  2405129 gaaatcgccct 2405119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 16 - 129
Target Start/End: Complemental strand, 20398572 - 20398459
Alignment:
Q  16 cagacctaatttctaagagatttaactactcataatcgtgtttacaaataacataatcaatatatgaattaaaacatacatgaactggtaaaaggttgaa 115  Q
    |||||||||| ||||||||||||| ||||||||||| | ||||||||||| |||||||||||   |||||||||||||||  ||||| || |||||||||    
T  20398572 cagacctaatctctaagagatttagctactcataattgagtttacaaatagcataatcaatagcggaattaaaacatacacaaactgatagaaggttgaa 20398473  T
Q  116 aaaatcgccctcct 129  Q
     |||||||||||||    
T  20398472 gaaatcgccctcct 20398459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 16 - 129
Target Start/End: Original strand, 21018870 - 21018983
Alignment:
Q  16 cagacctaatttctaagagatttaactactcataatcgtgtttacaaataacataatcaatatatgaattaaaacatacatgaactggtaaaaggttgaa 115  Q
    |||||||||| ||||||||||||| ||||||||||||| ||||||||||| |||||||||||   |||| ||||||||||||||||| || |||||||||    
T  21018870 cagacctaatctctaagagatttagctactcataatcgagtttacaaatagcataatcaataatggaatcaaaacatacatgaactgatagaaggttgaa 21018969  T
Q  116 aaaatcgccctcct 129  Q
     || || |||||||    
T  21018970 gaattctccctcct 21018983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 16 - 129
Target Start/End: Complemental strand, 45941135 - 45941022
Alignment:
Q  16 cagacctaatttctaagagatttaactactcataatcgtgtttacaaataacataatcaatatatgaattaaaacatacatgaactggtaaaaggttgaa 115  Q
    |||||||||| ||||||||||||| ||||||||| | | ||||||||||| |||||||||||   |||| ||||||||||||||||| || |||||||||    
T  45941135 cagacctaatctctaagagatttagctactcatatttgagtttacaaatagcataatcaatagtggaatcaaaacatacatgaactgatagaaggttgaa 45941036  T
Q  116 aaaatcgccctcct 129  Q
     |||||||||||||    
T  45941035 gaaatcgccctcct 45941022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 16 - 129
Target Start/End: Complemental strand, 28110776 - 28110663
Alignment:
Q  16 cagacctaatttctaagagatttaactactcataatcgtgtttacaaataacataatcaatatatgaattaaaacatacatgaactggtaaaaggttgaa 115  Q
    |||||||||| ||||||||||||| ||||||||||| | ||||||||||| |||||||||||   |||| |||||||||| |||| | || |||||||||    
T  28110776 cagacctaatctctaagagatttagctactcataattgagtttacaaatagcataatcaatagtggaatcaaaacatacacgaaccgctagaaggttgaa 28110677  T
Q  116 aaaatcgccctcct 129  Q
     |||||||||||||    
T  28110676 gaaatcgccctcct 28110663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 16 - 127
Target Start/End: Original strand, 23022328 - 23022439
Alignment:
Q  16 cagacctaatttctaagagatttaactactcataatcgtgtttacaaataacataatcaatatatgaattaaaacatacatgaactggtaaaaggttgaa 115  Q
    |||||||||| ||||||||||||| ||||||||||| | ||||||||||| |||||||||||    || |||||||||||| ||||| || |||||||||    
T  23022328 cagacctaatctctaagagatttagctactcataattgagtttacaaatagcataatcaatagtgaaagtaaaacatacattaactgatagaaggttgaa 23022427  T
Q  116 aaaatcgccctc 127  Q
     |||||||||||    
T  23022428 gaaatcgccctc 23022439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 35 - 129
Target Start/End: Original strand, 49853501 - 49853595
Alignment:
Q  35 atttaactactcataatcgtgtttacaaataacataatcaatatatgaattaaaacatacatgaactggtaaaaggttgaaaaaatcgccctcct 129  Q
    ||||| ||||||||||| |||||||||||||||||||||| || | |||| || |||||||||||| ||||||||| |||| |||||||||||||    
T  49853501 atttagctactcataatggtgtttacaaataacataatcattagaggaatcaatacatacatgaacaggtaaaaggatgaagaaatcgccctcct 49853595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 19 - 107
Target Start/End: Complemental strand, 7635361 - 7635273
Alignment:
Q  19 acctaatttctaagagatttaactactcataatcgtgtttacaaataacataatcaatatatgaattaaaacatacatgaactggtaaa 107  Q
    ||||||| ||||||||||||||||||||||||| | ||||||||||| ||||||||||  | |||||||||||||||| |||| |||||    
T  7635361 acctaatctctaagagatttaactactcataattgagtttacaaatagcataatcaatgaaagaattaaaacatacataaactagtaaa 7635273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 16 - 103
Target Start/End: Original strand, 6071358 - 6071445
Alignment:
Q  16 cagacctaatttctaagagatttaactactcataatcgtgtttacaaataacataatcaatatatgaattaaaacatacatgaactgg 103  Q
    |||||||||| ||||||||||||| ||||||||||| | ||||||||||| ||||||||||  | |||||||||||||||| ||||||    
T  6071358 cagacctaatctctaagagatttagctactcataattgagtttacaaatagcataatcaatggaagaattaaaacatacataaactgg 6071445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 139 - 204
Target Start/End: Original strand, 11668605 - 11668670
Alignment:
Q  139 aataagcttcagaataaataggcacagaaaatcgcccaatcatgtcacgattttagtaaatcgtgt 204  Q
    ||||| |||||||||||||||||||| |||||||||||| ||||||||||||| ||||||||||||    
T  11668605 aataaacttcagaataaataggcacaaaaaatcgcccaaacatgtcacgatttaagtaaatcgtgt 11668670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 34 - 126
Target Start/End: Original strand, 3797248 - 3797340
Alignment:
Q  34 gatttaactactcataatcgtgtttacaaataacataatcaatatatgaattaaaacatacatgaactggtaaaaggttgaaaaaatcgccct 126  Q
    |||||| ||| ||||||| |||||||||||||||||||||| || | |||| || ||||||||||| ||||||||| ||||| ||||||||||    
T  3797248 gatttagctattcataatggtgtttacaaataacataatcattagaggaatcaatacatacatgaaatggtaaaagattgaagaaatcgccct 3797340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 16 - 107
Target Start/End: Original strand, 27332175 - 27332266
Alignment:
Q  16 cagacctaatttctaagagatttaactactcataatcgtgtttacaaataacataatcaatatatgaattaaaacatacatgaactggtaaa 107  Q
    |||||||||| | ||||||||||| ||||||||||| | ||||||| ||| ||||||||||  | |||||||||||||||| ||||||||||    
T  27332175 cagacctaatctttaagagatttagctactcataattgagtttacagatagcataatcaatgaaagaattaaaacatacataaactggtaaa 27332266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 16 - 103
Target Start/End: Original strand, 27536690 - 27536777
Alignment:
Q  16 cagacctaatttctaagagatttaactactcataatcgtgtttacaaataacataatcaatatatgaattaaaacatacatgaactgg 103  Q
    |||||||||| ||||||||||||| ||||||||||| | ||||||||||| ||||||||||  |  ||||||||||||||| ||||||    
T  27536690 cagacctaatctctaagagatttagctactcataattgagtttacaaatagcataatcaatgaaaaaattaaaacatacataaactgg 27536777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 16 - 103
Target Start/End: Complemental strand, 31204557 - 31204470
Alignment:
Q  16 cagacctaatttctaagagatttaactactcataatcgtgtttacaaataacataatcaatatatgaattaaaacatacatgaactgg 103  Q
    |||||||||| ||||||||||||| ||||||||||| | ||||||||||| ||||||||||  |  ||||||||||||||| ||||||    
T  31204557 cagacctaatctctaagagatttagctactcataattgagtttacaaatagcataatcaatggaaaaattaaaacatacataaactgg 31204470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 16 - 103
Target Start/End: Original strand, 45961149 - 45961236
Alignment:
Q  16 cagacctaatttctaagagatttaactactcataatcgtgtttacaaataacataatcaatatatgaattaaaacatacatgaactgg 103  Q
    |||||||||| ||||||||||||| ||||||||||| | ||||||||||| ||||||||||  |  ||||||||||||||| ||||||    
T  45961149 cagacctaatctctaagagatttagctactcataattgagtttacaaatagcataatcaatggaaaaattaaaacatacataaactgg 45961236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 36 - 129
Target Start/End: Original strand, 906113 - 906206
Alignment:
Q  36 tttaactactcataatcgtgtttacaaataacataatcaatatatgaattaaaacatacatgaactggtaaaaggttgaaaaaatcgccctcct 129  Q
    |||| ||||||||||| |||||||||||||||||||||| || | |||| || |||||||||||| ||||||||| |||| ||| ||| |||||    
T  906113 tttagctactcataatggtgtttacaaataacataatcattagaggaatcaatacatacatgaacaggtaaaaggatgaagaaaacgcactcct 906206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 16 - 101
Target Start/End: Original strand, 37184268 - 37184353
Alignment:
Q  16 cagacctaatttctaagagatttaactactcataatcgtgtttacaaataacataatcaatatatgaattaaaacatacatgaact 101  Q
    |||||||||| ||||||||||||| ||||||||||| | ||||||||||| ||||||||||  |  ||||||||||||||| ||||    
T  37184268 cagacctaatctctaagagatttagctactcataattgagtttacaaatagcataatcaatggaaaaattaaaacatacataaact 37184353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 16 - 102
Target Start/End: Original strand, 21107695 - 21107781
Alignment:
