View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF15378_low_23 (Length: 272)

Name: NF15378_low_23
Description: NF15378
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF15378_low_23
NF15378_low_23
[»] chr4 (71 HSPs)
chr4 (40-183)||(18491186-18491329)
chr4 (40-183)||(40228446-40228590)
chr4 (40-183)||(11650982-11651125)
chr4 (40-181)||(2654926-2655067)
chr4 (40-183)||(6755828-6755971)
chr4 (34-183)||(44817559-44817708)
chr4 (40-185)||(13233227-13233372)
chr4 (32-184)||(19653652-19653804)
chr4 (32-184)||(31581758-31581910)
chr4 (40-182)||(44745606-44745748)
chr4 (40-185)||(36955026-36955171)
chr4 (40-183)||(44134493-44134635)
chr4 (40-183)||(31664183-31664322)
chr4 (40-184)||(43564416-43564560)
chr4 (40-183)||(16925106-16925248)
chr4 (40-183)||(36584423-36584565)
chr4 (40-174)||(13613108-13613241)
chr4 (40-180)||(38141573-38141714)
chr4 (183-268)||(1326003-1326088)
chr4 (48-185)||(27270351-27270487)
chr4 (40-136)||(45670006-45670102)
chr4 (40-183)||(52581455-52581598)
chr4 (40-127)||(12700584-12700671)
chr4 (40-139)||(41832419-41832518)
chr4 (53-183)||(51001475-51001605)
chr4 (40-183)||(22647110-22647253)
chr4 (40-183)||(13869142-13869284)
chr4 (40-139)||(54795745-54795844)
chr4 (40-136)||(10096472-10096568)
chr4 (40-136)||(50767080-50767176)
chr4 (37-117)||(44134671-44134751)
chr4 (70-172)||(133361-133463)
chr4 (40-185)||(4632721-4632870)
chr4 (74-179)||(9046131-9046236)
chr4 (42-117)||(6756007-6756082)
chr4 (42-117)||(10096361-10096436)
chr4 (42-117)||(13233408-13233483)
chr4 (42-117)||(13612997-13613072)
chr4 (40-183)||(13857612-13857754)
chr4 (42-115)||(18491367-18491440)
chr4 (48-117)||(36584601-36584670)
chr4 (48-137)||(36801885-36801974)
chr4 (91-179)||(9024098-9024185)
chr4 (42-117)||(12700473-12700548)
chr4 (42-117)||(31581655-31581730)
chr4 (42-117)||(31664072-31664147)
chr4 (42-117)||(38141462-38141537)
chr4 (42-117)||(43564596-43564671)
chr4 (42-113)||(44745495-44745566)
chr4 (90-182)||(18668929-18669021)
chr4 (90-182)||(18714780-18714872)
chr4 (90-158)||(18735204-18735272)
chr4 (49-117)||(41832555-41832623)
chr4 (42-117)||(11650871-11650946)
chr4 (42-117)||(36954915-36954990)
chr4 (42-117)||(44817455-44817530)
chr4 (82-179)||(29006227-29006323)
chr4 (70-109)||(10393896-10393935)
chr4 (50-117)||(16925284-16925351)
chr4 (48-117)||(22647289-22647358)
chr4 (40-117)||(50767213-50767289)
chr4 (40-117)||(54795632-54795708)
chr4 (90-158)||(18707701-18707769)
chr4 (91-172)||(11975791-11975871)
chr4 (48-117)||(19653556-19653624)
chr4 (183-244)||(23633233-23633294)
chr4 (40-117)||(27270532-27270608)
chr4 (70-114)||(4632637-4632681)
chr4 (184-244)||(24539193-24539253)
chr4 (91-179)||(32151061-32151149)
chr4 (49-113)||(40228342-40228406)
[»] chr1 (75 HSPs)
chr1 (40-196)||(33012072-33012228)
chr1 (40-183)||(8530082-8530225)
chr1 (40-183)||(16692964-16693107)
chr1 (40-185)||(17285309-17285454)
chr1 (40-181)||(44052474-44052615)
chr1 (40-184)||(919725-919869)
chr1 (40-184)||(37125691-37125835)
chr1 (40-183)||(29169941-29170084)
chr1 (40-183)||(42371969-42372112)
chr1 (40-185)||(6849750-6849895)
chr1 (40-185)||(29981722-29981867)
chr1 (40-184)||(47561725-47561869)
chr1 (40-183)||(48708432-48708576)
chr1 (40-183)||(24790434-24790577)
chr1 (40-182)||(46224775-46224918)
chr1 (40-139)||(40428796-40428895)
chr1 (40-183)||(51139692-51139828)
chr1 (40-183)||(8086229-8086372)
chr1 (40-173)||(23177351-23177484)
chr1 (40-136)||(24544733-24544829)
chr1 (40-183)||(25299103-25299246)
chr1 (40-183)||(9042434-9042576)
chr1 (40-136)||(44317613-44317709)
chr1 (40-183)||(45836854-45836986)
chr1 (49-184)||(9246925-9247059)
chr1 (42-117)||(33011961-33012036)
chr1 (42-117)||(40567144-40567219)
chr1 (42-117)||(48708321-48708396)
chr1 (40-106)||(40567042-40567108)
chr1 (42-117)||(8086408-8086483)
chr1 (42-117)||(29981611-29981686)
chr1 (42-117)||(42372148-42372223)
chr1 (42-117)||(45837022-45837097)
chr1 (42-117)||(24790613-24790689)
chr1 (37-117)||(25298987-25299067)
chr1 (42-117)||(16692853-16692928)
chr1 (42-117)||(40428685-40428760)
chr1 (42-117)||(47561905-47561980)
chr1 (51-127)||(32540620-32540696)
chr1 (49-117)||(44052370-44052438)
chr1 (42-117)||(919614-919689)
chr1 (42-117)||(23177520-23177595)
chr1 (42-117)||(24542684-24542759)
chr1 (42-117)||(24542798-24542873)
chr1 (42-117)||(24542912-24542987)
chr1 (42-117)||(24543026-24543101)
chr1 (42-117)||(24543140-24543215)
chr1 (42-117)||(24543254-24543329)
chr1 (42-117)||(24543368-24543443)
chr1 (42-117)||(24543482-24543557)
chr1 (42-117)||(24543596-24543671)
chr1 (42-117)||(24543710-24543785)
chr1 (42-117)||(24543824-24543899)
chr1 (42-117)||(24543938-24544013)
chr1 (42-117)||(24544052-24544127)
chr1 (42-117)||(24544166-24544241)
chr1 (42-117)||(24544280-24544355)
chr1 (42-117)||(24544394-24544469)
chr1 (42-117)||(24544508-24544583)
chr1 (42-117)||(24544622-24544697)
chr1 (42-117)||(46224664-46224739)
chr1 (42-117)||(51139864-51139939)
chr1 (70-172)||(21852011-21852113)
chr1 (91-184)||(1243682-1243774)
chr1 (133-181)||(37343027-37343075)
chr1 (34-117)||(6849931-6850014)
chr1 (50-117)||(17285206-17285273)
chr1 (50-117)||(29170120-29170187)
chr1 (42-117)||(37125871-37125946)
chr1 (91-175)||(17879927-17880011)
chr1 (50-117)||(9042331-9042398)
chr1 (142-181)||(43532475-43532514)
chr1 (40-181)||(29055949-29056090)
chr1 (94-179)||(15841983-15842068)
chr1 (91-136)||(45807058-45807103)
[»] chr3 (52 HSPs)
chr3 (40-183)||(29126060-29126203)
chr3 (40-184)||(50527650-50527794)
chr3 (40-185)||(52201979-52202124)
chr3 (40-183)||(18163717-18163860)
chr3 (40-185)||(52571441-52571586)
chr3 (40-185)||(13594890-13595035)
chr3 (40-184)||(12251524-12251668)
chr3 (40-180)||(22729222-22729362)
chr3 (42-183)||(7160309-7160450)
chr3 (40-184)||(36633485-36633629)
chr3 (41-183)||(28952409-28952551)
chr3 (40-177)||(1092894-1093031)
chr3 (40-180)||(32270936-32271074)
chr3 (40-180)||(21259451-21259591)
chr3 (40-183)||(49169792-49169935)
chr3 (40-156)||(27742512-27742628)
chr3 (187-270)||(49453311-49453394)
chr3 (183-268)||(38362725-38362810)
chr3 (40-183)||(16908835-16908968)
chr3 (40-147)||(44205447-44205555)
chr3 (40-184)||(49657228-49657370)
chr3 (40-147)||(44254617-44254724)
chr3 (40-118)||(11232171-11232249)
chr3 (40-147)||(35083828-35083935)
chr3 (40-183)||(34660753-34660888)
chr3 (37-183)||(45045209-45045354)
chr3 (42-184)||(25246243-25246387)
chr3 (40-183)||(2618884-2619025)
chr3 (42-117)||(13594779-13594854)
chr3 (42-117)||(32270825-32270900)
chr3 (42-117)||(11232060-11232135)
chr3 (42-117)||(21259226-21259301)
chr3 (42-117)||(21259340-21259415)
chr3 (42-117)||(22729398-22729473)
chr3 (40-183)||(31174576-31174719)
chr3 (42-117)||(44254506-44254581)
chr3 (52-136)||(4618197-4618280)
chr3 (49-117)||(50527546-50527614)
chr3 (42-117)||(28952297-28952372)
chr3 (42-117)||(29125949-29126024)
chr3 (42-117)||(35083971-35084046)
chr3 (42-117)||(36633665-36633740)
chr3 (42-117)||(49657117-49657192)
chr3 (40-117)||(45045388-45045465)
chr3 (42-117)||(1092783-1092858)
chr3 (42-117)||(16908724-16908799)
chr3 (42-117)||(12251413-12251488)
chr3 (48-117)||(27742664-27742733)
chr3 (46-86)||(743958-743998)
chr3 (91-178)||(7441643-7441737)
chr3 (42-117)||(52202160-52202235)
chr3 (48-117)||(49169971-49170040)
[»] chr8 (62 HSPs)
chr8 (40-185)||(9830605-9830750)
chr8 (40-183)||(41837971-41838114)
chr8 (40-183)||(3886797-3886940)
chr8 (40-183)||(4231220-4231362)
chr8 (40-183)||(7012337-7012480)
chr8 (40-183)||(24797070-24797213)
chr8 (40-182)||(6316877-6317019)
chr8 (40-180)||(5590190-5590330)
chr8 (40-183)||(3659839-3659982)
chr8 (47-184)||(1098056-1098193)
chr8 (37-182)||(1183823-1183968)
chr8 (40-183)||(38567127-38567272)
chr8 (40-160)||(42556110-42556230)
chr8 (40-147)||(2317097-2317204)
chr8 (42-183)||(10092257-10092395)
chr8 (40-147)||(43117384-43117491)
chr8 (40-146)||(22658363-22658469)
chr8 (40-183)||(21434842-21434982)
chr8 (42-136)||(7242653-7242747)
chr8 (40-184)||(11635757-11635902)
chr8 (40-124)||(28564943-28565027)
chr8 (40-124)||(28572566-28572650)
chr8 (40-147)||(36060393-36060500)
chr8 (40-127)||(7413087-7413174)
chr8 (40-139)||(4697850-4697949)
chr8 (40-139)||(41388049-41388148)
chr8 (40-127)||(25642749-25642836)
chr8 (48-136)||(7422073-7422161)
chr8 (42-117)||(43117528-43117603)
chr8 (42-120)||(197265-197343)
chr8 (42-120)||(312102-312180)
chr8 (42-119)||(38567306-38567383)
chr8 (40-117)||(41169877-41169954)
chr8 (42-117)||(3886686-3886761)
chr8 (42-117)||(5590079-5590154)
chr8 (42-117)||(7242541-7242616)
chr8 (42-117)||(21435018-21435093)
chr8 (40-127)||(25383055-25383141)
chr8 (42-117)||(36060536-36060611)
chr8 (91-183)||(34934325-34934415)
chr8 (42-117)||(1184001-1184076)
chr8 (42-117)||(7012516-7012591)
chr8 (53-176)||(8996355-8996478)
chr8 (42-117)||(28565063-28565138)
chr8 (42-117)||(28572686-28572761)
chr8 (43-117)||(42556000-42556074)
chr8 (48-117)||(22658258-22658327)
chr8 (42-117)||(2317240-2317315)
chr8 (42-117)||(4231398-4231473)
chr8 (42-117)||(10092433-10092508)
chr8 (42-117)||(41388184-41388259)
chr8 (42-117)||(41837860-41837935)
chr8 (40-136)||(41169744-41169840)
chr8 (42-117)||(1098236-1098311)
chr8 (42-117)||(4697985-4698060)
chr8 (70-127)||(32018022-32018079)
chr8 (50-117)||(3659736-3659803)
chr8 (40-127)||(36108824-36108911)
chr8 (48-117)||(7413211-7413279)
chr8 (203-268)||(25629585-25629650)
chr8 (133-182)||(33979595-33979644)
chr8 (40-112)||(17836498-17836570)
[»] chr5 (46 HSPs)
chr5 (37-182)||(43358410-43358555)
chr5 (40-184)||(9737722-9737866)
chr5 (40-183)||(3631258-3631401)
chr5 (40-183)||(26525245-26525388)
chr5 (40-180)||(16823133-16823273)
chr5 (40-183)||(30772878-30773021)
chr5 (37-183)||(8074251-8074398)
chr5 (40-183)||(25701436-25701579)
chr5 (40-181)||(43348635-43348776)
chr5 (40-186)||(7440496-7440641)
chr5 (40-178)||(29390273-29390411)
chr5 (50-183)||(13013280-13013413)
chr5 (40-161)||(15374136-15374257)
chr5 (40-185)||(26297024-26297169)
chr5 (40-179)||(9596181-9596320)
chr5 (40-189)||(20486965-20487114)
chr5 (183-268)||(29379932-29380017)
chr5 (40-184)||(41084597-41084739)
chr5 (50-183)||(5844105-5844238)
chr5 (50-183)||(20656883-20657016)
chr5 (40-136)||(32304668-32304764)
chr5 (40-146)||(10925545-10925651)
chr5 (40-183)||(19577196-19577338)
chr5 (50-136)||(13084668-13084754)
chr5 (42-115)||(7440385-7440458)
chr5 (70-184)||(20071259-20071372)
chr5 (78-182)||(28662117-28662221)
chr5 (42-117)||(3631437-3631512)
chr5 (40-179)||(37042569-37042708)
chr5 (48-117)||(32304563-32304632)
chr5 (48-184)||(22578958-22579094)
chr5 (42-117)||(16823309-16823384)
chr5 (42-117)||(43348812-43348887)
chr5 (42-117)||(26525134-26525209)
chr5 (42-117)||(30773057-30773132)
chr5 (42-117)||(43358588-43358663)
chr5 (48-117)||(25701332-25701400)
chr5 (42-115)||(26785010-26785083)
chr5 (42-117)||(9596070-9596145)
chr5 (40-127)||(41817508-41817595)
chr5 (40-109)||(8074141-8074210)
chr5 (50-117)||(10925687-10925754)
chr5 (50-117)||(13013167-13013234)
chr5 (124-183)||(26784911-26784970)
chr5 (77-127)||(30050144-30050194)
chr5 (40-117)||(41084484-41084560)
[»] chr2 (55 HSPs)
chr2 (40-181)||(34983277-34983418)
chr2 (37-183)||(23869662-23869808)
chr2 (40-183)||(2249580-2249723)
chr2 (40-183)||(38763713-38763856)
chr2 (40-184)||(38527172-38527316)
chr2 (42-185)||(13615981-13616124)
chr2 (40-183)||(36436198-36436341)
chr2 (40-183)||(1115054-1115197)
chr2 (42-183)||(22674758-22674899)
chr2 (40-185)||(44545745-44545890)
chr2 (40-183)||(1021084-1021229)
chr2 (40-184)||(6750022-6750166)
chr2 (40-183)||(28745509-28745653)
chr2 (40-183)||(7366150-7366293)
chr2 (40-183)||(34494491-34494634)
chr2 (42-181)||(41699185-41699324)
chr2 (40-147)||(26293195-26293302)
chr2 (40-139)||(31392590-31392689)
chr2 (42-127)||(42016558-42016643)
chr2 (42-182)||(12994975-12995106)
chr2 (44-127)||(16194307-16194390)
chr2 (40-136)||(11764840-11764936)
chr2 (40-136)||(26860678-26860774)
chr2 (40-148)||(43471470-43471578)
chr2 (40-127)||(19283946-19284033)
chr2 (50-175)||(17526052-17526177)
chr2 (42-117)||(42016681-42016756)
chr2 (49-127)||(11935401-11935479)
chr2 (48-137)||(3836364-3836453)
chr2 (49-117)||(38763892-38763960)
chr2 (42-117)||(6749911-6749986)
chr2 (50-117)||(13615876-13615943)
chr2 (42-117)||(16194430-16194505)
chr2 (42-117)||(34983454-34983529)
chr2 (42-117)||(1114943-1115018)
chr2 (42-117)||(2249759-2249834)
chr2 (42-117)||(11764972-11765047)
chr2 (42-117)||(23869841-23869916)
chr2 (42-117)||(26293338-26293413)
chr2 (42-117)||(28745398-28745473)
chr2 (42-117)||(36436087-36436162)
chr2 (42-117)||(44545634-44545709)
chr2 (48-183)||(32099928-32100065)
chr2 (40-117)||(11935278-11935355)
chr2 (91-179)||(40897728-40897816)
chr2 (42-117)||(1020973-1021048)
chr2 (50-117)||(26860575-26860642)
chr2 (42-117)||(38527352-38527426)
chr2 (49-117)||(31392724-31392792)
chr2 (40-140)||(31643627-31643727)
chr2 (42-109)||(7366337-7366404)
chr2 (70-175)||(27640634-27640739)
chr2 (133-186)||(42473557-42473610)
chr2 (132-179)||(9467557-9467604)
chr2 (91-139)||(1538204-1538252)
[»] scaffold0014 (3 HSPs)
scaffold0014 (40-184)||(64932-65076)
scaffold0014 (42-117)||(65226-65301)
scaffold0014 (42-117)||(65112-65187)
[»] chr7 (58 HSPs)
chr7 (40-183)||(26873702-26873845)
chr7 (40-183)||(46027679-46027822)
chr7 (40-186)||(36675503-36675649)
chr7 (40-186)||(17166862-17167008)
chr7 (40-184)||(36358326-36358470)
chr7 (40-180)||(44468037-44468177)
chr7 (40-183)||(43859090-43859233)
chr7 (40-183)||(45350051-45350193)
chr7 (40-183)||(44724079-44724222)
chr7 (40-148)||(22723792-22723900)
chr7 (40-174)||(9624004-9624138)
chr7 (40-180)||(16834293-16834433)
chr7 (40-185)||(44142761-44142904)
chr7 (40-136)||(31428783-31428879)
chr7 (40-147)||(29075201-29075308)
chr7 (40-126)||(31065639-31065725)
chr7 (42-147)||(18104337-18104441)
chr7 (40-180)||(39976329-39976463)
chr7 (42-185)||(8461696-8461839)
chr7 (40-127)||(42241945-42242032)
chr7 (76-184)||(23562699-23562807)
chr7 (40-176)||(41367666-41367801)
chr7 (40-111)||(23469412-23469483)
chr7 (40-179)||(29502148-29502287)
chr7 (34-184)||(8727720-8727870)
chr7 (42-128)||(31931929-31932015)
chr7 (42-117)||(9624174-9624249)
chr7 (42-117)||(31065528-31065603)
chr7 (48-117)||(36675398-36675467)
chr7 (48-117)||(44723974-44724043)
chr7 (42-117)||(17167045-17167120)
chr7 (40-183)||(22499794-22499937)
chr7 (50-117)||(29075098-29075165)
chr7 (42-117)||(40055769-40055844)
chr7 (42-117)||(44142939-44143014)
chr7 (97-183)||(19692467-19692553)
chr7 (49-107)||(40055666-40055724)
chr7 (101-184)||(29662931-29663015)
chr7 (71-183)||(30781010-30781122)
chr7 (103-183)||(40054298-40054378)
chr7 (42-117)||(22723681-22723756)
chr7 (42-117)||(23469301-23469376)
chr7 (42-117)||(36358215-36358290)
chr7 (42-117)||(43859269-43859344)
chr7 (42-117)||(45350229-45350304)
chr7 (42-117)||(46027858-46027933)
chr7 (40-114)||(46828852-46828926)
chr7 (50-111)||(22566606-22566667)
chr7 (49-113)||(25174216-25174280)
chr7 (42-117)||(44467926-44468001)
chr7 (70-183)||(9014391-9014504)
chr7 (50-116)||(41367838-41367904)
chr7 (70-179)||(9013819-9013928)
chr7 (48-117)||(42241840-42241909)
chr7 (70-117)||(31428915-31428962)
chr7 (70-121)||(40883343-40883394)
chr7 (183-244)||(38029564-38029625)
chr7 (70-118)||(6961111-6961159)
[»] scaffold0050 (2 HSPs)
scaffold0050 (40-180)||(19048-19188)
scaffold0050 (48-117)||(19224-19293)
[»] chr6 (40 HSPs)
chr6 (40-184)||(2660854-2660998)
chr6 (40-183)||(12698493-12698637)
chr6 (40-185)||(24635486-24635631)
chr6 (40-183)||(9079071-9079214)
chr6 (40-183)||(8560426-8560568)
chr6 (40-181)||(24130260-24130396)
chr6 (40-183)||(16461425-16461568)
chr6 (48-185)||(13405387-13405524)
chr6 (40-183)||(26468448-26468591)
chr6 (40-183)||(11450520-11450667)
chr6 (183-268)||(28078705-28078790)
chr6 (40-180)||(34023558-34023698)
chr6 (40-136)||(15469136-15469232)
chr6 (40-136)||(7021864-7021960)
chr6 (42-165)||(23259086-23259210)
chr6 (40-136)||(34127544-34127640)
chr6 (48-183)||(12996284-12996418)
chr6 (191-268)||(8674808-8674885)
chr6 (191-268)||(8685487-8685564)
chr6 (42-117)||(34127676-34127751)
chr6 (91-185)||(2399372-2399466)
chr6 (42-183)||(10290457-10290598)
chr6 (48-117)||(7021996-7022065)
chr6 (40-127)||(14883177-14883265)
chr6 (42-117)||(2660743-2660818)
chr6 (42-117)||(26468627-26468702)
chr6 (40-117)||(12996464-12996541)
chr6 (42-117)||(11450409-11450484)
chr6 (42-117)||(23258859-23258934)
chr6 (42-117)||(23258973-23259048)
chr6 (49-175)||(31489832-31489955)
chr6 (42-117)||(34023447-34023522)
chr6 (70-117)||(15469268-15469315)
chr6 (42-111)||(12698678-12698747)
chr6 (48-117)||(24130155-24130224)
chr6 (90-171)||(31969048-31969129)
chr6 (42-117)||(16461313-16461389)
chr6 (50-117)||(8560604-8560671)
chr6 (91-176)||(2044876-2044961)
chr6 (40-171)||(7536468-7536599)
[»] scaffold0131 (2 HSPs)
scaffold0131 (34-183)||(11166-11326)
scaffold0131 (37-117)||(11356-11436)
[»] scaffold0002 (2 HSPs)
scaffold0002 (40-127)||(331827-331914)
scaffold0002 (49-117)||(331950-332018)
[»] scaffold0978 (2 HSPs)
scaffold0978 (40-147)||(1139-1246)
scaffold0978 (49-117)||(1282-1350)
[»] scaffold0003 (1 HSPs)
scaffold0003 (70-184)||(303864-303977)
[»] scaffold0041 (1 HSPs)
scaffold0041 (70-121)||(82890-82941)


Alignment Details
Target: chr4 (Bit Score: 116; Significance: 4e-59; HSPs: 71)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 40 - 183
Target Start/End: Complemental strand, 18491329 - 18491186
Alignment:
Q  40 actttgcaggaatttggatcaaccacaacataaaaccgacacaaaattacataaaatctcgcaaaatagacctataatcgttgattttctaactttttcg 139  Q
    ||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||| ||| |||| ||    
T  18491329 actttgcaggaatttggatcaaccaaaacataaaaccgacataaaattacataaaatctcacaaaatagacctataatcgttgattttttaatttttccg 18491230  T
Q  140 agtgggccgtggcccaccccatcccatgaagggctccgccactg 183  Q
    ||||||||||||||||||||| ||||||||||||||||||||||    
T  18491229 agtgggccgtggcccaccccagcccatgaagggctccgccactg 18491186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 109; E-Value: 7e-55
Query Start/End: Original strand, 40 - 183
Target Start/End: Original strand, 40228446 - 40228590
Alignment:
Q  40 actttgcaggaatttggatcaaccacaacataaaaccgacacaaaattacataaaatctcgcaaaatagacctataatcgttgattttctaacttttt-c 138  Q
    ||||||||||||||||||||||||| | |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||| ||||| |    
T  40228446 actttgcaggaatttggatcaaccaaagcataaaaccgacacaaaattgcataaaatctcgcaaaatagacctataatcgttgattttttaaatttttcc 40228545  T
Q  139 gagtgggccgtggcccaccccatcccatgaagggctccgccactg 183  Q
    | |||||||||||||||||||| ||||||||||||||||||||||    
T  40228546 gggtgggccgtggcccaccccagcccatgaagggctccgccactg 40228590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 40 - 183
Target Start/End: Original strand, 11650982 - 11651125
Alignment:
Q  40 actttgcaggaatttggatcaaccacaacataaaaccgacacaaaattacataaaatctcgcaaaatagacctataatcgttgattttctaactttttcg 139  Q
    |||||||| |||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||| |||| ||    
T  11650982 actttgcatgaatttggatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagacctataatcgttgattttttaatttttccg 11651081  T
Q  140 agtgggccgtggcccaccccatcccatgaagggctccgccactg 183  Q
     | |||||||||||||||||| ||||||||||||||||||||||    
T  11651082 ggcgggccgtggcccaccccagcccatgaagggctccgccactg 11651125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 40 - 181
Target Start/End: Original strand, 2654926 - 2655067
Alignment:
Q  40 actttgcaggaatttggatcaaccacaacataaaaccgacacaaaattacataaaatctcgcaaaatagacctataatcgttgattttctaactttttcg 139  Q
    ||||||||||||||||||||||||| ||||||||||||| |||||||| |||||||||||||||| |||| ||||||||||||||||| ||| |||||||    
T  2654926 actttgcaggaatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatctcgcaaactagatctataatcgttgattttttaattttttcg 2655025  T
Q  140 agtgggccgtggcccaccccatcccatgaagggctccgccac 181  Q
     |||||||||||||||||||| ||||||||||||||||||||    
T  2655026 ggtgggccgtggcccaccccagcccatgaagggctccgccac 2655067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 40 - 183
Target Start/End: Complemental strand, 6755971 - 6755828
Alignment:
Q  40 actttgcaggaatttggatcaaccacaacataaaaccgacacaaaattacataaaatctcgcaaaatagacctataatcgttgattttctaactttttcg 139  Q
    ||||||||||||||||||||||| | ||||||||| | |||||||||| ||||||||||||||||||||||||||||||||||||||| ||| |||| ||    
T  6755971 actttgcaggaatttggatcaacaaaaacataaaaacaacacaaaattgcataaaatctcgcaaaatagacctataatcgttgattttttaatttttccg 6755872  T
Q  140 agtgggccgtggcccaccccatcccatgaagggctccgccactg 183  Q
     |||||||||||||||||||| ||||||||||||||||||||||    
T  6755871 ggtgggccgtggcccaccccagcccatgaagggctccgccactg 6755828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 34 - 183
Target Start/End: Original strand, 44817559 - 44817708
Alignment:
Q  34 tatactactttgcaggaatttggatcaaccacaacataaaaccgacacaaaattacataaaatctcgcaaaatagacctataatcgttgattttctaact 133  Q
    ||||| ||||||||| ||||||||||||||| |||||||||||||||||||||| |||||||| ||| |||||||||||||| ||||||||||| ||| |    
T  44817559 tataccactttgcagaaatttggatcaaccaaaacataaaaccgacacaaaattgcataaaatttcgaaaaatagacctatagtcgttgattttttaatt 44817658  T
Q  134 ttttcgagtgggccgtggcccaccccatcccatgaagggctccgccactg 183  Q
    ||| || |||||||||||||||||||| ||||||||||||||||||||||    
T  44817659 tttccgggtgggccgtggcccaccccagcccatgaagggctccgccactg 44817708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 40 - 185
Target Start/End: Complemental strand, 13233372 - 13233227
Alignment:
Q  40 actttgcaggaatttggatcaaccacaacataaaaccgacacaaaattacataaaatctcgcaaaatagacctataatcgttgattttctaactttttcg 139  Q
    ||||||||||||||||||||||||| ||||||||||||| |||||||| |||||||| |||||||||||| ||||||||||||||||| ||| |||| ||    
T  13233372 actttgcaggaatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatatcgcaaaatagatctataatcgttgattttttaatttttccg 13233273  T
Q  140 agtgggccgtggcccaccccatcccatgaagggctccgccactgat 185  Q
     |||||||||||||||||||| || ||||||| |||||||||||||    
T  13233272 ggtgggccgtggcccaccccagcctatgaaggactccgccactgat 13233227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 32 - 184
Target Start/End: Original strand, 19653652 - 19653804
Alignment:
Q  32 attatactactttgcaggaatttggatcaaccacaacataaaaccgacacaaaattacataaaatctcgcaaaatagacctataatcgttgattttctaa 131  Q
    |||| |||| ||| ||||||||||||||||||| |||||||||||||||||||||| ||||||||||  ||||||||||||||||||||||||||| | |    
T  19653652 attacactattttacaggaatttggatcaaccaaaacataaaaccgacacaaaattgcataaaatctaacaaaatagacctataatcgttgattttttta 19653751  T
Q  132 ctttttcgagtgggccgtggcccaccccatcccatgaagggctccgccactga 184  Q
     ||||  | |||||||||||||||||||| |||||||||||||||||||||||    
T  19653752 tttttcggtgtgggccgtggcccaccccagcccatgaagggctccgccactga 19653804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 32 - 184
Target Start/End: Original strand, 31581758 - 31581910
Alignment:
Q  32 attatactactttgcaggaatttggatcaaccacaacataaaaccgacacaaaattacataaaatctcgcaaaatagacctataatcgttgattttctaa 131  Q
    |||| |||||||| ||||||||||||||||||| |||||||||||||||||||||| |||||||||| ||||||||||||||||||||||| |||| |||    
T  31581758 attacactactttacaggaatttggatcaaccaaaacataaaaccgacacaaaattgcataaaatctagcaaaatagacctataatcgttgtttttttaa 31581857  T
Q  132 ctttttcgagtgggccgtggcccaccccatcccatgaagggctccgccactga 184  Q
     ||||  | |||| ||||||||||||||| ||||||||||||| |||||||||    
T  31581858 tttttcggggtggaccgtggcccaccccagcccatgaagggcttcgccactga 31581910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 40 - 182
Target Start/End: Original strand, 44745606 - 44745748
Alignment:
Q  40 actttgcaggaatttggatcaaccacaacataaaaccgacacaaaattacataaaatctcgcaaaatagacctataatcgttgattttctaactttttcg 139  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||| ||| ||||  |    
T  44745606 actttgcaggaatttggatcaaccaaaacataaaaccgacacaaaattgcataaaatcttgcaaaatagacctataatcgttgattttttaatttttctg 44745705  T
Q  140 agtgggccgtggcccaccccatcccatgaagggctccgccact 182  Q
      ||||||||||||||||||| ||||| || ||||||||||||    
T  44745706 gatgggccgtggcccaccccagcccattaaaggctccgccact 44745748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 40 - 185
Target Start/End: Original strand, 36955026 - 36955171
Alignment:
Q  40 actttgcaggaatttggatcaaccacaacataaaaccgacacaaaattacataaaatctcgcaaaatagacctataatcgttgattttctaactttttcg 139  Q
    |||||||| |||||||||||||||| ||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||| ||| ||||| |    
T  36955026 actttgcaagaatttggatcaaccaaaacataaaaccaacacaaaattgcataaaatctcgcaaaatagacctataatcgttgattttttaattttttgg 36955125  T
Q  140 agtgggccgtggcccaccccatcccatgaagggctccgccactgat 185  Q
      |||| |  ||||||||||| ||||||||||||||||||||||||    
T  36955126 gatgggtcacggcccaccccagcccatgaagggctccgccactgat 36955171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 40 - 183
Target Start/End: Complemental strand, 44134635 - 44134493
Alignment:
Q  40 actttgcaggaatttggatcaaccacaacataaaaccgacacaaaattacataaaatctcgcaaaatagacctataatcgttgattttctaactttttcg 139  Q
    ||||||||||||||||||||||||| ||||||||||| | | |||||| ||||||||||| ||||||||||||||||||||||||||| ||| |||| ||    
T  44134635 actttgcaggaatttggatcaaccaaaacataaaaccaata-aaaattgcataaaatctcacaaaatagacctataatcgttgattttttaatttttccg 44134537  T
Q  140 agtgggccgtggcccaccccatcccatgaagggctccgccactg 183  Q
     |||| ||||||||||||||| ||||||||||||||||||||||    
T  44134536 ggtggaccgtggcccaccccagcccatgaagggctccgccactg 44134493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 40 - 183
Target Start/End: Original strand, 31664183 - 31664322
Alignment:
Q  40 actttgcaggaatttggatcaaccacaacataaaaccgacacaaaattacataaaatctcgcaaaatagacctataatcgttgattttctaactttttcg 139  Q
    ||||||||||||||||||||||||| | |||||||||||| ||||||| |||||||||||||||||    ||||||||| |||||||| ||| |||| ||    
T  31664183 actttgcaggaatttggatcaaccaaatcataaaaccgactcaaaattgcataaaatctcgcaaaa----cctataatcattgattttttaatttttccg 31664278  T
Q  140 agtgggccgtggcccaccccatcccatgaagggctccgccactg 183  Q
     |||||||||||||||||||||||||||||||||||||||||||    
T  31664279 ggtgggccgtggcccaccccatcccatgaagggctccgccactg 31664322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 40 - 184
Target Start/End: Complemental strand, 43564560 - 43564416
Alignment:
Q  40 actttgcaggaatttggatcaaccacaacataaaaccgacacaaaattacataaaatctcgcaaaatagacctataatcgttgattttctaactttttcg 139  Q
    ||||||||||||||||||||||||| ||||||||||| |||||||||| |||||||| |||||||||||||||||||||||||||||| ||| |||| ||    
T  43564560 actttgcaggaatttggatcaaccaaaacataaaaccaacacaaaattgcataaaatatcgcaaaatagacctataatcgttgattttttaatttttccg 43564461  T
Q  140 agtgggccgtggcccaccccatcccatgaagggctccgccactga 184  Q
      ||| | ||||||||||||| || |||||| |||||||||||||    
T  43564460 gatggactgtggcccaccccagccaatgaagagctccgccactga 43564416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 40 - 183
Target Start/End: Complemental strand, 16925248 - 16925106
Alignment:
Q  40 actttgcaggaatttggatcaaccacaacataaaaccgacacaaaattacataaaatctcgcaaaatagacctataatcgttgattttctaactttttcg 139  Q
    |||||| |||||||||||||||||| ||||||||||||| |||||||| |||||| ||||||||| |||||||||||||||||||||| ||| |||| ||    
T  16925248 actttgtaggaatttggatcaaccaaaacataaaaccgatacaaaattgcataaagtctcgcaaattagacctataatcgttgattttttaatttttccg 16925149  T
Q  140 agtgggccgtggcccaccccatcccatgaagggctccgccactg 183  Q
     |||| ||||||||||||||  ||||||||||||||||||||||    
T  16925148 ggtggaccgtggcccacccc-gcccatgaagggctccgccactg 16925106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 40 - 183
Target Start/End: Complemental strand, 36584565 - 36584423
Alignment:
Q  40 actttgcaggaatttggatcaaccacaacataaaaccgacacaaaattacataaaatctcgcaaaatagacctataatcgttgattttctaactttttcg 139  Q
    ||||||||||||||||||||||||| ||||||||||  |||||||||| ||||||||||||||||||| |||||||||  |||||||| | | |||| ||    
T  36584565 actttgcaggaatttggatcaaccaaaacataaaactaacacaaaattgcataaaatctcgcaaaatatacctataattattgatttt-ttatttttccg 36584467  T
Q  140 agtgggccgtggcccaccccatcccatgaagggctccgccactg 183  Q
     |||||||||||||||||||| ||||||||||||||||||||||    
T  36584466 ggtgggccgtggcccaccccagcccatgaagggctccgccactg 36584423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 40 - 174
Target Start/End: Original strand, 13613108 - 13613241
Alignment:
Q  40 actttgcaggaatttggatcaaccacaacataaaaccgacacaaaattacataaaatctcgcaaaatagacctataatcgttgattttctaactttttcg 139  Q
    |||||| |||||||||||||||||| || |||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||| ||| |||| ||    
T  13613108 actttgtaggaatttggatcaaccaaaatataaaaccaacacaaaattgcataaaatctcgcaaaatagacctataatcgttgattttttaatttttccg 13613207  T
Q  140 agtgggccgtggcccaccccatcccatgaagggct 174  Q
     ||||||||||||||| |||| |||||||||||||    
T  13613208 ggtgggccgtggccca-cccagcccatgaagggct 13613241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 40 - 180
Target Start/End: Original strand, 38141573 - 38141714
Alignment:
Q  40 actttgcaggaatttggatcaaccacaacataaaaccgacacaaaattacataaaatctcgcaaaatagacctataatcgttga-ttttctaactttttc 138  Q
    ||||||||||||||||||||||| | |||||||||  || |||||||| ||||||||||||||||||||||||||||||||||| |||| ||| |||| |    
T  38141573 actttgcaggaatttggatcaacaaaaacataaaattgatacaaaattgcataaaatctcgcaaaatagacctataatcgttgatttttttaatttttcc 38141672  T
Q  139 gagtgggccgtggcccaccccatcccatgaagggctccgcca 180  Q
    | |||||||||||||| ||||| |||||||||||||||||||    
T  38141673 gggtgggccgtggccctccccagcccatgaagggctccgcca 38141714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 183 - 268
Target Start/End: Original strand, 1326003 - 1326088
Alignment:
Q  183 gatgtcatggacataatatgatatgatacagtaccaatgtctatgataattaatattatgaatttaatcagaacaattatgacatt 268  Q
    |||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1326003 gatgtcatggtcataatatgatatgatatagtaccaatgtctatgataattaatattatgaatttaatcagaacaattatgacatt 1326088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 48 - 185
Target Start/End: Complemental strand, 27270487 - 27270351
Alignment:
Q  48 ggaatttggatcaaccacaacataaaaccgacacaaaattacataaaatctcgcaaaatagacctataatcgttgattttctaactttttcgagtgggcc 147  Q
    ||||||| |||||| || ||| ||||||||||||||||||  ||||||||||||||||||||| ||||||| |||||||| ||| |||| || ||||||     
T  27270487 ggaattttgatcaatcaaaacctaaaaccgacacaaaattgtataaaatctcgcaaaatagacttataatcattgattttttaa-ttttccgggtgggct 27270389  T
Q  148 gtggcccaccccatcccatgaagggctccgccactgat 185  Q
    ||||||||||||| ||||||||||||||||||||||||    
T  27270388 gtggcccaccccagcccatgaagggctccgccactgat 27270351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 40 - 136
Target Start/End: Complemental strand, 45670102 - 45670006
Alignment:
Q  40 actttgcaggaatttggatcaaccacaacataaaaccgacacaaaattacataaaatctcgcaaaatagacctataatcgttgattttctaactttt 136  Q
    |||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||| ||||    
T  45670102 actttgtaggaatttggatcaaccaaaacataaaaccgacacaaaattacataaaatctcgcaaaataaacctataatcgttgattttttaattttt 45670006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 40 - 183
Target Start/End: Complemental strand, 52581598 - 52581455
Alignment:
Q  40 actttgcaggaatttggatcaaccacaacataaaaccgacacaaaattacataaaatctcgcaaaatagacctataatcgttgattttctaactttttcg 139  Q
    ||||||||||||||||||||||| | ||||| |||||||||||||| | |||||||| | |||||||||||||||||||||||||||| |   ||||||     
T  52581598 actttgcaggaatttggatcaactaaaacatgaaaccgacacaaaactccataaaatattgcaaaatagacctataatcgttgattttttttatttttcc 52581499  T
Q  140 ag-tgggccgtggcccaccccatcccatgaagggctccgccactg 183  Q
     | ||||||||||||||||| | ||||||||||||||||||||||    
T  52581498 ggatgggccgtggcccaccc-agcccatgaagggctccgccactg 52581455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 40 - 127
Target Start/End: Original strand, 12700584 - 12700671
Alignment:
Q  40 actttgcaggaatttggatcaaccacaacataaaaccgacacaaaattacataaaatctcgcaaaatagacctataatcgttgatttt 127  Q
    ||||||||||||||||||||||||| ||||||||| |||||||||||| |||||| |||||||||||| |||||||||||||||||||    
T  12700584 actttgcaggaatttggatcaaccaaaacataaaatcgacacaaaattgcataaagtctcgcaaaataaacctataatcgttgatttt 12700671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 40 - 139
Target Start/End: Complemental strand, 41832518 - 41832419
Alignment:
Q  40 actttgcaggaatttggatcaaccacaacataaaaccgacacaaaattacataaaatctcgcaaaatagacctataatcgttgattttctaactttttcg 139  Q
    ||||||||||||||||||||||||| ||||||||||||||| |||||| |||||||||| ||||||||||| |||||||||| ||||| ||| |||||||    
