View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF15379_low_4 (Length: 354)

Name: NF15379_low_4
Description: NF15379
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF15379_low_4
NF15379_low_4
[»] chr5 (44 HSPs)
chr5 (1-151)||(30839790-30839940)
chr5 (1-151)||(36597588-36597738)
chr5 (1-151)||(40512960-40513110)
chr5 (160-326)||(41791599-41791765)
chr5 (20-151)||(6863584-6863715)
chr5 (1-151)||(2795532-2795682)
chr5 (1-151)||(8103599-8103749)
chr5 (1-149)||(10664986-10665134)
chr5 (1-151)||(24014707-24014857)
chr5 (189-337)||(41780169-41780321)
chr5 (1-131)||(11249996-11250126)
chr5 (1-151)||(35469561-35469713)
chr5 (1-151)||(30328346-30328496)
chr5 (1-151)||(34578020-34578170)
chr5 (160-328)||(41786739-41786915)
chr5 (1-151)||(31365969-31366121)
chr5 (1-148)||(9184216-9184363)
chr5 (1-151)||(12642012-12642162)
chr5 (1-151)||(15190881-15191032)
chr5 (34-144)||(18150454-18150566)
chr5 (1-151)||(3398228-3398379)
chr5 (9-151)||(4047429-4047571)
chr5 (1-151)||(11636740-11636890)
chr5 (1-151)||(32020003-32020154)
chr5 (43-143)||(40166332-40166433)
chr5 (1-67)||(5958226-5958293)
chr5 (5-71)||(11375972-11376039)
chr5 (1-151)||(18841724-18841875)
chr5 (107-151)||(30893469-30893513)
chr5 (81-151)||(23995435-23995505)
chr5 (30-125)||(315380-315476)
chr5 (81-125)||(3936191-3936235)
chr5 (115-151)||(30893752-30893788)
chr5 (55-151)||(41350266-41350361)
chr5 (1-44)||(11692758-11692801)
chr5 (30-151)||(16174641-16174762)
chr5 (1-43)||(33072685-33072727)
chr5 (1-57)||(12332346-12332402)
chr5 (1-57)||(13761679-13761735)
chr5 (3-39)||(28378720-28378756)
chr5 (4-71)||(28629890-28629958)
chr5 (1-57)||(31613262-31613318)
chr5 (1-57)||(31704938-31704994)
chr5 (1-57)||(40454070-40454126)
[»] chr3 (52 HSPs)
chr3 (1-151)||(2571277-2571427)
chr3 (1-151)||(10307775-10307925)
chr3 (1-151)||(12515493-12515643)
chr3 (4-151)||(46492362-46492510)
chr3 (2-151)||(2379091-2379238)
chr3 (1-151)||(11610923-11611073)
chr3 (1-151)||(51618058-51618206)
chr3 (1-151)||(13495302-13495453)
chr3 (1-151)||(3863338-3863488)
chr3 (1-151)||(23638068-23638219)
chr3 (77-148)||(26291253-26291324)
chr3 (1-67)||(37444155-37444221)
chr3 (1-151)||(20938065-20938216)
chr3 (1-151)||(54527725-54527876)
chr3 (1-150)||(50364199-50364348)
chr3 (37-151)||(23803065-23803180)
chr3 (1-151)||(38389455-38389606)
chr3 (18-151)||(40497073-40497206)
chr3 (1-69)||(51339284-51339353)
chr3 (13-151)||(9710964-9711103)
chr3 (1-151)||(42180060-42180211)
chr3 (1-151)||(50204411-50204562)
chr3 (1-88)||(47386930-47387019)
chr3 (1-150)||(54621239-54621387)
chr3 (1-145)||(1569215-1569360)
chr3 (1-69)||(32553375-32553444)
chr3 (20-151)||(16875044-16875175)
chr3 (4-71)||(46845539-46845607)
chr3 (76-151)||(35414828-35414903)
chr3 (1-151)||(37055385-37055536)
chr3 (3-150)||(54026952-54027098)