Q  16 cagacctaatttctaagagatttaactactcataatcgtgtttacaaataacataatcaatatatg-aattaaaacatacatgaactg 102  Q
    |||||||||| ||||  ||||||| ||||||||||||| ||||||||||| ||||||||||| ||| ||| |||||||||||||||||    
T  21107695 cagacctaatctctataagatttagctactcataatcgagtttacaaatagcataatcaata-atgaaatcaaaacatacatgaactg 21107781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 16 - 48
Target Start/End: Original strand, 37907650 - 37907682
Alignment:
Q  16 cagacctaatttctaagagatttaactactcat 48  Q
    |||||||||| ||||||||||||||||||||||    
T  37907650 cagacctaatctctaagagatttaactactcat 37907682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 71; Significance: 3e-32; HSPs: 28)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 19 - 129
Target Start/End: Original strand, 18239903 - 18240013
Alignment:
Q  19 acctaatttctaagagatttaactactcataatcgtgtttacaaataacataatcaatatatgaattaaaacatacatgaactggtaaaaggttgaaaaa 118  Q
    ||||||| ||||||||||||||||||||||||| | ||||||||||| ||||||||||||| |||| |||||||||| |||||| || ||||||||| ||    
T  18239903 acctaatctctaagagatttaactactcataattgagtttacaaatagcataatcaatataggaatcaaaacatacaggaactgatagaaggttgaagaa 18240002  T
Q  119 atcgccctcct 129  Q
    |||||||||||    
T  18240003 atcgccctcct 18240013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 16 - 129
Target Start/End: Complemental strand, 18952411 - 18952298
Alignment:
Q  16 cagacctaatttctaagagatttaactactcataatcgtgtttacaaataacataatcaatatatgaattaaaacatacatgaactggtaaaaggttgaa 115  Q
    |||||||||| ||||||||||||| ||||||||||| | |||||| |||||||||||||||||| |||| ||||||| ||||||||| ||||||||||||    
T  18952411 cagacctaatctctaagagatttagctactcataattgagtttaccaataacataatcaatataggaatcaaaacatgcatgaactgataaaaggttgaa 18952312  T
Q  116 aaaatcgccctcct 129  Q
     ||||| |||||||    
T  18952311 gaaatcaccctcct 18952298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 16 - 129
Target Start/End: Complemental strand, 33551839 - 33551726
Alignment:
Q  16 cagacctaatttctaagagatttaactactcataatcgtgtttacaaataacataatcaatatatgaattaaaacatacatgaactggtaaaaggttgaa 115  Q
    |||||||||| ||||||||||||| ||||||||||||| ||||||||||| |||||||||||   |||| ||||||||||||||||| || |||||||||    
T  33551839 cagacctaatctctaagagatttagctactcataatcgagtttacaaatagcataatcaataatggaatcaaaacatacatgaactgatagaaggttgaa 33551740  T
Q  116 aaaatcgccctcct 129  Q
     |||||||||||||    
T  33551739 gaaatcgccctcct 33551726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 16 - 129
Target Start/End: Complemental strand, 7270734 - 7270621
Alignment:
Q  16 cagacctaatttctaagagatttaactactcataatcgtgtttacaaataacataatcaatatatgaattaaaacatacatgaactggtaaaaggttgaa 115  Q
    |||||||||| ||||||||||||| ||||||||||| | ||||||||||| |||||||||||   |||| ||||||||||||||||| || |||||||||    
T  7270734 cagacctaatctctaagagatttagctactcataattgagtttacaaatagcataatcaatagtggaatcaaaacatacatgaactgatagaaggttgaa 7270635  T
Q  116 aaaatcgccctcct 129  Q
     |||||||||||||    
T  7270634 gaaatcgccctcct 7270621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 16 - 129
Target Start/End: Original strand, 26896008 - 26896121
Alignment:
Q  16 cagacctaatttctaagagatttaactactcataatcgtgtttacaaataacataatcaatatatgaattaaaacatacatgaactggtaaaaggttgaa 115  Q
    |||||||||| ||||||||||||| ||||||||||||| |||||||||||||||||||||||    ||| |||| ||||||||| ||||| |||||||||    
T  26896008 cagacctaatctctaagagatttagctactcataatcgagtttacaaataacataatcaatagtgaaatcaaaagatacatgaattggtagaaggttgaa 26896107  T
Q  116 aaaatcgccctcct 129  Q
     |||||||||||||    
T  26896108 gaaatcgccctcct 26896121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 16 - 129
Target Start/End: Original strand, 41306931 - 41307044
Alignment:
Q  16 cagacctaatttctaagagatttaactactcataatcgtgtttacaaataacataatcaatatatgaattaaaacatacatgaactggtaaaaggttgaa 115  Q
    |||||||||| ||||||||||||| ||||||||||| | ||||||||||| |||||||||||   |||| ||||||||||||||||| || |||||||||    
T  41306931 cagacctaatctctaagagatttagctactcataattgagtttacaaatagcataatcaatagtggaatcaaaacatacatgaactgatagaaggttgaa 41307030  T
Q  116 aaaatcgccctcct 129  Q
     |||||||||||||    
T  41307031 gaaatcgccctcct 41307044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 16 - 129
Target Start/End: Original strand, 41877169 - 41877282
Alignment:
Q  16 cagacctaatttctaagagatttaactactcataatcgtgtttacaaataacataatcaatatatgaattaaaacatacatgaactggtaaaaggttgaa 115  Q
    |||||||||| ||||||||||||| ||||||||||| | ||||||||||| |||||||||||   |||||||||||||||| ||||| || |||||||||    
T  41877169 cagacctaatctctaagagatttagctactcataattgagtttacaaatagcataatcaatagtggaattaaaacatacataaactgatagaaggttgaa 41877268  T
Q  116 aaaatcgccctcct 129  Q
     |||||||||||||    
T  41877269 gaaatcgccctcct 41877282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 16 - 129
Target Start/End: Original strand, 4099926 - 4100039
Alignment:
Q  16 cagacctaatttctaagagatttaactactcataatcgtgtttacaaataacataatcaatatatg-aattaaaacatacatgaactggtaaaaggttga 114  Q
    |||||||||| ||||||||||||| ||||||||||||| ||||||||||| ||||||||||| ||| ||| ||||||||||||||||| || ||||||||    
T  4099926 cagacctaatctctaagagatttatctactcataatcgagtttacaaatagcataatcaata-atgaaatcaaaacatacatgaactgatagaaggttga 4100024  T
Q  115 aaaaatcgccctcct 129  Q
    | || ||||||||||    
T  4100025 agaattcgccctcct 4100039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 16 - 129
Target Start/End: Original strand, 26753106 - 26753219
Alignment:
Q  16 cagacctaatttctaagagatttaactactcataatcgtgtttacaaataacataatcaatatatgaattaaaacatacatgaactggtaaaaggttgaa 115  Q
    |||||||||| ||||||||||||| ||||||||||| |  |||||||||| |||||||||||   |||| ||||||||||||||||| || |||||||||    
T  26753106 cagacctaatctctaagagatttagctactcataattgaatttacaaatatcataatcaatagtggaatcaaaacatacatgaactgatagaaggttgaa 26753205  T
Q  116 aaaatcgccctcct 129  Q
     |||||||||||||    
T  26753206 gaaatcgccctcct 26753219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 16 - 129
Target Start/End: Complemental strand, 30066060 - 30065947
Alignment:
Q  16 cagacctaatttctaagagatttaactactcataatcgtgtttacaaataacataatcaatatatgaattaaaacatacatgaactggtaaaaggttgaa 115  Q
    |||||||||| ||||||||||||| ||||||||||||| ||||||||||| |||||||| ||   |||| ||||| ||||||||||| || |||||||||    
T  30066060 cagacctaatctctaagagatttagctactcataatcgagtttacaaatagcataatcattaatggaatcaaaacttacatgaactgatagaaggttgaa 30065961  T
Q  116 aaaatcgccctcct 129  Q
     |||||||||||||    
T  30065960 gaaatcgccctcct 30065947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 16 - 129
Target Start/End: Complemental strand, 34831481 - 34831368
Alignment:
Q  16 cagacctaatttctaagagatttaactactcataatcgtgtttacaaataacataatcaatatatgaattaaaacatacatgaactggtaaaaggttgaa 115  Q
    |||||||||| ||||||||||||| ||||||||||| | ||||||||||| |||||||||||   |||| |||||||||||||| || || |||||||||    
T  34831481 cagacctaatctctaagagatttagctactcataattgagtttacaaatagcataatcaatagtggaatcaaaacatacatgaattgatagaaggttgaa 34831382  T
Q  116 aaaatcgccctcct 129  Q
     |||||||||||||    
T  34831381 gaaatcgccctcct 34831368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 16 - 129
Target Start/End: Complemental strand, 40582967 - 40582854
Alignment:
Q  16 cagacctaatttctaagagatttaactactcataatcgtgtttacaaataacataatcaatatatgaattaaaacatacatgaactggtaaaaggttgaa 115  Q
    |||||||||  |||||  |||||| ||||||||||| |||||||||||||||||||||| || | |||| || |||||||||||||||||||||  ||||    
T  40582967 cagacctaacctctaatggatttagctactcataatggtgtttacaaataacataatcattagaggaatcaatacatacatgaactggtaaaagagtgaa 40582868  T
Q  116 aaaatcgccctcct 129  Q
     |||||||||||||    
T  40582867 gaaatcgccctcct 40582854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 16 - 131
Target Start/End: Original strand, 34143618 - 34143733
Alignment:
Q  16 cagacctaatttctaagagatttaactactcataatcgtgtttacaaataacataatcaatatatgaattaaaacatacatgaactggtaaaaggttgaa 115  Q
    |||||||||  |||||  |||||| ||||||||||| |||||||||||||||||||||| || | |||| || |||||||||||||||||||||  ||||    