T  41832518 actttgcaggaatttggatcaaccaaaacataaaaccgacataaaattgcataaaatcttgcaaaatagacatataatcgttaattttttaattttttcg 41832419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 53 - 183
Target Start/End: Complemental strand, 51001605 - 51001475
Alignment:
Q  53 ttggatcaaccacaacataaaaccgacacaaaattacataaaatctcgcaaaatagacctataatcgttgattttctaactttttcgagtgggccgtggc 152  Q
    |||||||||||  ||| |||||  |||| ||||||  ||||||| | ||||||||||| ||||| |||||||||| ||| |||| || ||||||||||||    
T  51001605 ttggatcaaccgaaacctaaaaaagacataaaattgtataaaatattgcaaaatagacttataaacgttgattttttaatttttccgggtgggccgtggc 51001506  T
Q  153 ccaccccatcccatgaagggctccgccactg 183  Q
    |||||||| ||||||||||||||||||||||    
T  51001505 ccaccccagcccatgaagggctccgccactg 51001475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 40 - 183
Target Start/End: Complemental strand, 22647253 - 22647110
Alignment:
Q  40 actttgcaggaatttggatcaaccacaacataaaaccgacacaaaattacataaaatctcgcaaaataga-cctataatcgttgattttctaactttttc 138  Q
    |||||||| |||||||||||||| | || ||||||| ||||||||||| ||||||||||||||||| | | |||||| ||||||||||| | | ||||      
T  22647253 actttgcatgaatttggatcaacaaaaatataaaac-gacacaaaattgcataaaatctcgcaaaaaaaaacctatagtcgttgatttttttatttttct 22647155  T
Q  139 gagtgggccgtggcccaccccatcccatgaagggctccgccactg 183  Q
    |  |||||||||||||||| || ||||||||||||||||||||||    
T  22647154 ggatgggccgtggcccacctcagcccatgaagggctccgccactg 22647110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 40 - 183
Target Start/End: Complemental strand, 13869284 - 13869142
Alignment:
Q  40 actttgcaggaatttggatcaaccacaacataaaaccgacacaaaattacataaaatctcgcaaaatagacctataatcgttgattttctaactttttcg 139  Q
    ||||||||| ||||||||||| ||  ||| ||||||||||||||||| | |||||||||| |||||||||||||   || || ||||| ||| ||||||     
T  13869284 actttgcagaaatttggatcagccgaaacctaaaaccgacacaaaatgatataaaatctcacaaaatagaccta-cgtcattaattttttaattttttca 13869186  T
Q  140 agtgggccgtggcccaccccatcccatgaagggctccgccactg 183  Q
      ||||||||||||||||| | ||||||||||||||||||||||    
T  13869185 gatgggccgtggcccaccctaacccatgaagggctccgccactg 13869142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 40 - 139
Target Start/End: Original strand, 54795745 - 54795844
Alignment:
Q  40 actttgcaggaatttggatcaaccacaacataaaaccgacacaaaattacataaaatctcgcaaaatagacctataatcgttgattttctaactttttcg 139  Q
    ||||||| |||||||||||||| || ||  ||||||||||||||||||  ||||||||| |||||||||||||||||||||||||||| ||| |||||||    
T  54795745 actttgcgggaatttggatcaatcaaaatctaaaaccgacacaaaattgtataaaatcttgcaaaatagacctataatcgttgattttttaattttttcg 54795844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 40 - 136
Target Start/End: Original strand, 10096472 - 10096568
Alignment:
Q  40 actttgcaggaatttggatcaaccacaacataaaaccgacacaaaattacataaaatctcgcaaaatagacctataatcgttgattttctaactttt 136  Q
    ||||||| | ||||||||||||||  ||| ||||||||||||||||||| |||||||||||||||||  ||||||||||||||||||| ||| ||||    
T  10096472 actttgcggaaatttggatcaaccgaaacttaaaaccgacacaaaattatataaaatctcgcaaaatgaacctataatcgttgattttttaattttt 10096568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 40 - 136
Target Start/End: Complemental strand, 50767176 - 50767080
Alignment:
Q  40 actttgcaggaatttggatcaaccacaacataaaaccgacacaaaattacataaaatctcgcaaaatagacctataatcgttgattttctaactttt 136  Q
    ||||||| | |||||||||||| || ||| ||||||||||| ||||||  |||||||||||||||||||||||||||||||||||||| ||| ||||    
T  50767176 actttgcggaaatttggatcaatcaaaacctaaaaccgacataaaattgtataaaatctcgcaaaatagacctataatcgttgattttttaattttt 50767080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 37 - 117
Target Start/End: Complemental strand, 44134751 - 44134671
Alignment:
Q  37 actactttgcaggaatttggatcaaccacaacataaaaccgacacaaaattacataaaatctcgcaaaatagacctataat 117  Q
    |||| ||||| ||||||||||||||||| ||| ||||||||||| ||||||  ||||||||||||||||||||||||||||    
T  44134751 actaatttgcgggaatttggatcaaccaaaacctaaaaccgacataaaattgtataaaatctcgcaaaatagacctataat 44134671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 70 - 172
Target Start/End: Complemental strand, 133463 - 133361
Alignment:
Q  70 taaaaccgacacaaaattacataaaatctcgcaaaatagacctataatcgttgattttctaactttttcgagtgggccgtggcccaccccatcccatgaa 169  Q
    ||||||| ||||||||||| |||||||||| ||||||| ||||||||||| | ||||| ||| |||| |  |||||  ||||||||||||||||||||||    
T  133463 taaaaccaacacaaaattatataaaatctcacaaaatatacctataatcgctaattttttaatttttccaggtgggatgtggcccaccccatcccatgaa 133364  T
Q  170 ggg 172  Q
    |||    
T  133363 ggg 133361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 40 - 185
Target Start/End: Original strand, 4632721 - 4632870
Alignment:
Q  40 actttgcaggaatttggatcaaccacaacataaaaccgacacaaaattacataaaatctcgcaaaatagacctataatcgttgattttctaactttttcg 139  Q
    ||||||| ||||||||||||||||  ||  ||||||  ||||||||||  ||||||||||||||||||||| ||||||||||| |||| ||| |||||||    
T  4632721 actttgcgggaatttggatcaaccgaaatctaaaactaacacaaaattgtataaaatctcgcaaaatagacttataatcgttgtttttttaa-tttttcg 4632819  T
Q  140 agtg-----ggccgtggcccaccccatcccatgaagggctccgccactgat 185  Q
     |||     |||||||||||| | || ||||||||||||| ||||| ||||    
T  4632820 ggtggggttggccgtggcccatcacagcccatgaagggcttcgccattgat 4632870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 74 - 179
Target Start/End: Original strand, 9046131 - 9046236
Alignment:
Q  74 accgacacaaaattacataaaatctcgcaaaatagacctataatcgttgattttctaactttttcgagtgggccgtggcccaccccatcccatgaagggc 173  Q
    ||||||||||||||  |||||||||||||||||||| ||||||||||| ||||| ||| ||||  ||||||   ||||||||||| | |||||||||| |    
T  9046131 accgacacaaaattgtataaaatctcgcaaaatagatctataatcgttaattttttaatttttctgagtggattgtggcccaccctagcccatgaaggac 9046230  T
Q  174 tccgcc 179  Q
    ||||||    
T  9046231 tccgcc 9046236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 42 - 117
Target Start/End: Complemental strand, 6756082 - 6756007
Alignment:
Q  42 tttgcaggaatttggatcaaccacaacataaaaccgacacaaaattacataaaatctcgcaaaatagacctataat 117  Q
    ||||| ||||||||||||||||  ||||||||||||||| |||||   ||||||||||||||||||||||||||||    
T  6756082 tttgcgggaatttggatcaaccgaaacataaaaccgacataaaatagtataaaatctcgcaaaatagacctataat 6756007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 42 - 117
Target Start/End: Original strand, 10096361 - 10096436
Alignment:
Q  42 tttgcaggaatttggatcaaccacaacataaaaccgacacaaaattacataaaatctcgcaaaatagacctataat 117  Q
    |||||||||||||||||||| |  ||| ||||||||||| ||||||  ||||||||||||||||||||||||||||    
T  10096361 tttgcaggaatttggatcaatcgaaacttaaaaccgacataaaattgtataaaatctcgcaaaatagacctataat 10096436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 42 - 117
Target Start/End: Complemental strand, 13233483 - 13233408
Alignment:
Q  42 tttgcaggaatttggatcaaccacaacataaaaccgacacaaaattacataaaatctcgcaaaatagacctataat 117  Q
    ||||| ||||||||||||||||  ||| ||||||||||| ||||||  ||||||||||||||||||||||||||||    
T  13233483 tttgcgggaatttggatcaaccgaaacctaaaaccgacataaaattgtataaaatctcgcaaaatagacctataat 13233408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 42 - 117
Target Start/End: Original strand, 13612997 - 13613072
Alignment:
Q  42 tttgcaggaatttggatcaaccacaacataaaaccgacacaaaattacataaaatctcgcaaaatagacctataat 117  Q
    ||||| ||||||||||||||||| ||| ||||||||||| ||||||  ||||||||||| ||||||||||||||||    
T  13612997 tttgcgggaatttggatcaaccaaaacctaaaaccgacataaaattgtataaaatctcggaaaatagacctataat 13613072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 40 - 183
Target Start/End: Complemental strand, 13857754 - 13857612
Alignment:
Q  40 actttgcaggaatttggatcaaccacaacataaaaccgacacaaaattacataaaatctcgcaaaatagacctataatcgttgattttctaactttttcg 139  Q
    ||||| ||| ||||||||||| ||  ||| ||||||| ||||||||||  |||||||||| ||||||| ||||||  || || ||||| | | |||| |     
T  13857754 actttacagaaatttggatcagccgaaacttaaaaccaacacaaaattgtataaaatctcacaaaatacacctatg-tctttaattttttgatttttcca 13857656  T
Q  140 agtgggccgtggcccaccccatcccatgaagggctccgccactg 183  Q
    ||||||||||||||||||| | ||||||||||||| ||||||||    
T  13857655 agtgggccgtggcccaccctagcccatgaagggcttcgccactg 13857612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 42 - 115
Target Start/End: Complemental strand, 18491440 - 18491367
Alignment:
Q  42 tttgcaggaatttggatcaaccacaacataaaaccgacacaaaattacataaaatctcgcaaaatagacctata 115  Q
    ||||| ||||||||||||||||  ||| ||||||||||| ||||||  ||||||||||||||||||||||||||    
T  18491440 tttgcgggaatttggatcaaccgaaacctaaaaccgacataaaattgtataaaatctcgcaaaatagacctata 18491367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 48 - 117
Target Start/End: Complemental strand, 36584670 - 36584601
Alignment:
Q  48 ggaatttggatcaaccacaacataaaaccgacacaaaattacataaaatctcgcaaaatagacctataat 117  Q
    ||||||||||||||| | ||| ||||||||||| ||||||  ||||||||||||||||||||||||||||    
T  36584670 ggaatttggatcaactaaaacttaaaaccgacataaaattgtataaaatctcgcaaaatagacctataat 36584601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 48 - 137
Target Start/End: Original strand, 36801885 - 36801974
Alignment:
Q  48 ggaatttggatcaaccacaacataaaaccgacacaaaattacataaaatctcgcaaaatagacctataatcgttgattttctaacttttt 137  Q
    ||||||||| ||| ||  ||| ||||||||||||||||||| ||||||||||||||||||||| ||| |||||| ||||| ||| |||||    
T  36801885 ggaatttggttcagccgaaacctaaaaccgacacaaaattatataaaatctcgcaaaatagacttatgatcgttaattttttaatttttt 36801974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 91 - 179
Target Start/End: Complemental strand, 9024185 - 9024098
Alignment:
Q  91 taaaatctcgcaaaatagacctataatcgttgattttctaactttttcgagtgggccgtggcccaccccatcccatgaagggctccgcc 179  Q
    ||||||| |||||| |||| |||||||| || ||||| ||| ||||||| ||||||||||||||| |||||||||| ||||||||||||    
T  9024185 taaaatcccgcaaagtagatctataatcattaattttttaattttttcgggtgggccgtggccca-cccatcccataaagggctccgcc 9024098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 42 - 117
Target Start/End: Original strand, 12700473 - 12700548
Alignment:
Q  42 tttgcaggaatttggatcaaccacaacataaaaccgacacaaaattacataaaatctcgcaaaatagacctataat 117  Q
    ||||| ||||||||||||||||  ||| ||||| ||||| ||||||  ||||||||||||||||||||||||||||    
T  12700473 tttgcgggaatttggatcaaccgaaacctaaaatcgacataaaattgtataaaatctcgcaaaatagacctataat 12700548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 42 - 117
Target Start/End: Original strand, 31581655 - 31581730
Alignment:
Q  42 tttgcaggaatttggatcaaccacaacataaaaccgacacaaaattacataaaatctcgcaaaatagacctataat 117  Q
    ||||| ||||||||||||||||  ||| ||||| ||||| ||||||  ||||||||||||||||||||||||||||    
T  31581655 tttgcgggaatttggatcaaccgaaacctaaaatcgacataaaattgtataaaatctcgcaaaatagacctataat 31581730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 42 - 117
Target Start/End: Original strand, 31664072 - 31664147
Alignment:
Q  42 tttgcaggaatttggatcaaccacaacataaaaccgacacaaaattacataaaatctcgcaaaatagacctataat 117  Q
    ||||| ||||||||||||||||  ||| ||||||||||| ||||||  ||||||||| ||||||||||||||||||    
T  31664072 tttgcgggaatttggatcaaccgaaacctaaaaccgacataaaattttataaaatcttgcaaaatagacctataat 31664147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 42 - 117
Target Start/End: Original strand, 38141462 - 38141537
Alignment:
Q  42 tttgcaggaatttggatcaaccacaacataaaaccgacacaaaattacataaaatctcgcaaaatagacctataat 117  Q
    ||||| ||||||||||||||||  ||| ||||||||||| ||||||  |||||||||| |||||||||||||||||    
T  38141462 tttgcgggaatttggatcaaccgaaacctaaaaccgacataaaattgtataaaatctcacaaaatagacctataat 38141537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 42 - 117
Target Start/End: Complemental strand, 43564671 - 43564596
Alignment:
Q  42 tttgcaggaatttggatcaaccacaacataaaaccgacacaaaattacataaaatctcgcaaaatagacctataat 117  Q
    ||||| ||||||||||||||||  ||| ||||||||||| ||||||  ||||||||||||||||||||| ||||||    
T  43564671 tttgcgggaatttggatcaaccgaaacctaaaaccgacataaaattgtataaaatctcgcaaaatagacttataat 43564596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 42 - 113
Target Start/End: Original strand, 44745495 - 44745566
Alignment:
Q  42 tttgcaggaatttggatcaaccacaacataaaaccgacacaaaattacataaaatctcgcaaaatagaccta 113  Q
    ||||| ||||||||||||||||  ||| ||||||||||| ||||||  ||||||||||||||||||||||||    
T  44745495 tttgcgggaatttggatcaaccgaaacctaaaaccgacataaaattgtataaaatctcgcaaaatagaccta 44745566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 90 - 182
Target Start/End: Complemental strand, 18669021 - 18668929
Alignment:
Q  90 ataaaatctcgcaaaatagacctataatcgttgattttctaactttttcgagtgggccgtggcccaccccatcccatgaagggctccgccact 182  Q
    ||||||||||||||| |||||||||||||||| ||||| ||| |||| |  ||||||||||  | |||| | ||||||||||||||| |||||    
T  18669021 ataaaatctcgcaaagtagacctataatcgttaattttttaatttttccaggtgggccgtgatcaaccctagcccatgaagggctccaccact 18668929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 90 - 182
Target Start/End: Complemental strand, 18714872 - 18714780
Alignment:
Q  90 ataaaatctcgcaaaatagacctataatcgttgattttctaactttttcgagtgggccgtggcccaccccatcccatgaagggctccgccact 182  Q
    ||||||||||||||| |||||||||||||||| |||||  || |||||||  ||||| |||| |||||| |  |||| |||||||||||||||    
T  18714872 ataaaatctcgcaaagtagacctataatcgttaatttttaaattttttcggatgggctgtggtccaccctagtccataaagggctccgccact 18714780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 90 - 158
Target Start/End: Complemental strand, 18735272 - 18735204
Alignment:
Q  90 ataaaatctcgcaaaatagacctataatcgttgattttctaactttttcgagtgggccgtggcccaccc 158  Q
    |||||||||||||||||||||||||||||||| ||||| ||| |||| || || |||||||| ||||||    
T  18735272 ataaaatctcgcaaaatagacctataatcgttaattttttaatttttccgggtaggccgtggtccaccc 18735204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 49 - 117
Target Start/End: Complemental strand, 41832623 - 41832555
Alignment:
Q  49 gaatttggatcaaccacaacataaaaccgacacaaaattacataaaatctcgcaaaatagacctataat 117  Q
    ||||| |||||||||  ||| ||||||||||| ||||||  ||||||||||||||||||||||||||||    
T  41832623 gaattgggatcaaccgaaacctaaaaccgacataaaattgtataaaatctcgcaaaatagacctataat 41832555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 42 - 117
Target Start/End: Original strand, 11650871 - 11650946
Alignment:
Q  42 tttgcaggaatttggatcaaccacaacataaaaccgacacaaaattacataaaatctcgcaaaatagacctataat 117  Q
    ||||| ||||||||||||||||| ||| ||||| ||||| ||||||  |||||||||| ||||||| |||||||||    
T  11650871 tttgcgggaatttggatcaaccaaaacctaaaatcgacataaaattgtataaaatctcccaaaataaacctataat 11650946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 42 - 117
Target Start/End: Original strand, 36954915 - 36954990
Alignment:
Q  42 tttgcaggaatttggatcaaccacaacataaaaccgacacaaaattacataaaatctcgcaaaatagacctataat 117  Q
    ||||| || |||||||||||||  ||| ||||| ||||| ||||||  ||||||||||||||||||||||||||||    
T  36954915 tttgcggggatttggatcaaccgaaacgtaaaatcgacataaaattgtataaaatctcgcaaaatagacctataat 36954990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 42 - 117
Target Start/End: Original strand, 44817455 - 44817530
Alignment:
Q  42 tttgcaggaatttggatcaaccacaacataaaaccgacacaaaattacataaaatctcgcaaaatagacctataat 117  Q
    |||||||||||||||||||| |  ||  ||||||||||| ||||||  ||||||||||||| ||||||||||||||    
T  44817455 tttgcaggaatttggatcaatcgaaatctaaaaccgacataaaattgtataaaatctcgcagaatagacctataat 44817530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 82 - 179
Target Start/End: Complemental strand, 29006323 - 29006227
Alignment:
Q  82 aaaattacataaaatctcgcaaaatagacctataatcgttgattttctaactttttcgagtgggccgtggcccaccccatcccatgaagggctccgcc 179  Q
    |||||||  ||||||||||| ||||| ||||||||| ||| ||||| ||| |||||||  ||| ||||||||||| ||| ||||| ||||||||||||    
T  29006323 aaaattatttaaaatctcgcgaaataaacctataatagttaatttt-taaatttttcggatggaccgtggcccactccagcccataaagggctccgcc 29006227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 70 - 109
Target Start/End: Complemental strand, 10393935 - 10393896
Alignment:
Q  70 taaaaccgacacaaaattacataaaatctcgcaaaataga 109  Q
    ||||||||||||||||||| ||||||||||||||||||||    
T  10393935 taaaaccgacacaaaattatataaaatctcgcaaaataga 10393896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 50 - 117
Target Start/End: Complemental strand, 16925351 - 16925284
Alignment:
Q  50 aatttggatcaaccacaacataaaaccgacacaaaattacataaaatctcgcaaaatagacctataat 117  Q
    ||||||||||||||  ||| ||||||||||| ||| ||  |||||||||| |||||||||||||||||    
T  16925351 aatttggatcaaccgaaacctaaaaccgacataaatttgtataaaatctcacaaaatagacctataat 16925284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 48 - 117
Target Start/End: Complemental strand, 22647358 - 22647289
Alignment:
Q  48 ggaatttggatcaaccacaacataaaaccgacacaaaattacataaaatctcgcaaaatagacctataat 117  Q
    |||||||| |||||||  ||| ||||||  ||| ||||||  ||||||||||||||||||||||||||||    
T  22647358 ggaatttgaatcaaccgaaacctaaaacaaacataaaattgtataaaatctcgcaaaatagacctataat 22647289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 40 - 117
Target Start/End: Complemental strand, 50767289 - 50767213
Alignment:
Q  40 actttgcaggaatttggatcaaccacaacataaaaccgacacaaaattacataaaatctcgcaaaatagacctataat 117  Q
    ||||||| |||||||| |||||||  ||| ||||||||||| |||| |  ||||||||||| ||||||||||||||||    
T  50767289 actttgcgggaatttgaatcaaccgaaacctaaaaccgacataaaaatgtataaaatctcg-aaaatagacctataat 50767213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 40 - 117
Target Start/End: Original strand, 54795632 - 54795708
Alignment:
Q  40 actttgcaggaatttggatcaaccacaacataaaaccgacacaaaattacataaaatctcgcaaaatagacctataat 117  Q
    ||||||| |||||||| |||||||  ||| ||||||||||| |||| |  ||||||||||| ||||||||||||||||    
T  54795632 actttgcgggaatttgaatcaaccgaaacctaaaaccgacataaaaatgtataaaatctcg-aaaatagacctataat 54795708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 90 - 158
Target Start/End: Complemental strand, 18707769 - 18707701
Alignment:
Q  90 ataaaatctcgcaaaatagacctataatcgttgattttctaactttttcgagtgggccgtggcccaccc 158  Q
    ||||||||| ||||| |||||||||||||||| ||||| ||| |||  || ||||||||||| ||||||    
T  18707769 ataaaatcttgcaaagtagacctataatcgttaattttttaattttgccgggtgggccgtggtccaccc 18707701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 91 - 172
Target Start/End: Original strand, 11975791 - 11975871
Alignment:
Q  91 taaaatctcgcaaaatagacctataatcgttgattttctaactttttcgagtgggccgtggcccaccccatcccatgaaggg 172  Q
    |||||||||||| |||||||||||||| ||| ||||| ||| ||||  | ||||| |||| ||||||||| | |||||||||    
T  11975791 taaaatctcgcagaatagacctataattgttaatttt-taatttttctgggtgggtcgtgacccaccccagctcatgaaggg 11975871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 48 - 117
Target Start/End: Original strand, 19653556 - 19653624
Alignment:
Q  48 ggaatttggatcaaccacaacataaaaccgacacaaaattacataaaatctcgcaaaatagacctataat 117  Q
    ||||||||||||||||  ||| ||||| ||||| ||||||  |||||||||| | |||||||||||||||    
T  19653556 ggaatttggatcaaccgaaacctaaaatcgacataaaattgtataaaatctcac-aaatagacctataat 19653624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 183 - 244
Target Start/End: Original strand, 23633233 - 23633294
Alignment:
Q  183 gatgtcatggacataatatgatatgatacagtaccaatgtctatgataattaatattatgaa 244  Q
    ||||||||||| ||| |||| |||| ||||||||||| ||||||| |  |||||||||||||    
T  23633233 gatgtcatggaaatattatgttatggtacagtaccaacgtctatggttcttaatattatgaa 23633294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 40 - 117
Target Start/End: Complemental strand, 27270608 - 27270532
Alignment:
Q  40 actttgcaggaatttggatcaaccacaacataaaaccgacacaaaattacataaaatctcgcaaaatagacctataat 117  Q
    ||||||| |||||||| |||||||  ||| ||||||||||| |||| |  ||||||||||| |||||||| |||||||    
T  27270608 actttgcgggaatttgaatcaaccgaaacctaaaaccgacataaaaatgtataaaatctcg-aaaatagatctataat 27270532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 70 - 114
Target Start/End: Original strand, 4632637 - 4632681
Alignment:
Q  70 taaaaccgacacaaaattacataaaatctcgcaaaatagacctat 114  Q
    ||||| ||||||||||||  ||| |||||||||||||||||||||    
T  4632637 taaaatcgacacaaaattgtatataatctcgcaaaatagacctat 4632681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 184 - 244
Target Start/End: Original strand, 24539193 - 24539253
Alignment:
Q  184 atgtcatggacataatatgatatgatacagtaccaatgtctatgataattaatattatgaa 244  Q
    |||||||||| ||| |||| |||| ||||||||||| ||||||| |  |||||||||||||    
T  24539193 atgtcatggaaatattatgttatggtacagtaccaaagtctatgcttcttaatattatgaa 24539253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 91 - 179
Target Start/End: Complemental strand, 32151149 - 32151061
Alignment:
Q  91 taaaatctcgcaaaatagacctataatcgttgattttctaactttttcgagtgggccgtggcccaccccatcccatgaagggctccgcc 179  Q
    |||||||| ||| |||| | ||||||| ||| ||||| ||| ||||||| |||| || ||| ||||| || |||| |||||||||||||    
T  32151149 taaaatctagcataataaatctataattgttaattttttaattttttcgggtggaccatggtccacctcagcccacgaagggctccgcc 32151061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 49 - 113
Target Start/End: Original strand, 40228342 - 40228406
Alignment:
Q  49 gaatttggatcaaccacaacataaaaccgacacaaaattacataaaatctcgcaaaatagaccta 113  Q
    |||||||||||||||  ||| |||||| |||| |||||   |||||||||||| |||||||||||    
T  40228342 gaatttggatcaaccgaaacctaaaactgacataaaatcgtataaaatctcgccaaatagaccta 40228406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 113; Significance: 3e-57; HSPs: 75)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 40 - 196
Target Start/End: Original strand, 33012072 - 33012228
Alignment:
Q  40 actttgcaggaatttggatcaaccacaacataaaaccgacacaaaattacataaaatctcgcaaaatagacctataatcgttgattttctaactttttcg 139  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||| ||| |||| ||    
T  33012072 actttgcaggaatttggatcaaccaaaacataaaaccgacacaaaattgcataaaatctcacaaaatagacctataatcgttgattttttaatttttccg 33012171  T
Q  140 agtgggccgtggcccaccccatcccatgaagggctccgccactgatgtcatggacat 196  Q
     |||||||||||||||||||| ||||||||||||||||||| || ||||||| ||||    
T  33012172 ggtgggccgtggcccaccccagcccatgaagggctccgccattggtgtcatgaacat 33012228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 40 - 183
Target Start/End: Complemental strand, 8530225 - 8530082
Alignment:
Q  40 actttgcaggaatttggatcaaccacaacataaaaccgacacaaaattacataaaatctcgcaaaatagacctataatcgttgattttctaactttttcg 139  Q
    |||||||| |||||||||||||||| ||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||| ||| |||||||    
T  8530225 actttgcaagaatttggatcaaccagaacataaaatcgacacaaaattgcataaaatctcgcaaaatagacctataatcgttgattttttaattttttcg 8530126  T
Q  140 agtgggccgtggcccaccccatcccatgaagggctccgccactg 183  Q
     |||||||||||||||||||| ||||||||||||||||||||||    
T  8530125 ggtgggccgtggcccaccccagcccatgaagggctccgccactg 8530082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 40 - 183
Target Start/End: Original strand, 16692964 - 16693107
Alignment:
Q  40 actttgcaggaatttggatcaaccacaacataaaaccgacacaaaattacataaaatctcgcaaaatagacctataatcgttgattttctaactttttcg 139  Q
    |||||| |||||||||||||||||| |||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||| ||| |||| ||    
T  16692964 actttgtaggaatttggatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgtaaaatagacctataatcgttgattttttaatttttccg 16693063  T
Q  140 agtgggccgtggcccaccccatcccatgaagggctccgccactg 183  Q
     |||||||||||||||||||| ||||||||||||||||||||||    
T  16693064 ggtgggccgtggcccaccccagcccatgaagggctccgccactg 16693107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 40 - 185
Target Start/End: Original strand, 17285309 - 17285454
Alignment:
Q  40 actttgcaggaatttggatcaaccacaacataaaaccgacacaaaattacataaaatctcgcaaaatagacctataatcgttgattttctaactttttcg 139  Q
    ||||||||||||||||||||||||| ||||||||||||| | |||||| |||||||||||||||| |||||||||||||||||||||| ||| |||| ||    
T  17285309 actttgcaggaatttggatcaaccaaaacataaaaccgatataaaattgcataaaatctcgcaaattagacctataatcgttgattttttaatttttccg 17285408  T
Q  140 agtgggccgtggcccaccccatcccatgaagggctccgccactgat 185  Q
     |||||||||||||||||||| ||||||||||||||||||||||||    
T  17285409 ggtgggccgtggcccaccccagcccatgaagggctccgccactgat 17285454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 40 - 181
Target Start/End: Original strand, 44052474 - 44052615
Alignment:
Q  40 actttgcaggaatttggatcaaccacaacataaaaccgacacaaaattacataaaatctcgcaaaatagacctataatcgttgattttctaactttttcg 139  Q
    |||||| ||||||||||||||| || ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||  || |||| ||    
T  44052474 actttgtaggaatttggatcaatcaaaacataaaaccaacacaaaattacataaaatctcgcaaaatagacctataatcgttgatttttaaatttttccg 44052573  T
Q  140 agtgggccgtggcccaccccatcccatgaagggctccgccac 181  Q
     ||| |||||||||||||||| ||||||||||||||||||||    
T  44052574 ggtgagccgtggcccaccccagcccatgaagggctccgccac 44052615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 40 - 184
Target Start/End: Original strand, 919725 - 919869
Alignment:
Q  40 actttgcaggaatttggatcaaccacaacataaaaccgacacaaaattacataaaatctcgcaaaatagacctataatcgttgattttctaactttttcg 139  Q
    ||||||||||||||||||||||||| ||||||||||| |||||||||| ||||||||||||||||||||| |||||||||||||||||  || |||| ||    
T  919725 actttgcaggaatttggatcaaccaaaacataaaaccaacacaaaattgcataaaatctcgcaaaatagatctataatcgttgatttttaaatttttccg 919824  T
Q  140 agtgggccgtggcccaccccatcccatgaagggctccgccactga 184  Q
      ||||||||||||||||||| |||||||||||||||| ||||||    
T  919825 gatgggccgtggcccaccccagcccatgaagggctccgtcactga 919869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 40 - 184
Target Start/End: Complemental strand, 37125835 - 37125691
Alignment:
Q  40 actttgcaggaatttggatcaaccacaacataaaaccgacacaaaattacataaaatctcgcaaaatagacctataatcgttgattttctaactttttcg 139  Q
    ||||||||||||||||||||||||| ||| |||||| ||| ||||||| |||||||| |||||||||||||||||||||||||||||| ||| |||| ||    
T  37125835 actttgcaggaatttggatcaaccaaaacgtaaaactgacgcaaaattgcataaaatatcgcaaaatagacctataatcgttgattttataatttttccg 37125736  T
Q  140 agtgggccgtggcccaccccatcccatgaagggctccgccactga 184  Q
     ||||||||||||||||| || |||||||||||||||||||||||    
T  37125735 ggtgggccgtggcccacctcagcccatgaagggctccgccactga 37125691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 40 - 183
Target Start/End: Complemental strand, 29170084 - 29169941
Alignment:
Q  40 actttgcaggaatttggatcaaccacaacataaaaccgacacaaaattacataaaatctcgcaaaatagacctataatcgttgattttctaactttttcg 139  Q
    |||||| |||||||||||||||||| ||||||||| ||| |||||||| |||||||||||||||| |||||||||||||||||||||| ||| |||| ||    
T  29170084 actttgtaggaatttggatcaaccaaaacataaaatcgatacaaaattgcataaaatctcgcaaattagacctataatcgttgattttttaatttttccg 29169985  T
Q  140 agtgggccgtggcccaccccatcccatgaagggctccgccactg 183  Q
     |||||| ||||||||||||| ||||||||||||||||||||||    
T  29169984 ggtgggctgtggcccaccccagcccatgaagggctccgccactg 29169941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 40 - 183
Target Start/End: Complemental strand, 42372112 - 42371969
Alignment:
Q  40 actttgcaggaatttggatcaaccacaacataaaaccgacacaaaattacataaaatctcgcaaaatagacctataatcgttgattttctaactttttcg 139  Q
    ||||||||||||||| ||||||||| |||||||||||||||||||||| ||||||||||| |||||||||||||||||| |||||||| ||| ||||  |    
T  42372112 actttgcaggaatttagatcaaccaaaacataaaaccgacacaaaattgcataaaatctcacaaaatagacctataatcattgattttttaatttttctg 42372013  T
Q  140 agtgggccgtggcccaccccatcccatgaagggctccgccactg 183  Q
     ||||||||||||||||||||  |||||||||||||||||||||    
T  42372012 ggtgggccgtggcccaccccaatccatgaagggctccgccactg 42371969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 40 - 185
Target Start/End: Complemental strand, 6849895 - 6849750
Alignment:
Q  40 actttgcaggaatttggatcaaccacaacataaaaccgacacaaaattacataaaatctcgcaaaatagacctataatcgttgattttctaactttttcg 139  Q
    |||||| || |||||| |||||||| ||||||||||||| ||||||||  ||||||||||||||| |||||||||||||||||||||| ||| |||| ||    
T  6849895 actttgtagaaatttgaatcaaccaaaacataaaaccgatacaaaattgtataaaatctcgcaaattagacctataatcgttgattttttaatttttccg 6849796  T
Q  140 agtgggccgtggcccaccccatcccatgaagggctccgccactgat 185  Q
     |||||||||||||||||||| ||||||||||||||||||||||||    
T  6849795 ggtgggccgtggcccaccccagcccatgaagggctccgccactgat 6849750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 40 - 185
Target Start/End: Original strand, 29981722 - 29981867
Alignment:
Q  40 actttgcaggaatttggatcaaccacaacataaaaccgacacaaaattacataaaatctcgcaaaatagacctataatcgttgattttctaactttttcg 139  Q
    ||||||||||||||||||| ||||| ||| |||||||||||||||||| |||||||| || |||| |||||||||||||||||||||| ||| |||| ||    
T  29981722 actttgcaggaatttggataaaccaaaacttaaaaccgacacaaaattgcataaaatatcacaaagtagacctataatcgttgattttttaatttttccg 29981821  T
Q  140 agtgggccgtggcccaccccatcccatgaagggctccgccactgat 185  Q
      ||||||||||||||||||| ||||||||||||||||||||||||    
T  29981822 gatgggccgtggcccaccccagcccatgaagggctccgccactgat 29981867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 40 - 184
Target Start/End: Complemental strand, 47561869 - 47561725
Alignment:
Q  40 actttgcaggaatttggatcaaccacaacataaaaccgacacaaaattacataaaatctcgcaaaatagacctataatcgttgattttctaactttttcg 139  Q
    ||||||||| ||||||||||||||| ||||||||||| |||||||||| |||||||| |||||||||||||||||||||||||||||| | | |||| ||    
T  47561869 actttgcagtaatttggatcaaccaaaacataaaacctacacaaaattgcataaaatatcgcaaaatagacctataatcgttgatttttttatttttccg 47561770  T
Q  140 agtgggccgtggcccaccccatcccatgaagggctccgccactga 184  Q
     |||||||||||||||||| | || ||||||||||||||||||||    
T  47561769 ggtgggccgtggcccacccaaacctatgaagggctccgccactga 47561725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 40 - 183
Target Start/End: Original strand, 48708432 - 48708576
Alignment:
Q  40 actttgcaggaatttggatcaaccacaacataaaaccgacacaaaattacataaaatctcgcaaaatagacctataatcgttga-ttttctaactttttc 138  Q
    ||||||||||||||||||||||| | ||||||||| ||| | |||||| ||||||||||||||||||||||||||||||||||| |||| ||| ||||||    
T  48708432 actttgcaggaatttggatcaacaaaaacataaaatcgatataaaattgcataaaatctcgcaaaatagacctataatcgttgatttttttaattttttc 48708531  T
Q  139 gagtgggccgtggcccaccccatcccatgaagggctccgccactg 183  Q
    |  ||||||||||| ||||||| ||||||||||||||||||||||    
T  48708532 ggatgggccgtggctcaccccagcccatgaagggctccgccactg 48708576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 40 - 183
Target Start/End: Complemental strand, 24790577 - 24790434
Alignment:
Q  40 actttgcaggaatttggatcaaccacaacataaaaccgacacaaaattacataaaatctcgcaaaatagacctataatcgttgattttctaactttttcg 139  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||| |||| |||| ||||||||||| | | ||||  |    
T  24790577 actttgcaggaatttggatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaacagacttatagtcgttgatttttttatttttctg 24790478  T
Q  140 agtgggccgtggcccaccccatcccatgaagggctccgccactg 183  Q
     ||||| |||||||||| ||| ||||||||||||||| ||||||    
T  24790477 ggtgggtcgtggcccactccagcccatgaagggctccaccactg 24790434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 40 - 182
Target Start/End: Original strand, 46224775 - 46224918
Alignment:
Q  40 actttgcaggaatttggatcaaccacaacataaaaccgacacaaaattacataaaatctcgcaaaatagacctataatcgttga-ttttctaactttttc 138  Q
    ||||||||||||||||||||||| | ||||||||| ||| |||||||| |||||||||||||||||||||  |||||||||| | |||| ||| ||||||    
T  46224775 actttgcaggaatttggatcaacaaaaacataaaatcgatacaaaattgcataaaatctcgcaaaatagatttataatcgttaatttttttaattttttc 46224874  T
Q  139 gagtgggccgtggcccaccccatcccatgaagggctccgccact 182  Q
    | |||| ||||||||||||||| |||||||||||||||||||||    
T  46224875 gggtggaccgtggcccaccccaacccatgaagggctccgccact 46224918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 40 - 139
Target Start/End: Original strand, 40428796 - 40428895
Alignment:
Q  40 actttgcaggaatttggatcaaccacaacataaaaccgacacaaaattacataaaatctcgcaaaatagacctataatcgttgattttctaactttttcg 139  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||| ||| |||||||    
T  40428796 actttgcaggaatttggatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagacctatagtcgttgattttttaattttttcg 40428895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 40 - 183
Target Start/End: Complemental strand, 51139828 - 51139692
Alignment:
Q  40 actttgcaggaatttggatcaaccacaacataaaaccgacacaaaattacataaaatctcgcaaaatagacctataatcgttgattttctaactttttcg 139  Q
    |||||||| |||||||||||||||| ||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||| ||| ||||| |    
T  51139828 actttgcaagaatttggatcaaccaaaacataaaaccgacacaaaattgtataaaatctcgcaaaatagacctataatcgttgattttttaattttttgg 51139729  T
Q  140 agtgggccgtggcccaccccatcccatgaagggctccgccactg 183  Q
     |||||       |||||||| ||||||||||||||| ||||||    
T  51139728 ggtggg-------ccaccccagcccatgaagggctccaccactg 51139692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 40 - 183