chr3 (9-57)||(35094972-35095020)
chr3 (32-151)||(51401479-51401599)
chr3 (30-152)||(38786342-38786463)
chr3 (86-151)||(31318735-31318800)
chr3 (37-141)||(38785924-38786029)
chr3 (1-151)||(8165654-8165805)
chr3 (1-47)||(26291204-26291251)
chr3 (1-71)||(30214109-30214179)
chr3 (1-44)||(39365258-39365301)
chr3 (1-151)||(51567839-51567988)
chr3 (95-149)||(27300507-27300561)
chr3 (105-151)||(48776887-48776933)
chr3 (90-151)||(2566580-2566641)
chr3 (59-148)||(26499637-26499725)
chr3 (1-57)||(24569351-24569407)
chr3 (1-57)||(29932465-29932521)
chr3 (1-57)||(29981619-29981675)
chr3 (1-53)||(35415139-35415191)
chr3 (115-151)||(36812381-36812417)
chr3 (1-37)||(37332123-37332159)
chr3 (107-151)||(38277448-38277492)
[»] chr2 (56 HSPs)
chr2 (1-151)||(5583577-5583727)
chr2 (1-151)||(7757805-7757955)
chr2 (10-151)||(38248439-38248579)
chr2 (1-151)||(19228434-19228584)
chr2 (1-151)||(34213968-34214121)
chr2 (1-151)||(15411641-15411792)
chr2 (30-143)||(11660946-11661059)
chr2 (23-151)||(24729596-24729725)
chr2 (7-151)||(40562096-40562241)
chr2 (1-151)||(27665063-27665213)
chr2 (1-141)||(26229883-26230022)
chr2 (1-151)||(12016675-12016825)
chr2 (1-151)||(16126578-16126728)
chr2 (1-151)||(16919173-16919323)
chr2 (81-151)||(29157848-29157918)
chr2 (4-151)||(13351230-13351378)
chr2 (1-151)||(14377433-14377583)
chr2 (1-151)||(22705463-22705613)
chr2 (1-69)||(39904148-39904217)
chr2 (1-151)||(20566036-20566187)
chr2 (1-148)||(9450265-9450413)
chr2 (79-151)||(17234957-17235029)
chr2 (1-151)||(9747325-9747476)
chr2 (10-67)||(22162180-22162237)
chr2 (202-333)||(1681104-1681237)
chr2 (5-151)||(16123291-16123437)
chr2 (96-151)||(17265508-17265563)
chr2 (1-151)||(23932573-23932724)
chr2 (1-151)||(43806368-43806519)
chr2 (4-71)||(43388865-43388933)
chr2 (1-151)||(25998021-25998172)
chr2 (1-69)||(10690791-10690860)
chr2 (14-151)||(25948058-25948198)
chr2 (33-97)||(40503054-40503119)
chr2 (30-132)||(2051651-2051754)
chr2 (1-151)||(7720123-7720274)
chr2 (14-151)||(5853482-5853622)
chr2 (14-151)||(16493551-16493691)
chr2 (1-98)||(34817552-34817649)
chr2 (86-151)||(37471759-37471824)
chr2 (1-57)||(4579902-4579958)
chr2 (1-151)||(12919369-12919521)
chr2 (1-144)||(36612757-36612901)
chr2 (1-144)||(36620608-36620752)
chr2 (46-151)||(2544228-2544333)
chr2 (1-71)||(12438747-12438817)
chr2 (14-151)||(22704556-22704696)
chr2 (1-57)||(3286504-3286560)
chr2 (1-57)||(3504478-3504534)
chr2 (1-57)||(3951259-3951315)
chr2 (1-57)||(3951365-3951420)
chr2 (1-57)||(8847796-8847852)
chr2 (1-57)||(8847902-8847957)
chr2 (1-37)||(29795066-29795102)
chr2 (107-147)||(39607431-39607471)
chr2 (1-57)||(43941967-43942023)
[»] chr8 (57 HSPs)
chr8 (1-151)||(2161396-2161546)
chr8 (1-151)||(3306074-3306224)
chr8 (1-151)||(26364009-26364159)
chr8 (1-151)||(26682076-26682227)
chr8 (1-149)||(12131991-12132140)