T  34143618 cagacctaacctctaatggatttagctactcataatggtgtttacaaataacataatcattagaggaatcaatacatacatgaactggtaaaagagtgaa 34143717  T
Q  116 aaaatcgccctccttg 131  Q
     |||||||||| ||||    
T  34143718 gaaatcgcccttcttg 34143733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 16 - 126
Target Start/End: Original strand, 12058896 - 12059006
Alignment:
Q  16 cagacctaatttctaagagatttaactactcataatcgtgtttacaaataacataatcaatatatgaattaaaacatacatgaactggtaaaaggttgaa 115  Q
    |||||||||  |||||  |||||| ||||||||||| |||||||||||||||||||||| || | |||| || |||||||||||||||||||||  ||||    
T  12058896 cagacctaacctctaatggatttagctactcataatggtgtttacaaataacataatcattagaggaatcaatacatacatgaactggtaaaagagtgaa 12058995  T
Q  116 aaaatcgccct 126  Q
     ||||||||||    
T  12058996 gaaatcgccct 12059006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 16 - 126
Target Start/End: Complemental strand, 17748158 - 17748048
Alignment:
Q  16 cagacctaatttctaagagatttaactactcataatcgtgtttacaaataacataatcaatatatgaattaaaacatacatgaactggtaaaaggttgaa 115  Q
    |||||||||  |||||  |||||| ||||||||||| |||||||||||||||||||||| || | |||| || |||||||||||||||||||||  ||||    
T  17748158 cagacctaacctctaatggatttagctactcataatggtgtttacaaataacataatcattagaggaatcaatacatacatgaactggtaaaagagtgaa 17748059  T
Q  116 aaaatcgccct 126  Q
     ||||||||||    
T  17748058 gaaatcgccct 17748048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 34 - 131
Target Start/End: Complemental strand, 12087658 - 12087561
Alignment:
Q  34 gatttaactactcataatcgtgtttacaaataacataatcaatatatgaattaaaacatacatgaactggtaaaaggttgaaaaaatcgccctccttg 131  Q
    |||||| ||||||||||| |||||||||||||||||||||| || | |||| || |||||||||||||||||||||  |||| |||||||||| ||||    
T  12087658 gatttagctactcataatggtgtttacaaataacataatcattagaggaatcaatacatacatgaactggtaaaagagtgaagaaatcgcccttcttg 12087561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 16 - 121
Target Start/End: Complemental strand, 18032176 - 18032071
Alignment:
Q  16 cagacctaatttctaagagatttaactactcataatcgtgtttacaaataacataatcaatatatgaattaaaacatacatgaactggtaaaaggttgaa 115  Q
    |||||||||| ||||||||||||| ||| ||||||||| ||||||||||| |||||||||||   |||| ||||||||||| ||||| || |||||||||    
T  18032176 cagacctaatctctaagagatttagctattcataatcgagtttacaaatagcataatcaatagtggaatcaaaacatacatcaactgatagaaggttgaa 18032077  T
Q  116 aaaatc 121  Q
     |||||    
T  18032076 gaaatc 18032071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 16 - 129
Target Start/End: Complemental strand, 23043883 - 23043770
Alignment:
Q  16 cagacctaatttctaagagatttaactactcataatcgtgtttacaaataacataatcaatatatgaattaaaacatacatgaactggtaaaaggttgaa 115  Q
    |||||||||  |||||  |||||| ||||||||||| |||||||||||||||||||||| || | |||| || |||||||||||| ||||||||| ||||    
T  23043883 cagacctaacctctaatggatttagctactcataatggtgtttacaaataacataatcattagaggaatcaatacatacatgaacaggtaaaaggatgaa 23043784  T
Q  116 aaaatcgccctcct 129  Q
     ||||| |||||||    
T  23043783 gaaatctccctcct 23043770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 16 - 103
Target Start/End: Complemental strand, 7624820 - 7624733
Alignment:
Q  16 cagacctaatttctaagagatttaactactcataatcgtgtttacaaataacataatcaatatatgaattaaaacatacatgaactgg 103  Q
    |||||||||| ||||||||||||| ||||||||||| | ||||||||||| ||||||||||  | |||||||||||||||| ||||||    
T  7624820 cagacctaatctctaagagatttagctactcataattgagtttacaaatagcataatcaatggaagaattaaaacatacataaactgg 7624733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 16 - 107
Target Start/End: Complemental strand, 17664270 - 17664179
Alignment:
Q  16 cagacctaatttctaagagatttaactactcataatcgtgtttacaaataacataatcaatatatgaattaaaacatacatgaactggtaaa 107  Q
    |||||||||| ||||||||||||| ||||||||||| | ||||||||||| ||||||||||  | |||||||||||||||| ||||| ||||    
T  17664270 cagacctaatctctaagagatttagctactcataattgagtttacaaatagcataatcaatgaaagaattaaaacatacataaactgataaa 17664179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 16 - 107
Target Start/End: Complemental strand, 20055492 - 20055401
Alignment:
Q  16 cagacctaatttctaagagatttaactactcataatcgtgtttacaaataacataatcaatatatgaattaaaacatacatgaactggtaaa 107  Q
    |||||||||| ||||||||||||| ||||||||||| | |||||||||||  |||||||||  | |||||||||||||||| ||||||||||    
T  20055492 cagacctaatctctaagagatttagctactcataattgagtttacaaatagaataatcaatgaaagaattaaaacatacataaactggtaaa 20055401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 16 - 131
Target Start/End: Original strand, 34133387 - 34133502
Alignment:
Q  16 cagacctaatttctaagagatttaactactcataatcgtgtttacaaataacataatcaatatatgaattaaaacatacatgaactggtaaaaggttgaa 115  Q
    |||||||||  |||||  |||||| ||||||||||| |||||||||||||||||||||| || | |||| || |||||||||||||||||||||  | ||    
T  34133387 cagacctaacctctaatggatttagctactcataatggtgtttacaaataacataatcattagaggaatcaatacatacatgaactggtaaaagagtaaa 34133486  T
Q  116 aaaatcgccctccttg 131  Q
     |||||||||| ||||    
T  34133487 gaaatcgcccttcttg 34133502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 16 - 102
Target Start/End: Complemental strand, 22129983 - 22129897
Alignment:
Q  16 cagacctaatttctaagagatttaactactcataatcgtgtttacaaataacataatcaatatatgaattaaaacatacatgaactg 102  Q
    |||||||||| ||||||||||||| ||||||||||||| ||||||||||| ||||||||||  |  ||||||||| |||||||||||    
T  22129983 cagacctaatctctaagagatttagctactcataatcgagtttacaaatagcataatcaatgaaataattaaaacgtacatgaactg 22129897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 16 - 103
Target Start/End: Original strand, 14016543 - 14016630
Alignment:
Q  16 cagacctaatttctaagagatttaactactcataatcgtgtttacaaataacataatcaatatatgaattaaaacatacatgaactgg 103  Q
    |||||||||| ||||||||||||| ||||||||||| | ||||||||||| ||||||||||  |  ||||||||||||||| ||||||    
T  14016543 cagacctaatctctaagagatttagctactcataattgagtttacaaatagcataatcaatggaaaaattaaaacatacataaactgg 14016630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 16 - 126
Target Start/End: Original strand, 26907859 - 26907969
Alignment:
Q  16 cagacctaatttctaagagatttaactactcataatcgtgtttacaaataacataatcaatatatgaattaaaacatacatgaactggtaaaaggttgaa 115  Q
    |||||||||  |||||  |||||| ||| ||||||| |||||||||||||||||||||| || | |||| || |||||||||||||||||||||  ||||    
T  26907859 cagacctaacctctaatggatttagctaatcataatggtgtttacaaataacataatcattagaggaatcaatacatacatgaactggtaaaagagtgaa 26907958  T
Q  116 aaaatcgccct 126  Q
     ||||| ||||    
T  26907959 gaaatcaccct 26907969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 16 - 129
Target Start/End: Complemental strand, 26292509 - 26292396
Alignment:
Q  16 cagacctaatttctaagagatttaactactcataatcgtgtttacaaataacataatcaatatatgaattaaaacatacatgaactggtaaaaggttgaa 115  Q
    |||||||||  |||||  |||||| ||||||||||| ||||||| |||||||||||||| || | |||| || ||||||||||||  |||||||| ||||    
T  26292509 cagacctaacctctaatggatttagctactcataatggtgtttaaaaataacataatcattagaggaatcaatacatacatgaacaagtaaaaggatgaa 26292410  T
Q  116 aaaatcgccctcct 129  Q
     |||| ||||||||    
T  26292409 gaaattgccctcct 26292396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 55 - 129
Target Start/End: Complemental strand, 2837053 - 2836979
Alignment:
Q  55 gtttacaaataacataatcaatatatgaattaaaacatacatgaactggtaaaaggttgaaaaaatcgccctcct 129  Q
    ||||||||||| |||||||||||   |||| ||||||||||||||||| || ||||||||| || ||||||||||    
T  2837053 gtttacaaatagcataatcaataatggaatcaaaacatacatgaactgatagaaggttgaagaattcgccctcct 2836979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 16 - 96
Target Start/End: Complemental strand, 31575135 - 31575055
Alignment:
Q  16 cagacctaatttctaagagatttaactactcataatcgtgtttacaaataacataatcaatatatgaattaaaacatacat 96  Q
    |||||||| | | ||||||||||||| ||||||||| |   ||||||||||||||||||||  |  |||||||||||||||    
T  31575135 cagacctactctttaagagatttaacaactcataattgaaattacaaataacataatcaatggaataattaaaacatacat 31575055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0066 (Bit Score: 70; Significance: 1e-31; HSPs: 1)
Name: scaffold0066
Description:

Target: scaffold0066; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 16 - 129
Target Start/End: Original strand, 57994 - 58107
Alignment:
Q  16 cagacctaatttctaagagatttaactactcataatcgtgtttacaaataacataatcaatatatgaattaaaacatacatgaactggtaaaaggttgaa 115  Q
    |||||||||| ||||||| ||||| ||||||||||||| |||||||||||| |||||||||||| |||| |||||||||||||||| |||||||||| ||    
T  57994 cagacctaatatctaagatatttagctactcataatcgggtttacaaataatataatcaatataggaatcaaaacatacatgaactagtaaaaggttaaa 58093  T
Q  116 aaaatcgccctcct 129  Q
     |||||| ||||||    
T  58094 gaaatcgtcctcct 58107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0427 (Bit Score: 66; Significance: 3e-29; HSPs: 1)
Name: scaffold0427
Description:

Target: scaffold0427; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 16 - 129
Target Start/End: Original strand, 4193 - 4306
Alignment:
Q  16 cagacctaatttctaagagatttaactactcataatcgtgtttacaaataacataatcaatatatgaattaaaacatacatgaactggtaaaaggttgaa 115  Q
    |||||||||| ||||||||||||| ||||||||||| | ||||||||||| |||||||||||   |||| ||||||||||||||||| || |||||||||    
T  4193 cagacctaatctctaagagatttagctactcataattgagtttacaaatagcataatcaatagtggaatcaaaacatacatgaactgatagaaggttgaa 4292  T
Q  116 aaaatcgccctcct 129  Q
     |||||||||||||    
T  4293 gaaatcgccctcct 4306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 63; Significance: 2e-27; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 16 - 126
Target Start/End: Complemental strand, 84958 - 84848
Alignment:
Q  16 cagacctaatttctaagagatttaactactcataatcgtgtttacaaataacataatcaatatatgaattaaaacatacatgaactggtaaaaggttgaa 115  Q
    |||||||||| ||||||||||||| ||||||||||| | ||||||||||| |||||||||||   |||| ||||||||||||||||| || |||||||||    
T  84958 cagacctaatctctaagagatttagctactcataattgagtttacaaatagcataatcaatagtggaatcaaaacatacatgaactgatagaaggttgaa 84859  T
Q  116 aaaatcgccct 126  Q
     ||||||||||    
T  84858 gaaatcgccct 84848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 63; Significance: 2e-27; HSPs: 20)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 16 - 126
Target Start/End: Complemental strand, 2560304 - 2560194
Alignment:
Q  16 cagacctaatttctaagagatttaactactcataatcgtgtttacaaataacataatcaatatatgaattaaaacatacatgaactggtaaaaggttgaa 115  Q
    |||||||||  ||||||||||||| ||||||||||| ||||||||||||||||||||||||| | |||| || ||||||||||||| |||||||  ||||    
T  2560304 cagacctaacctctaagagatttagctactcataatggtgtttacaaataacataatcaataaaggaatcaatacatacatgaactcgtaaaagagtgaa 2560205  T
Q  116 aaaatcgccct 126  Q
     ||||||||||    
T  2560204 gaaatcgccct 2560194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 16 - 129
Target Start/End: Complemental strand, 16953491 - 16953378
Alignment:
Q  16 cagacctaatttctaagagatttaactactcataatcgtgtttacaaataacataatcaatatatgaattaaaacatacatgaactggtaaaaggttgaa 115  Q
    |||||||||| ||||||||||||| ||||||||||| | ||||||||||| |||||||||||   |||| ||||||||| ||||||| || |||||||||    
T  16953491 cagacctaatctctaagagatttagctactcataattgagtttacaaatagcataatcaatagtggaatcaaaacatacgtgaactgatagaaggttgaa 16953392  T
Q  116 aaaatcgccctcct 129  Q
     |||||||||||||    
T  16953391 gaaatcgccctcct 16953378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 28 - 129
Target Start/End: Original strand, 21280184 - 21280285
Alignment:
Q  28 ctaagagatttaactactcataatcgtgtttacaaataacataatcaatatatgaattaaaacatacatgaactggtaaaaggttgaaaaaatcgccctc 127  Q
    |||||||||||| ||||||||||||| ||||||||||||||||||||||||| |||| || |||||||||||  ||||||||| |||| ||||| |||||    
T  21280184 ctaagagatttagctactcataatcgagtttacaaataacataatcaatataggaatcaatacatacatgaaaaggtaaaaggatgaagaaatcaccctc 21280283  T
Q  128 ct 129  Q
    ||    
T  21280284 ct 21280285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 27 - 126
Target Start/End: Original strand, 38248815 - 38248914
Alignment:
Q  27 tctaagagatttaactactcataatcgtgtttacaaataacataatcaatatatgaattaaaacatacatgaactggtaaaaggttgaaaaaatcgccct 126  Q
    ||||||||||||| ||||||||||| | ||||||||||| |||||||||||   ||||||||||||||||||||| ||| ||||||||| ||||||||||    
T  38248815 tctaagagatttagctactcataattgagtttacaaatagcataatcaataatggaattaaaacatacatgaactagtacaaggttgaagaaatcgccct 38248914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 16 - 129
Target Start/End: Original strand, 5980717 - 5980830
Alignment:
Q  16 cagacctaatttctaagagatttaactactcataatcgtgtttacaaataacataatcaatatatgaattaaaacatacatgaactggtaaaaggttgaa 115  Q
    ||||||||||  |||||||||||| ||||||||||||| ||||||||||| |||||||||||   |||| |||||||||| ||| || || |||||||||    
T  5980717 cagacctaatccctaagagatttagctactcataatcgagtttacaaatagcataatcaatagtagaatcaaaacatacacgaattgatagaaggttgaa 5980816  T
Q  116 aaaatcgccctcct 129  Q
     |||||||||||||    
T  5980817 gaaatcgccctcct 5980830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 16 - 129
Target Start/End: Complemental strand, 12582723 - 12582610
Alignment:
Q  16 cagacctaatttctaagagatttaactactcataatcgtgtttacaaataacataatcaatatatgaattaaaacatacatgaactggtaaaaggttgaa 115  Q
    |||||||||| ||||||||||||| ||||||||||||| ||||||||||| |||||||||||   | || || |||||||||||| ||||||||| ||||    
T  12582723 cagacctaatctctaagagatttagctactcataatcgagtttacaaatagcataatcaataatgggatcaatacatacatgaacaggtaaaaggatgaa 12582624  T
Q  116 aaaatcgccctcct 129  Q
     ||||| |||||||    
T  12582623 gaaatctccctcct 12582610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 16 - 131
Target Start/End: Original strand, 23620711 - 23620826
Alignment:
Q  16 cagacctaatttctaagagatttaactactcataatcgtgtttacaaataacataatcaatatatgaattaaaacatacatgaactggtaaaaggttgaa 115  Q
    |||||||||  |||||  |||||| ||||||||||| |||||||||||||||||||||| || | |||| || |||||||||||||||||||||  ||||    
T  23620711 cagacctaacctctaatggatttagctactcataatggtgtttacaaataacataatcattagaggaatcaatacatacatgaactggtaaaagagtgaa 23620810  T
Q  116 aaaatcgccctccttg 131  Q
     |||||||||| ||||    
T  23620811 gaaatcgcccttcttg 23620826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 16 - 126
Target Start/End: Complemental strand, 8911362 - 8911252
Alignment:
Q  16 cagacctaatttctaagagatttaactactcataatcgtgtttacaaataacataatcaatatatgaattaaaacatacatgaactggtaaaaggttgaa 115  Q
    |||||||||  |||||  |||||| ||||||||||| |||||||||||||||||||||| || | |||| || |||||||||||||||||||||  ||||    
T  8911362 cagacctaacctctaatggatttagctactcataatggtgtttacaaataacataatcattagaggaatcaatacatacatgaactggtaaaagagtgaa 8911263  T
Q  116 aaaatcgccct 126  Q
     ||||||||||    
T  8911262 gaaatcgccct 8911252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 16 - 129
Target Start/End: Original strand, 5614132 - 5614245
Alignment:
Q  16 cagacctaatttctaagagatttaactactcataatcgtgtttacaaataacataatcaatatatgaattaaaacatacatgaactggtaaaaggttgaa 115  Q
    |||||||||| ||||||||||||| ||||| ||||| | ||||||||||  ||||||||||  | |||||||||||||||||||||| | ||||| |||     
T  5614132 cagacctaatctctaagagatttagctacttataattgagtttacaaatggcataatcaatggaagaattaaaacatacatgaactgattaaaggatgat 5614231  T
Q  116 aaaatcgccctcct 129  Q
     |||||||||||||    
T  5614232 gaaatcgccctcct 5614245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 34 - 126
Target Start/End: Original strand, 10498636 - 10498728
Alignment:
Q  34 gatttaactactcataatcgtgtttacaaataacataatcaatatatgaattaaaacatacatgaactggtaaaaggttgaaaaaatcgccct 126  Q
    |||||| ||||||||||| |||||||||||||||||||||| || | |||| || |||||||||||||||||||||  |||| ||||||||||    
T  10498636 gatttagctactcataatggtgtttacaaataacataatcattagaggaatcaatacatacatgaactggtaaaagagtgaagaaatcgccct 10498728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 16 - 103
Target Start/End: Original strand, 22174328 - 22174415
Alignment:
Q  16 cagacctaatttctaagagatttaactactcataatcgtgtttacaaataacataatcaatatatgaattaaaacatacatgaactgg 103  Q
    |||||||||| ||||||||||||| ||||||||||| | |||||| |||| ||||||||||| | |||||||||||||||| ||||||    
T  22174328 cagacctaatctctaagagatttagctactcataattgagtttacgaatagcataatcaatagaagaattaaaacatacataaactgg 22174415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 16 - 103
Target Start/End: Original strand, 36711060 - 36711147
Alignment:
Q  16 cagacctaatttctaagagatttaactactcataatcgtgtttacaaataacataatcaatatatgaattaaaacatacatgaactgg 103  Q
    |||||||||| ||||||||||||| ||||||||||| | ||||||||||| ||||||||||  | |||||||||||||||| ||||||    
T  36711060 cagacctaatctctaagagatttagctactcataattgagtttacaaatagcataatcaatggaagaattaaaacatacataaactgg 36711147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 55 - 129
Target Start/End: Complemental strand, 13196524 - 13196450
Alignment:
Q  55 gtttacaaataacataatcaatatatgaattaaaacatacatgaactggtaaaaggttgaaaaaatcgccctcct 129  Q
    ||||||||||| ||||||||||||| ||||  ||||||||||||||| ||||||||||||| |||||||||||||    
T  13196524 gtttacaaatagcataatcaatataggaatccaaacatacatgaacttgtaaaaggttgaagaaatcgccctcct 13196450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 16 - 126
Target Start/End: Complemental strand, 31284385 - 31284275
Alignment:
Q  16 cagacctaatttctaagagatttaactactcataatcgtgtttacaaataacataatcaatatatgaattaaaacatacatgaactggtaaaaggttgaa 115  Q
    |||||||||  |||||  |||||| ||||||||||| |||||||||||||||||||||| || | |||| || ||||||||||| |||||||||  ||||    
T  31284385 cagacctaacctctaatggatttagctactcataatggtgtttacaaataacataatcattagaggaatcaatacatacatgaattggtaaaagagtgaa 31284286  T
Q  116 aaaatcgccct 126  Q
     ||||||||||    
T  31284285 gaaatcgccct 31284275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 16 - 103
Target Start/End: Original strand, 18824799 - 18824886
Alignment:
Q  16 cagacctaatttctaagagatttaactactcataatcgtgtttacaaataacataatcaatatatgaattaaaacatacatgaactgg 103  Q
    |||||||||| ||||||||||||| ||||||||||| | ||||||||||| ||||||||||  |  ||||||||||||||| ||||||    
T  18824799 cagacctaatctctaagagatttagctactcataattgagtttacaaatagcataatcaatggaaaaattaaaacatacataaactgg 18824886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 16 - 103
Target Start/End: Original strand, 18826292 - 18826379
Alignment:
Q  16 cagacctaatttctaagagatttaactactcataatcgtgtttacaaataacataatcaatatatgaattaaaacatacatgaactgg 103  Q
    |||||||||| ||||||||||||| ||||||||||| | ||||||||||| ||||||||||  |  ||||||||||||||| ||||||    
T  18826292 cagacctaatctctaagagatttagctactcataattgagtttacaaatagcataatcaatggaaaaattaaaacatacataaactgg 18826379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 21 - 107
Target Start/End: Complemental strand, 17930691 - 17930605
Alignment:
Q  21 ctaatttctaagagatttaactactcataatcgtgtttacaaataacataatcaatatatgaattaaaacatacatgaactggtaaa 107  Q
    ||||| ||||||||||||||||||||||| | | ||||||||||| ||||||||||  | |||||||||||||||| |||| |||||    
T  17930691 ctaatctctaagagatttaactactcatagttgagtttacaaatagcataatcaatgaaagaattaaaacatacataaactagtaaa 17930605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 16 - 102
Target Start/End: Original strand, 7944349 - 7944435
Alignment:
Q  16 cagacctaatttctaagagatttaactactcataatcgtgtttacaaataacataatcaatatatgaattaaaacatacatgaactg 102  Q
    |||||||||||||||| ||||||||||||||||||| |   ||||||||||||| ||||||  | | ||||||||| |||| |||||    
T  7944349 cagacctaatttctaatagatttaactactcataattggtattacaaataacatgatcaattgaagcattaaaacagacataaactg 7944435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 18 - 92
Target Start/End: Complemental strand, 30784643 - 30784569
Alignment:
Q  18 gacctaatttctaagagatttaactactcataatcgtgtttacaaataacataatcaatatatgaattaaaacat 92  Q
    |||||||  ||||||||||||| ||||||||||||| ||||||||||| ||||||||||  |  |||||||||||    
T  30784643 gacctaacctctaagagatttagctactcataatcgagtttacaaatagcataatcaatgaaataattaaaacat 30784569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 16 - 96
Target Start/End: Complemental strand, 33419371 - 33419291
Alignment:
Q  16 cagacctaatttctaagagatttaactactcataatcgtgtttacaaataacataatcaatatatgaattaaaacatacat 96  Q
    |||||||||  |||||  |||||| ||||||||||| ||||||| |||||||||||||| || | |||| || ||||||||    
T  33419371 cagacctaacctctaatggatttagctactcataatggtgtttataaataacataatcattagaggaatcaatacatacat 33419291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0250 (Bit Score: 60; Significance: 1e-25; HSPs: 1)
Name: scaffold0250
Description:

Target: scaffold0250; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 19 - 126
Target Start/End: Complemental strand, 19110 - 19003
Alignment:
Q  19 acctaatttctaagagatttaactactcataatcgtgtttacaaataacataatcaatatatgaattaaaacatacatgaactggtaaaaggttgaaaaa 118  Q
    ||||||| ||||||||||||| ||||||||||| | ||||||||||| |||||||||||   |||||||||||||||| ||||| || ||||||||| ||    
T  19110 acctaatctctaagagatttagctactcataattgagtttacaaatagcataatcaatagtggaattaaaacatacataaactgatagaaggttgaagaa 19011  T
Q  119 atcgccct 126  Q
    ||||||||    
T  19010 atcgccct 19003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0520 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0520
Description:

Target: scaffold0520; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 16 - 129
Target Start/End: Original strand, 4384 - 4497
Alignment:
Q  16 cagacctaatttctaagagatttaactactcataatcgtgtttacaaataacataatcaatatatgaattaaaacatacatgaactggtaaaaggttgaa 115  Q
    |||||||||| ||||||||||||| ||||||| ||| | ||||||||||| |||||||||||   |||| ||||||||||||||||| || |||||||||    
T  4384 cagacctaatctctaagagatttagctactcaaaattgagtttacaaatagcataatcaatagtggaatcaaaacatacatgaactgatagaaggttgaa 4483  T
Q  116 aaaatcgccctcct 129  Q
     |||| ||||||||    
T  4484 gaaattgccctcct 4497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0065 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0065
Description:

Target: scaffold0065; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 16 - 129
Target Start/End: Original strand, 59087 - 59200
Alignment:
Q  16 cagacctaatttctaagagatttaactactcataatcgtgtttacaaataacataatcaatatatgaattaaaacatacatgaactggtaaaaggttgaa 115  Q
    |||||||||  |||||  |||||| ||||||||||| |||||||||||||||||||||| || | |||| || |||||||||||| ||||||||| ||||    
T  59087 cagacctaacctctaacggatttagctactcataatggtgtttacaaataacataatcattagaggaatcaatacatacatgaacaggtaaaaggatgaa 59186  T
Q  116 aaaatcgccctcct 129  Q
     |||||||||||||    
T  59187 gaaatcgccctcct 59200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 16 - 126
Target Start/End: Complemental strand, 30812 - 30702
Alignment:
Q  16 cagacctaatttctaagagatttaactactcataatcgtgtttacaaataacataatcaatatatgaattaaaacatacatgaactggtaaaaggttgaa 115  Q
    |||||||||  |||||  |||||| ||||||||||| |||||||||||||||||||||| || | |||| || |||||||||||||||||||||  ||||    
T  30812 cagacctaacctctaatggatttagctactcataatggtgtttacaaataacataatcattagaggaatcaatacatacatgaactggtaaaagagtgaa 30713  T
Q  116 aaaatcgccct 126  Q
     ||||||||||    
T  30712 gaaatcgccct 30702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0757 (Bit Score: 54; Significance: 4e-22; HSPs: 1)
Name: scaffold0757
Description:

Target: scaffold0757; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 16 - 129
Target Start/End: Complemental strand, 5070 - 4957
Alignment:
Q  16 cagacctaatttctaagagatttaactactcataatcgtgtttacaaataacataatcaatatatgaattaaaacatacatgaactggtaaaaggttgaa 115  Q
    |||||||||| ||||||||||||| ||||||||||||| ||| ||||||| |||||||||||   |||| ||||||||||||||||  || |||||||||    
T  5070 cagacctaatctctaagagatttagctactcataatcgagttaacaaatagcataatcaataatggaatcaaaacatacatgaactcatagaaggttgaa 4971  T
Q  116 aaaatcgccctcct 129  Q
     || || |||||||    
T  4970 gaattctccctcct 4957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1684 (Bit Score: 52; Significance: 6e-21; HSPs: 1)
Name: scaffold1684
Description:

Target: scaffold1684; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 16 - 103
Target Start/End: Original strand, 45 - 132
Alignment:
Q  16 cagacctaatttctaagagatttaactactcataatcgtgtttacaaataacataatcaatatatgaattaaaacatacatgaactgg 103  Q
    |||||||||| ||||||||||||| ||||||||||| | ||||||||||| ||||||||||  | |||||||||||||||| ||||||    
T  45 cagacctaatctctaagagatttagctactcataattgagtttacaaatagcataatcaatggaagaattaaaacatacataaactgg 132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0084 (Bit Score: 52; Significance: 6e-21; HSPs: 2)
Name: scaffold0084
Description:

Target: scaffold0084; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 16 - 131
Target Start/End: Complemental strand, 19013 - 18898
Alignment:
Q  16 cagacctaatttctaagagatttaactactcataatcgtgtttacaaataacataatcaatatatgaattaaaacatacatgaactggtaaaaggttgaa 115  Q
    |||||||||  |||||  |||||| ||||||||||| |||||||||||||||||||||| || | |||| || |||||||||||||||||||||  ||||    
T  19013 cagacctaacctctaatggatttagctactcataatggtgtttacaaataacataatcattagaggaatcaatacatacatgaactggtaaaagagtgaa 18914  T
Q  116 aaaatcgccctccttg 131  Q
     ||||| |||| ||||    
T  18913 gaaatctcccttcttg 18898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0084; HSP #2
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 16 - 131
Target Start/End: Complemental strand, 29083 - 28968
Alignment:
Q  16 cagacctaatttctaagagatttaactactcataatcgtgtttacaaataacataatcaatatatgaattaaaacatacatgaactggtaaaaggttgaa 115  Q
    |||||||||  |||||  |||||| ||||||||||| |||||||||||||||||||||| || | |||| || |||||||||||||  ||||||  ||||    
T  29083 cagacctaacctctaatggatttagctactcataatggtgtttacaaataacataatcattagaggaatcaatacatacatgaactcttaaaagagtgaa 28984  T
Q  116 aaaatcgccctccttg 131  Q
     |||||||||| ||||    
T  28983 gaaatcgcccttcttg 28968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045 (Bit Score: 52; Significance: 6e-21; HSPs: 1)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 16 - 103
Target Start/End: Complemental strand, 89487 - 89400
Alignment:
Q  16 cagacctaatttctaagagatttaactactcataatcgtgtttacaaataacataatcaatatatgaattaaaacatacatgaactgg 103  Q
    |||||||||| ||||||||||||| ||||||||||| | ||||||||||| ||||||||||  | |||||||||||||||| ||||||    
T  89487 cagacctaatctctaagagatttagctactcataattgagtttacaaatagcataatcaattgaagaattaaaacatacataaactgg 89400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0191 (Bit Score: 51; Significance: 2e-20; HSPs: 1)
Name: scaffold0191
Description:

Target: scaffold0191; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 35 - 129
Target Start/End: Complemental strand, 1445 - 1351
Alignment:
Q  35 atttaactactcataatcgtgtttacaaataacataatcaatatatgaattaaaacatacatgaactggtaaaaggttgaaaaaatcgccctcct 129  Q
    ||||| ||||||||||| |||||||||||||||||||||| || | |||| || |||||||||||  ||||||||| |||| |||||||||||||    
T  1445 atttagctactcataatggtgtttacaaataacataatcattagaggaatcaatacatacatgaaagggtaaaaggatgaagaaatcgccctcct 1351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 18 - 102
Target Start/End: Original strand, 118853 - 118937
Alignment:
Q  18 gacctaatttctaagagatttaactactcataatcgtgtttacaaataacataatcaatatatgaattaaaacatacatgaactg 102  Q
    |||||||| ||||||||||||| ||||||||||||| ||||||||||| ||||||||||  |  |||||| ||||||||||||||    
T  118853 gacctaatctctaagagatttagctactcataatcgagtttacaaatagcataatcaatgaaataattaacacatacatgaactg 118937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0233 (Bit Score: 48; Significance: 1e-18; HSPs: 1)
Name: scaffold0233
Description:

Target: scaffold0233; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 16 - 107
Target Start/End: Complemental strand, 9655 - 9564
Alignment:
Q  16 cagacctaatttctaagagatttaactactcataatcgtgtttacaaataacataatcaatatatgaattaaaacatacatgaactggtaaa 107  Q
    |||||||||| ||||||||||||| ||||||||||| | ||||||||||| ||||||||||  | ||||||||| |||||| ||| ||||||    
T  9655 cagacctaatatctaagagatttagctactcataattgagtttacaaatagcataatcaattaaagaattaaaatatacatcaaccggtaaa 9564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056 (Bit Score: 48; Significance: 1e-18; HSPs: 1)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 16 - 127
Target Start/End: Original strand, 67929 - 68040
Alignment:
Q  16 cagacctaatttctaagagatttaactactcataatcgtgtttacaaataacataatcaatatatgaattaaaacatacatgaactggtaaaaggttgaa 115  Q
    |||||||||  |||||  |||||  ||||||| ||| |||||||||||||||||||||| || | |||| || |||||||||||||||||||||  ||||    
T  67929 cagacctaacctctaatggatttggctactcaaaatggtgtttacaaataacataatcattagaggaatcaatacatacatgaactggtaaaagagtgaa 68028  T
Q  116 aaaatcgccctc 127  Q
     |||||||||||    
T  68029 gaaatcgccctc 68040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0048 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0048
Description:

Target: scaffold0048; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 16 - 109
Target Start/End: Complemental strand, 24539 - 24446
Alignment:
Q  16 cagacctaatttctaagagatttaactactcataatcgtgtttacaaataacataatcaatatatgaattaaaacatacatgaactggtaaaag 109  Q
    |||||||||  |||||  |||||| ||||||||||| |||||||||||||||||||||| || | |||| || ||||||||||||| |||||||    
T  24539 cagacctaacctctaatggatttagctactcataatggtgtttacaaataacataatcattagaggaataaatacatacatgaactagtaaaag 24446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0321 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0321
Description:

Target: scaffold0321; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 34 - 107
Target Start/End: Original strand, 3434 - 3507
Alignment:
Q  34 gatttaactactcataatcgtgtttacaaataacataatcaatatatgaattaaaacatacatgaactggtaaa 107  Q
    |||||| ||||||||||| |||||||||||||||||||||| || | |||| || |||||||||| ||||||||    
T  3434 gatttagctactcataatggtgtttacaaataacataatcattagaggaatcaatacatacatgatctggtaaa 3507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0126 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0126
Description:

Target: scaffold0126; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 19 - 76
Target Start/End: Original strand, 82 - 139
Alignment:
Q  19 acctaatttctaagagatttaactactcataatcgtgtttacaaataacataatcaat 76  Q
    ||||||||||||||||||||| ||||||||||| | ||||||||||| ||||||||||    
T  82 acctaatttctaagagatttagctactcataattgagtttacaaatagcataatcaat 139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 19 - 102
Target Start/End: Original strand, 48810 - 48893
Alignment:
Q  19 acctaatttctaagagatttaactactcataatcgtgtttacaaataacataatcaatatatgaattaaaacatacatgaactg 102  Q
    ||||||| ||||||||||||| | ||||||||| ||  ||||||||| ||||||||||  | |||||||||||||||| |||||    
T  48810 acctaatctctaagagatttagccactcataattgtaattacaaatagcataatcaatggaagaattaaaacatacataaactg 48893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 2)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 126 - 200
Target Start/End: Original strand, 34880 - 34954
Alignment:
Q  126 tccttgttttcgaaataagcttcagaataaataggcacagaaaatcgcccaatcatgtcacgattttagtaaatc 200  Q
    ||||||||||   |||||||||||| ||||||||||||| ||| ||||| |||| ||||||||||| ||||||||    
T  34880 tccttgtttttagaataagcttcagtataaataggcacaaaaattcgccgaatcgtgtcacgatttaagtaaatc 34954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 81 - 110
Target Start/End: Original strand, 34783 - 34812
Alignment:
Q  81 gaattaaaacatacatgaactggtaaaagg 110  Q
    ||||||||||||||||||||||||||||||    
T  34783 gaattaaaacatacatgaactggtaaaagg 34812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0807 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0807
Description:

Target: scaffold0807; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 16 - 129
Target Start/End: Original strand, 2477 - 2590
Alignment:
Q  16 cagacctaatttctaagagatttaactactcataatcgtgtttacaaataacataatcaatatatgaattaaaacatacatgaactggtaaaaggttgaa 115  Q
    |||||||||  |||||  || ||| ||||||||||| |||||||||||||||||||||| || |  ||| || |||| || |||| ||||||||| ||||    
T  2477 cagacctaacctctaatggacttagctactcataatggtgtttacaaataacataatcattagaataatcaatacattcacgaacaggtaaaaggatgaa 2576  T
Q  116 aaaatcgccctcct 129  Q
     ||||| |||||||    
T  2577 gaaatctccctcct 2590  T

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Target: scaffold1785 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold1785
Description:

Target: scaffold1785; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 58 - 124
Target Start/End: Complemental strand, 971 - 905
Alignment:
Q  58 tacaaataacataatcaatatatgaattaaaacatacatgaactggtaaaaggttgaaaaaatcgcc 124  Q
    ||||||||||||||||| || | |||| || |||||||||||| ||||||||| |||| ||||||||    
T  971 tacaaataacataatcattagaggaatcaatacatacatgaacaggtaaaaggatgaagaaatcgcc 905  T

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Target: scaffold0035 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 58 - 124
Target Start/End: Complemental strand, 63581 - 63515
Alignment:
Q  58 tacaaataacataatcaatatatgaattaaaacatacatgaactggtaaaaggttgaaaaaatcgcc 124  Q
    ||||||||||||||||| || | |||| || |||||||||||| ||||||||| |||| ||||||||    
T  63581 tacaaataacataatcattagaggaatcaatacatacatgaacaggtaaaaggatgaagaaatcgcc 63515  T

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Target: scaffold0187 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0187
Description:

Target: scaffold0187; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 16 - 48
Target Start/End: Complemental strand, 31427 - 31395
Alignment:
Q  16 cagacctaatttctaagagatttaactactcat 48  Q
    |||||||||| ||||||||||||||||||||||    
T  31427 cagacctaatctctaagagatttaactactcat 31395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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