Target Start/End: Complemental strand, 8086372 - 8086229
Alignment:
Q  40 actttgcaggaatttggatcaaccacaacataaaaccgacacaaaattacataaaatctcgcaaaatagacctataatcgttgattttctaactttttcg 139  Q
    ||||||||||||||||||||||||| ||||||||||| ||| |||||| |||||||||| |||||||||| ||||| ||||||||||| ||| |||||||    
T  8086372 actttgcaggaatttggatcaaccaaaacataaaacctacataaaattgcataaaatctagcaaaatagatctatagtcgttgattttttaattttttcg 8086273  T
Q  140 agtgggccgtggcccaccccatcccatgaagggctccgccactg 183  Q
     |||| ||||| ||||||  | || |||||| ||||||||||||    
T  8086272 ggtggaccgtgacccaccttagcctatgaagagctccgccactg 8086229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 40 - 173
Target Start/End: Complemental strand, 23177484 - 23177351
Alignment:
Q  40 actttgcaggaatttggatcaaccacaacataaaaccgacacaaaattacataaaatctcgcaaaatagacctataatcgttgattttctaactttttcg 139  Q
    ||||||||| ||||||||||||||| || |||||| ||| |||||||| |||||||||||||||||||||| ||||||||||||||||  || |||| ||    
T  23177484 actttgcagaaatttggatcaaccaaaatataaaatcgatacaaaattgcataaaatctcgcaaaatagacttataatcgttgatttttaaatttttccg 23177385  T
Q  140 agtgggccgtggcccaccccatcccatgaagggc 173  Q
     |||| ||||||||||||||| |||| |||||||    
T  23177384 ggtggaccgtggcccaccccagcccacgaagggc 23177351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 40 - 136
Target Start/End: Original strand, 24544733 - 24544829
Alignment:
Q  40 actttgcaggaatttggatcaaccacaacataaaaccgacacaaaattacataaaatctcgcaaaatagacctataatcgttgattttctaactttt 136  Q
    ||||||||||||||||||||||||| | |||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||| ||| ||||    
T  24544733 actttgcaggaatttggatcaaccaaagcataaaaccgacacaaaattgcataaaatctcgcaaaatagacttataatcgttgattttttaattttt 24544829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 40 - 183
Target Start/End: Original strand, 25299103 - 25299246
Alignment:
Q  40 actttgcaggaatttggatcaaccacaacataaaaccgacacaaaattacataaaatctcgcaaaatagacctataatcgttgattttctaa-ctttttc 138  Q
    ||||||||||||||||||||||||| ||||||||||||||||||| || |||||||||||||||||||||||||||||| || ||||| |||  ||||||    
T  25299103 actttgcaggaatttggatcaaccaaaacataaaaccgacacaaagttgcataaaatctcgcaaaatagacctataatcatttattttttaatttttttc 25299202  T
Q  139 gagtgggccgtggcccaccccatcccatgaagggctccgccactg 183  Q
    |  |||||||||| |  ||||| |||||||| ||||||| |||||    
T  25299203 ggatgggccgtgg-cggccccagcccatgaaaggctccgtcactg 25299246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 40 - 183
Target Start/End: Original strand, 9042434 - 9042576
Alignment:
Q  40 actttgcaggaatttggatcaaccacaacataaaaccgacacaaaattacataaaatctcgcaaaatagacctataatcgttgattttctaactttttcg 139  Q
    |||||| |||||||||||||||||| ||||||||| ||| ||||| || |||||||||||| ||| ||||||||||||  |||||||| ||| |||| ||    
T  9042434 actttgtaggaatttggatcaaccaaaacataaaatcgatacaaa-ttgcataaaatctcgtaaattagacctataattattgattttttaatttttccg 9042532  T
Q  140 agtgggccgtggcccaccccatcccatgaagggctccgccactg 183  Q
      |||||||||||||| |||| ||||||||||||||||||||||    
T  9042533 gatgggccgtggcccagcccagcccatgaagggctccgccactg 9042576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 40 - 136
Target Start/End: Complemental strand, 44317709 - 44317613
Alignment:
Q  40 actttgcaggaatttggatcaaccacaacataaaaccgacacaaaattacataaaatctcgcaaaatagacctataatcgttgattttctaactttt 136  Q
    ||||| ||||||||| ||||||||| ||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||    
T  44317709 actttacaggaatttagatcaaccaaaacataaaatcaacacaaaattacataaaatctcgcaaaatagacctataatcgttgattttttaattttt 44317613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 40 - 183
Target Start/End: Complemental strand, 45836986 - 45836854
Alignment:
Q  40 actttgcaggaatttggatcaaccacaacataaaaccgacacaaaattacataaaatctcgcaaaatagacctataatcgttgattttctaactttttcg 139  Q
    ||||||||||||||| ||||||||| ||||||||||||| ||||||||  |||||||||||||| ||||||||||||||||||||||| ||| |||| |     
T  45836986 actttgcaggaatttagatcaaccaaaacataaaaccgatacaaaattgtataaaatctcgcaatatagacctataatcgttgattttttaatttttac- 45836888  T
Q  140 agtgggccgtggcccaccccatcccatgaagggctccgccactg 183  Q
              ||||||||||| ||||||||||||||||||||||    
T  45836887 ----------ggcccaccccagcccatgaagggctccgccactg 45836854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 49 - 184
Target Start/End: Original strand, 9246925 - 9247059
Alignment:
Q  49 gaatttggatcaaccacaacataaaaccgacacaaaattacataaaatctcgcaaaatagacctataatcgttgattttctaactttttcgagtgggccg 148  Q
    |||||||||| | ||  ||| ||||||||| ||||||||  |||||||||||||||||||| |||||||| || ||||| ||| ||||||| |||||  |    
T  9246925 gaatttggataagccgaaacctaaaaccgatacaaaattgtataaaatctcgcaaaatagatctataatccttaattttttaa-tttttcgggtgggttg 9247023  T
Q  149 tggcccaccccatcccatgaagggctccgccactga 184  Q
    ||||||||| || ||||||||||||||| |||||||    
T  9247024 tggcccacctcagcccatgaagggctccaccactga 9247059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 42 - 117
Target Start/End: Original strand, 33011961 - 33012036
Alignment:
Q  42 tttgcaggaatttggatcaaccacaacataaaaccgacacaaaattacataaaatctcgcaaaatagacctataat 117  Q
    ||||| ||||||||||||||||  ||| ||||||||||| |||||| |||||||||||||||||||||||||||||    
T  33011961 tttgcgggaatttggatcaaccgaaacctaaaaccgacataaaattgcataaaatctcgcaaaatagacctataat 33012036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 42 - 117
Target Start/End: Complemental strand, 40567219 - 40567144
Alignment:
Q  42 tttgcaggaatttggatcaaccacaacataaaaccgacacaaaattacataaaatctcgcaaaatagacctataat 117  Q
    ||||| ||||||||||||||||| ||| ||||||||||| ||||||  ||||||||||||||||||||||||||||    
T  40567219 tttgcgggaatttggatcaaccaaaacctaaaaccgacataaaattgtataaaatctcgcaaaatagacctataat 40567144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 42 - 117
Target Start/End: Original strand, 48708321 - 48708396
Alignment:
Q  42 tttgcaggaatttggatcaaccacaacataaaaccgacacaaaattacataaaatctcgcaaaatagacctataat 117  Q
    ||||| ||||||||||||||||| ||| ||||||||||| ||||||  ||||||||||||||||||||||||||||    
T  48708321 tttgcgggaatttggatcaaccaaaacctaaaaccgacataaaattgtataaaatctcgcaaaatagacctataat 48708396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 40 - 106
Target Start/End: Complemental strand, 40567108 - 40567042
Alignment:
Q  40 actttgcaggaatttggatcaaccacaacataaaaccgacacaaaattacataaaatctcgcaaaat 106  Q
    ||||||||||||||||||||||| | ||||||||||| |||||||||| ||||||||||||||||||    
T  40567108 actttgcaggaatttggatcaactaaaacataaaaccaacacaaaattgcataaaatctcgcaaaat 40567042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 42 - 117
Target Start/End: Complemental strand, 8086483 - 8086408
Alignment:
Q  42 tttgcaggaatttggatcaaccacaacataaaaccgacacaaaattacataaaatctcgcaaaatagacctataat 117  Q
    ||||| ||||||||||||||||  ||| ||||||||||| ||||||  ||||||||||||||||||||||||||||    
T  8086483 tttgcgggaatttggatcaaccgaaacctaaaaccgacataaaattgtataaaatctcgcaaaatagacctataat 8086408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 42 - 117
Target Start/End: Original strand, 29981611 - 29981686
Alignment:
Q  42 tttgcaggaatttggatcaaccacaacataaaaccgacacaaaattacataaaatctcgcaaaatagacctataat 117  Q
    ||||| ||||||||||||||||  ||| ||||||||||| ||||||  ||||||||||||||||||||||||||||    
T  29981611 tttgcgggaatttggatcaaccgaaacttaaaaccgacataaaattgtataaaatctcgcaaaatagacctataat 29981686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 42 - 117
Target Start/End: Complemental strand, 42372223 - 42372148
Alignment:
Q  42 tttgcaggaatttggatcaaccacaacataaaaccgacacaaaattacataaaatctcgcaaaatagacctataat 117  Q
    ||||||||||||||||||||||  ||| ||||||| ||| ||||||  ||||||||||||||||||||||||||||    
T  42372223 tttgcaggaatttggatcaaccgaaacctaaaaccaacataaaattgtataaaatctcgcaaaatagacctataat 42372148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 42 - 117
Target Start/End: Complemental strand, 45837097 - 45837022
Alignment:
Q  42 tttgcaggaatttggatcaaccacaacataaaaccgacacaaaattacataaaatctcgcaaaatagacctataat 117  Q
    |||||||||||||| |||||||  ||| ||||||||||| ||||||  ||||||||||||||||||||||||||||    
T  45837097 tttgcaggaatttgaatcaaccgaaacctaaaaccgacataaaattgtataaaatctcgcaaaatagacctataat 45837022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 42 - 117
Target Start/End: Complemental strand, 24790689 - 24790613
Alignment:
Q  42 tttgcaggaatttggatcaacc-acaacataaaaccgacacaaaattacataaaatctcgcaaaatagacctataat 117  Q
    ||||| |||||||||||||||| | ||| ||||||||||| ||||||  ||||||||||||||||||||||||||||    
T  24790689 tttgcgggaatttggatcaacccaaaacgtaaaaccgacataaaattgtataaaatctcgcaaaatagacctataat 24790613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 37 - 117
Target Start/End: Original strand, 25298987 - 25299067
Alignment:
Q  37 actactttgcaggaatttggatcaaccacaacataaaaccgacacaaaattacataaaatctcgcaaaatagacctataat 117  Q
    |||| ||||| ||||||||||||||||  ||  ||||||||||| ||||||  ||||||||||||||||||||||||||||    
T  25298987 actaatttgcgggaatttggatcaaccgaaatctaaaaccgacataaaattgtataaaatctcgcaaaatagacctataat 25299067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 42 - 117
Target Start/End: Original strand, 16692853 - 16692928
Alignment:
Q  42 tttgcaggaatttggatcaaccacaacataaaaccgacacaaaattacataaaatctcgcaaaatagacctataat 117  Q
    ||||| ||||||||||||||||  ||| ||||||||||| ||||||  |||||||||| |||||||||||||||||    
T  16692853 tttgcgggaatttggatcaaccgaaacctaaaaccgacataaaattgtataaaatctcacaaaatagacctataat 16692928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 42 - 117
Target Start/End: Original strand, 40428685 - 40428760
Alignment:
Q  42 tttgcaggaatttggatcaaccacaacataaaaccgacacaaaattacataaaatctcgcaaaatagacctataat 117  Q
    ||||| ||||||||||||||||  ||| ||||||||||| ||||||  |||||||||||||||||||| |||||||    
T  40428685 tttgcgggaatttggatcaaccgaaacctaaaaccgacataaaattgtataaaatctcgcaaaatagaactataat 40428760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 42 - 117
Target Start/End: Complemental strand, 47561980 - 47561905
Alignment:
Q  42 tttgcaggaatttggatcaaccacaacataaaaccgacacaaaattacataaaatctcgcaaaatagacctataat 117  Q
    ||||| ||||||||||||||||  ||| ||||||||||| ||||||  ||||||| ||||||||||||||||||||    
T  47561980 tttgcgggaatttggatcaaccgaaacctaaaaccgacataaaattgtataaaatttcgcaaaatagacctataat 47561905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 51 - 127
Target Start/End: Original strand, 32540620 - 32540696
Alignment:
Q  51 atttggatcaaccacaacataaaaccgacacaaaattacataaaatctcgcaaaatagacctataatcgttgatttt 127  Q
    |||||||| ||||  ||| ||||||||||||||||||  ||||||||||| |||||||||||||| ||||| |||||    
T  32540620 atttggataaaccgaaacctaaaaccgacacaaaattgtataaaatctcgtaaaatagacctatagtcgttaatttt 32540696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 49 - 117
Target Start/End: Original strand, 44052370 - 44052438
Alignment:
Q  49 gaatttggatcaaccacaacataaaaccgacacaaaattacataaaatctcgcaaaatagacctataat 117  Q
    ||||||| |||||||| ||| ||||||||||| ||||||  |||||||||| |||||||||||||||||    
T  44052370 gaatttgaatcaaccaaaacctaaaaccgacataaaattctataaaatctcacaaaatagacctataat 44052438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 42 - 117
Target Start/End: Original strand, 919614 - 919689
Alignment:
Q  42 tttgcaggaatttggatcaaccacaacataaaaccgacacaaaattacataaaatctcgcaaaatagacctataat 117  Q
    ||||| ||||||||||||||    ||| ||||||||||| ||||||  ||||||||||||||||||||||||||||    
T  919614 tttgctggaatttggatcaatggaaacctaaaaccgacataaaattgtataaaatctcgcaaaatagacctataat 919689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 42 - 117
Target Start/End: Complemental strand, 23177595 - 23177520
Alignment:
Q  42 tttgcaggaatttggatcaaccacaacataaaaccgacacaaaattacataaaatctcgcaaaatagacctataat 117  Q
    ||||| ||||||||||||||||  ||  ||||||||||| ||||||  ||||||||||||||||||||| ||||||    
T  23177595 tttgcgggaatttggatcaaccgaaatctaaaaccgacataaaattgtataaaatctcgcaaaatagacatataat 23177520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 42 - 117
Target Start/End: Original strand, 24542684 - 24542759
Alignment:
Q  42 tttgcaggaatttggatcaaccacaacataaaaccgacacaaaattacataaaatctcgcaaaatagacctataat 117  Q
    ||||| ||||||||||||||||  ||| ||||||||||| ||||||  ||||||| || |||||||||||||||||    
T  24542684 tttgcgggaatttggatcaaccgaaacctaaaaccgacataaaattgtataaaatttcacaaaatagacctataat 24542759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 42 - 117
Target Start/End: Original strand, 24542798 - 24542873
Alignment:
Q  42 tttgcaggaatttggatcaaccacaacataaaaccgacacaaaattacataaaatctcgcaaaatagacctataat 117  Q
    ||||| ||||||||||||||||  ||| ||||||||||| ||||||  ||||||| || |||||||||||||||||    
T  24542798 tttgcgggaatttggatcaaccgaaacctaaaaccgacataaaattgtataaaatttcacaaaatagacctataat 24542873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 42 - 117
Target Start/End: Original strand, 24542912 - 24542987
Alignment:
Q  42 tttgcaggaatttggatcaaccacaacataaaaccgacacaaaattacataaaatctcgcaaaatagacctataat 117  Q
    ||||| ||||||||||||||||  ||| ||||||||||| ||||||  ||||||| || |||||||||||||||||    
T  24542912 tttgcgggaatttggatcaaccgaaacctaaaaccgacataaaattgtataaaatttcacaaaatagacctataat 24542987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 42 - 117
Target Start/End: Original strand, 24543026 - 24543101
Alignment:
Q  42 tttgcaggaatttggatcaaccacaacataaaaccgacacaaaattacataaaatctcgcaaaatagacctataat 117  Q
    ||||| ||||||||||||||||  ||| ||||||||||| ||||||  ||||||| || |||||||||||||||||    
T  24543026 tttgcgggaatttggatcaaccgaaacctaaaaccgacataaaattgtataaaatttcacaaaatagacctataat 24543101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 42 - 117
Target Start/End: Original strand, 24543140 - 24543215
Alignment:
Q  42 tttgcaggaatttggatcaaccacaacataaaaccgacacaaaattacataaaatctcgcaaaatagacctataat 117  Q
    ||||| ||||||||||||||||  ||| ||||||||||| ||||||  ||||||| || |||||||||||||||||    
T  24543140 tttgcgggaatttggatcaaccgaaacctaaaaccgacataaaattgtataaaatttcacaaaatagacctataat 24543215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 42 - 117
Target Start/End: Original strand, 24543254 - 24543329
Alignment:
Q  42 tttgcaggaatttggatcaaccacaacataaaaccgacacaaaattacataaaatctcgcaaaatagacctataat 117  Q
    ||||| ||||||||||||||||  ||| ||||||||||| ||||||  ||||||| || |||||||||||||||||    
T  24543254 tttgcgggaatttggatcaaccgaaacctaaaaccgacataaaattgtataaaatttcacaaaatagacctataat 24543329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 42 - 117
Target Start/End: Original strand, 24543368 - 24543443
Alignment:
Q  42 tttgcaggaatttggatcaaccacaacataaaaccgacacaaaattacataaaatctcgcaaaatagacctataat 117  Q
    ||||| ||||||||||||||||  ||| ||||||||||| ||||||  ||||||| || |||||||||||||||||    
T  24543368 tttgcgggaatttggatcaaccgaaacctaaaaccgacataaaattgtataaaatttcacaaaatagacctataat 24543443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 42 - 117
Target Start/End: Original strand, 24543482 - 24543557
Alignment:
Q  42 tttgcaggaatttggatcaaccacaacataaaaccgacacaaaattacataaaatctcgcaaaatagacctataat 117  Q
    ||||| ||||||||||||||||  ||| ||||||||||| ||||||  ||||||| || |||||||||||||||||    
T  24543482 tttgcgggaatttggatcaaccgaaacctaaaaccgacataaaattgtataaaatttcacaaaatagacctataat 24543557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 42 - 117
Target Start/End: Original strand, 24543596 - 24543671
Alignment:
Q  42 tttgcaggaatttggatcaaccacaacataaaaccgacacaaaattacataaaatctcgcaaaatagacctataat 117  Q
    ||||| ||||||||||||||||  ||| ||||||||||| ||||||  ||||||| || |||||||||||||||||    
T  24543596 tttgcgggaatttggatcaaccgaaacctaaaaccgacataaaattgtataaaatttcacaaaatagacctataat 24543671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 42 - 117
Target Start/End: Original strand, 24543710 - 24543785
Alignment:
Q  42 tttgcaggaatttggatcaaccacaacataaaaccgacacaaaattacataaaatctcgcaaaatagacctataat 117  Q
    ||||| ||||||||||||||||  ||| ||||||||||| ||||||  ||||||| || |||||||||||||||||    
T  24543710 tttgcgggaatttggatcaaccgaaacctaaaaccgacataaaattgtataaaatttcacaaaatagacctataat 24543785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 42 - 117
Target Start/End: Original strand, 24543824 - 24543899
Alignment:
Q  42 tttgcaggaatttggatcaaccacaacataaaaccgacacaaaattacataaaatctcgcaaaatagacctataat 117  Q
    ||||| ||||||||||||||||  ||| ||||||||||| ||||||  ||||||| || |||||||||||||||||    
T  24543824 tttgcgggaatttggatcaaccgaaacctaaaaccgacataaaattgtataaaatttcacaaaatagacctataat 24543899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 42 - 117
Target Start/End: Original strand, 24543938 - 24544013
Alignment:
Q  42 tttgcaggaatttggatcaaccacaacataaaaccgacacaaaattacataaaatctcgcaaaatagacctataat 117  Q
    ||||| ||||||||||||||||  ||| ||||||||||| ||||||  ||||||| || |||||||||||||||||    
T  24543938 tttgcgggaatttggatcaaccgaaacctaaaaccgacataaaattgtataaaatttcacaaaatagacctataat 24544013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 42 - 117
Target Start/End: Original strand, 24544052 - 24544127
Alignment:
Q  42 tttgcaggaatttggatcaaccacaacataaaaccgacacaaaattacataaaatctcgcaaaatagacctataat 117  Q
    ||||| ||||||||||||||||  ||| ||||||||||| ||||||  ||||||| || |||||||||||||||||    
T  24544052 tttgcgggaatttggatcaaccgaaacctaaaaccgacataaaattgtataaaatttcacaaaatagacctataat 24544127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 42 - 117
Target Start/End: Original strand, 24544166 - 24544241
Alignment:
Q  42 tttgcaggaatttggatcaaccacaacataaaaccgacacaaaattacataaaatctcgcaaaatagacctataat 117  Q
    ||||| ||||||||||||||||  ||| ||||||||||| ||||||  ||||||| || |||||||||||||||||    
T  24544166 tttgcgggaatttggatcaaccgaaacctaaaaccgacataaaattgtataaaatttcacaaaatagacctataat 24544241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 42 - 117
Target Start/End: Original strand, 24544280 - 24544355
Alignment:
Q  42 tttgcaggaatttggatcaaccacaacataaaaccgacacaaaattacataaaatctcgcaaaatagacctataat 117  Q
    ||||| ||||||||||||||||  ||| ||||||||||| ||||||  ||||||| || |||||||||||||||||    
T  24544280 tttgcgggaatttggatcaaccgaaacctaaaaccgacataaaattgtataaaatttcacaaaatagacctataat 24544355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 42 - 117
Target Start/End: Original strand, 24544394 - 24544469
Alignment:
Q  42 tttgcaggaatttggatcaaccacaacataaaaccgacacaaaattacataaaatctcgcaaaatagacctataat 117  Q
    ||||| ||||||||||||||||  ||| ||||||||||| ||||||  ||||||| || |||||||||||||||||    
T  24544394 tttgcgggaatttggatcaaccgaaacctaaaaccgacataaaattgtataaaatttcacaaaatagacctataat 24544469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 42 - 117
Target Start/End: Original strand, 24544508 - 24544583
Alignment:
Q  42 tttgcaggaatttggatcaaccacaacataaaaccgacacaaaattacataaaatctcgcaaaatagacctataat 117  Q
    ||||| ||||||||||||||||  ||| ||||||||||| ||||||  ||||||| || |||||||||||||||||    
T  24544508 tttgcgggaatttggatcaaccgaaacctaaaaccgacataaaattgtataaaatttcacaaaatagacctataat 24544583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 42 - 117
Target Start/End: Original strand, 24544622 - 24544697
Alignment:
Q  42 tttgcaggaatttggatcaaccacaacataaaaccgacacaaaattacataaaatctcgcaaaatagacctataat 117  Q
    ||||| ||||||||||||||||  ||| ||||||||||| ||||||  ||||||| || |||||||||||||||||    
T  24544622 tttgcgggaatttggatcaaccgaaacctaaaaccgacataaaattgtataaaatttcacaaaatagacctataat 24544697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 42 - 117
Target Start/End: Original strand, 46224664 - 46224739
Alignment:
Q  42 tttgcaggaatttggatcaaccacaacataaaaccgacacaaaattacataaaatctcgcaaaatagacctataat 117  Q
    ||||| ||||||||||||||||  ||  ||||||||||| ||||||  |||||||||||||||||||| |||||||    
T  46224664 tttgcgggaatttggatcaaccgaaatctaaaaccgacataaaattgtataaaatctcgcaaaatagatctataat 46224739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 42 - 117
Target Start/End: Complemental strand, 51139939 - 51139864
Alignment:
Q  42 tttgcaggaatttggatcaaccacaacataaaaccgacacaaaattacataaaatctcgcaaaatagacctataat 117  Q
    ||||| ||||||||||||||||  ||| ||||||||||| ||||||  | |||||||||||||||| |||||||||    
T  51139939 tttgcgggaatttggatcaaccgaaacctaaaaccgacataaaattgtaaaaaatctcgcaaaataaacctataat 51139864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 70 - 172
Target Start/End: Complemental strand, 21852113 - 21852011
Alignment:
Q  70 taaaaccgacacaaaattacataaaatctcgcaaaatagacctataatcgttgattttctaactttttcgagtgggccgtggcccaccccatcccatgaa 169  Q
    |||||| |||||||||||  ||||||||||||||| || |||||| |||||| |||||  || ||||||| || | ||||||||||||| |  |||||||    
T  21852113 taaaacggacacaaaattgtataaaatctcgcaaagtatacctatcatcgttaatttttaaattttttcgggtagaccgtggcccaccctagtccatgaa 21852014  T
Q  170 ggg 172  Q
    |||    
T  21852013 ggg 21852011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 91 - 184
Target Start/End: Original strand, 1243682 - 1243774
Alignment:
Q  91 taaaatctcgcaaaatagacctataatcgttgattttctaactttttcgagtgggccgtggcccaccccatcccatgaagggctccgccactga 184  Q
    ||||||||||||||||||||||||||| ||| ||||| ||| |||| || ||| ||||||| | | || | |||||||||||||||||| ||||    
T  1243682 taaaatctcgcaaaatagacctataattgttaattttttaatttttccgggtgagccgtgg-ctatccgagcccatgaagggctccgcctctga 1243774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 133 - 181
Target Start/End: Complemental strand, 37343075 - 37343027
Alignment:
Q  133 tttttcgagtgggccgtggcccaccccatcccatgaagggctccgccac 181  Q
    |||| |||||||||||||||| |||||| ||||||||||||||||||||    
T  37343075 ttttccgagtgggccgtggccgaccccagcccatgaagggctccgccac 37343027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 34 - 117
Target Start/End: Complemental strand, 6850014 - 6849931
Alignment:
Q  34 tatactactttgcaggaatttggatcaaccacaacataaaaccgacacaaaattacataaaatctcgcaaaatagacctataat 117  Q
    ||||||| ||||||| ||||||||||||||  ||| ||||||||| | ||| ||  |||||||||| ||||||||| |||||||    
T  6850014 tatactaatttgcagaaatttggatcaaccgaaacctaaaaccgatataaatttgtataaaatctcacaaaatagatctataat 6849931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 50 - 117
Target Start/End: Original strand, 17285206 - 17285273
Alignment:
Q  50 aatttggatcaaccacaacataaaaccgacacaaaattacataaaatctcgcaaaatagacctataat 117  Q
    ||||||||||||||  ||| ||||||||||  ||||||  |||||||||| |||||||||||||||||    
T  17285206 aatttggatcaaccgaaacctaaaaccgacgtaaaattgtataaaatctcacaaaatagacctataat 17285273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 50 - 117
Target Start/End: Complemental strand, 29170187 - 29170120
Alignment:
Q  50 aatttggatcaaccacaacataaaaccgacacaaaattacataaaatctcgcaaaatagacctataat 117  Q
    ||||||||||||||  ||| ||||||||||| ||| ||  |||||||||| |||||||||||||||||    
T  29170187 aatttggatcaaccgaaacctaaaaccgacataaatttgtataaaatctcacaaaatagacctataat 29170120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 42 - 117
Target Start/End: Complemental strand, 37125946 - 37125871
Alignment:
Q  42 tttgcaggaatttggatcaaccacaacataaaaccgacacaaaattacataaaatctcgcaaaatagacctataat 117  Q
    ||||| ||||||| ||||||||  ||| |||||| || | ||||||  ||||||||||||||||||||||||||||    
T  37125946 tttgcgggaattttgatcaaccgaaacctaaaactgatataaaattgtataaaatctcgcaaaatagacctataat 37125871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 91 - 175
Target Start/End: Original strand, 17879927 - 17880011
Alignment:
Q  91 taaaatctcgcaaaatagacctataatcgttgattttctaactttttcgagtgggccgtggcccaccccatcccatgaagggctc 175  Q
    ||||||||||||||||| || ||||||  || | ||| ||| |||  || |||||||||| ||||||||| ||||||||||||||    
T  17879927 taaaatctcgcaaaataaacatataattattaaatttttaattttcccgggtgggccgtgacccaccccagcccatgaagggctc 17880011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 50 - 117
Target Start/End: Original strand, 9042331 - 9042398
Alignment:
Q  50 aatttggatcaaccacaacataaaaccgacacaaaattacataaaatctcgcaaaatagacctataat 117  Q
    ||||||||||||||  ||| ||||||||||  ||| ||  |||||||||| |||||||||||||||||    
T  9042331 aatttggatcaaccgaaacctaaaaccgacttaaatttgtataaaatctcacaaaatagacctataat 9042398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 142 - 181
Target Start/End: Original strand, 43532475 - 43532514
Alignment:
Q  142 tgggccgtggcccaccccatcccatgaagggctccgccac 181  Q
    ||||||||||||||||||| |||||| |||||||||||||    
T  43532475 tgggccgtggcccaccccaacccatggagggctccgccac 43532514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 40 - 181
Target Start/End: Original strand, 29055949 - 29056090
Alignment:
Q  40 actttgcaggaatttggatcaaccacaacataaaaccgacacaaaattacataaaatctcgcaaaatagacctataatcgttgattttctaactttttcg 139  Q
    ||||||||| ||||||||| | ||  ||  ||||| ||||||||||||  | ||| |||||||||||| | | ||||||||| ||||| | | ||||||     
T  29055949 actttgcagaaatttggataagccgaaatctaaaatcgacacaaaattgtacaaa-tctcgcaaaataaatcaataatcgttaatttttttaatttttct 29056047  T
Q  140 ag-tgggccgtggcccaccccatcccatgaagggctccgccac 181  Q
     | |||| |||||||||||| | || |||||||||||||||||    
T  29056048 ggatgggtcgtggcccaccctaacctatgaagggctccgccac 29056090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 94 - 179
Target Start/End: Complemental strand, 15842068 - 15841983
Alignment:
Q  94 aatctcgcaaaatagacctataatcgttgattttctaactttttcgagtgggccgtggcccaccccatcccatgaagggctccgcc 179  Q
    ||||||| |||||||| ||| | ||||| ||||| ||| |||| |  ||||| |||||||||||||| |||||||| || ||||||    
T  15842068 aatctcgtaaaatagagctacagtcgttaattttttaatttttccaggtgggtcgtggcccaccccagcccatgaaagggtccgcc 15841983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 91 - 136
Target Start/End: Complemental strand, 45807103 - 45807058
Alignment:
Q  91 taaaatctcgcaaaatagacctataatcgttgattttctaactttt 136  Q
    ||||||||||||||||||||||||||| ||| ||||| ||| ||||    
T  45807103 taaaatctcgcaaaatagacctataattgttaattttttaattttt 45807058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 112; Significance: 1e-56; HSPs: 52)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 40 - 183
Target Start/End: Original strand, 29126060 - 29126203
Alignment:
Q  40 actttgcaggaatttggatcaaccacaacataaaaccgacacaaaattacataaaatctcgcaaaatagacctataatcgttgattttctaactttttcg 139  Q
    ||||||||||||||| ||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||| |||| ||    
T  29126060 actttgcaggaatttagatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagacctataatcgttgattttttaatttttccg 29126159  T
Q  140 agtgggccgtggcccaccccatcccatgaagggctccgccactg 183  Q
     |||||||||||||||||||| ||||||||||||||||||||||    
T  29126160 ggtgggccgtggcccaccccagcccatgaagggctccgccactg 29126203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 109; E-Value: 7e-55
Query Start/End: Original strand, 40 - 184
Target Start/End: Original strand, 50527650 - 50527794
Alignment:
Q  40 actttgcaggaatttggatcaaccacaacataaaaccgacacaaaattacataaaatctcgcaaaatagacctataatcgttgattttctaactttttcg 139  Q
    ||||||||||||||||||||||||| ||||||||||||| |||||||| ||||||||||||||||||||| |||||| |||||||||| ||| |||||||    
T  50527650 actttgcaggaatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatctcgcaaaatagaactataaacgttgattttttaattttttcg 50527749  T
Q  140 agtgggccgtggcccaccccatcccatgaagggctccgccactga 184  Q
     |||||||||||||||||||| |||||||||||||||||||||||    
T  50527750 ggtgggccgtggcccaccccagcccatgaagggctccgccactga 50527794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 40 - 185
Target Start/End: Complemental strand, 52202124 - 52201979
Alignment:
Q  40 actttgcaggaatttggatcaaccacaacataaaaccgacacaaaattacataaaatctcgcaaaatagacctataatcgttgattttctaactttttcg 139  Q
    ||||||||| ||||||||||||||| ||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||| ||| |||| ||    
T  52202124 actttgcagaaatttggatcaaccaaaacataaaaccgacacaaaattgtataaaatctcgcaaaatagacctataatcgttgattttttaatttttccg 52202025  T
Q  140 agtgggccgtggcccaccccatcccatgaagggctccgccactgat 185  Q
     |||||||||| ||||||||| ||||||||||||||||||||||||    
T  52202024 ggtgggccgtgacccaccccagcccatgaagggctccgccactgat 52201979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 40 - 183
Target Start/End: Complemental strand, 18163860 - 18163717
Alignment:
Q  40 actttgcaggaatttggatcaaccacaacataaaaccgacacaaaattacataaaatctcgcaaaatagacctataatcgttgattttctaactttttcg 139  Q
    ||||||||||||||||||||||||| ||||||||||||| ||||||||  |||||||||||||||||||||||||||||||||||||| | | |||| ||    
T  18163860 actttgcaggaatttggatcaaccaaaacataaaaccgatacaaaattgaataaaatctcgcaaaatagacctataatcgttgatttttttatttttccg 18163761  T
Q  140 agtgggccgtggcccaccccatcccatgaagggctccgccactg 183  Q
     |||||||||||||||||||| ||||||||||||||||||||||    
T  18163760 ggtgggccgtggcccaccccagcccatgaagggctccgccactg 18163717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 40 - 185
Target Start/End: Original strand, 52571441 - 52571586
Alignment:
Q  40 actttgcaggaatttggatcaaccacaacataaaaccgacacaaaattacataaaatctcgcaaaatagacctataatcgttgattttctaactttttcg 139  Q
    |||||| |||||||||||||||||| ||||||||||||| |||||||| |||||||| ||||||| |||||||||||||||||||||| ||| |||| ||    
T  52571441 actttgtaggaatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatatcgcaaattagacctataatcgttgattttttaatttttccg 52571540  T
Q  140 agtgggccgtggcccaccccatcccatgaagggctccgccactgat 185  Q
     |||||||||||||||||||| ||||||||||||||||||||||||    
T  52571541 ggtgggccgtggcccaccccagcccatgaagggctccgccactgat 52571586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 40 - 185
Target Start/End: Original strand, 13594890 - 13595035
Alignment:
Q  40 actttgcaggaatttggatcaaccacaacataaaaccgacacaaaattacataaaatctcgcaaaatagacctataatcgttgattttctaactttttcg 139  Q
    |||||| ||||||||| |||| ||| |||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||| ||| ||||||     
T  13594890 actttgtaggaatttgaatcagccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagatctataatcgttgattttttaattttttca 13594989  T
Q  140 agtgggccgtggcccaccccatcccatgaagggctccgccactgat 185  Q
     |||||||||||||||||||| ||||||| ||||||||||||||||    
T  13594990 ggtgggccgtggcccaccccagcccatgacgggctccgccactgat 13595035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 40 - 184
Target Start/End: Original strand, 12251524 - 12251668
Alignment:
Q  40 actttgcaggaatttggatcaaccacaacataaaaccgacacaaaattacataaaatctcgcaaaatagacctataatcgttgattttctaactttttcg 139  Q
    ||||||||||||||||||||||||| ||||||||| ||||||||||||| |||||||||| |||||||||||||||||||||||||||  || |||| ||    
T  12251524 actttgcaggaatttggatcaaccaaaacataaaatcgacacaaaattatataaaatctcacaaaatagacctataatcgttgatttttaaatttttccg 12251623  T
Q  140 agtgggccgtggcccaccccatcccatgaagggctccgccactga 184  Q
     ||||||||||| |||||||| |||||||||||||| ||||||||    
T  12251624 ggtgggccgtggtccaccccagcccatgaagggctctgccactga 12251668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 40 - 180
Target Start/End: Complemental strand, 22729362 - 22729222
Alignment:
Q  40 actttgcaggaatttggatcaaccacaacataaaaccgacacaaaattacataaaatctcgcaaaatagacctataatcgttgattttctaactttttcg 139  Q
    |||||| |||||||||||||||||| |||||||||||||||||||||| |||||||||||| |||||||||||||| ||||||||||| ||| |||| ||    
T  22729362 actttgtaggaatttggatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgaaaaatagacctatagtcgttgattttttaatttttccg 22729263  T
Q  140 agtgggccgtggcccaccccatcccatgaagggctccgcca 180  Q
     |||||||||||||||||||| ||||| |||||||||||||    
T  22729262 ggtgggccgtggcccaccccagcccattaagggctccgcca 22729222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 42 - 183
Target Start/End: Original strand, 7160309 - 7160450
Alignment:
Q  42 tttgcaggaatttggatcaaccacaacataaaaccgacacaaaattacataaaatctcgcaaaatagacctataatcgttgattttctaactttttcgag 141  Q
    ||||| ||||||||||| ||||  ||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||| || |    
T  7160309 tttgcgggaatttggattaaccgaaacctaaaactgacacaaaattacataaaatctcgcaaaatagacctataatcgttgattttttaatttttccggg 7160408  T
Q  142 tgggccgtggcccaccccatcccatgaagggctccgccactg 183  Q
    ||||||||||||||||||| |||||||| |||||||||||||    
T  7160409 tgggccgtggcccaccccagcccatgaaaggctccgccactg 7160450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 40 - 184
Target Start/End: Complemental strand, 36633629 - 36633485
Alignment:
Q  40 actttgcaggaatttggatcaaccacaacataaaaccgacacaaaattacataaaatctcgcaaaatagacctataatcgttgattttctaactttttcg 139  Q
    ||||||||||||||||||||||||| ||||||||| ||| ||||||||  |||||||||| ||||||||||||||||||||||||||| ||| |||| ||    
T  36633629 actttgcaggaatttggatcaaccaaaacataaaatcgatacaaaattgtataaaatctcacaaaatagacctataatcgttgattttttaatttttccg 36633530  T
Q  140 agtgggccgtggcccaccccatcccatgaagggctccgccactga 184  Q
      |||| |||||||||||||| |||||||||||||||||||||||    