chr8 (1-151)||(13327960-13328110)
chr8 (1-151)||(7140478-7140628)
chr8 (1-151)||(10129112-10129262)
chr8 (1-151)||(14816145-14816295)
chr8 (1-151)||(14829445-14829595)
chr8 (1-151)||(20514640-20514792)
chr8 (1-151)||(35678294-35678444)
chr8 (1-151)||(36967089-36967240)
chr8 (1-151)||(39701822-39701972)
chr8 (2-151)||(9801678-9801827)
chr8 (1-144)||(9743870-9744013)
chr8 (1-151)||(4080413-4080563)
chr8 (2-151)||(19343855-19344005)
chr8 (1-151)||(40210840-40210990)
chr8 (86-151)||(15198919-15198984)
chr8 (76-151)||(297179-297254)
chr8 (1-151)||(4084562-4084712)
chr8 (1-151)||(4102869-4103019)
chr8 (1-151)||(31812121-31812272)
chr8 (1-151)||(38843712-38843863)
chr8 (1-151)||(45005978-45006128)
chr8 (34-151)||(44091360-44091477)
chr8 (1-57)||(33514614-33514670)
chr8 (1-57)||(38527829-38527885)
chr8 (5-49)||(39703466-39703510)
chr8 (1-151)||(6818025-6818176)
chr8 (1-151)||(26834569-26834720)
chr8 (1-151)||(28014877-28015026)
chr8 (62-151)||(7393264-7393352)
chr8 (17-151)||(5573312-5573445)
chr8 (1-57)||(7750676-7750732)
chr8 (1-53)||(8284687-8284739)
chr8 (1-151)||(12189607-12189758)
chr8 (1-151)||(12434035-12434186)
chr8 (15-151)||(39024876-39025012)
chr8 (20-71)||(45516316-45516367)
chr8 (1-124)||(11117051-11117167)
chr8 (1-151)||(27874700-27874849)
chr8 (48-146)||(35583423-35583520)
chr8 (30-151)||(39430522-39430645)
chr8 (4-151)||(9580128-9580276)
chr8 (14-151)||(40226006-40226146)
chr8 (103-151)||(14961682-14961730)
chr8 (1-39)||(40716283-40716321)
chr8 (106-151)||(18567435-18567480)
chr8 (1-57)||(1203610-1203666)
chr8 (103-151)||(6141759-6141807)
chr8 (1-57)||(10543742-10543798)
chr8 (1-37)||(13496866-13496902)
chr8 (1-57)||(16586835-16586891)
chr8 (1-57)||(42781483-42781539)
chr8 (1-57)||(42781589-42781644)
[»] chr7 (43 HSPs)
chr7 (1-151)||(33342997-33343147)
chr7 (1-151)||(46290019-46290169)
chr7 (1-151)||(34270274-34270420)
chr7 (63-151)||(33072052-33072140)
chr7 (1-151)||(9331970-9332120)
chr7 (1-151)||(19889349-19889499)
chr7 (13-151)||(8091331-8091470)
chr7 (1-151)||(39757129-39757279)
chr7 (1-151)||(7170011-7170161)
chr7 (1-151)||(23982774-23982925)
chr7 (1-151)||(25709418-25709569)
chr7 (1-151)||(5909301-5909451)
chr7 (1-135)||(19868122-19868257)
chr7 (76-151)||(26300655-26300730)
chr7 (1-151)||(36548479-36548629)
chr7 (1-151)||(3561897-3562047)
chr7 (1-151)||(47457480-47457631)
chr7 (1-151)||(24462974-24463124)
chr7 (1-132)||(47120232-47120363)
chr7 (1-151)||(12085950-12086100)
chr7 (3-149)||(12650831-12650977)
chr7 (1-151)||(45501467-45501618)
chr7 (59-149)||(41572286-41572372)
chr7 (1-151)||(4969781-4969932)
chr7 (1-71)||(24250322-24250393)
chr7 (31-143)||(47707911-47708024)
chr7 (29-151)||(384449-384571)
chr7 (1-151)||(32117823-32117973)
chr7 (1-71)||(42750297-42750367)
chr7 (4-151)||(12624649-12624795)