T  36633529 gatgggtcgtggcccaccccagcccatgaagggctccgccactga 36633485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 41 - 183
Target Start/End: Original strand, 28952409 - 28952551
Alignment:
Q  41 ctttgcaggaatttggatcaaccacaacataaaaccgacacaaaattacataaaatctcgcaaaatagacctataatcgttgattttctaactttttcga 140  Q
    |||||||  ||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||| ||| |||| |      
T  28952409 ctttgcaaaaatttggatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagacccataatcgttgattttttaatttttccag 28952508  T
Q  141 gtgggccgtggcccaccccatcccatgaagggctccgccactg 183  Q
    ||||  |||||||||||||| ||||||||||||||||||||||    
T  28952509 gtggatcgtggcccaccccagcccatgaagggctccgccactg 28952551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 40 - 177
Target Start/End: Original strand, 1092894 - 1093031
Alignment:
Q  40 actttgcaggaatttggatcaaccacaacataaaaccgacacaaaattacataaaatctcgcaaaatagacctataatcgttgattttctaactttttcg 139  Q
    ||||| ||||||||||||||||||| ||||||||||| |||||||||| |||||||||||||||||||||| |||| ||||||||||| ||| |||| ||    
T  1092894 actttacaggaatttggatcaaccaaaacataaaacccacacaaaattgcataaaatctcgcaaaatagacttatagtcgttgattttttaatttttccg 1092993  T
Q  140 agtgggccgtggcccaccccatcccatgaagggctccg 177  Q
     ||||||||||||||||| || ||||||||||||||||    
T  1092994 ggtgggccgtggcccacctcagcccatgaagggctccg 1093031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 40 - 180
Target Start/End: Original strand, 32270936 - 32271074
Alignment:
Q  40 actttgcaggaatttggatcaaccacaacataaaaccgacacaaaattacataaaatctcgcaaaatagacctataatcgttgattttctaactttttcg 139  Q
    ||||||||||||||||||||||||| || ||||||||||||||||||| ||||||||||||||||||||||  |||||| |||||||| ||| |||| ||    
T  32270936 actttgcaggaatttggatcaaccaaaatataaaaccgacacaaaattgcataaaatctcgcaaaatagac--ataatcattgattttttaatttttccg 32271033  T
Q  140 agtgggccgtggcccaccccatcccatgaagggctccgcca 180  Q
     |||||| ||||||||||||| |||||||| ||||||||||    
T  32271034 ggtgggctgtggcccaccccagcccatgaaaggctccgcca 32271074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 40 - 180
Target Start/End: Original strand, 21259451 - 21259591
Alignment:
Q  40 actttgcaggaatttggatcaaccacaacataaaaccgacacaaaattacataaaatctcgcaaaatagacctataatcgttgattttctaactttttcg 139  Q
    |||||||||||||||| |||||||| ||||||||| |||||||||||| ||||||||||| |||||||||||||||||||||||||||  || |||| ||    
T  21259451 actttgcaggaatttgaatcaaccaaaacataaaatcgacacaaaattgcataaaatctcacaaaatagacctataatcgttgatttttaaatttttccg 21259550  T
Q  140 agtgggccgtggcccaccccatcccatgaagggctccgcca 180  Q
      |||| |||||||||| ||| |||||||||||||||||||    
T  21259551 gatgggtcgtggcccactccaacccatgaagggctccgcca 21259591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 40 - 183
Target Start/End: Complemental strand, 49169935 - 49169792
Alignment:
Q  40 actttgcaggaatttggatcaaccacaacataaaaccgacacaaaattacataaaatctcgcaaaatagacctataatcgttgattttctaactttttcg 139  Q
    ||||||||| |||| |||||||||| ||||||||||||||||||||||  ||||||| |||||||||||||||||||||||||||||| | ||||||  |    
T  49169935 actttgcagaaattcggatcaaccaaaacataaaaccgacacaaaattgtataaaatttcgcaaaatagacctataatcgttgatttttttacttttctg 49169836  T
Q  140 agtgggccgtggcccaccccatcccatgaagggctccgccactg 183  Q
     |||||  ||||||||||||| ||||| ||||||||||||||||    
T  49169835 ggtgggttgtggcccaccccagcccataaagggctccgccactg 49169792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 40 - 156
Target Start/End: Complemental strand, 27742628 - 27742512
Alignment:
Q  40 actttgcaggaatttggatcaaccacaacataaaaccgacacaaaattacataaaatctcgcaaaatagacctataatcgttgattttctaactttttcg 139  Q
    ||||||||| ||||||||||||||| |||||||||||||||||||||| ||||||||||| |||||||||||||||| |||||||||| ||| |||| ||    
T  27742628 actttgcagaaatttggatcaaccaaaacataaaaccgacacaaaattgcataaaatctctcaaaatagacctataagcgttgattttttaatttttccg 27742529  T
Q  140 agtgggccgtggcccac 156  Q
     ||||||||||||||||    
T  27742528 ggtgggccgtggcccac 27742512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 187 - 270
Target Start/End: Complemental strand, 49453394 - 49453311
Alignment:
Q  187 tcatggacataatatgatatgatacagtaccaatgtctatgataattaatattatgaatttaatcagaacaattatgacattta 270  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  49453394 tcatggacataatatgatatgatacaataccaatgtctatgataattaatattatgaatttaattagaacaattatgacattta 49453311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 183 - 268
Target Start/End: Original strand, 38362725 - 38362810
Alignment:
Q  183 gatgtcatggacataatatgatatgatacagtaccaatgtctatgataattaatattatgaatttaatcagaacaattatgacatt 268  Q
    ||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  38362725 gatgtcatggacatactatgatatggtacagtaccaatgtctatgataattaatattatgaatttaattagaacaattatgacatt 38362810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 40 - 183
Target Start/End: Original strand, 16908835 - 16908968
Alignment:
Q  40 actttgcaggaatttggatcaaccacaacataaaaccgacacaaaattacataaaatctcgcaaaatagacctataatcgttgattttctaactttttcg 139  Q
    ||||||| ||||||||||||||||| |||||||||||||||          ||||||||||||||||||||||||||||||||| ||| | | |||| ||    
T  16908835 actttgctggaatttggatcaaccaaaacataaaaccgaca----------taaaatctcgcaaaatagacctataatcgttgaattttttatttttccg 16908924  T
Q  140 agtgggccgtggcccaccccatcccatgaagggctccgccactg 183  Q
     |||||||||||||||||||| |||||||||||||| |||||||    
T  16908925 ggtgggccgtggcccaccccagcccatgaagggctctgccactg 16908968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 40 - 147
Target Start/End: Complemental strand, 44205555 - 44205447
Alignment:
Q  40 actttgcaggaatttggatcaaccacaacataaaaccgacacaaaa-ttacataaaatctcgcaaaatagacctataatcgttgattttctaactttttc 138  Q
    |||||||| ||||||||||||||||  ||||||||||||||||||| || ||||||||||||||||||||| ||||||||||||||||| ||| ||||||    
T  44205555 actttgcaagaatttggatcaaccaacacataaaaccgacacaaaaattgcataaaatctcgcaaaatagatctataatcgttgattttttaattttttc 44205456  T
Q  139 gagtgggcc 147  Q
    | |||||||    
T  44205455 gggtgggcc 44205447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 40 - 184
Target Start/End: Original strand, 49657228 - 49657370
Alignment:
Q  40 actttgcaggaatttggatcaaccacaacataaaaccgacacaaaattacataaaatctcgcaaaatagacctataatcgttgattttctaactttttcg 139  Q
    ||||||||||||||||||||||||| ||||||||||||||  |||||| |||||||| ||  |||||||||||||| ||||||||||| ||| |||| ||    
T  49657228 actttgcaggaatttggatcaaccaaaacataaaaccgacgtaaaattgcataaaatttcaaaaaatagacctatagtcgttgattttttaatttttccg 49657327  T
Q  140 agtgggccgtggcccaccccatcccatgaagggctccgccactga 184  Q
     |||||||||| |||| |||| |||||||| ||||||||| ||||    
T  49657328 ggtgggccgtgaccca-cccagcccatgaa-ggctccgccgctga 49657370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 40 - 147
Target Start/End: Original strand, 44254617 - 44254724
Alignment:
Q  40 actttgcaggaatttggatcaaccacaacataaaaccgacacaaaattacataaaatctcgcaaaatagacctataatcgttgattttctaactttttcg 139  Q
    |||||||||||||||| |||||||| |||||||||||||||||||||| |||||||||||||||||||||  ||||||| |||||||| ||| |||| ||    
T  44254617 actttgcaggaatttgaatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagatatataatcattgattttttaatttttccg 44254716  T
Q  140 agtgggcc 147  Q
     |||||||    
T  44254717 ggtgggcc 44254724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 40 - 118
Target Start/End: Original strand, 11232171 - 11232249
Alignment:
Q  40 actttgcaggaatttggatcaaccacaacataaaaccgacacaaaattacataaaatctcgcaaaatagacctataatc 118  Q
    |||||||| |||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  11232171 actttgcaagaatttggatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagacctataatc 11232249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 40 - 147
Target Start/End: Complemental strand, 35083935 - 35083828
Alignment:
Q  40 actttgcaggaatttggatcaaccacaacataaaaccgacacaaaattacataaaatctcgcaaaatagacctataatcgttgattttctaactttttcg 139  Q
    ||||| ||||||||||||||||||| |||||||||||||||||||||| |||||||||||| ||||| ||||||||||| ||  |||| ||| |||| ||    
T  35083935 actttacaggaatttggatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgtaaaattgacctataatcattagttttttaatttttccg 35083836  T
Q  140 agtgggcc 147  Q
     |||||||    
T  35083835 ggtgggcc 35083828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 40 - 183
Target Start/End: Complemental strand, 34660888 - 34660753
Alignment:
Q  40 actttgcaggaatttggatcaaccacaacataaaaccgacacaaaattacataaaatctcgcaaaatagacctataatcgttgattttctaactttttcg 139  Q
    ||||||||  ||||||||||| ||| ||| ||||||||||||||||||| ||||||||||| ||||||||||||| |||||        ||| |||||||    
T  34660888 actttgcaaaaatttggatcagccaaaacctaaaaccgacacaaaattatataaaatctcgtaaaatagacctatgatcgt--------taattttttcg 34660797  T
Q  140 agtgggccgtggcccaccccatcccatgaagggctccgccactg 183  Q
      |||||||||||||||||||  |||||||| ||||||||||||    
T  34660796 gatgggccgtggcccaccccaatccatgaagagctccgccactg 34660753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 37 - 183
Target Start/End: Complemental strand, 45045354 - 45045209
Alignment:
Q  37 actactttgcaggaatttggatcaaccacaacataaaaccgacacaaaattacataaaatctcgcaaaatagacctataatcgttgattttctaactttt 136  Q
    |||| ||||| ||||||||||||||||  ||  ||||||| ||| |||||||  ||||||||||||||||| | |||||||| |||||||| ||| ||||    
T  45045354 actagtttgcgggaatttggatcaaccgaaatctaaaaccaacaaaaaattatttaaaatctcgcaaaataaatctataatcattgattttttaattttt 45045255  T
Q  137 tcgagtgggccgtggcccaccccatcccatgaagggctccgccactg 183  Q
    ||| ||||||| | |||||||||| ||||||||| ||||||| ||||    
T  45045254 tcg-gtgggccatcgcccaccccaacccatgaagagctccgcaactg 45045209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 42 - 184
Target Start/End: Original strand, 25246243 - 25246387
Alignment:
Q  42 tttgcaggaatttggatcaaccacaacataaaaccgacacaaaattacataaaatctcgcaaaatagacctataatcgttgattttctaa--ctttttcg 139  Q
    ||||| ||||||||||||||||  ||| |||||  |||| ||||||  ||||||||||||||||||||||||||| |||||||||| | |   ||||||     
T  25246243 tttgcgggaatttggatcaaccgaaacctaaaaaagacataaaattgtataaaatctcgcaaaatagacctataaacgttgatttttttattttttttca 25246342  T
Q  140 agtgggccgtggcccaccccatcccatgaagggctccgccactga 184  Q
     ||||| |||||||||||||| | |||||| ||||||||||||||    
T  25246343 ggtgggtcgtggcccaccccagctcatgaaaggctccgccactga 25246387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 40 - 183
Target Start/End: Complemental strand, 2619025 - 2618884
Alignment:
Q  40 actttgcaggaatttggatcaaccacaacataaaaccgacacaaaattacataaaatctcgcaaaatagacctataatcgttgattttctaactttttcg 139  Q
    ||||||||||| |||| ||||||   ||| ||||||| ||||||  ||  |||||||||||||||||||||||||  | ||| ||||| ||| |||||||    
T  2619025 actttgcaggagtttgaatcaacagaaacttaaaaccaacacaa--ttgtataaaatctcgcaaaatagacctatggtggttaattttttaattttttcg 2618928  T
Q  140 agtgggccgtggcccaccccatcccatgaagggctccgccactg 183  Q
      |||||||||||||||| || ||||||||||||||||||||||    
T  2618927 gatgggccgtggcccacctcaacccatgaagggctccgccactg 2618884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 42 - 117
Target Start/End: Original strand, 13594779 - 13594854
Alignment:
Q  42 tttgcaggaatttggatcaaccacaacataaaaccgacacaaaattacataaaatctcgcaaaatagacctataat 117  Q
    ||||| ||||||||||||||||  ||||||||||||||| ||||||  ||||||||||||||||||||||||||||    
T  13594779 tttgcgggaatttggatcaaccgaaacataaaaccgacataaaattgtataaaatctcgcaaaatagacctataat 13594854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 42 - 117
Target Start/End: Original strand, 32270825 - 32270900
Alignment:
Q  42 tttgcaggaatttggatcaaccacaacataaaaccgacacaaaattacataaaatctcgcaaaatagacctataat 117  Q
    ||||||||||||||||||||||  ||| ||||||||||| ||||||  ||||||||||||||||||||||||||||    
T  32270825 tttgcaggaatttggatcaaccgaaacctaaaaccgacataaaattgtataaaatctcgcaaaatagacctataat 32270900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 42 - 117
Target Start/End: Original strand, 11232060 - 11232135
Alignment:
Q  42 tttgcaggaatttggatcaaccacaacataaaaccgacacaaaattacataaaatctcgcaaaatagacctataat 117  Q
    ||||| ||||||||||||||||  ||| ||||||||||| ||||||  ||||||||||||||||||||||||||||    
T  11232060 tttgcgggaatttggatcaaccgaaacctaaaaccgacataaaattgtataaaatctcgcaaaatagacctataat 11232135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 42 - 117
Target Start/End: Original strand, 21259226 - 21259301
Alignment:
Q  42 tttgcaggaatttggatcaaccacaacataaaaccgacacaaaattacataaaatctcgcaaaatagacctataat 117  Q
    ||||| ||||||||||||||||  ||| ||||||||||| ||||||| ||||||||| ||||||||||||||||||    
T  21259226 tttgcgggaatttggatcaaccgaaacctaaaaccgacataaaattatataaaatctagcaaaatagacctataat 21259301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 42 - 117
Target Start/End: Original strand, 21259340 - 21259415
Alignment:
Q  42 tttgcaggaatttggatcaaccacaacataaaaccgacacaaaattacataaaatctcgcaaaatagacctataat 117  Q
    ||||| ||||||||||||||||  ||| ||||||||||| ||||||| ||||||||| ||||||||||||||||||    
T  21259340 tttgcgggaatttggatcaaccgaaacctaaaaccgacataaaattatataaaatctagcaaaatagacctataat 21259415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 42 - 117
Target Start/End: Complemental strand, 22729473 - 22729398
Alignment:
Q  42 tttgcaggaatttggatcaaccacaacataaaaccgacacaaaattacataaaatctcgcaaaatagacctataat 117  Q
    ||||| ||||||||||||||||  ||| ||||||||||| ||||||  ||||||||||||||||||||||||||||    
T  22729473 tttgcgggaatttggatcaaccgaaacctaaaaccgacataaaattgtataaaatctcgcaaaatagacctataat 22729398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 40 - 183
Target Start/End: Original strand, 31174576 - 31174719
Alignment:
Q  40 actttgcaggaatttggatcaaccacaacataaaaccgacacaaaattacataaaatctcgcaaaatagacctataatcgttgattttctaactttttcg 139  Q
    |||||||  |||||||||||||||| ||| ||||||||||||||||||  ||||||| ||||||  |||| |||| |||| | ||||| ||| |||||      
T  31174576 actttgctagaatttggatcaaccaaaacctaaaaccgacacaaaattgtataaaatatcgcaaggtagatctatgatcgataattttttaattttttga 31174675  T
Q  140 agtgggccgtggcccaccccatcccatgaagggctccgccactg 183  Q
     ||||| |||||||||||| |  |||||||||||| | ||||||    
T  31174676 ggtgggtcgtggcccaccctagtccatgaagggctacaccactg 31174719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 42 - 117
Target Start/End: Original strand, 44254506 - 44254581
Alignment:
Q  42 tttgcaggaatttggatcaaccacaacataaaaccgacacaaaattacataaaatctcgcaaaatagacctataat 117  Q
    ||||| ||||||||||||||||  ||| ||||||||||| ||||||  ||||||||||||||||||||||||||||    
T  44254506 tttgcgggaatttggatcaaccgaaacctaaaaccgacataaaattgtataaaatctcgcaaaatagacctataat 44254581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 52 - 136
Target Start/End: Complemental strand, 4618280 - 4618197
Alignment:
Q  52 tttggatcaaccacaacataaaaccgacacaaaattacataaaatctcgcaaaatagacctataatcgttgattttctaactttt 136  Q
    ||||||||||| | || |||||||||||||||||||  ||||||||| |||||||||| ||||||||||||||||| ||| ||||    
T  4618280 tttggatcaacaaaaa-ataaaaccgacacaaaattgtataaaatcttgcaaaatagatctataatcgttgattttttaattttt 4618197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 49 - 117
Target Start/End: Original strand, 50527546 - 50527614
Alignment:
Q  49 gaatttggatcaaccacaacataaaaccgacacaaaattacataaaatctcgcaaaatagacctataat 117  Q
    |||||||||||||||  ||| ||||||||||| ||||||  ||||||||||||||||||||||||||||    
T  50527546 gaatttggatcaaccgaaacctaaaaccgacataaaattgtataaaatctcgcaaaatagacctataat 50527614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 42 - 117
Target Start/End: Original strand, 28952297 - 28952372
Alignment:
Q  42 tttgcaggaatttggatcaaccacaacataaaaccgacacaaaattacataaaatctcgcaaaatagacctataat 117  Q
    ||||| ||||||||||||||||  ||| ||||||||||| ||||||  ||||||||||||||||||||||| ||||    
T  28952297 tttgcgggaatttggatcaaccgaaacctaaaaccgacataaaattgtataaaatctcgcaaaatagacctgtaat 28952372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 42 - 117
Target Start/End: Original strand, 29125949 - 29126024
Alignment:
Q  42 tttgcaggaatttggatcaaccacaacataaaaccgacacaaaattacataaaatctcgcaaaatagacctataat 117  Q
    ||||| ||||||||||||||||  ||| ||||||||||| |||||   ||||||||||||||||||||||||||||    
T  29125949 tttgcgggaatttggatcaaccgaaacctaaaaccgacataaaatcgtataaaatctcgcaaaatagacctataat 29126024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 42 - 117
Target Start/End: Complemental strand, 35084046 - 35083971
Alignment:
Q  42 tttgcaggaatttggatcaaccacaacataaaaccgacacaaaattacataaaatctcgcaaaatagacctataat 117  Q
    ||||| ||||||||||||||||  ||| ||||||| ||| ||||||  ||||||||||||||||||||||||||||    
T  35084046 tttgcgggaatttggatcaaccgaaacctaaaaccaacataaaattgtataaaatctcgcaaaatagacctataat 35083971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 42 - 117
Target Start/End: Complemental strand, 36633740 - 36633665
Alignment:
Q  42 tttgcaggaatttggatcaaccacaacataaaaccgacacaaaattacataaaatctcgcaaaatagacctataat 117  Q
    ||||||||||||||||||||||  ||  ||||||||||| ||||||  |||| |||||||||||||||||||||||    
T  36633740 tttgcaggaatttggatcaaccgaaatctaaaaccgacataaaattgtataatatctcgcaaaatagacctataat 36633665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 42 - 117
Target Start/End: Original strand, 49657117 - 49657192
Alignment:
Q  42 tttgcaggaatttggatcaaccacaacataaaaccgacacaaaattacataaaatctcgcaaaatagacctataat 117  Q
    ||||| ||||||||||||||||  ||| ||||||||||| ||||||  |||||||||||||||||||| |||||||    
T  49657117 tttgcgggaatttggatcaaccgaaacctaaaaccgacataaaattgtataaaatctcgcaaaatagatctataat 49657192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 40 - 117
Target Start/End: Complemental strand, 45045465 - 45045388
Alignment:
Q  40 actttgcaggaatttggatcaaccacaacataaaaccgacacaaaattacataaaatctcgcaaaatagacctataat 117  Q
    ||||||||||||||||||| || |  ||| ||||||| ||| ||||||  ||||||||||||||||||||||||||||    
T  45045465 actttgcaggaatttggattaatcgaaacctaaaaccaacataaaattgtataaaatctcgcaaaatagacctataat 45045388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 42 - 117
Target Start/End: Original strand, 1092783 - 1092858
Alignment:
Q  42 tttgcaggaatttggatcaaccacaacataaaaccgacacaaaattacataaaatctcgcaaaatagacctataat 117  Q
    ||||| ||||||||||||||||  ||| ||||||||||  ||||||  |||||||||||||||||||| |||||||    
T  1092783 tttgcgggaatttggatcaaccgaaacctaaaaccgacgtaaaattgtataaaatctcgcaaaatagatctataat 1092858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 42 - 117
Target Start/End: Original strand, 16908724 - 16908799
Alignment:
Q  42 tttgcaggaatttggatcaaccacaacataaaaccgacacaaaattacataaaatctcgcaaaatagacctataat 117  Q
    ||||| |||||||||||||| |  ||| ||||||||||| ||||||  ||||||||| ||||||||||||||||||    
T  16908724 tttgcgggaatttggatcaatcgaaacctaaaaccgacataaaattgtataaaatctagcaaaatagacctataat 16908799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 42 - 117
Target Start/End: Original strand, 12251413 - 12251488
Alignment:
Q  42 tttgcaggaatttggatcaaccacaacataaaaccgacacaaaattacataaaatctcgcaaaatagacctataat 117  Q
    ||||| ||||||||||||||||  ||  ||||| ||||| ||||||  ||||| ||||||||||||||||||||||    
T  12251413 tttgctggaatttggatcaaccgaaatctaaaatcgacataaaattgtataaattctcgcaaaatagacctataat 12251488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 48 - 117
Target Start/End: Complemental strand, 27742733 - 27742664
Alignment:
Q  48 ggaatttggatcaaccacaacataaaaccgacacaaaattacataaaatctcgcaaaatagacctataat 117  Q
    |||||| |||||||||  ||| ||||| ||||| ||||||  ||||||||| ||||||||||||||||||    
T  27742733 ggaattgggatcaaccgaaacctaaaaacgacataaaattgtataaaatcttgcaaaatagacctataat 27742664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 46 - 86
Target Start/End: Complemental strand, 743998 - 743958
Alignment:
Q  46 caggaatttggatcaaccacaacataaaaccgacacaaaat 86  Q
    ||||||||| ||||||||| |||||||||||||||||||||    
T  743998 caggaattttgatcaaccaaaacataaaaccgacacaaaat 743958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 91 - 178
Target Start/End: Original strand, 7441643 - 7441737
Alignment:
Q  91 taaaatctcgcaaaatagacctataatcgttgattttctaactttttcgagtgggc-------cgtggcccaccccatcccatgaagggctccgc 178  Q
    |||||||| ||||| |||||||||  ||||||||||| ||| ||||||  ||||||       |||||||||||||| |||||||||||||||||    
T  7441643 taaaatcttgcaaagtagacctatggtcgttgattttttaattttttcaggtgggccacgggccgtggcccaccccagcccatgaagggctccgc 7441737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 42 - 117
Target Start/End: Complemental strand, 52202235 - 52202160
Alignment:
Q  42 tttgcaggaatttggatcaaccacaacataaaaccgacacaaaattacataaaatctcgcaaaatagacctataat 117  Q
    ||||| |||||| ||||||||   ||| ||||||||||| ||||||  ||||||||||| |||||||| |||||||    
T  52202235 tttgcgggaattgggatcaactgaaacctaaaaccgacataaaattgtataaaatctcgtaaaatagatctataat 52202160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 48 - 117
Target Start/End: Complemental strand, 49170040 - 49169971
Alignment:
Q  48 ggaatttggatcaaccacaacataaaaccgacacaaaattacataaaatctcgcaaaatagacctataat 117  Q
    |||||||||||||| |  ||| ||||||||||| ||||||  ||||| ||| |||||||||||| |||||    
T  49170040 ggaatttggatcaatcgaaacctaaaaccgacataaaattgtataaagtcttgcaaaatagacccataat 49169971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 110; Significance: 2e-55; HSPs: 62)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 40 - 185
Target Start/End: Complemental strand, 9830750 - 9830605
Alignment:
Q  40 actttgcaggaatttggatcaaccacaacataaaaccgacacaaaattacataaaatctcgcaaaatagacctataatcgttgattttctaactttttcg 139  Q
    ||||||||||||||||||||||||| ||||||||| ||||||||| || ||||||||||||||||||| ||||||||||||||||||| ||| |||||||    
T  9830750 actttgcaggaatttggatcaaccaaaacataaaatcgacacaaagttgcataaaatctcgcaaaataaacctataatcgttgattttttaattttttcg 9830651  T
Q  140 agtgggccgtggcccaccccatcccatgaagggctccgccactgat 185  Q
     |||||||||||||||||||| ||||||||||||||||||||||||    
T  9830650 ggtgggccgtggcccaccccagcccatgaagggctccgccactgat 9830605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 40 - 183
Target Start/End: Original strand, 41837971 - 41838114
Alignment:
Q  40 actttgcaggaatttggatcaaccacaacataaaaccgacacaaaattacataaaatctcgcaaaatagacctataatcgttgattttctaactttttcg 139  Q
    |||||||| |||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||| |||| ||    
T  41837971 actttgcatgaatttggatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagacctataatcgttgattttttaatttttccg 41838070  T
Q  140 agtgggccgtggcccaccccatcccatgaagggctccgccactg 183  Q
     | |||||||||||||||||| ||||||||||||||||||||||    
T  41838071 ggcgggccgtggcccaccccagcccatgaagggctccgccactg 41838114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 40 - 183
Target Start/End: Original strand, 3886797 - 3886940
Alignment:
Q  40 actttgcaggaatttggatcaaccacaacataaaaccgacacaaaattacataaaatctcgcaaaatagacctataatcgttgattttctaactttttcg 139  Q
    ||||||||||||||||||||||||| ||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||| ||| |||| ||    
T  3886797 actttgcaggaatttggatcaaccaaaacataaaatcgacacaaaattgcataaaatctcgcaaaatagacctataatcgttgattttttaatttttccg 3886896  T
Q  140 agtgggccgtggcccaccccatcccatgaagggctccgccactg 183  Q
     |||  |||||||| |||||| ||||||||||||||||||||||    
T  3886897 ggtgaaccgtggcctaccccagcccatgaagggctccgccactg 3886940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 40 - 183
Target Start/End: Complemental strand, 4231362 - 4231220
Alignment:
Q  40 actttgcaggaatttggatcaaccacaacataaaaccgacacaaaattacataaaatctcgcaaaatagacctataatcgttgattttctaactttttcg 139  Q
    ||||||||||||||| ||||||||| |||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||| ||| |||||||    
T  4231362 actttgcaggaatttagatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgtaaaatagacctataatcgttgattttttaa-tttttcg 4231264  T
Q  140 agtgggccgtggcccaccccatcccatgaagggctccgccactg 183  Q
     |||||||||||||||||| | ||||||||||| ||||||||||    
T  4231263 ggtgggccgtggcccaccctagcccatgaaggggtccgccactg 4231220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 40 - 183
Target Start/End: Complemental strand, 7012480 - 7012337
Alignment:
Q  40 actttgcaggaatttggatcaaccacaacataaaaccgacacaaaattacataaaatctcgcaaaatagacctataatcgttgattttctaactttttcg 139  Q
    ||||||||||||||||||||||||| ||||||||||||| |||||||| ||||| || ||||||||||||||||||||| |||||||| ||| |||| ||    
T  7012480 actttgcaggaatttggatcaaccaaaacataaaaccgatacaaaattgcataagatatcgcaaaatagacctataatcattgattttttaatttttccg 7012381  T
Q  140 agtgggccgtggcccaccccatcccatgaagggctccgccactg 183  Q
    |||| |||||||||||||||| ||||||||||||||||||||||    
T  7012380 agtgagccgtggcccaccccagcccatgaagggctccgccactg 7012337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 40 - 183
Target Start/End: Original strand, 24797070 - 24797213
Alignment:
Q  40 actttgcaggaatttggatcaaccacaacataaaaccgacacaaaattacataaaatctcgcaaaatagacctataatcgttgattttctaactttttcg 139  Q
    ||||||||||||||||||||||||| ||||||||||||| |||||||| |||||||||| ||||||||||||||||||||||||||||  || |||| ||    
T  24797070 actttgcaggaatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatcttgcaaaatagacctataatcgttgatttttaaatttttccg 24797169  T
Q  140 agtgggccgtggcccaccccatcccatgaagggctccgccactg 183  Q
      ||||||||||||||||||| ||||||||||||||||||||||    
T  24797170 gatgggccgtggcccaccccagcccatgaagggctccgccactg 24797213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 40 - 182
Target Start/End: Complemental strand, 6317019 - 6316877
Alignment:
Q  40 actttgcaggaatttggatcaaccacaacataaaaccgacacaaaattacataaaatctcgcaaaatagacctataatcgttgattttctaactttttcg 139  Q
    |||||||| |||||||||||||||| ||||||||| |||||||||||| ||||||||||| ||||||||||||||||| ||||||||| ||| |||||||    
T  6317019 actttgcaagaatttggatcaaccaaaacataaaatcgacacaaaattgcataaaatctcacaaaatagacctataattgttgattttttaattttttcg 6316920  T
Q  140 agtgggccgtggcccaccccatcccatgaagggctccgccact 182  Q
     |||||||||||||||||||| |||||||| ||||||||||||    
T  6316919 ggtgggccgtggcccaccccagcccatgaaaggctccgccact 6316877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 40 - 180
Target Start/End: Original strand, 5590190 - 5590330
Alignment:
Q  40 actttgcaggaatttggatcaaccacaacataaaaccgacacaaaattacataaaatctcgcaaaatagacctataatcgttgattttctaactttttcg 139  Q
    |||||| |||||||||||||||||| |||||||||||||||||||||| |||||||||||| |||||||||||||| ||||||||||| ||| |||| ||    
T  5590190 actttgtaggaatttggatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgaaaaatagacctatagtcgttgattttttaatttttccg 5590289  T
Q  140 agtgggccgtggcccaccccatcccatgaagggctccgcca 180  Q
     |||||||||||||||||||| ||||| |||||||||||||    
T  5590290 ggtgggccgtggcccaccccagcccattaagggctccgcca 5590330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 40 - 183
Target Start/End: Original strand, 3659839 - 3659982
Alignment:
Q  40 actttgcaggaatttggatcaaccacaacataaaaccgacacaaaattacataaaatctcgcaaaatagacctataatcgttgattttctaactttttcg 139  Q
    ||||||||||||||||||||||||| ||| |||| | ||||||||||| |||||||||||||||||||||| |||||||||||||||| ||| |||| ||    
T  3659839 actttgcaggaatttggatcaaccaaaacgtaaacctgacacaaaattgcataaaatctcgcaaaatagacttataatcgttgattttataatttttccg 3659938  T
Q  140 agtgggccgtggcccaccccatcccatgaagggctccgccactg 183  Q
     |||||| |||||||| |||| ||||||||||||||||||||||    
T  3659939 ggtgggctgtggcccatcccagcccatgaagggctccgccactg 3659982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 47 - 184
Target Start/End: Complemental strand, 1098193 - 1098056
Alignment:
Q  47 aggaatttggatcaaccacaacataaaaccgacacaaaattacataaaatctcgcaaaatagacctataatcgttgattttctaactttttcgagtgggc 146  Q
    |||||||||||||||||| |||||||||| || |||||||| |||||||| ||||||| |||||||||||||||||||||| ||| |||| || ||||||    
T  1098193 aggaatttggatcaaccaaaacataaaactgatacaaaattgcataaaatatcgcaaattagacctataatcgttgattttttaatttttccgggtgggc 1098094  T
Q  147 cgtggcccaccccatcccatgaagggctccgccactga 184  Q
    ||||||||||| ||  ||||||||||||||||||||||    
T  1098093 cgtggcccacctcacgccatgaagggctccgccactga 1098056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 37 - 182
Target Start/End: Complemental strand, 1183968 - 1183823
Alignment:
Q  37 actactttgcaggaatttggatcaaccacaacataaaaccgacacaaaattacataaaatctcgcaaaatagacctataatcgttgattttctaactttt 136  Q
    ||||||||  ||||||||| |||||||| ||||||||||||| |||||||| ||||||||||||||||||||| ||||||||||| ||||| ||| ||||    
T  1183968 actactttttaggaatttgaatcaaccaaaacataaaaccgatacaaaattgcataaaatctcgcaaaatagatctataatcgtttattttttaattttt 1183869  T
Q  137 tcgagtgggccgtggcccaccccatcccatgaagggctccgccact 182  Q
    |    ||||||||||||||||||| |||||||||||||||||||||    
T  1183868 tttgttgggccgtggcccaccccagcccatgaagggctccgccact 1183823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 40 - 183
Target Start/End: Complemental strand, 38567272 - 38567127
Alignment:
Q  40 actttgcaggaatttggatcaaccacaacataaaaccgacacaaaattacataaaatctcgcaaaatagacctataatcgttgattttctaactttttc- 138  Q
    ||||||||||||||||||||||| | ||||||||| | |||||||||| ||||||||||||||||||| ||||||||||||||||||| ||| |||| |     
T  38567272 actttgcaggaatttggatcaacaaaaacataaaatcaacacaaaattgcataaaatctcgcaaaatatacctataatcgttgattttttaatttttcct 38567173  T
Q  139 gagtgggccgtggccca-ccccatcccatgaagggctccgccactg 183  Q
    | ||||||||||||||| ||||| ||||||||||||||||||||||    
T  38567172 gggtgggccgtggcccacccccagcccatgaagggctccgccactg 38567127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 40 - 160
Target Start/End: Original strand, 42556110 - 42556230
Alignment:
Q  40 actttgcaggaatttggatcaaccacaacataaaaccgacacaaaattacataaaatctcgcaaaatagacctataatcgttgattttctaactttttcg 139  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||| |||| ||    
T  42556110 actttgcaggaatttggatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagacctataatcgttgattttttaatttttccg 42556209  T
Q  140 agtgggccgtggcccacccca 160  Q
      ||| ||||||||| |||||    
T  42556210 gatggaccgtggcccgcccca 42556230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 40 - 147
Target Start/End: Complemental strand, 2317204 - 2317097
Alignment:
Q  40 actttgcaggaatttggatcaaccacaacataaaaccgacacaaaattacataaaatctcgcaaaatagacctataatcgttgattttctaactttttcg 139  Q
    |||||||| |||||||||||||||| ||||||||||| ||||||||||  |||||||||||||||||||||||||||||||||||||| ||| |||| ||    
T  2317204 actttgcatgaatttggatcaaccaaaacataaaaccaacacaaaattgtataaaatctcgcaaaatagacctataatcgttgattttttaatttttccg 2317105  T
Q  140 agtgggcc 147  Q
    ||||||||    
T  2317104 agtgggcc 2317097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 42 - 183
Target Start/End: Complemental strand, 10092395 - 10092257
Alignment:
Q  42 tttgcaggaatttggatcaaccacaacataaaaccgacacaaaattacataaaatctcgcaaaatagacctataatcgttgattttctaactttttcgag 141  Q
    ||||||||||||||||||||| | |||| |||||| |||||||||| ||||||||||||||||||||||||||||||||||  ||| ||| ||||||| |    
T  10092395 tttgcaggaatttggatcaactaaaacaaaaaaccaacacaaaattgcataaaatctcgcaaaatagacctataatcgttgtatttttaattttttcggg 10092296  T
Q  142 tgggccgtggcccaccccatcccatgaagggctccgccactg 183  Q
    ||    ||||||||||||| |||||||||||||||| |||||    
T  10092295 tg---agtggcccaccccagcccatgaagggctccgtcactg 10092257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 40 - 147
Target Start/End: Complemental strand, 43117491 - 43117384
Alignment:
Q  40 actttgcaggaatttggatcaaccacaacataaaaccgacacaaaattacataaaatctcgcaaaatagacctataatcgttgattttctaactttttcg 139  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||  |||||||||||||||||||||||||||| ||||||||| ||| |||| ||    
T  43117491 actttgcaggaatttggatcaaccaaaacataaaaccgacacaaaattgtataaaatctcgcaaaatagacctataattgttgattttttaatttttccg 43117392  T
Q  140 agtgggcc 147  Q
     |||||||    
T  43117391 ggtgggcc 43117384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 40 - 146
Target Start/End: Original strand, 22658363 - 22658469
Alignment:
Q  40 actttgcaggaatttggatcaaccacaacataaaaccgacacaaaattacataaaatctcgcaaaatagacctataatcgttgattttctaactttttcg 139  Q
    |||||||||||||||||||||| || |||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||| ||| |||| ||    
T  22658363 actttgcaggaatttggatcaatcaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagacctataagcgttgattttttaatttttccg 22658462  T
Q  140 agtgggc 146  Q
     ||||||    
T  22658463 ggtgggc 22658469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 40 - 183
Target Start/End: Complemental strand, 21434982 - 21434842
Alignment:
Q  40 actttgcaggaatttggatcaaccacaacataaaaccgacacaaaattacataaaatctcgcaaaatagacctataatcgttgattttctaactttttcg 139  Q
    ||||||||||||||||||||||||| ||||||||||| |||||||||| ||||||| ||||||||||| ||||||||||||||||||| ||| |||| ||    
T  21434982 actttgcaggaatttggatcaaccaaaacataaaaccaacacaaaattgcataaaacctcgcaaaataaacctataatcgttgattttttaatttttccg 21434883  T
Q  140 agtgggccgtggcccaccccatcccatgaagggctccgccactg 183  Q
      ||||||   |||||| |||  ||||||| |||||||||||||    
T  21434882 gatgggcc---gcccactccagtccatgaaaggctccgccactg 21434842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 42 - 136
Target Start/End: Original strand, 7242653 - 7242747
Alignment:
Q  42 tttgcaggaatttggatcaaccacaacataaaaccgacacaaaattacataaaatctcgcaaaatagacctataatcgttgattttctaactttt 136  Q
    ||||||||||||||||||||||| ||||||||||| |||||||||| ||||||||||||||||||| ||||||||||||||||||| ||| ||||    
T  7242653 tttgcaggaatttggatcaaccaaaacataaaaccaacacaaaattgcataaaatctcgcaaaataaacctataatcgttgattttttaattttt 7242747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 40 - 184
Target Start/End: Complemental strand, 11635902 - 11635757
Alignment:
Q  40 actttgcaggaatttggatcaaccacaacataaaaccgacacaaaattacataaaatctcgcaaaatagacctataatcgttgattt-tctaactttttc 138  Q
    ||||||| | |||||||||||  |  ||| ||||||||||||||||||| ||||||| ||||||||||||||||| ||| ||||||| | ||| ||||||    
T  11635902 actttgcggaaatttggatcagtcgaaacctaaaaccgacacaaaattatataaaatttcgcaaaatagacctatgatcattgatttatttaattttttc 11635803  T
Q  139 gagtgggccgtggcccaccccatcccatgaagggctccgccactga 184  Q
    | ||||| |||||||||||| | |||||||||||||||||||||||    
T  11635802 gggtgggtcgtggcccaccctagcccatgaagggctccgccactga 11635757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 40 - 124
Target Start/End: Complemental strand, 28565027 - 28564943
Alignment:
Q  40 actttgcaggaatttggatcaaccacaacataaaaccgacacaaaattacataaaatctcgcaaaatagacctataatcgttgat 124  Q
    |||||||| |||||||||||||||| |||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||    
T  28565027 actttgcaagaatttggatcaaccaaaacataaaactgacacaaaattgcataaaatctcgcaaaatagacctataatcgttgat 28564943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 40 - 124
Target Start/End: Complemental strand, 28572650 - 28572566
Alignment:
Q  40 actttgcaggaatttggatcaaccacaacataaaaccgacacaaaattacataaaatctcgcaaaatagacctataatcgttgat 124  Q
    |||||||| |||||||||||||||| |||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||    
T  28572650 actttgcaagaatttggatcaaccaaaacataaaactgacacaaaattgcataaaatctcgcaaaatagacctataatcgttgat 28572566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 40 - 147
Target Start/End: Complemental strand, 36060500 - 36060393
Alignment:
Q  40 actttgcaggaatttggatcaaccacaacataaaaccgacacaaaattacataaaatctcgcaaaatagacctataatcgttgattttctaactttttcg 139  Q
    ||||| ||||||||||||||||||| |||||||||  ||||||||||| ||||||||||||||||||| ||||||||||||||||||| ||| |||| ||    
T  36060500 actttccaggaatttggatcaaccaaaacataaaattgacacaaaattgcataaaatctcgcaaaatatacctataatcgttgattttttaatttttccg 36060401  T
Q  140 agtgggcc 147  Q
     |||||||    
T  36060400 ggtgggcc 36060393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 40 - 127
Target Start/End: Complemental strand, 7413174 - 7413087
Alignment:
Q  40 actttgcaggaatttggatcaaccacaacataaaaccgacacaaaattacataaaatctcgcaaaatagacctataatcgttgatttt 127  Q
    ||||||| |||||||||||||| || ||| ||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||    
T  7413174 actttgcgggaatttggatcaatcaaaacctaaaaccgacacaaaattgtataaaatctcgcaaaatagacctataatcgttgatttt 7413087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 40 - 139
Target Start/End: Complemental strand, 4697949 - 4697850
Alignment:
Q  40 actttgcaggaatttggatcaaccacaacataaaaccgacacaaaattacataaaatctcgcaaaatagacctataatcgttgattttctaactttttcg 139  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||| | ||| || |||||||||  |||||||| ||| |||||||    
T  4697949 actttgcaggaatttggatcaaccaaaacataaaaccgacacaaaattgcataaaatcttgtaaagtaaacctataattattgattttttaattttttcg 4697850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 40 - 139
Target Start/End: Complemental strand, 41388148 - 41388049
Alignment:
Q  40 actttgcaggaatttggatcaaccacaacataaaaccgacacaaaattacataaaatctcgcaaaatagacctataatcgttgattttctaactttttcg 139  Q
    ||||||||||||||||||| ||||| | ||||||||||||||||||||  ||||||||| |||||||| ||||||||| ||||||||| ||| |||||||    
T  41388148 actttgcaggaatttggataaaccaaatcataaaaccgacacaaaattgtataaaatcttgcaaaataaacctataatagttgattttttaattttttcg 41388049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 40 - 127
Target Start/End: Original strand, 25642749 - 25642836
Alignment:
Q  40 actttgcaggaatttggatcaaccacaacataaaaccgacacaaaattacataaaatctcgcaaaatagacctataatcgttgatttt 127  Q
    |||||||  |||||||||||||||| ||| ||||||||||||||||||| |||||||||||||||||||||||||  ||||| |||||    
T  25642749 actttgcgagaatttggatcaaccaaaacctaaaaccgacacaaaattatataaaatctcgcaaaatagacctatggtcgttaatttt 25642836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 48 - 136
Target Start/End: Original strand, 7422073 - 7422161
Alignment:
Q  48 ggaatttggatcaaccacaacataaaaccgacacaaaattacataaaatctcgcaaaatagacctataatcgttgattttctaactttt 136  Q
    ||||||||||||||||  ||  ||||||||||||||||||  |||||||||||||||||| ||||||||||||||||||| ||| ||||    
T  7422073 ggaatttggatcaaccgaaatctaaaaccgacacaaaattgtataaaatctcgcaaaataaacctataatcgttgattttttaattttt 7422161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 42 - 117
Target Start/End: Complemental strand, 43117603 - 43117528
Alignment:
Q  42 tttgcaggaatttggatcaaccacaacataaaaccgacacaaaattacataaaatctcgcaaaatagacctataat 117  Q
    ||||||||||||||||||||||  ||| ||||||||||| ||||||  ||||||||||||||||||||||||||||    
T  43117603 tttgcaggaatttggatcaaccgaaacctaaaaccgacataaaattgtataaaatctcgcaaaatagacctataat 43117528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 42 - 120
Target Start/End: Complemental strand, 197343 - 197265
Alignment:
Q  42 tttgcaggaatttggatcaaccacaacataaaaccgacacaaaattacataaaatctcgcaaaatagacctataatcgt 120  Q
    ||||||| ||||||||||||||  ||| ||||||||||| ||||||  |||||||||||||||||||||||||||||||    
T  197343 tttgcagaaatttggatcaaccgaaacttaaaaccgacataaaattgtataaaatctcgcaaaatagacctataatcgt 197265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 42 - 120
Target Start/End: Complemental strand, 312180 - 312102
Alignment:
Q  42 tttgcaggaatttggatcaaccacaacataaaaccgacacaaaattacataaaatctcgcaaaatagacctataatcgt 120  Q
    ||||||| ||||||||||||||  ||| ||||||||||| ||||||  |||||||||||||||||||||||||||||||    
T  312180 tttgcagaaatttggatcaaccgaaacttaaaaccgacataaaattgtataaaatctcgcaaaatagacctataatcgt 312102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 42 - 119
Target Start/End: Complemental strand, 38567383 - 38567306
Alignment:
Q  42 tttgcaggaatttggatcaaccacaacataaaaccgacacaaaattacataaaatctcgcaaaatagacctataatcg 119  Q
    ||||| ||||||||||||||||  ||| ||||||||||| ||||||  ||||||||||||||||||||||||||||||    
T  38567383 tttgcgggaatttggatcaaccgaaacctaaaaccgacataaaattgtataaaatctcgcaaaatagacctataatcg 38567306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 40 - 117
Target Start/End: Complemental strand, 41169954 - 41169877
Alignment:
Q  40 actttgcaggaatttggatcaaccacaacataaaaccgacacaaaattacataaaatctcgcaaaatagacctataat 117  Q
    ||||||| ||||||||||| ||||| ||| || |||||||| ||||||| ||||||||||||||||||||||||||||    
T  41169954 actttgcgggaatttggattaaccaaaacctagaaccgacataaaattatataaaatctcgcaaaatagacctataat 41169877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 42 - 117
Target Start/End: Original strand, 3886686 - 3886761
Alignment:
Q  42 tttgcaggaatttggatcaaccacaacataaaaccgacacaaaattacataaaatctcgcaaaatagacctataat 117  Q
    ||||| |||||| |||||||||| ||| ||||||||||| ||||||  ||||||||||||||||||||||||||||    
T  3886686 tttgcgggaattgggatcaaccaaaacctaaaaccgacataaaattgtataaaatctcgcaaaatagacctataat 3886761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 42 - 117
Target Start/End: Original strand, 5590079 - 5590154
Alignment:
Q  42 tttgcaggaatttggatcaaccacaacataaaaccgacacaaaattacataaaatctcgcaaaatagacctataat 117  Q
    ||||| ||||||||||||||||  ||| ||||||||||| ||||||  ||||||||||||||||||||||||||||    
T  5590079 tttgcgggaatttggatcaaccgaaacctaaaaccgacataaaattgtataaaatctcgcaaaatagacctataat 5590154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 42 - 117
Target Start/End: Original strand, 7242541 - 7242616
Alignment:
Q  42 tttgcaggaatttggatcaaccacaacataaaaccgacacaaaattacataaaatctcgcaaaatagacctataat 117  Q
    ||||| ||||||||||||||||| ||| ||||||||||| ||||||  ||||||||||||||||||||| ||||||    
T  7242541 tttgcgggaatttggatcaaccaaaacctaaaaccgacataaaattgtataaaatctcgcaaaatagacatataat 7242616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 42 - 117
Target Start/End: Complemental strand, 21435093 - 21435018
Alignment:
Q  42 tttgcaggaatttggatcaaccacaacataaaaccgacacaaaattacataaaatctcgcaaaatagacctataat 117  Q
    ||||| ||||||||||||||||| ||| ||||||||||| ||||||  ||||||||| ||||||||||||||||||    
T  21435093 tttgcgggaatttggatcaaccaaaacctaaaaccgacataaaattgtataaaatctagcaaaatagacctataat 21435018  T

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Target: chr8; HSP #38
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 40 - 127
Target Start/End: Original strand, 25383055 - 25383141
Alignment:
Q  40 actttgcaggaatttggatcaaccacaacataaaaccgacacaaaattacataaaatctcgcaaaatagacctataatcgttgatttt 127  Q
    |||||||  |||||||||||||| | ||| ||||||||||||||||| | |||||||||||||||||||||||||| ||||| |||||    
T  25383055 actttgcgagaatttggatcaactaaaacctaaaaccgacacaaaat-atataaaatctcgcaaaatagacctatagtcgttaatttt 25383141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 42 - 117
Target Start/End: Complemental strand, 36060611 - 36060536
Alignment:
Q  42 tttgcaggaatttggatcaaccacaacataaaaccgacacaaaattacataaaatctcgcaaaatagacctataat 117  Q
    ||||| ||||||||||||||||  ||| ||||||||||| ||||||  ||||||||||||||||||||||||||||    
T  36060611 tttgcgggaatttggatcaaccgaaacttaaaaccgacataaaattgtataaaatctcgcaaaatagacctataat 36060536  T

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Target: chr8; HSP #40
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 91 - 183
Target Start/End: Original strand, 34934325 - 34934415
Alignment:
Q  91 taaaatctcgcaaaatagacctataatcgttgattttctaactttttcgagtgggccgtggcccaccccatcccatgaagggctccgccactg 183  Q
    |||| ||||||||| ||||||||||||  |  ||| | ||| ||||||| |||||||||||||||||||| ||||||||||||||||||||||    
T  34934325 taaagtctcgcaaattagacctataat--taaattatttaaatttttcgggtgggccgtggcccaccccagcccatgaagggctccgccactg 34934415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 42 - 117
Target Start/End: Complemental strand, 1184076 - 1184001
Alignment:
Q  42 tttgcaggaatttggatcaaccacaacataaaaccgacacaaaattacataaaatctcgcaaaatagacctataat 117  Q
    ||||| ||||||||||||||||  ||| ||||||||||| ||||||  ||||||||||||||| ||||||||||||    
T  1184076 tttgcgggaatttggatcaaccgaaacctaaaaccgacataaaattgtataaaatctcgcaaattagacctataat 1184001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 42 - 117
Target Start/End: Complemental strand, 7012591 - 7012516
Alignment:
Q  42 tttgcaggaatttggatcaaccacaacataaaaccgacacaaaattacataaaatctcgcaaaatagacctataat 117  Q
    ||||| |||||||||||||||   ||| ||||||||||| ||||||  ||||||||||||||||||||||||||||    
T  7012591 tttgcgggaatttggatcaactgaaacctaaaaccgacataaaattgtataaaatctcgcaaaatagacctataat 7012516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 53 - 176
Target Start/End: Complemental strand, 8996478 - 8996355
Alignment:
Q  53 ttggatcaaccacaacataaaaccgacacaaaattacataaaatctcgcaaaatagacctataatcgttgattttctaactttttcgagtgggccgtggc 152  Q
    |||||||||||  ||| |||||||||||||||||| |||||||||||| |||||| ||||||  || || ||||| | | |||| |  ||| ||||||||    
T  8996478 ttggatcaacctaaacttaaaaccgacacaaaattgcataaaatctcgtaaaataaacctatggtcattaatttttttaattttccaggtgagccgtggc 8996379  T
Q  153 ccaccccatcccatgaagggctcc 176  Q
    |||||| | |||| ||||||||||    
T  8996378 ccaccctaacccaagaagggctcc 8996355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 42 - 117
Target Start/End: Complemental strand, 28565138 - 28565063
Alignment:
Q  42 tttgcaggaatttggatcaaccacaacataaaaccgacacaaaattacataaaatctcgcaaaatagacctataat 117  Q
    ||||| ||||||||||||||||  ||| ||||||||||| ||||||  |||||||||| |||||||||||||||||    
T  28565138 tttgcgggaatttggatcaaccgaaacctaaaaccgacataaaattgtataaaatctcacaaaatagacctataat 28565063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 42 - 117
Target Start/End: Complemental strand, 28572761 - 28572686
Alignment:
Q  42 tttgcaggaatttggatcaaccacaacataaaaccgacacaaaattacataaaatctcgcaaaatagacctataat 117  Q
    ||||| ||||||||||||||||  ||| ||||||||||| ||||||  |||||||||| |||||||||||||||||    
T  28572761 tttgcgggaatttggatcaaccgaaacctaaaaccgacataaaattgtataaaatctcacaaaatagacctataat 28572686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 43 - 117
Target Start/End: Original strand, 42556000 - 42556074
Alignment:
Q  43 ttgcaggaatttggatcaaccacaacataaaaccgacacaaaattacataaaatctcgcaaaatagacctataat 117  Q
    |||| ||||||||||||||||  ||  ||||||||||| ||||||  ||||||||||||||||||||||||||||    
T  42556000 ttgcgggaatttggatcaaccgaaatctaaaaccgacataaaattgtataaaatctcgcaaaatagacctataat 42556074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 48 - 117
Target Start/End: Original strand, 22658258 - 22658327
Alignment:
Q  48 ggaatttggatcaaccacaacataaaaccgacacaaaattacataaaatctcgcaaaatagacctataat 117  Q
    |||||| |||||||||  ||| ||||||||||| ||||||  ||||||||||||||||||||||||||||    
T  22658258 ggaattgggatcaaccgaaacctaaaaccgacataaaattgtataaaatctcgcaaaatagacctataat 22658327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 42 - 117
Target Start/End: Complemental strand, 2317315 - 2317240
Alignment:
Q  42 tttgcaggaatttggatcaaccacaacataaaaccgacacaaaattacataaaatctcgcaaaatagacctataat 117  Q
    ||||| ||||||||||||||||  ||  ||||||||||| ||||||  ||||||| ||||||||||||||||||||    
T  2317315 tttgcgggaatttggatcaaccgaaatctaaaaccgacataaaattgtataaaatatcgcaaaatagacctataat 2317240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 42 - 117
Target Start/End: Complemental strand, 4231473 - 4231398
Alignment:
Q  42 tttgcaggaatttggatcaaccacaacataaaaccgacacaaaattacataaaatctcgcaaaatagacctataat 117  Q
    ||||| ||||||||||||||||  ||| ||||| ||||| ||||||  ||||||||||| ||||||||||||||||    
T  4231473 tttgcgggaatttggatcaaccgaaacctaaaatcgacataaaattgtataaaatctcgtaaaatagacctataat 4231398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 42 - 117
Target Start/End: Complemental strand, 10092508 - 10092433
Alignment:
Q  42 tttgcaggaatttggatcaaccacaacataaaaccgacacaaaattacataaaatctcgcaaaatagacctataat 117  Q
    ||||| |||||||||||| |||| ||| ||||| ||||| ||||||  |||||||||||||||||||| |||||||    
T  10092508 tttgcgggaatttggatctaccaaaacctaaaatcgacataaaattgtataaaatctcgcaaaatagatctataat 10092433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 42 - 117
Target Start/End: Complemental strand, 41388259 - 41388184
Alignment:
Q  42 tttgcaggaatttggatcaaccacaacataaaaccgacacaaaattacataaaatctcgcaaaatagacctataat 117  Q
    ||||| |||||||| |||||||  ||| ||||||||||| ||||||  |||||||||| |||||||||||||||||    
T  41388259 tttgcgggaatttgaatcaaccgaaacctaaaaccgacataaaattgtataaaatctcacaaaatagacctataat 41388184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 42 - 117
Target Start/End: Original strand, 41837860 - 41837935
Alignment:
Q  42 tttgcaggaatttggatcaaccacaacataaaaccgacacaaaattacataaaatctcgcaaaatagacctataat 117  Q
    ||||| ||||||||||||||||| ||| ||||| ||||| ||||||  |||||||||| ||||||| |||||||||    
T  41837860 tttgcgggaatttggatcaaccaaaacctaaaatcgacataaaattgtataaaatctcccaaaataaacctataat 41837935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 40 - 136
Target Start/End: Complemental strand, 41169840 - 41169744
Alignment:
Q  40 actttgcaggaatttggatcaaccacaacataaaaccgacacaaaattacataaaatctcgcaaaatagacctataatcgttgattttctaactttt 136  Q
    |||||||  |||||| ||||||||  ||| |||||||||||||||||||  |||||| ||| ||||||||| ||||| | |||||||| ||| ||||    
T  41169840 actttgcgtgaatttagatcaacctaaacctaaaaccgacacaaaattatttaaaatatcgtaaaatagacgtataaactttgattttttaattttt 41169744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 42 - 117
Target Start/End: Complemental strand, 1098311 - 1098236
Alignment:
Q  42 tttgcaggaatttggatcaaccacaacataaaaccgacacaaaattacataaaatctcgcaaaatagacctataat 117  Q
    ||||||| ||||||||||||||  ||| |||||| |||| ||| ||  |||||||||| |||||||||||||||||    
T  1098311 tttgcagaaatttggatcaaccgaaacctaaaactgacataaatttgtataaaatctcacaaaatagacctataat 1098236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 42 - 117
Target Start/End: Complemental strand, 4698060 - 4697985
Alignment:
Q  42 tttgcaggaatttggatcaaccacaacataaaaccgacacaaaattacataaaatctcgcaaaatagacctataat 117  Q
    ||||| ||||||||||| ||||  ||  ||||||||||| ||||||  |||||||||||||||||||| |||||||    
T  4698060 tttgcgggaatttggataaaccgaaatctaaaaccgacataaaattgtataaaatctcgcaaaatagatctataat 4697985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 70 - 127
Target Start/End: Original strand, 32018022 - 32018079
Alignment:
Q  70 taaaaccgacacaaaattacataaaatctcgcaaaatagacctataatcgttgatttt 127  Q
    ||||| ||||||||||||  ||||||||||  |||||||||||||||||||| |||||    
T  32018022 taaaatcgacacaaaattgtataaaatctcttaaaatagacctataatcgttaatttt 32018079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 50 - 117
Target Start/End: Original strand, 3659736 - 3659803
Alignment:
Q  50 aatttggatcaaccacaacataaaaccgacacaaaattacataaaatctcgcaaaatagacctataat 117  Q
    ||||| ||||||||  ||| ||||||||| | ||||||  |||||||||||||||| |||||||||||    
T  3659736 aattttgatcaaccgaaacctaaaaccgatataaaattgtataaaatctcgcaaaacagacctataat 3659803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 40 - 127
Target Start/End: Complemental strand, 36108911 - 36108824
Alignment:
Q  40 actttgcaggaatttggatcaaccacaacataaaaccgacacaaaattacataaaatctcgcaaaatagacctataatcgttgatttt 127  Q
    ||||||| ||||||||||||| ||  ||| |||||||| ||||| |||  ||| ||||| |||||||||||||||  ||||| |||||    
T  36108911 actttgcgggaatttggatcagcccaaacctaaaaccgtcacaacattgtatagaatcttgcaaaatagacctatggtcgttaatttt 36108824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 48 - 117
Target Start/End: Complemental strand, 7413279 - 7413211
Alignment:
Q  48 ggaatttggatcaaccacaacataaaaccgacacaaaattacataaaatctcgcaaaatagacctataat 117  Q
    |||||||| |||||||  ||| ||||||||||| |||| |  ||||||||||| ||||||||||||||||    
T  7413279 ggaatttgaatcaaccgaaacctaaaaccgacataaaaatgtataaaatctcg-aaaatagacctataat 7413211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 203 - 268
Target Start/End: Complemental strand, 25629650 - 25629585
Alignment:
Q  203 atatgatacagtaccaatgtctatgataattaatattatgaatttaatcagaacaattatgacatt 268  Q
    ||||| || |||| ||| ||||||| ||||||||||||||| || ||| || ||||||||||||||    
T  25629650 atatggtaaagtaacaacgtctatggtaattaatattatgatttgaattaggacaattatgacatt 25629585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 133 - 182
Target Start/End: Complemental strand, 33979644 - 33979595
Alignment:
Q  133 tttttcgagtgggccgtggcccaccccatcccatgaagggctccgccact 182  Q
    ||||||||||||| ||| ||||| |||| | |||||||||||||||||||    
T  33979644 tttttcgagtgggtcgtagcccatcccagctcatgaagggctccgccact 33979595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 40 - 112
Target Start/End: Complemental strand, 17836570 - 17836498
Alignment:
Q  40 actttgcaggaatttggatcaaccacaacataaaaccgacacaaaattacataaaatctcgcaaaatagacct 112  Q
    ||||||||| || |||||||| ||  ||| ||||||||||||||||||  |||||||||  ||||||| ||||    
T  17836570 actttgcagaaacttggatcacccgaaacctaaaaccgacacaaaattgtataaaatcttacaaaatacacct 17836498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 110; Significance: 2e-55; HSPs: 46)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 37 - 182
Target Start/End: Complemental strand, 43358555 - 43358410
Alignment:
Q  37 actactttgcaggaatttggatcaaccacaacataaaaccgacacaaaattacataaaatctcgcaaaatagacctataatcgttgattttctaactttt 136  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| | | ||||    
T  43358555 actactttgcaggaatttggatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagacctataatcgttgattttttcattttt 43358456  T
Q  137 tcgagtgggccgtggcccaccccatcccatgaagggctccgccact 182  Q
     || ||||||||||||||||| || |||||||||||||||||||||    
T  43358455 ccgggtgggccgtggcccacctcagcccatgaagggctccgccact 43358410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 109; E-Value: 7e-55
Query Start/End: Original strand, 40 - 184
Target Start/End: Original strand, 9737722 - 9737866
Alignment:
Q  40 actttgcaggaatttggatcaaccacaacataaaaccgacacaaaattacataaaatctcgcaaaatagacctataatcgttgattttctaactttttcg 139  Q
    ||||||||||||||||||||||| | |||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||| ||| |||| ||    
T  9737722 actttgcaggaatttggatcaacaaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagacctataatcgttaattttttaatttttccg 9737821  T
Q  140 agtgggccgtggcccaccccatcccatgaagggctccgccactga 184  Q
     |||||||||||||||||||| |||||||||||||||||||||||    
T  9737822 ggtgggccgtggcccaccccagcccatgaagggctccgccactga 9737866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 40 - 183
Target Start/End: Complemental strand, 3631401 - 3631258
Alignment:
Q  40 actttgcaggaatttggatcaaccacaacataaaaccgacacaaaattacataaaatctcgcaaaatagacctataatcgttgattttctaactttttcg 139  Q
    ||||||||||||||||||||||| | ||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||| ||| |||| ||    
T  3631401 actttgcaggaatttggatcaactaaaacataaaaccaacacaaaattgcataaaatctcgcaaaatagacctataatcgttgattttttaatttttccg 3631302  T
Q  140 agtgggccgtggcccaccccatcccatgaagggctccgccactg 183  Q
     |||||||||||||||||||| ||||||||||||||||||||||    
T  3631301 ggtgggccgtggcccaccccagcccatgaagggctccgccactg 3631258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 40 - 183
Target Start/End: Original strand, 26525245 - 26525388
Alignment:
Q  40 actttgcaggaatttggatcaaccacaacataaaaccgacacaaaattacataaaatctcgcaaaatagacctataatcgttgattttctaactttttcg 139  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||| | | |||| ||    
T  26525245 actttgcaggaatttggatcaaccaaaacataaaaccgacacaaaattgcaaaaaatctcgcaaaatagacctataatcgttgatttttttatttttccg 26525344  T
Q  140 agtgggccgtggcccaccccatcccatgaagggctccgccactg 183  Q
     |||||||||||||||||||| ||||||||||||||||||||||    
T  26525345 ggtgggccgtggcccaccccagcccatgaagggctccgccactg 26525388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 40 - 180
Target Start/End: Complemental strand, 16823273 - 16823133
Alignment:
Q  40 actttgcaggaatttggatcaaccacaacataaaaccgacacaaaattacataaaatctcgcaaaatagacctataatcgttgattttctaactttttcg 139  Q
    ||||||||||||||| ||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||| |||| ||    
T  16823273 actttgcaggaatttagatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagacctataatcgttgattttttaatttttccg 16823174  T
Q  140 agtgggccgtggcccaccccatcccatgaagggctccgcca 180  Q
      ||||||||||||||||||| |||||||||||||||||||    
T  16823173 gatgggccgtggcccaccccagcccatgaagggctccgcca 16823133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 40 - 183
Target Start/End: Complemental strand, 30773021 - 30772878
Alignment:
Q  40 actttgcaggaatttggatcaaccacaacataaaaccgacacaaaattacataaaatctcgcaaaatagacctataatcgttgattttctaactttttcg 139  Q
    |||||||||||||||| |||||||| ||||||||||||| |||||||| |||||||||| |||||||||||||||||||||||||||| ||| |||||||    
T  30773021 actttgcaggaatttgaatcaaccaaaacataaaaccgatacaaaattgcataaaatcttgcaaaatagacctataatcgttgattttttaattttttcg 30772922  T
Q  140 agtgggccgtggcccaccccatcccatgaagggctccgccactg 183  Q
     ||| |||||||||||||||| ||||||||||||||||||||||    
T  30772921 ggtgagccgtggcccaccccaacccatgaagggctccgccactg 30772878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 37 - 183
Target Start/End: Original strand, 8074251 - 8074398
Alignment:
Q  37 actactttgcaggaatttggatcaaccacaacataaaaccgacacaaaattacataaaatctcgcaaaatagacctataatcgttgattttctaactttt 136  Q
    |||||||||| ||||||||||||||||| ||| ||||||||||||||||||  |||||||||||||||||||||||||||||||||||||| |||  |||    
T  8074251 actactttgcgggaatttggatcaaccaaaacctaaaaccgacacaaaattgtataaaatctcgcaaaatagacctataatcgttgattttttaaaattt 8074350  T
Q  137 tcga-gtgggccgtggcccaccccatcccatgaagggctccgccactg 183  Q
    || | |||||||||||||||||||| ||||||||||||||||||||||    
T  8074351 tccaggtgggccgtggcccaccccagcccatgaagggctccgccactg 8074398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 40 - 183
Target Start/End: Original strand, 25701436 - 25701579
Alignment:
Q  40 actttgcaggaatttggatcaaccacaacataaaaccgacacaaaattacataaaatctcgcaaaatagacctataatcgttgattttctaactttttcg 139  Q
    ||||||||||||||| ||||||||| ||||||||||||| ||||||||||||||||||| |||||||||| ||||||||||||||||| ||| |||| ||    
T  25701436 actttgcaggaatttagatcaaccaaaacataaaaccgatacaaaattacataaaatcttgcaaaatagatctataatcgttgattttttaatttttccg 25701535  T
Q  140 agtgggccgtggcccaccccatcccatgaagggctccgccactg 183  Q
      ||||||||||||||||||| ||||||||||||||||||||||    
T  25701536 gatgggccgtggcccaccccagcccatgaagggctccgccactg 25701579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 40 - 181
Target Start/End: Complemental strand, 43348776 - 43348635
Alignment:
Q  40 actttgcaggaatttggatcaaccacaacataaaaccgacacaaaattacataaaatctcgcaaaatagacctataatcgttgattttctaactttttcg 139  Q
    ||||||||||||||||||||||||| ||||||||||| |||||||||| ||||||||||||||||||| ||||||||||||| ||||| ||| |||| ||    
T  43348776 actttgcaggaatttggatcaaccaaaacataaaaccaacacaaaattgcataaaatctcgcaaaataaacctataatcgttaattttttaatttttccg 43348677  T
Q  140 agtgggccgtggcccaccccatcccatgaagggctccgccac 181  Q
     |||||||||||||| ||||| ||||||||||||||||||||    
T  43348676 ggtgggccgtggcccgccccagcccatgaagggctccgccac 43348635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 40 - 186
Target Start/End: Original strand, 7440496 - 7440641
Alignment:
Q  40 actttgcaggaatttggatcaaccacaacataaaaccgacacaaaattacataaaatctcgcaaaatagacctataatcgttgattttctaactttttcg 139  Q
    ||||||||||||||||||||||||| ||||||||||| |||||||||| ||||||||||||||||||||| ||||||||||||||||| ||| |||| |     
T  7440496 actttgcaggaatttggatcaaccaaaacataaaaccaacacaaaattgcataaaatctcgcaaaatagatctataatcgttgattttttaatttttcca 7440595  T
Q  140 agtgggccgtggcccaccccatcccatgaagggctccgccactgatg 186  Q
     ||||||||| ||||| |||| |||||||||||||||||||||||||    
T  7440596 ggtgggccgtagccca-cccaacccatgaagggctccgccactgatg 7440641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 40 - 178
Target Start/End: Complemental strand, 29390411 - 29390273
Alignment:
Q  40 actttgcaggaatttggatcaaccacaacataaaaccgacacaaaattacataaaatctcgcaaaatagacctataatcgttgattttctaactttttcg 139  Q
    ||||||||||||||||||||||||| ||||||||||| |||||||||| |||||||||||| |||||| ||||||||||||||||||| ||| |||| |     
T  29390411 actttgcaggaatttggatcaaccaaaacataaaaccaacacaaaattgcataaaatctcgtaaaatacacctataatcgttgattttttaatttttcca 29390312  T
Q  140 agtgggccgtggcccaccccatcccatgaagggctccgc 178  Q
     |||||||||||||||||||| |||||||||||||||||    
T  29390311 ggtgggccgtggcccaccccagcccatgaagggctccgc 29390273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 50 - 183
Target Start/End: Original strand, 13013280 - 13013413
Alignment:
Q  50 aatttggatcaaccacaacataaaaccgacacaaaattacataaaatctcgcaaaatagacctataatcgttgattttctaactttttcgagtgggccgt 149  Q
    ||||||||||||||| |||||||||| || |||||||| | |||||||||||||| |||||||||||||||||||||| ||| |||| || |||||||||    
T  13013280 aatttggatcaaccaaaacataaaactgatacaaaattgcttaaaatctcgcaaattagacctataatcgttgattttttaatttttccgggtgggccgt 13013379  T
Q  150 ggcccaccccatcccatgaagggctccgccactg 183  Q
    ||||||||||| ||||||||||||||||||||||    
T  13013380 ggcccaccccagcccatgaagggctccgccactg 13013413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 40 - 161
Target Start/End: Complemental strand, 15374257 - 15374136
Alignment:
Q  40 actttgcaggaatttggatcaaccacaacataaaaccgacacaaaattacataaaatctcgcaaaatagacctataatcgttgattttctaactttttcg 139  Q
    |||||||| |||||| ||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||| |||| ||    
T  15374257 actttgcaagaatttcgatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagacctataatcgttgattttttaatttttccg 15374158  T
Q  140 agtgggccgtggcccaccccat 161  Q
     |||||||||||||||||||||    
T  15374157 ggtgggccgtggcccaccccat 15374136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 40 - 185
Target Start/End: Original strand, 26297024 - 26297169
Alignment:
Q  40 actttgcaggaatttggatcaaccacaacataaaaccgacacaaaattacataaaatctcgcaaaatagacctataatcgttgattttctaactttttcg 139  Q
    ||||||| ||||||||||||||||| ||| ||||||||||||||||||| |||| |||| |||||||||||||||||| ||||||||| ||| |||||||    
T  26297024 actttgcgggaatttggatcaaccaaaacctaaaaccgacacaaaattatataagatcttgcaaaatagacctataattgttgattttttaattttttcg 26297123  T
Q  140 agtgggccgtggcccaccccatcccatgaagggctccgccactgat 185  Q
     |||| |||||||||| |||| | ||||||||||||||||||||||    
T  26297124 ggtggaccgtggcccatcccagctcatgaagggctccgccactgat 26297169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 40 - 179
Target Start/End: Original strand, 9596181 - 9596320
Alignment:
Q  40 actttgcaggaatttggatcaaccacaacataaaaccgacacaaaattacataaaatctcgcaaaatagacctataatcgttgattttctaactttttcg 139  Q
    ||||||||| ||||||||||||| | || ||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||| ||| ||||| |    
T  9596181 actttgcagaaatttggatcaactaaaatataaaaccgacacaaaattgcataaaatctcgcaaaatagacatataatcgttgattttttaatttttttg 9596280  T
Q  140 agtgggccgtggcccaccccatcccatgaagggctccgcc 179  Q
     |||||||||||||||||||| ||  ||||||||||||||    
T  9596281 ggtgggccgtggcccaccccagcctttgaagggctccgcc 9596320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 40 - 189
Target Start/End: Complemental strand, 20487114 - 20486965
Alignment:
Q  40 actttgcaggaatttggatcaaccacaacataaaaccgacacaaaattacataaaatctcgcaaaatagacctataatcgttgattttctaactttttcg 139  Q
    ||||||||||||||||||||| ||  ||| ||||||||||||||||||  ||||||||| |||||||| |||||| |||||| ||||| ||| |||||||    
T  20487114 actttgcaggaatttggatcagccgaaacctaaaaccgacacaaaattgtataaaatcttgcaaaatatacctatgatcgttaattttttaattttttcg 20487015  T
Q  140 agtgggccgtggcccaccccatcccatgaagggctccgccactgatgtca 189  Q
    |||||||||||||||| |  | |||||||||||||| |||||| ||||||    
T  20487014 agtgggccgtggcccagcttagcccatgaagggctctgccacttatgtca 20486965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 183 - 268
Target Start/End: Original strand, 29379932 - 29380017
Alignment:
Q  183 gatgtcatggacataatatgatatgatacagtaccaatgtctatgataattaatattatgaatttaatcagaacaattatgacatt 268  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  29379932 gatgtcatggacataatatgatatggtacagtaccaatgtctatgataattaatattatgaatttaattagaacaattatgacatt 29380017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 40 - 184
Target Start/End: Original strand, 41084597 - 41084739
Alignment:
Q  40 actttgcaggaatttggatcaaccacaacataaaaccgacacaaaattacataaaatctcgcaaaatagacctataatcgttgattttctaactttttcg 139  Q
    ||||||| | |||||||||||| || ||| ||||| ||||||||||||  |||||||||||||||||||||||||||||||||||||| ||| |||| ||    
T  41084597 actttgcggaaatttggatcaatcaaaacctaaaatcgacacaaaattctataaaatctcgcaaaatagacctataatcgttgattttttaatttttccg 41084696  T
Q  140 agtgggccgtggcccaccccatcccatgaagggctccgccactga 184  Q
     |||| ||  ||||||||||| |||||||||||||||||||||||    
T  41084697 ggtggacc--ggcccaccccagcccatgaagggctccgccactga 41084739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 50 - 183
Target Start/End: Complemental strand, 5844238 - 5844105
Alignment:
Q  50 aatttggatcaaccacaacataaaaccgacacaaaattacataaaatctcgcaaaatagacctataatcgttgattttctaactttttcgagtgggccgt 149  Q
    ||||||||||||||| ||||||||| |||||| ||||| |||||||||| | |||||||||||||||||||||||||| ||| |||| ||  || |||||    
T  5844238 aatttggatcaaccaaaacataaaatcgacaccaaattgcataaaatctagtaaaatagacctataatcgttgattttttaatttttccggatgtgccgt 5844139  T
Q  150 ggcccaccccatcccatgaagggctccgccactg 183  Q
     |||||||||| ||||| ||||||||||||||||    
T  5844138 agcccaccccaacccattaagggctccgccactg 5844105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 50 - 183
Target Start/End: Original strand, 20656883 - 20657016
Alignment:
Q  50 aatttggatcaaccacaacataaaaccgacacaaaattacataaaatctcgcaaaatagacctataatcgttgattttctaactttttcgagtgggccgt 149  Q
    ||||||||||||||| ||||||||||||| |||||||| |||||||||||| ||| |||||||||||| ||||||||| ||| |||||||  | |||| |    
T  20656883 aatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatctcgtaaattagacctataattgttgattttttaattttttcggataggccat 20656982  T
Q  150 ggcccaccccatcccatgaagggctccgccactg 183  Q
    ||||||||||| || ||||| |||||||||||||    
T  20656983 ggcccaccccagcctatgaaaggctccgccactg 20657016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 40 - 136
Target Start/End: Original strand, 32304668 - 32304764
Alignment:
Q  40 actttgcaggaatttggatcaaccacaacataaaaccgacacaaaattacataaaatctcgcaaaatagacctataatcgttgattttctaactttt 136  Q
    ||||||||||||||||||||||||| || ||||||||||||||||||| |||||||||||| ||||||||| |||||||||||||||| ||| ||||    
T  32304668 actttgcaggaatttggatcaaccaaaatataaaaccgacacaaaattgcataaaatctcgtaaaatagacttataatcgttgattttttaattttt 32304764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 40 - 146
Target Start/End: Complemental strand, 10925651 - 10925545
Alignment:
Q  40 actttgcaggaatttggatcaaccacaacataaaaccgacacaaaattacataaaatctcgcaaaatagacctataatcgttgattttctaactttttcg 139  Q
    |||||| ||||||||| |||||| | ||||||||||||| ||||||||||||||||||||||||| ||||| |||||||||||||||| ||| |||| ||    
T  10925651 actttgtaggaatttgaatcaactaaaacataaaaccgatacaaaattacataaaatctcgcaaattagacatataatcgttgattttttaatttttccg 10925552  T
Q  140 agtgggc 146  Q
    |||||||    
T  10925551 agtgggc 10925545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 40 - 183
Target Start/End: Original strand, 19577196 - 19577338
Alignment:
Q  40 actttgcaggaatttggatcaaccacaacataaaaccgacacaaaattacataaaatctcgcaaaatagacctataatcgttgattttctaactttttcg 139  Q
    ||||||| ||||||||||||||||| ||  || |||||||||||||||  ||||||| | |||||||||| ||||||||||| ||||| | | |||| ||    
T  19577196 actttgcgggaatttggatcaaccaaaatctagaaccgacacaaaattgtataaaatgttgcaaaatagatctataatcgttaatttt-ttatttttccg 19577294  T
Q  140 agtgggccgtggcccaccccatcccatgaagggctccgccactg 183  Q
     |||||||||||||||||  | ||||||||||||||||||||||    
T  19577295 ggtgggccgtggcccaccttagcccatgaagggctccgccactg 19577338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 50 - 136
Target Start/End: Original strand, 13084668 - 13084754
Alignment:
Q  50 aatttggatcaaccacaacataaaaccgacacaaaattacataaaatctcgcaaaatagacctataatcgttgattttctaactttt 136  Q
    ||||||||||||||| ||||||||| ||| |||||||| |||||||||||||||| |||||||||||||||||||||| ||| ||||    
T  13084668 aatttggatcaaccaaaacataaaatcgatacaaaattgcataaaatctcgcaaattagacctataatcgttgattttttaattttt 13084754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 42 - 115
Target Start/End: Original strand, 7440385 - 7440458
Alignment:
Q  42 tttgcaggaatttggatcaaccacaacataaaaccgacacaaaattacataaaatctcgcaaaatagacctata 115  Q
    ||||||||||||||||||||||| ||| ||||||||||| ||||||  ||||||||||||||||||||||||||    
T  7440385 tttgcaggaatttggatcaaccaaaacctaaaaccgacataaaattgtataaaatctcgcaaaatagacctata 7440458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 70 - 184
Target Start/End: Original strand, 20071259 - 20071372
Alignment:
Q  70 taaaaccgacacaaaattacataaaatctcgcaaaatagacctataatcgttgattttctaactttttcgagtgggccgtggcccaccccatcccatgaa 169  Q
    ||||||||||| ||||||  |||||||||| ||||||| | || |||||||| ||||| ||| |||| ||||||||||||| ||||||| | ||||||||    
T  20071259 taaaaccgacataaaattgtataaaatctcacaaaataaatctttaatcgttaatttt-taatttttccgagtgggccgtgacccaccctagcccatgaa 20071357  T
Q  170 gggctccgccactga 184  Q
    |||||||||| ||||    
T  20071358 gggctccgcctctga 20071372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 78 - 182
Target Start/End: Complemental strand, 28662221 - 28662117
Alignment:
Q  78 acacaaaattacataaaatctcgcaaaatagacctataatcgttgattttctaactttttcgagtgggccgtggcccaccccatcccatgaagggctccg 177  Q
    ||||||||||  ||||||||||| |||||||| ||||  | ||| ||||| ||| |||| || |||||||||||||||||||| ||||| ||||||||||    
T  28662221 acacaaaattgtataaaatctcgtaaaatagatctatggtggttaattttttaatttttccgggtgggccgtggcccaccccagcccataaagggctccg 28662122  T
Q  178 ccact 182  Q
    |||||    
T  28662121 ccact 28662117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 42 - 117
Target Start/End: Complemental strand, 3631512 - 3631437
Alignment:
Q  42 tttgcaggaatttggatcaaccacaacataaaaccgacacaaaattacataaaatctcgcaaaatagacctataat 117  Q
    ||||| ||||||||||||||||| ||| ||||| ||||| ||||||  ||||||||||||||||||||||||||||    
T  3631512 tttgcgggaatttggatcaaccaaaacttaaaatcgacataaaattgtataaaatctcgcaaaatagacctataat 3631437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 40 - 179
Target Start/End: Original strand, 37042569 - 37042708
Alignment:
Q  40 actttgcaggaatttggatcaaccacaacataaaaccgacacaaaattacataaaatctcgcaaaatagacctataatcgttgattttctaactttttcg 139  Q
    ||||||| |||||||| |||||||  ||  ||||||||| | ||||||  |||||||||||||||||||| |||| ||| |  ||||| ||| |||||||    
T  37042569 actttgcgggaatttgaatcaaccgaaatctaaaaccgatataaaattgtataaaatctcgcaaaatagatctatgatcatcaattttttaattttttcg 37042668  T
Q  140 agtgggccgtggcccaccccatcccatgaagggctccgcc 179  Q
     |||||| ||||| ||||| |  |||||||||||||||||    
T  37042669 ggtgggctgtggctcaccctaaaccatgaagggctccgcc 37042708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 48 - 117
Target Start/End: Original strand, 32304563 - 32304632
Alignment:
Q  48 ggaatttggatcaaccacaacataaaaccgacacaaaattacataaaatctcgcaaaatagacctataat 117  Q
    ||||||||||||||||  ||| ||||||||||| ||||||  ||||||||||||||||||||||||||||    
T  32304563 ggaatttggatcaaccgaaacctaaaaccgacataaaattgtataaaatctcgcaaaatagacctataat 32304632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 48 - 184
Target Start/End: Original strand, 22578958 - 22579094
Alignment:
Q  48 ggaatttggatcaaccacaacataaaaccgacacaaaattacataaaatctcgcaaaatagacctataatcgttgattttctaactttttcgagtgggcc 147  Q
    ||||||||||||| ||  ||| ||||||||||||||||||  | ||||||||| |||||| || ||| |||||| ||||| ||  ||| ||| ||| | |    
T  22578958 ggaatttggatcagccgaaacctaaaaccgacacaaaattgtacaaaatctcgtaaaataaacttatgatcgttaattttatagttttctcgggtgagtc 22579057  T
Q  148 gtggcccaccccatcccatgaagggctccgccactga 184  Q
    ||||||||||| | ||||||||||| |||||| ||||    
T  22579058 gtggcccaccctagcccatgaagggatccgcctctga 22579094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 42 - 117
Target Start/End: Complemental strand, 16823384 - 16823309
Alignment:
Q  42 tttgcaggaatttggatcaaccacaacataaaaccgacacaaaattacataaaatctcgcaaaatagacctataat 117  Q
    ||||| ||||||||||||||||  ||| ||||||||||| ||||| | |||||||||||||||||||| |||||||    
T  16823384 tttgcgggaatttggatcaaccgaaacctaaaaccgacataaaatcatataaaatctcgcaaaatagatctataat 16823309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 42 - 117
Target Start/End: Complemental strand, 43348887 - 43348812
Alignment:
Q  42 tttgcaggaatttggatcaaccacaacataaaaccgacacaaaattacataaaatctcgcaaaatagacctataat 117  Q
    ||||| ||||||||||||||||  ||| ||||||||||| |||||   ||||||||||||||||||||||||||||    
T  43348887 tttgcgggaatttggatcaaccgaaacctaaaaccgacataaaatcgtataaaatctcgcaaaatagacctataat 43348812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 42 - 117
Target Start/End: Original strand, 26525134 - 26525209
Alignment:
Q  42 tttgcaggaatttggatcaaccacaacataaaaccgacacaaaattacataaaatctcgcaaaatagacctataat 117  Q
    ||||| |||||||||||||||   ||| | ||||||||| ||||||  ||||||||||||||||||||||||||||    
T  26525134 tttgcgggaatttggatcaactgaaaccttaaaccgacataaaattgtataaaatctcgcaaaatagacctataat 26525209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 42 - 117
Target Start/End: Complemental strand, 30773132 - 30773057
Alignment:
Q  42 tttgcaggaatttggatcaaccacaacataaaaccgacacaaaattacataaaatctcgcaaaatagacctataat 117  Q
    ||||| ||||||||||||||||  ||| ||||| ||||| ||||||  |||||||||||||||||||| |||||||    
T  30773132 tttgcgggaatttggatcaaccgaaacctaaaatcgacataaaattgtataaaatctcgcaaaatagatctataat 30773057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 42 - 117
Target Start/End: Complemental strand, 43358663 - 43358588
Alignment:
Q  42 tttgcaggaatttggatcaaccacaacataaaaccgacacaaaattacataaaatctcgcaaaatagacctataat 117  Q
    ||||| ||||||||||||||||  ||| |||||| |||| ||||||  |||||||||||||||||| |||||||||    
T  43358663 tttgcgggaatttggatcaaccgtaacctaaaacagacataaaattgtataaaatctcgcaaaataaacctataat 43358588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 48 - 117
Target Start/End: Original strand, 25701332 - 25701400
Alignment:
Q  48 ggaatttggatcaaccacaacataaaaccgacacaaaattacataaaatctcgcaaaatagacctataat 117  Q
    ||||||||||||||||  ||| ||||||||||| ||| ||  ||||||||||||||||||||||||||||    
T  25701332 ggaatttggatcaaccgaaacctaaaaccgacataaa-ttgtataaaatctcgcaaaatagacctataat 25701400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 42 - 115
Target Start/End: Complemental strand, 26785083 - 26785010
Alignment:
Q  42 tttgcaggaatttggatcaaccacaacataaaaccgacacaaaattacataaaatctcgcaaaatagacctata 115  Q
    ||||| |||||||||||||||   ||| ||||||||||| ||||||  |||||||||| |||||||||||||||    
T  26785083 tttgcgggaatttggatcaactgaaacctaaaaccgacataaaattgtataaaatctcacaaaatagacctata 26785010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 42 - 117
Target Start/End: Original strand, 9596070 - 9596145
Alignment:
Q  42 tttgcaggaatttggatcaaccacaacataaaaccgacacaaaattacataaaatctcgcaaaatagacctataat 117  Q
    |||||||||||||| ||||||   ||| ||||||||||| ||||||  |||||||||| ||||||||| |||||||    
T  9596070 tttgcaggaatttgaatcaacacaaacctaaaaccgacataaaattgtataaaatctcacaaaatagatctataat 9596145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 40 - 127
Target Start/End: Complemental strand, 41817595 - 41817508
Alignment:
Q  40 actttgcaggaatttggatcaaccacaacataaaaccgacacaaaattacataaaatctcgcaaaatagacctataatcgttgatttt 127  Q
    ||||||||| ||||||||||||||| ||  |||||| ||||| |||||  ||||||| ||||||| ||||| ||| |||||| |||||    
T  41817595 actttgcagaaatttggatcaaccaaaatctaaaactgacactaaattgtataaaatatcgcaaagtagacatatgatcgttaatttt 41817508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 40 - 109
Target Start/End: Original strand, 8074141 - 8074210
Alignment:
Q  40 actttgcaggaatttggatcaaccacaacataaaaccgacacaaaattacataaaatctcgcaaaataga 109  Q
    ||||||| |||||||| |||||||  ||| |||||||||||  |||||  ||||||||||||||||||||    
T  8074141 actttgcgggaatttgaatcaaccgaaacctaaaaccgacattaaattgtataaaatctcgcaaaataga 8074210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 50 - 117
Target Start/End: Complemental strand, 10925754 - 10925687
Alignment:
Q  50 aatttggatcaaccacaacataaaaccgacacaaaattacataaaatctcgcaaaatagacctataat 117  Q
    ||||||||||||||  ||| ||||||||||| ||| ||  |||||||||| ||||||||| |||||||    
T  10925754 aatttggatcaaccgaaacctaaaaccgacataaatttgtataaaatctcacaaaatagatctataat 10925687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 50 - 117
Target Start/End: Original strand, 13013167 - 13013234
Alignment:
Q  50 aatttggatcaaccacaacataaaaccgacacaaaattacataaaatctcgcaaaatagacctataat 117  Q
    ||||||||||||||   || ||||||||||| ||| ||  |||||||||| |||||||||||||||||    
T  13013167 aatttggatcaaccgatacctaaaaccgacataaatttgtataaaatctcacaaaatagacctataat 13013234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 124 - 183
Target Start/End: Complemental strand, 26784970 - 26784911
Alignment:
Q  124 ttttctaactttttcgagtgggccgtggcccaccccatcccatgaagggctccgccactg 183  Q
    |||| ||| |||| || |||||||||||||||||  | ||||||||||||||||||||||    
T  26784970 ttttttaatttttccgggtgggccgtggcccacctaagcccatgaagggctccgccactg 26784911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 77 - 127
Target Start/End: Original strand, 30050144 - 30050194
Alignment:
Q  77 gacacaaaattacataaaatctcgcaaaatagacctataatcgttgatttt 127  Q
    |||||||||||  ||||||| ||| |||||||||||||||||||| |||||    
T  30050144 gacacaaaattgtataaaatatcgtaaaatagacctataatcgttaatttt 30050194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 40 - 117
Target Start/End: Original strand, 41084484 - 41084560
Alignment:
Q  40 actttgcaggaatttggatcaaccacaacataaaaccgacacaaaattacataaaatctcgcaaaatagacctataat 117  Q
    ||||||| |||||||| || ||||  ||| ||||||||||| |||| |  ||||||||||| ||||||||||||||||    
T  41084484 actttgcgggaatttgaattaaccgaaacctaaaaccgacataaaaatgtataaaatctcg-aaaatagacctataat 41084560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 110; Significance: 2e-55; HSPs: 55)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 40 - 181
Target Start/End: Complemental strand, 34983418 - 34983277
Alignment:
Q  40 actttgcaggaatttggatcaaccacaacataaaaccgacacaaaattacataaaatctcgcaaaatagacctataatcgttgattttctaactttttcg 139  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||  || |||| ||    
T  34983418 actttgcaggaatttggatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagacctataatcgttgatttttcaatttttccg 34983319  T
Q  140 agtgggccgtggcccaccccatcccatgaagggctccgccac 181  Q
     |||||||||||||||||||| ||||||||||||||||||||    
T  34983318 ggtgggccgtggcccaccccagcccatgaagggctccgccac 34983277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 37 - 183
Target Start/End: Complemental strand, 23869808 - 23869662
Alignment:
Q  37 actactttgcaggaatttggatcaaccacaacataaaaccgacacaaaattacataaaatctcgcaaaatagacctataatcgttgattttctaactttt 136  Q
    ||||||||||| |||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||| ||||    
T  23869808 actactttgcaagaatttggatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagacctataatcgttgattttttaattttt 23869709  T
Q  137 tcgagtgggccgtggcccaccccatcccatgaagggctccgccactg 183  Q
      | |||||||||||||||||||| |||||| |||||||||||||||    
T  23869708 cggggtgggccgtggcccaccccagcccatggagggctccgccactg 23869662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 40 - 183
Target Start/End: Complemental strand, 2249723 - 2249580
Alignment:
Q  40 actttgcaggaatttggatcaaccacaacataaaaccgacacaaaattacataaaatctcgcaaaatagacctataatcgttgattttctaactttttcg 139  Q
    ||||||||||||||| ||||||||| |||||||||||||||||||||| ||||||||||||||||||||| |||||||| |||||||| ||| |||||||    
T  2249723 actttgcaggaatttagatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagatctataatcattgattttttaattttttcg 2249624  T
Q  140 agtgggccgtggcccaccccatcccatgaagggctccgccactg 183  Q
     ||||| |||||||||||||| ||||||||||||||||||||||    
T  2249623 ggtgggtcgtggcccaccccagcccatgaagggctccgccactg 2249580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 40 - 183
Target Start/End: Complemental strand, 38763856 - 38763713
Alignment:
Q  40 actttgcaggaatttggatcaaccacaacataaaaccgacacaaaattacataaaatctcgcaaaatagacctataatcgttgattttctaactttttcg 139  Q
    ||||||||||||||||||||||||| ||||||||||| |||||||||| ||||||||||||| ||||||||||||||||||||||||| ||| |||| ||    
T  38763856 actttgcaggaatttggatcaaccaaaacataaaaccaacacaaaattgcataaaatctcgctaaatagacctataatcgttgattttttaatttttccg 38763757  T
Q  140 agtgggccgtggcccaccccatcccatgaagggctccgccactg 183  Q
     ||||||||||||||||| || ||||||||||||||||||||||    
T  38763756 ggtgggccgtggcccacctcagcccatgaagggctccgccactg 38763713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 40 - 184
Target Start/End: Complemental strand, 38527316 - 38527172
Alignment:
Q  40 actttgcaggaatttggatcaaccacaacataaaaccgacacaaaattacataaaatctcgcaaaatagacctataatcgttgattttctaactttttcg 139  Q
    |||||||||||||||||||||||||  |||||||||||| |||||||| ||||||||||| ||||||||||||||||||||||||||| | | |||| ||    
T  38527316 actttgcaggaatttggatcaaccaagacataaaaccgatacaaaattgcataaaatctcacaaaatagacctataatcgttgatttttttatttttccg 38527217  T
Q  140 agtgggccgtggcccaccccatcccatgaagggctccgccactga 184  Q
     |||||||||||||||||||| |||||||||||||||||||||||    
T  38527216 ggtgggccgtggcccaccccagcccatgaagggctccgccactga 38527172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 42 - 185
Target Start/End: Original strand, 13615981 - 13616124
Alignment:
Q  42 tttgcaggaatttggatcaaccacaacataaaaccgacacaaaattacataaaatctcgcaaaatagacctataatcgttgattttctaactttttcgag 141  Q
    ||||||||||||||||||||||| ||||||||| | |||||||||| ||||||||||||||||||||||||||||||||||||||| ||| |||| || |    
T  13615981 tttgcaggaatttggatcaaccaaaacataaaaacaacacaaaattgcataaaatctcgcaaaatagacctataatcgttgattttttaatttttccggg 13616080  T
Q  142 tgggccgtggcccaccccatcccatgaagggctccgccactgat 185  Q
    ||||||||||||||||||| |||||||| | |||||||||||||    
T  13616081 tgggccgtggcccaccccagcccatgaaagactccgccactgat 13616124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 40 - 183
Target Start/End: Original strand, 36436198 - 36436341
Alignment:
Q  40 actttgcaggaatttggatcaaccacaacataaaaccgacacaaaattacataaaatctcgcaaaatagacctataatcgttgattttctaactttttcg 139  Q
    |||||||||||||||||||||| || |||||||||||||||||||||| |||||||| ||||||||||||| |||||||||| ||||| ||| ||||| |    
T  36436198 actttgcaggaatttggatcaagcaaaacataaaaccgacacaaaattgcataaaatatcgcaaaatagacttataatcgttaattttttaatttttttg 36436297  T
Q  140 agtgggccgtggcccaccccatcccatgaagggctccgccactg 183  Q
     |||||||||||||||||||| ||||||||||||||||||||||    
T  36436298 ggtgggccgtggcccaccccagcccatgaagggctccgccactg 36436341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 40 - 183
Target Start/End: Original strand, 1115054 - 1115197
Alignment:
Q  40 actttgcaggaatttggatcaaccacaacataaaaccgacacaaaattacataaaatctcgcaaaatagacctataatcgttgattttctaactttttcg 139  Q
    ||||||||| ||||||||||||||| | ||||||||||||||||||||  ||||||||||||||||||||||||||||  |||||||| ||| |||| ||    
T  1115054 actttgcagaaatttggatcaaccaaatcataaaaccgacacaaaattgtataaaatctcgcaaaatagacctataataattgattttttaatttttccg 1115153  T
Q  140 agtgggccgtggcccaccccatcccatgaagggctccgccactg 183  Q
    ||||| ||||||||||||||| ||||||||||||||||||||||    
T  1115154 agtggaccgtggcccaccccagcccatgaagggctccgccactg 1115197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 42 - 183
Target Start/End: Original strand, 22674758 - 22674899
Alignment:
Q  42 tttgcaggaatttggatcaaccacaacataaaaccgacacaaaattacataaaatctcgcaaaatagacctataatcgttgattttctaactttttcgag 141  Q
    ||||| ||||||||||||| ||  ||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||| |||| || |    
T  22674758 tttgcgggaatttggatcagccgaaacctaaaaccgacacaaaattgcataaaatctcgcaaaatagacctataatcgttgattttttaatttttccggg 22674857  T
Q  142 tgggccgtggcccaccccatcccatgaagggctccgccactg 183  Q
    |||||||||| |||||||| ||||||||||||||||||||||    
T  22674858 tgggccgtggtccaccccagcccatgaagggctccgccactg 22674899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 40 - 185
Target Start/End: Original strand, 44545745 - 44545890
Alignment:
Q  40 actttgcaggaatttggatcaaccacaacataaaaccgacacaaaattacataaaatctcgcaaaatagacctataatcgttgattttctaactttttcg 139  Q
    |||||||| |||||||||||||||| || |||||||||||||||||||  ||||||| |||||||||||||||||||||||||||||| | | |||| ||    
T  44545745 actttgcaagaatttggatcaaccaaaatataaaaccgacacaaaattgtataaaatatcgcaaaatagacctataatcgttgatttttttatttttccg 44545844  T
Q  140 agtgggccgtggcccaccccatcccatgaagggctccgccactgat 185  Q
     |||| ||||||||||||||| ||||||||||||||||||||||||    
T  44545845 ggtggaccgtggcccaccccaacccatgaagggctccgccactgat 44545890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 40 - 183
Target Start/End: Original strand, 1021084 - 1021229
Alignment:
Q  40 actttgcaggaatttggatcaaccacaacataaaaccgacacaaaattacataaaatctcgcaaaatagacctataatcgttgattttctaactttt-tc 138  Q
    ||||||||||||||||||||||||| | ||||||||||||||||||||  ||||||||||||||||||||||||||||  |||||||| ||| |||| ||    
T  1021084 actttgcaggaatttggatcaaccaaatcataaaaccgacacaaaattgtataaaatctcgcaaaatagacctataataattgattttttaatttttctc 1021183  T
Q  139 gagt-gggccgtggcccaccccatcccatgaagggctccgccactg 183  Q
    | || |||||||||||||||||| ||||||||||||||||||||||    
T  1021184 gggtggggccgtggcccaccccagcccatgaagggctccgccactg 1021229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 40 - 184
Target Start/End: Original strand, 6750022 - 6750166
Alignment:
Q  40 actttgcaggaatttggatcaaccacaacataaaaccgacacaaaattacataaaatctcgcaaaatagacctataatcgttgattttctaactttttcg 139  Q
    ||||||||| |||||||||||| || ||||||||||| |||||||||| |||||||||||   |||||||||||||||||||||||||  || |||| ||    
T  6750022 actttgcagaaatttggatcaatcaaaacataaaaccaacacaaaattgcataaaatctcaataaatagacctataatcgttgatttttaaatttttccg 6750121  T
Q  140 agtgggccgtggcccaccccatcccatgaagggctccgccactga 184  Q
     |||||||||||||||||||| |||||||||||||||||||||||    
T  6750122 ggtgggccgtggcccaccccagcccatgaagggctccgccactga 6750166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 40 - 183
Target Start/End: Original strand, 28745509 - 28745653
Alignment:
Q  40 actttgcaggaatttggatcaaccacaacataaaaccgacacaaaattacataaaatctcgcaaaatagacctataatcgttgattttctaactttttc- 138  Q
    ||||||||||||||||||| ||||| ||||||||| |||||||||||| ||||||||||||||||||||||||||||||||| ||||| ||| |||  |     
T  28745509 actttgcaggaatttggat-aaccaaaacataaaatcgacacaaaattgcataaaatctcgcaaaatagacctataatcgttaattttttaattttcccg 28745607  T
Q  139 -gagtgggccgtggcccaccccatcccatgaagggctccgccactg 183  Q
     | |||||||||||||||||||| ||||||||||||||||||||||    
T  28745608 ggggtgggccgtggcccaccccagcccatgaagggctccgccactg 28745653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 40 - 183
Target Start/End: Complemental strand, 7366293 - 7366150
Alignment:
Q  40 actttgcaggaatttggatcaaccacaacataaaaccgacacaaaattacataaaatctcgcaaaatagacctataatcgttgattttctaactttttcg 139  Q
    |||||||||||||||||||||| || ||||||||||  |||||||||| ||||||||||||||||||||||||||| ||||||||||| | | |||||||    
T  7366293 actttgcaggaatttggatcaagcaaaacataaaactcacacaaaattgcataaaatctcgcaaaatagacctatagtcgttgatttttttattttttcg 7366194  T
Q  140 agtgggccgtggcccaccccatcccatgaagggctccgccactg 183  Q
      |||||||||||||||| || ||||| || |||||||||||||    
T  7366193 gatgggccgtggcccacctcagcccataaaaggctccgccactg 7366150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 40 - 183
Target Start/End: Original strand, 34494491 - 34494634
Alignment:
Q  40 actttgcaggaatttggatcaaccacaacataaaaccgacacaaaattacataaaatctcgcaaaatagacctataatcgttgattttctaactttttcg 139  Q
    ||||||||||||||||||||||| | ||||||||||||| |||||||| ||||||||||||||||| ||||||||||||||||||||| ||| ||||  |    
T  34494491 actttgcaggaatttggatcaacaaaaacataaaaccgatacaaaattgcataaaatctcgcaaaagagacctataatcgttgattttttaatttttctg 34494590  T
Q  140 agtgggccgtggcccaccccatcccatgaagggctccgccactg 183  Q
      ||| ||||||||||||| | ||||||| ||||||||||||||    
T  34494591 gatggaccgtggcccaccctagcccatgatgggctccgccactg 34494634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 42 - 181
Target Start/End: Complemental strand, 41699324 - 41699185
Alignment:
Q  42 tttgcaggaatttggatcaaccacaacataaaaccgacacaaaattacataaaatctcgcaaaatagacctataatcgttgattttctaactttttcgag 141  Q
    ||||| ||||||||||||||||| ||||||||||| |||||||||| ||||||||||||||||||| ||||||||||||||||||| ||| |||| ||      
T  41699324 tttgcgggaatttggatcaaccaaaacataaaaccaacacaaaattgcataaaatctcgcaaaatatacctataatcgttgattttttaatttttccgga 41699225  T
Q  142 tgggccgtggcccaccccatcccatgaagggctccgccac 181  Q
    ||||||||| ||||||| | |||||| |||||||||||||    
T  41699224 tgggccgtgacccacccgagcccatggagggctccgccac 41699185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 40 - 147
Target Start/End: Complemental strand, 26293302 - 26293195
Alignment:
Q  40 actttgcaggaatttggatcaaccacaacataaaaccgacacaaaattacataaaatctcgcaaaatagacctataatcgttgattttctaactttttcg 139  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||| ||| |||| ||    
T  26293302 actttgcaggaatttggatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagacctataatcgttaattttttaatttttccg 26293203  T
Q  140 agtgggcc 147  Q
     |||||||    
T  26293202 ggtgggcc 26293195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 40 - 139
Target Start/End: Complemental strand, 31392689 - 31392590
Alignment:
Q  40 actttgcaggaatttggatcaaccacaacataaaaccgacacaaaattacataaaatctcgcaaaatagacctataatcgttgattttctaactttttcg 139  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||  |||||||||| |||||||||||||||| ||| |||||||    
T  31392689 actttgcaggaatttggatcaaccaaaacataaaaccgacacaaaattgcataaaatctaacaaaatagacttataatcgttgattttttaattttttcg 31392590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 42 - 127
Target Start/End: Complemental strand, 42016643 - 42016558
Alignment:
Q  42 tttgcaggaatttggatcaaccacaacataaaaccgacacaaaattacataaaatctcgcaaaatagacctataatcgttgatttt 127  Q
    ||||||||||||||||||||||| ||||||||||| |||||||||| ||||||||||| |||||||||||||||||||||||||||    
T  42016643 tttgcaggaatttggatcaaccaaaacataaaaccaacacaaaattgcataaaatctcacaaaatagacctataatcgttgatttt 42016558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 42 - 182
Target Start/End: Complemental strand, 12995106 - 12994975
Alignment:
Q  42 tttgcaggaatttggatcaaccacaacataaaaccgacacaaaattacataaaatctcgcaaaatagacctataatcgttgattttctaactttttcgag 141  Q
    |||| |||||||||||||||||| ||||||||||||| |||||||| |||||||||||||||| |||||||||||||||||||||| ||| |||||| |     
T  12995106 tttgtaggaatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatctcgcaaattagacctataatcgttgattttttaa-tttttcta- 12995009  T
Q  142 tgggccgtggcccaccccatcccatgaagggctccgccact 182  Q
            ||||||||||| |||||||||||||||||||||    
T  12995008 -------cggcccaccccagcccatgaagggctccgccact 12994975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 44 - 127
Target Start/End: Complemental strand, 16194390 - 16194307
Alignment:
Q  44 tgcaggaatttggatcaaccacaacataaaaccgacacaaaattacataaaatctcgcaaaatagacctataatcgttgatttt 127  Q
    ||||||||||||||||||||| ||||||||||| |||||||||| |||||||||||||||||||||| ||||||||||||||||    
T  16194390 tgcaggaatttggatcaaccaaaacataaaaccaacacaaaattgcataaaatctcgcaaaatagacttataatcgttgatttt 16194307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 40 - 136
Target Start/End: Complemental strand, 11764936 - 11764840
Alignment:
Q  40 actttgcaggaatttggatcaaccacaacataaaaccgacacaaaattacataaaatctcgcaaaatagacctataatcgttgattttctaactttt 136  Q
    |||||||||||||||| |||||||| ||||||||||||||||||| ||  ||||||||| |||||||||||||||||||||||||||| ||| ||||    
T  11764936 actttgcaggaatttgaatcaaccaaaacataaaaccgacacaaagttgtataaaatcttgcaaaatagacctataatcgttgattttttaattttt 11764840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 40 - 136
Target Start/End: Original strand, 26860678 - 26860774
Alignment:
Q  40 actttgcaggaatttggatcaaccacaacataaaaccgacacaaaattacataaaatctcgcaaaatagacctataatcgttgattttctaactttt 136  Q
    |||||| || ||||||||||||||| |||||||||||||||| ||||| ||||||||||||||||||||||||||||| ||||||||| ||| ||||    
T  26860678 actttgtagaaatttggatcaaccaaaacataaaaccgacacgaaattgcataaaatctcgcaaaatagacctataattgttgattttttaattttt 26860774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 40 - 148
Target Start/End: Original strand, 43471470 - 43471578
Alignment:
Q  40 actttgcaggaatttggatcaaccacaacataaaaccgacacaaaattacataaaatctcgcaaaatagacctataatcgttgattttctaactttttcg 139  Q
    |||||||  ||||||||||||| || ||| ||||||||||||||||||  |||||||||||||||||||||||||||||||||||||| ||| |||| ||    
T  43471470 actttgcgagaatttggatcaatcaaaacctaaaaccgacacaaaattgtataaaatctcgcaaaatagacctataatcgttgattttttaatttttccg 43471569  T
Q  140 agtgggccg 148  Q
     ||||||||    
T  43471570 ggtgggccg 43471578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 40 - 127
Target Start/End: Original strand, 19283946 - 19284033
Alignment:
Q  40 actttgcaggaatttggatcaaccacaacataaaaccgacacaaaattacataaaatctcgcaaaatagacctataatcgttgatttt 127  Q
    ||||||||||||||| ||||||||| ||||||||||||| |||||||| |||||||||||||||||||||  ||||||||||||||||    
T  19283946 actttgcaggaatttagatcaaccaaaacataaaaccgatacaaaattgcataaaatctcgcaaaatagatttataatcgttgatttt 19284033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 50 - 175
Target Start/End: Original strand, 17526052 - 17526177
Alignment:
Q  50 aatttggatcaaccacaacataaaaccgacacaaaattacataaaatctcgcaaaatagacctataatcgttgattttctaactttttcgagtgggccgt 149  Q
    ||||| ||||||| | ||| |||||| ||||| |||||  |||||||||||||||||||| ||||||||||| |||||  ||||||||| ||||||  ||    
T  17526052 aatttagatcaactaaaacctaaaactgacactaaattgtataaaatctcgcaaaatagatctataatcgttaattttgcaactttttcaagtgggttgt 17526151  T
Q  150 ggcccaccccatcccatgaagggctc 175  Q
    ||||||||||| ||||||||||||||    
T  17526152 ggcccaccccagcccatgaagggctc 17526177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 42 - 117
Target Start/End: Complemental strand, 42016756 - 42016681
Alignment:
Q  42 tttgcaggaatttggatcaaccacaacataaaaccgacacaaaattacataaaatctcgcaaaatagacctataat 117  Q
    ||||| ||||||||||||||||| ||| ||||||||||| ||||||  ||||||||||||||||||||||||||||    
T  42016756 tttgcgggaatttggatcaaccaaaacttaaaaccgacataaaattgtataaaatctcgcaaaatagacctataat 42016681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 49 - 127
Target Start/End: Original strand, 11935401 - 11935479
Alignment:
Q  49 gaatttggatcaaccacaacataaaaccgacacaaaattacataaaatctcgcaaaatagacctataatcgttgatttt 127  Q
    |||||||||||||||| ||  ||||||||||||||||||  ||||||||||||||||||||| |||||||||| |||||    
T  11935401 gaatttggatcaaccaaaatctaaaaccgacacaaaattgtataaaatctcgcaaaatagacttataatcgttaatttt 11935479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 48 - 137
Target Start/End: Original strand, 3836364 - 3836453
Alignment:
Q  48 ggaatttggatcaaccacaacataaaaccgacacaaaattacataaaatctcgcaaaatagacctataatcgttgattttctaacttttt 137  Q
    ||||||||||||||||| ||| ||||||||||||||||||  ||||||||||| |||||||| ||||| || |||||||| ||| |||||    
T  3836364 ggaatttggatcaaccaaaacctaaaaccgacacaaaattgtataaaatctcgtaaaatagatctatagtccttgattttttaatttttt 3836453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 49 - 117
Target Start/End: Complemental strand, 38763960 - 38763892
Alignment:
Q  49 gaatttggatcaaccacaacataaaaccgacacaaaattacataaaatctcgcaaaatagacctataat 117  Q
    |||||||||||||||| ||| ||||||||||| ||||||  ||||||||||||||||||||||||||||    
T  38763960 gaatttggatcaaccaaaacctaaaaccgacataaaattgtataaaatctcgcaaaatagacctataat 38763892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 42 - 117
Target Start/End: Original strand, 6749911 - 6749986
Alignment:
Q  42 tttgcaggaatttggatcaaccacaacataaaaccgacacaaaattacataaaatctcgcaaaatagacctataat 117  Q
    ||||| ||||||||||||||||| ||| ||||||||||| ||||||  ||||||| ||||||||||||||||||||    
T  6749911 tttgcgggaatttggatcaaccaaaacctaaaaccgacataaaattgtataaaatatcgcaaaatagacctataat 6749986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 50 - 117
Target Start/End: Original strand, 13615876 - 13615943
Alignment:
Q  50 aatttggatcaaccacaacataaaaccgacacaaaattacataaaatctcgcaaaatagacctataat 117  Q
    ||||||||||||||| ||| ||||||||||| ||||||  ||||||||||||||||||||||||||||    
T  13615876 aatttggatcaaccaaaacctaaaaccgacataaaattgtataaaatctcgcaaaatagacctataat 13615943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 42 - 117
Target Start/End: Complemental strand, 16194505 - 16194430
Alignment:
Q  42 tttgcaggaatttggatcaaccacaacataaaaccgacacaaaattacataaaatctcgcaaaatagacctataat 117  Q
    ||||| ||||||||||||||||  ||| ||||||||||| ||||||  ||||||||||||||||||||||||||||    
T  16194505 tttgcgggaatttggatcaaccgaaacctaaaaccgacataaaattgtataaaatctcgcaaaatagacctataat 16194430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 42 - 117
Target Start/End: Complemental strand, 34983529 - 34983454
Alignment:
Q  42 tttgcaggaatttggatcaaccacaacataaaaccgacacaaaattacataaaatctcgcaaaatagacctataat 117  Q
    ||||| ||||||||||||||||  ||| ||||||||||| ||||||  ||||||||||||||||||||||||||||    
T  34983529 tttgctggaatttggatcaaccgaaacctaaaaccgacataaaattgtataaaatctcgcaaaatagacctataat 34983454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 42 - 117
Target Start/End: Original strand, 1114943 - 1115018
Alignment:
Q  42 tttgcaggaatttggatcaaccacaacataaaaccgacacaaaattacataaaatctcgcaaaatagacctataat 117  Q
    ||||||||||||||||||||||  ||| ||||| | ||| ||||||  ||||||||||||||||||||||||||||    
T  1114943 tttgcaggaatttggatcaaccgaaacctaaaatcaacataaaattgtataaaatctcgcaaaatagacctataat 1115018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 42 - 117
Target Start/End: Complemental strand, 2249834 - 2249759
Alignment:
Q  42 tttgcaggaatttggatcaaccacaacataaaaccgacacaaaattacataaaatctcgcaaaatagacctataat 117  Q
    ||||| ||||||||||||||||  ||| ||||||||||| |||||   ||||||||||||||||||||||||||||    
T  2249834 tttgcgggaatttggatcaaccgaaacctaaaaccgacataaaatcgtataaaatctcgcaaaatagacctataat 2249759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 42 - 117
Target Start/End: Complemental strand, 11765047 - 11764972
Alignment:
Q  42 tttgcaggaatttggatcaaccacaacataaaaccgacacaaaattacataaaatctcgcaaaatagacctataat 117  Q
    ||||| ||||||||||||| |   ||||||||||||||| ||||||  ||||||||||||||||||||||||||||    
T  11765047 tttgcgggaatttggatcagctgaaacataaaaccgacataaaattgtataaaatctcgcaaaatagacctataat 11764972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 42 - 117
Target Start/End: Complemental strand, 23869916 - 23869841
Alignment:
Q  42 tttgcaggaatttggatcaaccacaacataaaaccgacacaaaattacataaaatctcgcaaaatagacctataat 117  Q
    ||||| ||||||||||||||||  ||| ||||||||||| ||||||  |||||||||||||||||| |||||||||    
T  23869916 tttgcgggaatttggatcaaccgaaacctaaaaccgacataaaattgtataaaatctcgcaaaatatacctataat 23869841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 42 - 117
Target Start/End: Complemental strand, 26293413 - 26293338
Alignment:
Q  42 tttgcaggaatttggatcaaccacaacataaaaccgacacaaaattacataaaatctcgcaaaatagacctataat 117  Q
    ||||| ||||||||||||||||  ||| ||||||||||| |||||   ||||||||||||||||||||||||||||    
T  26293413 tttgcgggaatttggatcaaccgaaacctaaaaccgacataaaatcgtataaaatctcgcaaaatagacctataat 26293338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 42 - 117
Target Start/End: Original strand, 28745398 - 28745473
Alignment:
Q  42 tttgcaggaatttggatcaaccacaacataaaaccgacacaaaattacataaaatctcgcaaaatagacctataat 117  Q
    ||||| ||||||| ||||||||| ||  |||||||| || ||||||| ||||||||||||||||||||||||||||    
T  28745398 tttgcgggaatttagatcaaccaaaatctaaaaccggcataaaattatataaaatctcgcaaaatagacctataat 28745473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 42 - 117
Target Start/End: Original strand, 36436087 - 36436162
Alignment:
Q  42 tttgcaggaatttggatcaaccacaacataaaaccgacacaaaattacataaaatctcgcaaaatagacctataat 117  Q
    ||||| ||||||||||||||||  ||| ||||| ||||| ||||||  ||||||||||||||||||||||||||||    
T  36436087 tttgcgggaatttggatcaaccgaaacctaaaatcgacataaaattgtataaaatctcgcaaaatagacctataat 36436162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 42 - 117
Target Start/End: Original strand, 44545634 - 44545709
Alignment:
Q  42 tttgcaggaatttggatcaaccacaacataaaaccgacacaaaattacataaaatctcgcaaaatagacctataat 117  Q
    ||||| ||||||||||||||||  ||| ||||||| ||| ||||||  ||||||||||||||||||||||||||||    
T  44545634 tttgcgggaatttggatcaaccgaaacttaaaaccaacataaaattgtataaaatctcgcaaaatagacctataat 44545709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 48 - 183
Target Start/End: Complemental strand, 32100065 - 32099928
Alignment:
Q  48 ggaatttggatcaaccacaacataaaaccgacacaaaattacataaaatctcgcaaaatagacctataatcgttga--ttttctaactttttcgagtggg 145  Q
    ||||||| ||||||||  ||| |||||| |||||||||||  ||||||||||| ||| || |||||| |||||| |  |||| | | ||||||| |||||    
T  32100065 ggaatttagatcaaccgaaacctaaaactgacacaaaattgtataaaatctcgtaaagtatacctatgatcgttaaattttttttattttttcgggtggg 32099966  T
Q  146 ccgtggcccaccccatcccatgaagggctccgccactg 183  Q
      ||||||||||| | ||||||||||||||| ||||||    
T  32099965 ttgtggcccaccctagcccatgaagggctccaccactg 32099928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 40 - 117
Target Start/End: Original strand, 11935278 - 11935355
Alignment:
Q  40 actttgcaggaatttggatcaaccacaacataaaaccgacacaaaattacataaaatctcgcaaaatagacctataat 117  Q
    ||||||| ||||||||||||||||  ||  ||||||||||| ||||||  |||||| |||||||||||||||||||||    
T  11935278 actttgcgggaatttggatcaaccgaaatctaaaaccgacataaaattgtataaaacctcgcaaaatagacctataat 11935355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 91 - 179
Target Start/End: Original strand, 40897728 - 40897816
Alignment:
Q  91 taaaatctcgcaaaatagacctataatcgttgattttctaactttttcgagtgggccgtggcccaccccatcccatgaagggctccgcc 179  Q
    ||||||||||| ||||| ||||||||||| | ||||| | | ||||||| ||||| |||||||||||||| ||||| ||||||| ||||    
T  40897728 taaaatctcgcgaaataaacctataatcgctaatttttttattttttcgggtgggtcgtggcccaccccaacccataaagggcttcgcc 40897816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 42 - 117
Target Start/End: Original strand, 1020973 - 1021048
Alignment:
Q  42 tttgcaggaatttggatcaaccacaacataaaaccgacacaaaattacataaaatctcgcaaaatagacctataat 117  Q
    ||||| |||||||| |||||||  ||| ||||||||||| ||||||  |||||||||| |||||||||||||||||    
T  1020973 tttgcgggaatttgaatcaaccgaaacctaaaaccgacataaaattgtataaaatctctcaaaatagacctataat 1021048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 50 - 117
Target Start/End: Original strand, 26860575 - 26860642
Alignment:
Q  50 aatttggatcaaccacaacataaaaccgacacaaaattacataaaatctcgcaaaatagacctataat 117  Q
    |||| |||||||||  ||| ||||||||||| ||||||  ||||||||||||||||||||||||||||    
T  26860575 aattgggatcaaccgaaacctaaaaccgacataaaattgtataaaatctcgcaaaatagacctataat 26860642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 42 - 117
Target Start/End: Complemental strand, 38527426 - 38527352
Alignment:
Q  42 tttgcaggaatttggatcaaccacaacataaaaccgacacaaaattacataaaatctcgcaaaatagacctataat 117  Q
    ||||| ||||||||||||||||  ||| ||||||||||| ||||||  |||||||||||||||||| |||||||||    
T  38527426 tttgcgggaatttggatcaaccgaaacctaaaaccgacataaaattgtataaaatctcgcaaaata-acctataat 38527352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 49 - 117
Target Start/End: Complemental strand, 31392792 - 31392724
Alignment:
Q  49 gaatttggatcaaccacaacataaaaccgacacaaaattacataaaatctcgcaaaatagacctataat 117  Q
    ||||| ||||||| |  ||| ||||||||||| ||||||  ||||||||||||||||||||||||||||    
T  31392792 gaattgggatcaatcgaaacctaaaaccgacataaaattgtataaaatctcgcaaaatagacctataat 31392724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 40 - 140
Target Start/End: Original strand, 31643627 - 31643727
Alignment:
Q  40 actttgcaggaatttggatcaaccacaacataaaaccgacacaaaattacataaaatctcgcaaaatagacctataatcgttgattttctaactttttcg 139  Q
    ||||||| |||||||| ||||  |  ||| ||||||||||| ||||||  ||||||||||| ||||||||| |||| | ||||||||| ||| |||||||    
T  31643627 actttgcgggaatttgaatcaggcgaaacttaaaaccgacataaaattgtataaaatctcgtaaaatagacatatagtggttgattttttaattttttcg 31643726  T
Q  140 a 140  Q
    |    
T  31643727 a 31643727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 42 - 109
Target Start/End: Complemental strand, 7366404 - 7366337
Alignment:
Q  42 tttgcaggaatttggatcaaccacaacataaaaccgacacaaaattacataaaatctcgcaaaataga 109  Q
    ||||| |||||||||||||| |  ||| ||||||||||| ||||||  ||||||||||||||||||||    
T  7366404 tttgcgggaatttggatcaatcgaaacctaaaaccgacataaaattgtataaaatctcgcaaaataga 7366337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 70 - 175
Target Start/End: Complemental strand, 27640739 - 27640634
Alignment:
Q  70 taaaaccgacacaaaattacataaaatctcgcaaaatagacctataatcgttgattttctaactttttcgagtgggccgtggcccaccccatcccatgaa 169  Q
    ||||||||  ||||||||   ||||||||||||||||| |||||  ||||||  |||| ||| |||| | | |||| |||||||||||||| ||||| ||    
T  27640739 taaaaccgcaacaaaattgtttaaaatctcgcaaaataaacctaggatcgttagttttttaatttttcctaatgggtcgtggcccaccccagcccataaa 27640640  T
Q  170 gggctc 175  Q
    ||||||    
T  27640639 gggctc 27640634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 133 - 186
Target Start/End: Complemental strand, 42473610 - 42473557
Alignment:
Q  133 tttttcgagtgggccgtggcccaccccatcccatgaagggctccgccactgatg 186  Q
    ||||||| ||| |||||||||||||||| |||||||||||||||| | ||||||    
T  42473610 tttttcgggtgagccgtggcccaccccagcccatgaagggctccgaccctgatg 42473557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 132 - 179
Target Start/End: Complemental strand, 9467604 - 9467557
Alignment:
Q  132 ctttttcgagtgggccgtggcccaccccatcccatgaagggctccgcc 179  Q
    ||||||||  |||||||||||||| |||||||||||||||||| ||||    
T  9467604 ctttttcggatgggccgtggcccatcccatcccatgaagggctacgcc 9467557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 91 - 139
Target Start/End: Original strand, 1538204 - 1538252
Alignment:
Q  91 taaaatctcgcaaaatagacctataatcgttgattttctaactttttcg 139  Q
    |||||||||||| |||||||||||||| ||| ||||| ||| |||||||    
T  1538204 taaaatctcgcataatagacctataattgttaattttttaattttttcg 1538252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 109; Significance: 7e-55; HSPs: 3)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 109; E-Value: 7e-55
Query Start/End: Original strand, 40 - 184
Target Start/End: Complemental strand, 65076 - 64932
Alignment:
Q  40 actttgcaggaatttggatcaaccacaacataaaaccgacacaaaattacataaaatctcgcaaaatagacctataatcgttgattttctaactttttcg 139  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||| ||||| |||| ||| |||| ||    
T  65076 actttgcaggaatttggatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagacctataagcgttgtttttttaatttttccg 64977  T
Q  140 agtgggccgtggcccaccccatcccatgaagggctccgccactga 184  Q
     |||||||||||||||||||| |||||||||||||||||||||||    
T  64976 ggtgggccgtggcccaccccagcccatgaagggctccgccactga 64932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 42 - 117
Target Start/End: Complemental strand, 65301 - 65226
Alignment:
Q  42 tttgcaggaatttggatcaaccacaacataaaaccgacacaaaattacataaaatctcgcaaaatagacctataat 117  Q
    ||||| |||||| |||||||||  ||| ||||||||||| ||||||  ||||||||||||||||||||||||||||    
T  65301 tttgcgggaattgggatcaaccgaaacctaaaaccgacataaaattgtataaaatctcgcaaaatagacctataat 65226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 42 - 117
Target Start/End: Complemental strand, 65187 - 65112
Alignment:
Q  42 tttgcaggaatttggatcaaccacaacataaaaccgacacaaaattacataaaatctcgcaaaatagacctataat 117  Q
    ||||| |||||| |||||||||  ||| ||||||||||| ||||||  |||||||||| |||||||||||||||||    
T  65187 tttgcgggaattgggatcaaccgaaacctaaaaccgacataaaattgtataaaatctcacaaaatagacctataat 65112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 108; Significance: 3e-54; HSPs: 58)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 40 - 183
Target Start/End: Complemental strand, 26873845 - 26873702
Alignment:
Q  40 actttgcaggaatttggatcaaccacaacataaaaccgacacaaaattacataaaatctcgcaaaatagacctataatcgttgattttctaactttttcg 139  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||  ||||||||||||||||||||||||||||| |||||||| ||| |||| ||    
T  26873845 actttgcaggaatttggatcaaccaaaacataaaaccgacacaaaattgtataaaatctcgcaaaatagacctataatcattgattttttaatttttccg 26873746  T
Q  140 agtgggccgtggcccaccccatcccatgaagggctccgccactg 183  Q
     |||||||||||||||||||| ||||||||||||||||||||||    
T  26873745 ggtgggccgtggcccaccccagcccatgaagggctccgccactg 26873702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 40 - 183
Target Start/End: Complemental strand, 46027822 - 46027679
Alignment:
Q  40 actttgcaggaatttggatcaaccacaacataaaaccgacacaaaattacataaaatctcgcaaaatagacctataatcgttgattttctaactttttcg 139  Q
    |||||||| |||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||| |||| ||    
T  46027822 actttgcaagaatttggatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagacctataatcgttgattttttaatttttccg 46027723  T
Q  140 agtgggccgtggcccaccccatcccatgaagggctccgccactg 183  Q
     |||| ||||||||||||||| |||| |||||||||||||||||    
T  46027722 ggtggaccgtggcccaccccagcccacgaagggctccgccactg 46027679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 40 - 186
Target Start/End: Original strand, 36675503 - 36675649
Alignment:
Q  40 actttgcaggaatttggatcaaccacaacataaaaccgacacaaaattacataaaatctcgcaaaatagacctataatcgttgattttctaactttttcg 139  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||| ||||||||| |||||||| || ||||| ||| |||||||    
T  36675503 actttgcaggaatttggatcaaccaaaacataaaaccgacacaaaattgcataaaatctcacaaaatagatctataatcattaattttttaattttttcg 36675602  T
Q  140 agtgggccgtggcccaccccatcccatgaagggctccgccactgatg 186  Q
      ||||||||||||||||||| |||||||||||||||||||||||||    
T  36675603 gatgggccgtggcccaccccagcccatgaagggctccgccactgatg 36675649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 40 - 186
Target Start/End: Complemental strand, 17167008 - 17166862
Alignment:
Q  40 actttgcaggaatttggatcaaccacaacataaaaccgacacaaaattacataaaatctcgcaaaatagacctataatcgttgattttctaactttttcg 139  Q
    ||||||||||||||||||||||||| ||||||||||||| |||||||| ||||||||||||||||||||| ||||||| ||||||||| ||| ||||  |    
T  17167008 actttgcaggaatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatctcgcaaaatagaactataattgttgattttttaatttttctg 17166909  T
Q  140 agtgggccgtggcccaccccatcccatgaagggctccgccactgatg 186  Q
     |||||||||||||||||||| |||||||||||||||||| ||||||    
T  17166908 ggtgggccgtggcccaccccagcccatgaagggctccgccgctgatg 17166862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 40 - 184
Target Start/End: Original strand, 36358326 - 36358470
Alignment:
Q  40 actttgcaggaatttggatcaaccacaacataaaaccgacacaaaattacataaaatctcgcaaaatagacctataatcgttgattttctaactttttcg 139  Q
    ||||||||||||||||||||||||| ||||||||||||| |||||||| |||||||| |||||||||||| ||||||||||||||||| ||| |||| |     
T  36358326 actttgcaggaatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatgtcgcaaaatagatctataatcgttgattttttaatttttcca 36358425  T
Q  140 agtgggccgtggcccaccccatcccatgaagggctccgccactga 184  Q
     |||| ||||||||||||||| |||||||||||||||||||||||    
T  36358426 ggtggaccgtggcccaccccagcccatgaagggctccgccactga 36358470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 40 - 180
Target Start/End: Original strand, 44468037 - 44468177
Alignment:
Q  40 actttgcaggaatttggatcaaccacaacataaaaccgacacaaaattacataaaatctcgcaaaatagacctataatcgttgattttctaactttttcg 139  Q
    ||||||||||||||||||||||||| ||||||||||| |||||||||| ||||||||||||||||||||| ||||||||||||||||| ||| |||| |     
T  44468037 actttgcaggaatttggatcaaccaaaacataaaaccaacacaaaattgcataaaatctcgcaaaatagatctataatcgttgattttttaatttttcca 44468136  T
Q  140 agtgggccgtggcccaccccatcccatgaagggctccgcca 180  Q
     |||||||||||||||||||| || ||||||||||||||||    
T  44468137 ggtgggccgtggcccaccccagcctatgaagggctccgcca 44468177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 40 - 183
Target Start/End: Complemental strand, 43859233 - 43859090
Alignment:
Q  40 actttgcaggaatttggatcaaccacaacataaaaccgacacaaaattacataaaatctcgcaaaatagacctataatcgttgattttctaactttttcg 139  Q
    ||||||||||||||||||||||||| ||||||||||||| |||||||| |||||||||||||||| | |||||||||||||||||||| ||| |||| |     
T  43859233 actttgcaggaatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatctcgcaaattcgacctataatcgttgattttttaatttttcca 43859134  T
Q  140 agtgggccgtggcccaccccatcccatgaagggctccgccactg 183  Q
     |||||||||||||||||| | ||||||||||||||||||||||    
T  43859133 ggtgggccgtggcccaccctagcccatgaagggctccgccactg 43859090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 40 - 183
Target Start/End: Complemental strand, 45350193 - 45350051
Alignment:
Q  40 actttgcaggaatttggatcaaccacaacataaaaccgacacaaaattacataaaatctcgcaaaatagacctataatcgttgattttctaactttttcg 139  Q
    ||||||||| ||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||| ||| |||| ||    
T  45350193 actttgcagaaatttggatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagacttataatcgttgattttttaatttttccg 45350094  T
Q  140 agtgggccgtggcccaccccatcccatgaagggctccgccactg 183  Q
     |||| |||||||||| |||| ||||||||||||||||||||||    
T  45350093 ggtggaccgtggccca-cccagcccatgaagggctccgccactg 45350051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 40 - 183
Target Start/End: Original strand, 44724079 - 44724222
Alignment:
Q  40 actttgcaggaatttggatcaaccacaacataaaaccgacacaaaattacataaaatctcgcaaaatagacctataatcgttgattttctaactttttcg 139  Q
    ||||||||||||||| ||||||||| ||||||||||||||||||||||  |||||||||| ||||||| ||||||||| |||| |||| ||| |||| ||    
T  44724079 actttgcaggaatttagatcaaccaaaacataaaaccgacacaaaattgtataaaatctctcaaaataaacctataatagttggttttttaatttttccg 44724178  T
Q  140 agtgggccgtggcccaccccatcccatgaagggctccgccactg 183  Q
     |||||||||||||||||||| ||||||||||||||||||||||    
T  44724179 ggtgggccgtggcccaccccagcccatgaagggctccgccactg 44724222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 40 - 148
Target Start/End: Original strand, 22723792 - 22723900
Alignment:
Q  40 actttgcaggaatttggatcaaccacaacataaaaccgacacaaaattacataaaatctcgcaaaatagacctataatcgttgattttctaactttttcg 139  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||| ||| |||| ||    
T  22723792 actttgcaggaatttggatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaagtagacctataatcgttgattttttaatttttccg 22723891  T
Q  140 agtgggccg 148  Q
     ||||||||    
T  22723892 ggtgggccg 22723900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 40 - 174
Target Start/End: Complemental strand, 9624138 - 9624004
Alignment:
Q  40 actttgcaggaatttggatcaaccacaacataaaaccgacacaaaattacataaaatctcgcaaaatagacctataatcgttgattttctaactttt-tc 138  Q
    |||||| |||||||||||||||||| || |||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||| ||| ||||  |    
T  9624138 actttgtaggaatttggatcaaccaaaatataaaaccaacacaaaattgcataaaatctcgcaaaatagacctataatcgttgattttttaatttttccc 9624039  T
Q  139 gagtgggccgtggcccaccccatcccatgaagggct 174  Q
    | ||||||||||||||| |||| |||||||||||||    
T  9624038 gggtgggccgtggccca-cccagcccatgaagggct 9624004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 40 - 180
Target Start/End: Original strand, 16834293 - 16834433
Alignment:
Q  40 actttgcaggaatttggatcaaccacaacataaaaccgacacaaaattacataaaatctcgcaaaatagacctataatcgttgattttctaactttttcg 139  Q
    ||||||||| ||||||||||||||| |||||||||| ||||||||||| |||||||| |  ||||||| ||||||||||||||||||| | | |||| ||    
T  16834293 actttgcagaaatttggatcaaccaaaacataaaactgacacaaaattgcataaaattttacaaaataaacctataatcgttgatttttttatttttccg 16834392  T
Q  140 agtgggccgtggcccaccccatcccatgaagggctccgcca 180  Q
      |||||| |||||||||||| |||||||||||||||||||    
T  16834393 gatgggccatggcccaccccagcccatgaagggctccgcca 16834433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 40 - 185
Target Start/End: Complemental strand, 44142904 - 44142761
Alignment:
Q  40 actttgcaggaatttggatcaaccacaacataaaaccgacacaaaattacataaaatctcgcaaaatagacctataatcgttgattttctaactttttcg 139  Q
    ||||||||||||||||||||||  | ||||||||||| |||||||||| ||||||||||||||||||| ||||||||||||||||||| ||| ||||  |    
T  44142904 actttgcaggaatttggatcaaagaaaacataaaaccaacacaaaattgcataaaatctcgcaaaatatacctataatcgttgattttttaatttttctg 44142805  T
Q  140 agtgggccgtggcccaccccatcccatgaagggctccgccactgat 185  Q
      ||||||  ||||||||| | ||||||||||||| ||||||||||    
T  44142804 gatgggcc--ggcccacccgagcccatgaagggcttcgccactgat 44142761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 40 - 136
Target Start/End: Complemental strand, 31428879 - 31428783
Alignment:
Q  40 actttgcaggaatttggatcaaccacaacataaaaccgacacaaaattacataaaatctcgcaaaatagacctataatcgttgattttctaactttt 136  Q
    |||||||||||||||||||||| || |||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||| ||| ||||    
T  31428879 actttgcaggaatttggatcaatcaaaacataaaaccgacacaaaattgcataaaatcttgcaaaatagacctataatcgttgattttttaattttt 31428783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 40 - 147
Target Start/End: Original strand, 29075201 - 29075308
Alignment:
Q  40 actttgcaggaatttggatcaaccacaacataaaaccgacacaaaattacataaaatctcgcaaaatagacctataatcgttgattttctaactttttcg 139  Q
    |||||||| |||||||||||||||| |||||||||||||||||||||| |||||||| |||||||||||||||||| ||||||||||| ||| |||| ||    
T  29075201 actttgcaagaatttggatcaaccaaaacataaaaccgacacaaaattgcataaaatatcgcaaaatagacctatagtcgttgattttttaatttttccg 29075300  T
Q  140 agtgggcc 147  Q
     |||||||    
T  29075301 ggtgggcc 29075308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 40 - 126
Target Start/End: Original strand, 31065639 - 31065725
Alignment:
Q  40 actttgcaggaatttggatcaaccacaacataaaaccgacacaaaattacataaaatctcgcaaaatagacctataatcgttgattt 126  Q
    ||||||||||||||||||| ||||| |||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||    
T  31065639 actttgcaggaatttggattaaccaaaacataaaaccgacacaaaattgcataaaatctcgtaaaatagacctataatcgttgattt 31065725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 42 - 147
Target Start/End: Original strand, 18104337 - 18104441
Alignment:
Q  42 tttgcaggaatttggatcaaccacaacataaaaccgacacaaaattacataaaatctcgcaaaatagacctataatcgttgattttctaactttttcgag 141  Q
    ||||| ||||||||||||||||| ||||| |||||||||||||||| |||||| |||||||||||||||||||||||||||||||| ||| |||| ||||    
T  18104337 tttgcgggaatttggatcaaccaaaacatgaaaccgacacaaaattgcataaa-tctcgcaaaatagacctataatcgttgattttttaatttttccgag 18104435  T
Q  142 tgggcc 147  Q
    ||||||    
T  18104436 tgggcc 18104441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 40 - 180
Target Start/End: Complemental strand, 39976463 - 39976329
Alignment:
Q  40 actttgcaggaatttggatcaaccacaacataaaaccgacacaaaattacataaaatctcgcaaaatagacctataatcgttgattttctaactttttcg 139  Q
    |||||| |||||||||||||||||| ||||||||||||| |||||||| |||||||||||||||| ||||| |||||||||||||||| ||  |||||||    
T  39976463 actttgtaggaatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatctcgcaaattagacatataatcgttgattttttatttttttcg 39976364  T
Q  140 agtgggccgtggcccaccccatcccatgaagggctccgcca 180  Q
     |||      || |||||||| |||||||||||||||||||    
T  39976363 ggtg------gggccaccccaacccatgaagggctccgcca 39976329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 42 - 185
Target Start/End: Complemental strand, 8461839 - 8461696
Alignment:
Q  42 tttgcaggaatttggatcaaccacaacataaaaccgacacaaaattacataaaatctcgcaaaatagacctataatcgttgattttctaactttttcgag 141  Q
    ||||| ||||||||||||||||  ||| |||||| |||| ||||||  ||||||| |||||||||||||||||||||||| ||||| ||| |||| |  |    
T  8461839 tttgcgggaatttggatcaaccgaaacctaaaacagacataaaattgtataaaatatcgcaaaatagacctataatcgttaattttttaatttttccagg 8461740  T
Q  142 tgggccgtggcccaccccatcccatgaagggctccgccactgat 185  Q
    |||| |||| ||||||||| |||||||||||||| |||||||||    
T  8461739 tgggtcgtgacccaccccagcccatgaagggctctgccactgat 8461696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 40 - 127
Target Start/End: Original strand, 42241945 - 42242032
Alignment:
Q  40 actttgcaggaatttggatcaaccacaacataaaaccgacacaaaattacataaaatctcgcaaaatagacctataatcgttgatttt 127  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||| |||| || |||||||||||||||||||    
T  42241945 actttgcaggaatttggatcaaccaaaacataaaaccgacacaaaattgcataaaatctcacaaattaaacctataatcgttgatttt 42242032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 76 - 184
Target Start/End: Original strand, 23562699 - 23562807
Alignment:
Q  76 cgacacaaaattacataaaatctcgcaaaatagacctataatcgttgattttctaactttttcgagtgggccgtggcccaccccatcccatgaagggctc 175  Q
    ||||||||||||  |||||||||||||||||||| ||||||||||||||||| ||| |||| |  ||||||| |||||||||||| | ||||||||||||    
T  23562699 cgacacaaaattgtataaaatctcgcaaaatagatctataatcgttgattttttaatttttccaggtgggccatggcccaccccagctcatgaagggctc 23562798  T
Q  176 cgccactga 184  Q
    |||||||||    
T  23562799 cgccactga 23562807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 40 - 176
Target Start/End: Complemental strand, 41367801 - 41367666
Alignment:
Q  40 actttgcaggaatttggatcaaccacaacataaaaccgacacaaaattacataaaatctcgcaaaatagacctataatcgttgattttctaactttttcg 139  Q
    |||||| || ||||||||||||||| || |||||| ||| |||||||| |||||||||||||||| ||||||||||||  |||||||| ||| |||| ||    
T  41367801 actttgtagaaatttggatcaaccaaaatataaaatcgatacaaaattgcataaaatctcgcaaattagacctataat-attgattttttaatttttccg 41367703  T
Q  140 agtgggccgtggcccaccccatcccatgaagggctcc 176  Q
     |||  ||||||||||||||| |||||||||||||||    
T  41367702 ggtgaaccgtggcccaccccaacccatgaagggctcc 41367666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 40 - 111
Target Start/End: Original strand, 23469412 - 23469483
Alignment:
Q  40 actttgcaggaatttggatcaaccacaacataaaaccgacacaaaattacataaaatctcgcaaaatagacc 111  Q
    ||||||||||||||||||||||||| || ||||||||||||||||||| |||||||||||||||||||||||    
T  23469412 actttgcaggaatttggatcaaccaaaatataaaaccgacacaaaattgcataaaatctcgcaaaatagacc 23469483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 40 - 179
Target Start/End: Original strand, 29502148 - 29502287
Alignment:
Q  40 actttgcaggaatttggatcaaccacaacataaaaccgacacaaaattacataaaatctcgcaaaatagacctataatcgttgattttctaactttttcg 139  Q
    ||||||| ||||||||||||   |  ||| ||||||| ||||||||||  ||||||||| |||||||| |||||| |||||| ||||| ||| |||||||    
T  29502148 actttgcgggaatttggatctgtcgaaacctaaaaccaacacaaaattgaataaaatcttgcaaaatatacctattatcgttaattttttaaatttttcg 29502247  T
Q  140 agtgggccgtggcccaccccatcccatgaagggctccgcc 179  Q
     |||||| ||||||||||| | ||||||||||||||||||    
T  29502248 ggtgggctgtggcccaccctagcccatgaagggctccgcc 29502287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 34 - 184
Target Start/End: Complemental strand, 8727870 - 8727720
Alignment:
Q  34 tatactactttgcaggaatttggatcaaccacaacataaaaccgacacaaaattacataaaatctcgcaaaatagacctataatcgttgattttctaact 133  Q
    ||||| |||||| | |||||||||||| ||  ||||||||| | ||||||||| ||||||||||| | ||||||||| |||  |||||  |||| | | |    
T  8727870 tataccactttgtaagaatttggatcagccgaaacataaaatcaacacaaaatgacataaaatcttgtaaaatagacatatggtcgttagtttttttaat 8727771  T
Q  134 ttttcgagtgggccgtggcccaccccatcccatgaagggctccgccactga 184  Q
    |||||| ||||| |||||||||||| | |||||||||||||||||| ||||    
T  8727770 ttttcgggtgggtcgtggcccaccctagcccatgaagggctccgcctctga 8727720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 42 - 128
Target Start/End: Original strand, 31931929 - 31932015
Alignment:
Q  42 tttgcaggaatttggatcaaccacaacataaaaccgacacaaaattacataaaatctcgcaaaatagacctataatcgttgattttc 128  Q
    ||||| ||||||||||||||||  ||| ||||||||||| |||||   |||||||||||||||||||||||||||||||||||||||    
T  31931929 tttgcgggaatttggatcaaccgaaacctaaaaccgacataaaatcgtataaaatctcgcaaaatagacctataatcgttgattttc 31932015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 42 - 117
Target Start/End: Complemental strand, 9624249 - 9624174
Alignment:
Q  42 tttgcaggaatttggatcaaccacaacataaaaccgacacaaaattacataaaatctcgcaaaatagacctataat 117  Q
    ||||| ||||||||||||||||| ||| ||||||||||| ||||||  ||||||||||| ||||||||||||||||    
T  9624249 tttgcgggaatttggatcaaccaaaacctaaaaccgacataaaattgtataaaatctcggaaaatagacctataat 9624174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 42 - 117
Target Start/End: Original strand, 31065528 - 31065603
Alignment:
Q  42 tttgcaggaatttggatcaaccacaacataaaaccgacacaaaattacataaaatctcgcaaaatagacctataat 117  Q
    ||||| ||||||||||||||||  ||| ||||||||||| ||||||  ||||||||||||||||||||||||||||    
T  31065528 tttgcgggaatttggatcaaccgaaacctaaaaccgacataaaattgtataaaatctcgcaaaatagacctataat 31065603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 48 - 117
Target Start/End: Original strand, 36675398 - 36675467
Alignment:
Q  48 ggaatttggatcaaccacaacataaaaccgacacaaaattacataaaatctcgcaaaatagacctataat 117  Q
    ||||||||||||||||  ||| ||||||||||| ||||||  ||||||||||||||||||||||||||||    
T  36675398 ggaatttggatcaaccgaaacttaaaaccgacataaaattgtataaaatctcgcaaaatagacctataat 36675467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 48 - 117
Target Start/End: Original strand, 44723974 - 44724043
Alignment:
Q  48 ggaatttggatcaaccacaacataaaaccgacacaaaattacataaaatctcgcaaaatagacctataat 117  Q
    ||||||||||||||||  ||| ||||||||||| ||||||  ||||||||||||||||||||||||||||    
T  44723974 ggaatttggatcaaccgaaacctaaaaccgacataaaattgtataaaatctcgcaaaatagacctataat 44724043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 42 - 117
Target Start/End: Complemental strand, 17167120 - 17167045
Alignment:
Q  42 tttgcaggaatttggatcaaccacaacataaaaccgacacaaaattacataaaatctcgcaaaatagacctataat 117  Q
    ||||| |||||| |||||||||  ||| ||||||||||| ||||||  ||||||||||||||||||||||||||||    
T  17167120 tttgcgggaattgggatcaaccgaaacctaaaaccgacataaaattgtataaaatctcgcaaaatagacctataat 17167045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 40 - 183
Target Start/End: Original strand, 22499794 - 22499937
Alignment:
Q  40 actttgcaggaatttggatcaaccacaacataaaaccgacacaaaattacataaaatctcgcaaaatagacctataatcgttgattttctaactttttcg 139  Q
    ||||||| ||||||| ||| ||||  ||| ||||||||| | ||||||  ||||||| ||||||||||||||||| |||||| ||||| ||| |||| ||    
T  22499794 actttgcgggaatttagattaaccgaaacctaaaaccgatataaaattgaataaaatttcgcaaaatagacctatgatcgttaattttttaaattttccg 22499893  T
Q  140 agtgggccgtggcccaccccatcccatgaagggctccgccactg 183  Q
     |||  ||||| |||| |||| | ||| |||||||| |||||||    
T  22499894 ggtgtaccgtgacccaacccagctcataaagggctctgccactg 22499937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 50 - 117
Target Start/End: Original strand, 29075098 - 29075165
Alignment:
Q  50 aatttggatcaaccacaacataaaaccgacacaaaattacataaaatctcgcaaaatagacctataat 117  Q
    ||||||||||||||  ||| ||||||||||| ||||||  ||||||||||||||||||||||||||||    
T  29075098 aatttggatcaaccgaaacttaaaaccgacataaaattgtataaaatctcgcaaaatagacctataat 29075165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 42 - 117
Target Start/End: Complemental strand, 40055844 - 40055769
Alignment:
Q  42 tttgcaggaatttggatcaaccacaacataaaaccgacacaaaattacataaaatctcgcaaaatagacctataat 117  Q
    ||||| ||||||||||||||||  ||| |||||| |||| ||||||  ||||||||||||||||||||||||||||    
T  40055844 tttgcgggaatttggatcaaccgaaacctaaaactgacataaaattgtataaaatctcgcaaaatagacctataat 40055769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 42 - 117
Target Start/End: Complemental strand, 44143014 - 44142939
Alignment:
Q  42 tttgcaggaatttggatcaaccacaacataaaaccgacacaaaattacataaaatctcgcaaaatagacctataat 117  Q
    ||||| |||||||||||||| || ||  ||||||||||| ||||||  ||||||||||||||||||||||||||||    
T  44143014 tttgcgggaatttggatcaatcaaaatctaaaaccgacataaaattgtataaaatctcgcaaaatagacctataat 44142939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 97 - 183
Target Start/End: Complemental strand, 19692553 - 19692467
Alignment:
Q  97 ctcgcaaaatagacctataatcgttgattttctaactttttcgagtgggccgtggcccaccccatcccatgaagggctccgccactg 183  Q
    ||||||||||||||||| |  |||| ||||| |||||||| |  |||| |||||| |||||||| ||||||||||||||||||||||    
T  19692553 ctcgcaaaatagacctacatccgttaattttttaacttttccaggtggaccgtggtccaccccagcccatgaagggctccgccactg 19692467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 49 - 107
Target Start/End: Complemental strand, 40055724 - 40055666
Alignment:
Q  49 gaatttggatcaaccacaacataaaaccgacacaaaattacataaaatctcgcaaaata 107  Q
    |||||||||||||||| |||||| |||||| |||||||| |||||||||||||||||||    
T  40055724 gaatttggatcaaccaaaacatacaaccgatacaaaattgcataaaatctcgcaaaata 40055666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 101 - 184
Target Start/End: Complemental strand, 29663015 - 29662931
Alignment:
Q  101 caaaatagacctataatcgttgattttct-aactttttcgagtgggccgtggcccaccccatcccatgaagggctccgccactga 184  Q
    ||||||||||||||  ||||| ||||| | || ||||||| ||||||||| |||||||| | |||||||||||||||||||||||    
T  29663015 caaaatagacctatggtcgttaatttttttaattttttcgggtgggccgtagcccaccctagcccatgaagggctccgccactga 29662931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 71 - 183
Target Start/End: Complemental strand, 30781122 - 30781010
Alignment:
Q  71 aaaaccgacacaaaattacataaaatctcgcaaaatagacctataatcgttgattttctaactttttcgagtgggccgtggcccaccccatcccatgaag 170  Q
    |||||| ||||||||||  ||||||| | ||||| |||| |||| |||||| ||||| ||| ||||||   |||| |||||||||||| | |||||||||    
T  30781122 aaaacctacacaaaattgtataaaattttgcaaagtagatctatgatcgttaattttttaattttttcagatgggtcgtggcccaccctaacccatgaag 30781023  T
Q  171 ggctccgccactg 183  Q
    |||||| ||||||    
T  30781022 ggctccaccactg 30781010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 103 - 183
Target Start/End: Complemental strand, 40054378 - 40054298
Alignment:
Q  103 aaatagacctataatcgttgattttctaactttttcgagtgggccgtggcccaccccatcccatgaagggctccgccactg 183  Q
    ||||| ||||| ||||||||||||| |||  ||| |||||| |||||||||||||||| |||||| |||| ||||||||||    
T  40054378 aaataaacctagaatcgttgattttttaatctttccgagtgagccgtggcccaccccagcccatggagggttccgccactg 40054298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 42 - 117
Target Start/End: Original strand, 22723681 - 22723756
Alignment:
Q  42 tttgcaggaatttggatcaaccacaacataaaaccgacacaaaattacataaaatctcgcaaaatagacctataat 117  Q
    ||||| |||| |||||||||||  ||  ||||||||||| ||||||  ||||||||||||||||||||||||||||    
T  22723681 tttgcgggaaattggatcaaccgaaatctaaaaccgacataaaattgtataaaatctcgcaaaatagacctataat 22723756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 42 - 117
Target Start/End: Original strand, 23469301 - 23469376
Alignment:
Q  42 tttgcaggaatttggatcaaccacaacataaaaccgacacaaaattacataaaatctcgcaaaatagacctataat 117  Q
    ||||| |||||| ||||||||   ||| ||||||||||| ||||||  ||||||||||||||||||||||||||||    
T  23469301 tttgcgggaattgggatcaacagaaacctaaaaccgacataaaattgtataaaatctcgcaaaatagacctataat 23469376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 42 - 117
Target Start/End: Original strand, 36358215 - 36358290
Alignment:
Q  42 tttgcaggaatttggatcaaccacaacataaaaccgacacaaaattacataaaatctcgcaaaatagacctataat 117  Q
    ||||| ||||||||||||||||  ||| ||||| ||||| ||||||  |||||||||||||||||||| |||||||    
T  36358215 tttgcgggaatttggatcaaccgaaacctaaaatcgacataaaattgtataaaatctcgcaaaatagatctataat 36358290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 42 - 117
Target Start/End: Complemental strand, 43859344 - 43859269
Alignment:
Q  42 tttgcaggaatttggatcaaccacaacataaaaccgacacaaaattacataaaatctcgcaaaatagacctataat 117  Q
    ||||||| ||||||||||||||  ||| ||||||||||  ||||||  |||||||||| |||||||||||||||||    
T  43859344 tttgcagaaatttggatcaaccgaaacctaaaaccgacgtaaaattgtataaaatctcacaaaatagacctataat 43859269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 42 - 117
Target Start/End: Complemental strand, 45350304 - 45350229
Alignment:
Q  42 tttgcaggaatttggatcaaccacaacataaaaccgacacaaaattacataaaatctcgcaaaatagacctataat 117  Q
    ||||| |||||||| |||||||  ||| ||||| ||||| ||||||  ||||||||||||||||||||||||||||    
T  45350304 tttgcgggaatttgaatcaaccgaaacctaaaatcgacataaaattgtataaaatctcgcaaaatagacctataat 45350229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 42 - 117
Target Start/End: Complemental strand, 46027933 - 46027858
Alignment:
Q  42 tttgcaggaatttggatcaaccacaacataaaaccgacacaaaattacataaaatctcgcaaaatagacctataat 117  Q
    ||||| ||||||||||||||||  ||  |||||| |||| ||||||  ||||||||||||||||||||||||||||    
T  46027933 tttgcgggaatttggatcaacctaaatctaaaactgacataaaattgtataaaatctcgcaaaatagacctataat 46027858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 40 - 114
Target Start/End: Original strand, 46828852 - 46828926
Alignment:
Q  40 actttgcaggaatttggatcaaccacaacataaaaccgacacaaaattacataaaatctcgcaaaatagacctat 114  Q
    ||||||| ||||||||||||||||  ||| ||| ||||||| ||||||  | |||||||||||||||||||||||    
T  46828852 actttgcgggaatttggatcaaccgaaacctaataccgacataaaattgtacaaaatctcgcaaaatagacctat 46828926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 50 - 111
Target Start/End: Original strand, 22566606 - 22566667
Alignment:
Q  50 aatttggatcaaccacaacataaaaccgacacaaaattacataaaatctcgcaaaatagacc 111  Q
    ||||||||||| ||  ||| ||||||||||||||||||  ||||||||||||||||||||||    
T  22566606 aatttggatcagccgaaacttaaaaccgacacaaaattgtataaaatctcgcaaaatagacc 22566667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 49 - 113
Target Start/End: Complemental strand, 25174280 - 25174216
Alignment:
Q  49 gaatttggatcaaccacaacataaaaccgacacaaaattacataaaatctcgcaaaatagaccta 113  Q
    |||||||||||||||  ||| ||||||| ||||| ||||| ||||||||||||||||| ||||||    
T  25174280 gaatttggatcaaccgaaacctaaaaccaacacataattatataaaatctcgcaaaattgaccta 25174216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 42 - 117
Target Start/End: Original strand, 44467926 - 44468001
Alignment:
Q  42 tttgcaggaatttggatcaaccacaacataaaaccgacacaaaattacataaaatctcgcaaaatagacctataat 117  Q
    ||||| ||||||||||||||    ||| ||||||| ||| ||||||  ||||||||||||||||||||||||||||    
T  44467926 tttgcgggaatttggatcaattgaaacctaaaaccaacataaaattgtataaaatctcgcaaaatagacctataat 44468001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 70 - 183
Target Start/End: Complemental strand, 9014504 - 9014391
Alignment:
Q  70 taaaaccgacacaaaattacataaaatctcgcaaaatagacctataatcgttgattttctaactttttcgag-tgggccgtggcccaccccatcccatga 168  Q
    ||||||||||||||||||  |||||||||    || |||||||||  ||||| ||||| ||| |||||| || | || ||||||||||| || |||||||    
T  9014504 taaaaccgacacaaaattgtataaaatcttaagaagtagacctatcttcgttaattttttaa-tttttctaggtaggtcgtggcccaccacagcccatga 9014406  T
Q  169 agggctccgccactg 183  Q
    |||||||||||||||    
T  9014405 agggctccgccactg 9014391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 50 - 116
Target Start/End: Complemental strand, 41367904 - 41367838
Alignment:
Q  50 aatttggatcaaccacaacataaaaccgacacaaaattacataaaatctcgcaaaatagacctataa 116  Q
    ||||||||||||| | ||| ||||||||||| ||| ||  |||||||||| ||||||||||||||||    
T  41367904 aatttggatcaactaaaacctaaaaccgacataaatttgtataaaatctcacaaaatagacctataa 41367838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 70 - 179
Target Start/End: Complemental strand, 9013928 - 9013819
Alignment:
Q  70 taaaaccgacacaaaattacataaaatctcgcaaaatagacctataatcgttgattttctaactttttcgagtgggccgtggcccaccccatcccatgaa 169  Q
    |||||||||||||||||   |||||||||    |||||||||||| || ||| ||||| ||| ||||  | || |||| | |||||||||| ||||||||    
T  9013928 taaaaccgacacaaaatcgtataaaatcttaagaaatagacctatgattgttaattttttaatttttctgggttggccattgcccaccccagcccatgaa 9013829  T
Q  170 gggctccgcc 179  Q
    ||||||||||    
T  9013828 gggctccgcc 9013819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 48 - 117
Target Start/End: Original strand, 42241840 - 42241909
Alignment:
Q  48 ggaatttggatcaaccacaacataaaaccgacacaaaattacataaaatctcgcaaaatagacctataat 117  Q
    ||||||||||||||||  ||  ||||||||||| ||||||  ||||||||||| |||||||| |||||||    
T  42241840 ggaatttggatcaaccgaaatctaaaaccgacataaaattgtataaaatctcgtaaaatagatctataat 42241909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 70 - 117
Target Start/End: Complemental strand, 31428962 - 31428915
Alignment:
Q  70 taaaaccgacacaaaattacataaaatctcgcaaaatagacctataat 117  Q
    ||||||||||| ||||||  |||||||||||||||||||| |||||||    
T  31428962 taaaaccgacataaaattttataaaatctcgcaaaatagatctataat 31428915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 70 - 121
Target Start/End: Complemental strand, 40883394 - 40883343
Alignment:
Q  70 taaaaccgacacaaaattacataaaatctcgcaaaatagacctataatcgtt 121  Q
    |||||||||||||||| |  ||||||||||||| |||||||||||| |||||    
T  40883394 taaaaccgacacaaaagtgtataaaatctcgcataatagacctatagtcgtt 40883343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 183 - 244
Target Start/End: Original strand, 38029564 - 38029625
Alignment:
Q  183 gatgtcatggacataatatgatatgatacagtaccaatgtctatgataattaatattatgaa 244  Q
    ||||||||||| ||| |||| |||| ||||||||||| ||||||| |  |||||||||||||    
T  38029564 gatgtcatggaaatattatgttatggtacagtaccaacgtctatgcttcttaatattatgaa 38029625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 70 - 118
Target Start/End: Complemental strand, 6961159 - 6961111
Alignment:
Q  70 taaaaccgacacaaaattacataaaatctcgcaaaatagacctataatc 118  Q
    ||||||||||||||||||  ||||||||| |||||||| || |||||||    
T  6961159 taaaaccgacacaaaattgtataaaatcttgcaaaataaacatataatc 6961111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0050 (Bit Score: 101; Significance: 4e-50; HSPs: 2)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 40 - 180
Target Start/End: Complemental strand, 19188 - 19048
Alignment:
Q  40 actttgcaggaatttggatcaaccacaacataaaaccgacacaaaattacataaaatctcgcaaaatagacctataatcgttgattttctaactttttcg 139  Q
    ||||||||||||||||||| ||||| |||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||| | | |||| ||    
T  19188 actttgcaggaatttggataaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagacctatgatcgttgatttttttatttttccg 19089  T
Q  140 agtgggccgtggcccaccccatcccatgaagggctccgcca 180  Q
     |||||||||||||||||||| |||||||||||||||||||    
T  19088 ggtgggccgtggcccaccccagcccatgaagggctccgcca 19048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0050; HSP #2
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 48 - 117
Target Start/End: Complemental strand, 19293 - 19224
Alignment:
Q  48 ggaatttggatcaaccacaacataaaaccgacacaaaattacataaaatctcgcaaaatagacctataat 117  Q
    ||||||||||||||||  ||| ||||||||||| ||||||  |||||||||||||||||||| |||||||    
T  19293 ggaatttggatcaaccgaaacctaaaaccgacataaaattgtataaaatctcgcaaaatagatctataat 19224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 101; Significance: 4e-50; HSPs: 40)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 40 - 184
Target Start/End: Original strand, 2660854 - 2660998
Alignment:
Q  40 actttgcaggaatttggatcaaccacaacataaaaccgacacaaaattacataaaatctcgcaaaatagacctataatcgttgattttctaactttttcg 139  Q
    ||||||||||||||||||||| ||| ||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||| ||| |||| ||    
T  2660854 actttgcaggaatttggatcatccaaaacataaaaccgatacaaaattgcataaaatctcgcaaaatagacctataatcgttgattttttaatttttccg 2660953  T
Q  140 agtgggccgtggcccaccccatcccatgaagggctccgccactga 184  Q
     ||||| ||||||||| |||| |||||||||||||||||||||||    
T  2660954 ggtgggtcgtggcccatcccagcccatgaagggctccgccactga 2660998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 40 - 183
Target Start/End: Complemental strand, 12698637 - 12698493
Alignment:
Q  40 actttgcaggaatttggatcaaccacaacataaaaccgacacaaaattacataaaatctcgcaaaatagacctataatcgttgattttctaacttttt-c 138  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||  |||||||||||||||||||||||||||| ||||||||| ||| ||||| |    
T  12698637 actttgcaggaatttggatcaaccaaaacataaaaccgacacaaaattgtataaaatctcgcaaaatagacctataattgttgattttttaaatttttcc 12698538  T
Q  139 gagtgggccgtggcccaccccatcccatgaagggctccgccactg 183  Q
    | || ||||||||||||||||| ||||||||||||||||||||||    
T  12698537 gggtcggccgtggcccaccccagcccatgaagggctccgccactg 12698493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 40 - 185
Target Start/End: Original strand, 24635486 - 24635631
Alignment:
Q  40 actttgcaggaatttggatcaaccacaacataaaaccgacacaaaattacataaaatctcgcaaaatagacctataatcgttgattttctaactttttcg 139  Q
    ||||||||||||||||||||||||| ||||||||||| | |||||||| |||||||||||||||| |||||||||||||||||||||| ||| |||| ||    
T  24635486 actttgcaggaatttggatcaaccaaaacataaaaccaatacaaaattgcataaaatctcgcaaattagacctataatcgttgattttttaatttttccg 24635585  T
Q  140 agtgggccgtggcccaccccatcccatgaagggctccgccactgat 185  Q
      ||||||||||||||||||| ||||||||||||| ||||||||||    
T  24635586 gatgggccgtggcccaccccagcccatgaagggcttcgccactgat 24635631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 40 - 183
Target Start/End: Original strand, 9079071 - 9079214
Alignment:
Q  40 actttgcaggaatttggatcaaccacaacataaaaccgacacaaaattacataaaatctcgcaaaatagacctataatcgttgattttctaactttttcg 139  Q
    ||||||||||||||||||||||||| ||||||||||||| |||||||| |||||||||||||||| |||||||||||||||||||||| ||| |||| ||    
T  9079071 actttgcaggaatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatctcgcaaattagacctataatcgttgattttttaatttttccg 9079170  T
Q  140 agtgggccgtggcccaccccatcccatgaagggctccgccactg 183  Q
      ||||| |||||||||||||  |||||||||||||||||||||    
T  9079171 gatgggctgtggcccaccccagtccatgaagggctccgccactg 9079214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 40 - 183
Target Start/End: Complemental strand, 8560568 - 8560426
Alignment:
Q  40 actttgcaggaatttggatcaaccacaacataaaaccgacacaaaattacataaaatctcgcaaaatagacctataatcgttgattttctaactttttcg 139  Q
    ||||||||||||||||||||||||| ||||||||||| | |||||||| |||||||||||||||  |||||||||||||||||||||| ||| |||||||    
T  8560568 actttgcaggaatttggatcaaccaaaacataaaaccaatacaaaattgcataaaatctcgcaatttagacctataatcgttgattttttaattttttcg 8560469  T
Q  140 agtgggccgtggcccaccccatcccatgaagggctccgccactg 183  Q
     ||||||||||| |||||||| ||| ||||||||||||||||||    
T  8560468 ggtgggccgtgg-ccaccccaacccttgaagggctccgccactg 8560426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 40 - 181
Target Start/End: Original strand, 24130260 - 24130396
Alignment:
Q  40 actttgcaggaatttggatcaaccacaacataaaaccgacacaaaattacataaaatctcgcaaaatagacctataatcgttgattttctaactttttcg 139  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||     |||||||||||||||| ||| |||| ||    
T  24130260 actttgcaggaatttggatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaat-----tataatcgttgattttttaatttttccg 24130354  T
Q  140 agtgggccgtggcccaccccatcccatgaagggctccgccac 181  Q
     |||||| ||||||||||||| ||||||||||||||||||||    
T  24130355 ggtgggcagtggcccaccccagcccatgaagggctccgccac 24130396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 40 - 183
Target Start/End: Original strand, 16461425 - 16461568
Alignment:
Q  40 actttgcaggaatttggatcaaccacaacataaaaccgacacaaaattacataaaatctcgcaaaatagacctataatcgttgattttctaactttttcg 139  Q
    |||||| |||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||| | |||||||||||||||| |||  ||| ||    
T  16461425 actttgaaggaatttggatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaataggcttataatcgttgattttttaatatttccg 16461524  T
Q  140 agtgggccgtggcccaccccatcccatgaagggctccgccactg 183  Q
     |||||||||| |||||||||  ||||||||| |||||||||||    
T  16461525 ggtgggccgtgacccaccccagtccatgaaggactccgccactg 16461568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 48 - 185
Target Start/End: Original strand, 13405387 - 13405524
Alignment:
Q  48 ggaatttggatcaaccacaacataaaaccgacacaaaattacataaaatctcgcaaaatagacctataatcgttgattttctaactttttcgagtgggcc 147  Q
    |||||||||||||| |  ||| ||||||||||||||||||  |||||||||||||||||||||||||||||||| ||||| ||| ||||||| ||||| |    
T  13405387 ggaatttggatcaatcgaaacctaaaaccgacacaaaattgtataaaatctcgcaaaatagacctataatcgttaattttttaattttttcgggtgggtc 13405486  T
Q  148 gtggcccaccccatcccatgaagggctccgccactgat 185  Q
    ||||||||||||| |||||||||||||||||| |||||    
T  13405487 gtggcccaccccaacccatgaagggctccgcctctgat 13405524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 40 - 183
Target Start/End: Complemental strand, 26468591 - 26468448
Alignment:
Q  40 actttgcaggaatttggatcaaccacaacataaaaccgacacaaaattacataaaatctcgcaaaatagacctataatcgttgattttctaactttttcg 139  Q
    |||||||||||||||||||||| || |  |||||||||||||||||||  |||||||||||||||||||||||||||| ||||||||| ||| |||| |     
T  26468591 actttgcaggaatttggatcaagcaaattataaaaccgacacaaaattgtataaaatctcgcaaaatagacctataatagttgattttttaatttttcca 26468492  T
Q  140 agtgggccgtggcccaccccatcccatgaagggctccgccactg 183  Q
    ||||| |||||||||| |||| |||||||| |||||||||||||    
T  26468491 agtggaccgtggcccatcccagcccatgaaaggctccgccactg 26468448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 40 - 183
Target Start/End: Original strand, 11450520 - 11450667
Alignment:
Q  40 actttgcaggaatttggatcaaccacaacataaaaccgacacaaaattacataaaatctcgcaaaatagacctataatcgttgattttctaactttttcg 139  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||| ||||| |||||||||||||||  ||||||||||||| ||  || |||| ||    
T  11450520 actttgcaggaatttggatcaaccaaaacataaaaccgacacaaaattgcataagatctcgcaaaatagatatataatcgttgatatttaaatttttccg 11450619  T
Q  140 agtgggccgtggcccac----cccatcccatgaagggctccgccactg 183  Q
     ||||||||||||||||    |||| ||||||||||||||||||||||    
T  11450620 ggtgggccgtggcccaccccacccagcccatgaagggctccgccactg 11450667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 183 - 268
Target Start/End: Complemental strand, 28078790 - 28078705
Alignment:
Q  183 gatgtcatggacataatatgatatgatacagtaccaatgtctatgataattaatattatgaatttaatcagaacaattatgacatt 268  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  28078790 gatgtcatggacataatatgatatggtacagtaccaatgtctatgataattaatattatgaatttaattagaacaattatgacatt 28078705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 40 - 180
Target Start/End: Original strand, 34023558 - 34023698
Alignment:
Q  40 actttgcaggaatttggatcaaccacaacataaaaccgacacaaaattacataaaatctcgcaaaatagacctataatcgttgattttctaactttttcg 139  Q
    ||||||||| ||||| ||||||||| ||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||| ||| ||||||     
T  34023558 actttgcagaaatttagatcaaccaaaacataaaaccgacacaaaattatataaaatctcgtaaaatagacctataatcgttgattttttaattttttca 34023657  T
Q  140 agtgggccgtggcccaccccatcccatgaagggctccgcca 180  Q
     |||||||||  |||| ||||  |||| || ||||||||||    
T  34023658 ggtgggccgtaacccatcccagtccataaaaggctccgcca 34023698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 40 - 136
Target Start/End: Complemental strand, 15469232 - 15469136
Alignment:
Q  40 actttgcaggaatttggatcaaccacaacataaaaccgacacaaaattacataaaatctcgcaaaatagacctataatcgttgattttctaactttt 136  Q
    |||||||||||||||||||||| || |||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||| ||| ||||    
T  15469232 actttgcaggaatttggatcaatcaaaacataaaaccgacacaaaattgcataaaatcttgcaaaatagacctataatcgttgattttttaattttt 15469136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 40 - 136
Target Start/End: Complemental strand, 7021960 - 7021864
Alignment:
Q  40 actttgcaggaatttggatcaaccacaacataaaaccgacacaaaattacataaaatctcgcaaaatagacctataatcgttgattttctaactttt 136  Q
    ||||||||||||||||||||||||| |||||||||| ||||||||||| |||||||||||||||||||||||||||||| || ||||| ||| ||||    
T  7021960 actttgcaggaatttggatcaaccaaaacataaaactgacacaaaattgcataaaatctcgcaaaatagacctataatcattaattttttaattttt 7021864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 42 - 165
Target Start/End: Original strand, 23259086 - 23259210
Alignment:
Q  42 tttgcaggaatttggatcaaccacaacataaaaccgacacaaaattacataaaatctcgcaaaatagacctataatcgttgattttctaa-ctttttcga 140  Q
    ||||||| |||||| |||||||| ||||||||||||| | |||||| |||||||||||||||  | |||||||||| ||||||||| |||  |||||||     
T  23259086 tttgcagaaatttgaatcaaccaaaacataaaaccgatagaaaattgcataaaatctcgcaagttggacctataattgttgattttttaatttttttcgc 23259185  T
Q  141 gtgggccgtggcccaccccatccca 165  Q
    |||||||||||||||||||| ||||    
T  23259186 gtgggccgtggcccaccccacccca 23259210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 40 - 136
Target Start/End: Complemental strand, 34127640 - 34127544
Alignment:
Q  40 actttgcaggaatttggatcaaccacaacataaaaccgacacaaaattacataaaatctcgcaaaatagacctataatcgttgattttctaactttt 136  Q
    ||||||||||||||||||||||||| | ||||||||||| ||||||||  ||||||||||||||||||||| |||||| ||||||||| ||| ||||    
T  34127640 actttgcaggaatttggatcaaccaaatcataaaaccgatacaaaattgtataaaatctcgcaaaatagacttataatagttgattttttaattttt 34127544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 48 - 183
Target Start/End: Complemental strand, 12996418 - 12996284
Alignment:
Q  48 ggaatttggatcaaccacaacataaaaccgacacaaaattacataaaatctcgcaaaatagacctataatcgttgattttctaactttttcgagtgggcc 147  Q
    |||||||| ||||| |  ||| ||||||||| ||||||||  |||||||||||||||||| | |||| ||| |||||||| ||| |||| ||||| |||     
T  12996418 ggaatttgcatcaatcgaaacctaaaaccgatacaaaattgtataaaatctcgcaaaatatatctattatcattgattttttaa-ttttccgagtaggct 12996320  T
Q  148 gtggcccaccccatcccatgaagggctccgccactg 183  Q
    ||||||||||||| ||||||||||||||||||||||    
T  12996319 gtggcccaccccaacccatgaagggctccgccactg 12996284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 191 - 268
Target Start/End: Original strand, 8674808 - 8674885
Alignment:
Q  191 ggacataatatgatatgatacagtaccaatgtctatgataattaatattatgaatttaatcagaacaattatgacatt 268  Q
    ||||||||||||||||| |||| ||||||| | ||||||||||||||||||||||||||| | |||||||||||||||    
T  8674808 ggacataatatgatatggtacaataccaatatatatgataattaatattatgaatttaattaaaacaattatgacatt 8674885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 191 - 268
Target Start/End: Original strand, 8685487 - 8685564
Alignment:
Q  191 ggacataatatgatatgatacagtaccaatgtctatgataattaatattatgaatttaatcagaacaattatgacatt 268  Q
    ||||||||||||||||| |||| ||||||| | ||||||||||||||||||||||||||| | |||||||||||||||    
T  8685487 ggacataatatgatatggtacaataccaatatatatgataattaatattatgaatttaattaaaacaattatgacatt 8685564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 42 - 117
Target Start/End: Complemental strand, 34127751 - 34127676
Alignment:
Q  42 tttgcaggaatttggatcaaccacaacataaaaccgacacaaaattacataaaatctcgcaaaatagacctataat 117  Q
    ||||||||||||||||||||||  ||| ||||||||||| ||||||  ||||||||| ||||||||||||||||||    
T  34127751 tttgcaggaatttggatcaaccgaaacctaaaaccgacataaaattgtataaaatcttgcaaaatagacctataat 34127676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 91 - 185
Target Start/End: Original strand, 2399372 - 2399466
Alignment:
Q  91 taaaatctcgcaaaatagacctataatcgttgattttctaactttttcgagtgggccgtggcccaccccatcccatgaagggctccgccactgat 185  Q
    |||||||||||| |||||||||||||| ||| |||||  |  ||||||  |||||| ||||||||||||| |||||||||||||||||| |||||    
T  2399372 taaaatctcgcagaatagacctataattgttcatttttaatttttttcaggtgggctgtggcccaccccaacccatgaagggctccgcccctgat 2399466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 42 - 183
Target Start/End: Complemental strand, 10290598 - 10290457
Alignment:
Q  42 tttgcaggaatttggatcaaccacaa-cataaaaccgacacaaaattacataaaatctcgcaaaatagacctataatcgttgattttctaactttttcga 140  Q
    ||||||| |||||||||||||   || | ||| ||||||||||| ||  ||||||||||||||| ||||||||| |||||| ||||| ||| || |  |     
T  10290598 tttgcagaaatttggatcaacttgaaacctaacaccgacacaaa-ttgtataaaatctcgcaaagtagacctatgatcgttaattttttaatttctctgg 10290500  T
Q  141 gtgggccgtggcccaccccatcccatgaagggctccgccactg 183  Q
    ||||||| |||||||||| | ||||||||||||||||||||||    
T  10290499 gtgggccatggcccaccctagcccatgaagggctccgccactg 10290457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 48 - 117
Target Start/End: Complemental strand, 7022065 - 7021996
Alignment:
Q  48 ggaatttggatcaaccacaacataaaaccgacacaaaattacataaaatctcgcaaaatagacctataat 117  Q
    ||||||||||||||||  ||| ||||||||||| ||||||  ||||||||||||||||||||||||||||    
T  7022065 ggaatttggatcaaccgaaacctaaaaccgacataaaattgtataaaatctcgcaaaatagacctataat 7021996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 40 - 127
Target Start/End: Original strand, 14883177 - 14883265
Alignment:
Q  40 actttgcaggaatttggatcaaccacaacataaaaccgacac-aaaattacataaaatctcgcaaaatagacctataatcgttgatttt 127  Q
    ||||||| ||||||||||||||||  ||| ||||| |||||| ||||||  |||||||||||| |||||||| ||||||||||||||||    
T  14883177 actttgcgggaatttggatcaaccgaaacctaaaatcgacaccaaaattgtataaaatctcgcgaaatagacttataatcgttgatttt 14883265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 42 - 117
Target Start/End: Original strand, 2660743 - 2660818
Alignment:
Q  42 tttgcaggaatttggatcaaccacaacataaaaccgacacaaaattacataaaatctcgcaaaatagacctataat 117  Q
    ||||| ||||||||||||||||  ||| ||||| ||||| ||||||  ||||||||||||||||||||||||||||    
T  2660743 tttgcgggaatttggatcaaccgaaacctaaaatcgacataaaattgtataaaatctcgcaaaatagacctataat 2660818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 42 - 117
Target Start/End: Complemental strand, 26468702 - 26468627
Alignment:
Q  42 tttgcaggaatttggatcaaccacaacataaaaccgacacaaaattacataaaatctcgcaaaatagacctataat 117  Q
    ||||| ||||||||||||||||  ||| |||||| |||| ||||||  ||||||||||||||||||||||||||||    
T  26468702 tttgcgggaatttggatcaaccgaaacctaaaactgacataaaattgtataaaatctcgcaaaatagacctataat 26468627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 40 - 117
Target Start/End: Complemental strand, 12996541 - 12996464
Alignment:
Q  40 actttgcaggaatttggatcaaccacaacataaaaccgacacaaaattacataaaatctcgcaaaatagacctataat 117  Q
    ||||||| ||||||||||| ||||  ||| ||||||||||| ||||||  |||||||||||||||||||| |||||||    
T  12996541 actttgcgggaatttggattaaccgaaacctaaaaccgacataaaattgtataaaatctcgcaaaatagatctataat 12996464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 42 - 117
Target Start/End: Original strand, 11450409 - 11450484
Alignment:
Q  42 tttgcaggaatttggatcaaccacaacataaaaccgacacaaaattacataaaatctcgcaaaatagacctataat 117  Q
    ||||| ||||||||||||||||  ||| ||||||||||| ||||||  ||||||||||| |||||||||| |||||    
T  11450409 tttgcgggaatttggatcaaccgaaacctaaaaccgacataaaattgtataaaatctcgtaaaatagaccaataat 11450484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 42 - 117
Target Start/End: Original strand, 23258859 - 23258934
Alignment:
Q  42 tttgcaggaatttggatcaaccacaacataaaaccgacacaaaattacataaaatctcgcaaaatagacctataat 117  Q
    ||||||| ||||||||||||||| ||  ||||||||||  ||||||  |||||||||| |||||||||||||||||    
T  23258859 tttgcagaaatttggatcaaccaaaagctaaaaccgacgtaaaattgtataaaatctcacaaaatagacctataat 23258934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 42 - 117
Target Start/End: Original strand, 23258973 - 23259048
Alignment:
Q  42 tttgcaggaatttggatcaaccacaacataaaaccgacacaaaattacataaaatctcgcaaaatagacctataat 117  Q
    ||||||| ||||||||||||||| ||  ||||||||||  ||||||  |||||||||| |||||||||||||||||    
T  23258973 tttgcagaaatttggatcaaccaaaagctaaaaccgacgtaaaattgtataaaatctcacaaaatagacctataat 23259048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 49 - 175
Target Start/End: Complemental strand, 31489955 - 31489832
Alignment:
Q  49 gaatttggatcaaccacaacataaaaccgacacaaaattacataaaatctcgcaaaatagacctataatcgttgattttctaactttttcgagtgggccg 148  Q
    |||||||||| ||| | ||| ||||| ||| ||||||||| |||||||||| ||||||||||  || |||||| ||||| ||| ||||||| ||||| |     
T  31489955 gaatttggattaactaaaacttaaaatcgatacaaaattatataaaatctcacaaaatagac--attatcgttaatttt-taaatttttcgggtgggtct 31489859  T
Q  149 tggcccaccccatcccatgaagggctc 175  Q
    |||||||||| | || |||||||||||    
T  31489858 tggcccaccctagcctatgaagggctc 31489832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 42 - 117
Target Start/End: Original strand, 34023447 - 34023522
Alignment:
Q  42 tttgcaggaatttggatcaaccacaacataaaaccgacacaaaattacataaaatctcgcaaaatagacctataat 117  Q
    ||||| ||||||||||||||||  ||| ||||||||||| ||||||  ||||||||||| |||||||| |||||||    
T  34023447 tttgcgggaatttggatcaaccgaaacctaaaaccgacataaaattgtataaaatctcgtaaaatagatctataat 34023522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 70 - 117
Target Start/End: Complemental strand, 15469315 - 15469268
Alignment:
Q  70 taaaaccgacacaaaattacataaaatctcgcaaaatagacctataat 117  Q
    ||||||||||| ||||||  ||||||||||||||||||||||||||||    
T  15469315 taaaaccgacataaaattgtataaaatctcgcaaaatagacctataat 15469268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 42 - 111
Target Start/End: Complemental strand, 12698747 - 12698678
Alignment:
Q  42 tttgcaggaatttggatcaaccacaacataaaaccgacacaaaattacataaaatctcgcaaaatagacc 111  Q
    ||||| ||||||||||||||||  ||| ||||| ||||| ||||||  |||||||||| |||||||||||    
T  12698747 tttgcgggaatttggatcaaccgaaacctaaaagcgacataaaattgtataaaatctcacaaaatagacc 12698678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 48 - 117
Target Start/End: Original strand, 24130155 - 24130224
Alignment:
Q  48 ggaatttggatcaaccacaacataaaaccgacacaaaattacataaaatctcgcaaaatagacctataat 117  Q
    ||||||||||||||||  ||| |||||||| || |||||   |||||| |||||||||||||||||||||    
T  24130155 ggaatttggatcaaccgaaacctaaaaccggcataaaatcgtataaaaactcgcaaaatagacctataat 24130224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 90 - 171
Target Start/End: Original strand, 31969048 - 31969129
Alignment:
Q  90 ataaaatctcgcaaaatagacctataatcgttgattttctaactttttcgagtgggccgtggcccaccccatcccatgaagg 171  Q
    ||||||||||||||| ||||||||| |||||| |||||  || ||||  | |||||| ||||||||||| | ||||||||||    
T  31969048 ataaaatctcgcaaagtagacctatgatcgttaatttttaaatttttatgggtgggctgtggcccaccctagcccatgaagg 31969129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 42 - 117
Target Start/End: Original strand, 16461313 - 16461389
Alignment:
Q  42 tttgcaggaatttggatcaaccacaacataaaacc-gacacaaaattacataaaatctcgcaaaatagacctataat 117  Q
    ||||| |||||||| ||||||   ||| ||||||| |||| ||||||| ||||||||||||||||||||| ||||||    
T  16461313 tttgcgggaatttgaatcaactgaaacctaaaacccgacataaaattatataaaatctcgcaaaatagacatataat 16461389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 50 - 117
Target Start/End: Complemental strand, 8560671 - 8560604
Alignment:
Q  50 aatttggatcaaccacaacataaaaccgacacaaaattacataaaatctcgcaaaatagacctataat 117  Q
    ||||||||||||||  ||| ||||||||||  ||||||  |||||||||| ||||||||| |||||||    
T  8560671 aatttggatcaaccgaaacctaaaaccgacgtaaaattgtataaaatctcacaaaatagatctataat 8560604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 91 - 176
Target Start/End: Complemental strand, 2044961 - 2044876
Alignment:
Q  91 taaaatctcgcaaaatagacctataatcgttgattttctaactttttcgagtgggccgtggcccaccccatcccatgaagggctcc 176  Q
    |||||||||||| |||| || |||||| ||| ||||| ||| ||||||  | |||  ||||||||||||| |||||||| ||||||    
T  2044961 taaaatctcgcataatatacatataattgttaattttttaattttttcaggcgggttgtggcccaccccagcccatgaaaggctcc 2044876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 40 - 171
Target Start/End: Complemental strand, 7536599 - 7536468
Alignment:
Q  40 actttgcaggaatttggatcaaccacaacataaaaccgacacaaaattacataaaatctcgcaaaatagacctataatcgttgattttctaactttttc- 138  Q
    |||||||  |||||| ||||| ||  ||| |||||  |||||||||||  ||||||||   ||||||||| ||||||||||| ||||| ||| ||||||     
T  7536599 actttgcgagaatttagatcagccgaaacctaaaattgacacaaaattgtataaaatcctacaaaatagatctataatcgttaatttt-taaatttttct 7536501  T
Q  139 gagtgggccgtggcccaccccatcccatgaagg 171  Q
    |  ||| ||||||||||||| | ||||||||||    
T  7536500 ggatggaccgtggcccaccctaacccatgaagg 7536468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0131 (Bit Score: 75; Significance: 1e-34; HSPs: 2)
Name: scaffold0131
Description:

Target: scaffold0131; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 34 - 183
Target Start/End: Complemental strand, 11326 - 11166
Alignment:
Q  34 tatactactttgcaggaatttggatcaaccacaacataaaaccgacacaaaattacataaaatctcgcaaaatagacctataatcgttgattttctaact 133  Q
    ||||| |||||||| |||||||||||||||| ||||||||||||| |||||||| ||||||||||||||||||| | ||||||||||||||||| ||| |    
T  11326 tataccactttgcacgaatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatctcgcaaaataaatctataatcgttgattttttaatt 11227  T
Q  134 ttttc-----------gagtgggccgtggcccaccccatcccatgaagggctccgccactg 183  Q
    ||| |           | |||||||||||||||||||| ||||||||||||||||||||||    
T  11226 tttccgggtgggccaagggtgggccgtggcccaccccagcccatgaagggctccgccactg 11166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0131; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 37 - 117
Target Start/End: Complemental strand, 11436 - 11356
Alignment:
Q  37 actactttgcaggaatttggatcaaccacaacataaaaccgacacaaaattacataaaatctcgcaaaatagacctataat 117  Q
    |||| ||||| ||||||||||||||||  ||| ||||||||||| ||||||  ||||||||||||||||| || |||||||    
T  11436 actaatttgcgggaatttggatcaaccgaaacctaaaaccgacataaaattgtataaaatctcgcaaaattgatctataat 11356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 72; Significance: 8e-33; HSPs: 2)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 40 - 127
Target Start/End: Complemental strand, 331914 - 331827
Alignment:
Q  40 actttgcaggaatttggatcaaccacaacataaaaccgacacaaaattacataaaatctcgcaaaatagacctataatcgttgatttt 127  Q
    ||||||||||||||||||||||||| ||||||||||||| |||||||| |||||||||| ||||||||||||||||||||||||||||    
T  331914 actttgcaggaatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatcttgcaaaatagacctataatcgttgatttt 331827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 49 - 117
Target Start/End: Complemental strand, 332018 - 331950
Alignment:
Q  49 gaatttggatcaaccacaacataaaaccgacacaaaattacataaaatctcgcaaaatagacctataat 117  Q
    |||||||||||||||  ||| ||||| ||||| ||||||  |||||||||||||||||||| |||||||    
T  332018 gaatttggatcaaccgaaacctaaaatcgacataaaattgtataaaatctcgcaaaatagatctataat 331950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0978 (Bit Score: 68; Significance: 2e-30; HSPs: 2)
Name: scaffold0978
Description:

Target: scaffold0978; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 40 - 147
Target Start/End: Complemental strand, 1246 - 1139
Alignment:
Q  40 actttgcaggaatttggatcaaccacaacataaaaccgacacaaaattacataaaatctcgcaaaatagacctataatcgttgattttctaactttttcg 139  Q
    ||||||||||||||||||||||||| ||||||||| |||||||||||| |||||||||||| ||| |||||||||| ||||||||||| ||| |||| ||    
T  1246 actttgcaggaatttggatcaaccaaaacataaaatcgacacaaaattgcataaaatctcgaaaagtagacctatagtcgttgattttttaatttttccg 1147  T
Q  140 agtgggcc 147  Q
     |||||||    
T  1146 ggtgggcc 1139  T

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Target: scaffold0978; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 49 - 117
Target Start/End: Complemental strand, 1350 - 1282
Alignment:
Q  49 gaatttggatcaaccacaacataaaaccgacacaaaattacataaaatctcgcaaaatagacctataat 117  Q
    |||||||||||||||  ||| ||||||||||| ||||||  ||||||||||||||||||||| ||||||    
T  1350 gaatttggatcaaccgaaacctaaaaccgacataaaattgtataaaatctcgcaaaatagacatataat 1282  T

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Target: scaffold0003 (Bit Score: 51; Significance: 3e-20; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 70 - 184
Target Start/End: Original strand, 303864 - 303977
Alignment:
Q  70 taaaaccgacacaaaattacataaaatctcgcaaaatagacctataatcgttgattttctaactttttcgagtgggccgtggcccaccccatcccatgaa 169  Q
    ||||||||||| ||||||  |||||||||| ||||||| | || |||||||| ||||| ||| |||| ||||||||||||| ||||||| | ||||||||    
T  303864 taaaaccgacataaaattgtataaaatctcacaaaataaatctttaatcgttaatttt-taatttttccgagtgggccgtgacccaccctagcccatgaa 303962  T
Q  170 gggctccgccactga 184  Q
    |||||||||| ||||    
T  303963 gggctccgcctctga 303977  T

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Target: scaffold0041 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 70 - 121
Target Start/End: Original strand, 82890 - 82941
Alignment:
Q  70 taaaaccgacacaaaattacataaaatctcgcaaaatagacctataatcgtt 121  Q
    |||||||||||||||| |  ||||||||||||| |||||||||||| |||||    
T  82890 taaaaccgacacaaaagtgtataaaatctcgcataatagacctatagtcgtt 82941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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