chr7 (1-151)||(7040271-7040421)
chr7 (1-50)||(4161890-4161939)
chr7 (86-151)||(29398153-29398218)
chr7 (86-151)||(41331475-41331540)
chr7 (79-151)||(7899505-7899577)
chr7 (1-57)||(39869131-39869187)
chr7 (103-151)||(26037204-26037252)
chr7 (115-151)||(26050480-26050516)
chr7 (115-151)||(26059839-26059875)
chr7 (1-57)||(28061436-28061492)
chr7 (1-57)||(38798183-38798239)
chr7 (1-57)||(38798321-38798377)
chr7 (1-57)||(42593507-42593563)
[»] chr6 (38 HSPs)
chr6 (1-151)||(14228145-14228295)
chr6 (1-151)||(28943788-28943938)
chr6 (1-151)||(17552606-17552756)
chr6 (1-151)||(33017733-33017883)
chr6 (14-151)||(30591182-30591320)
chr6 (14-151)||(31069601-31069738)
chr6 (1-151)||(10887037-10887188)
chr6 (1-150)||(28757506-28757656)
chr6 (12-140)||(22974603-22974731)
chr6 (12-140)||(23813670-23813798)
chr6 (1-151)||(8977485-8977636)
chr6 (1-57)||(5363006-5363062)
chr6 (1-151)||(2830700-2830850)
chr6 (76-151)||(28756564-28756639)
chr6 (1-151)||(34692362-34692513)
chr6 (1-151)||(28759033-28759184)
chr6 (1-151)||(6016864-6017015)
chr6 (1-151)||(12454074-12454224)
chr6 (1-151)||(31503751-31503901)
chr6 (1-57)||(18332802-18332858)
chr6 (1-151)||(1017797-1017948)
chr6 (1-72)||(1814880-1814951)
chr6 (1-151)||(29863321-29863472)
chr6 (1-143)||(30623334-30623477)
chr6 (8-58)||(2086948-2086998)
chr6 (1-50)||(17596321-17596370)
chr6 (1-57)||(31791029-31791086)
chr6 (1-49)||(26602552-26602600)
chr6 (5-151)||(31169782-31169929)
chr6 (110-150)||(1814532-1814572)
chr6 (115-151)||(3853066-3853102)
chr6 (63-151)||(23936395-23936483)
chr6 (1-40)||(32615593-32615632)
chr6 (1-39)||(10345671-10345709)
chr6 (74-156)||(10671609-10671691)
chr6 (98-151)||(3261184-3261237)
chr6 (1-151)||(17154630-17154782)
chr6 (1-57)||(34733814-34733870)
[»] chr4 (59 HSPs)
chr4 (1-151)||(9759161-9759311)
chr4 (1-151)||(50352311-50352461)
chr4 (6-151)||(39876844-39876989)
chr4 (1-151)||(40049567-40049717)
chr4 (4-151)||(51691353-51691500)
chr4 (1-151)||(34941286-34941437)
chr4 (60-151)||(10658436-10658527)
chr4 (60-151)||(10872581-10872672)
chr4 (1-72)||(10658542-10658613)
chr4 (1-72)||(10872687-10872758)
chr4 (1-151)||(2096879-2097030)
chr4 (1-151)||(19450919-19451070)
chr4 (4-151)||(29190835-29190982)
chr4 (4-151)||(52391309-52391457)
chr4 (1-151)||(19468202-19468353)
chr4 (13-142)||(13009783-13009913)
chr4 (1-151)||(24684844-24684996)
chr4 (1-151)||(17409832-17409983)
chr4 (4-151)||(49181083-49181231)
chr4 (1-151)||(8736830-8736980)
chr4 (1-69)||(36000040-36000109)
chr4 (1-57)||(49228365-49228421)
chr4 (1-151)||(7349697-7349847)
chr4 (1-151)||(16667403-16667554)
chr4 (1-151)||(23545484-23545635)
chr4 (1-151)||(54495656-54495807)
chr4 (1-69)||(23553578-23553648)
chr4 (55-151)||(55813927-55814023)
chr4 (1-151)||(10389287-10389437)
chr4 (5-151)||(27019272-27019419)
chr4 (7-70)||(10813594-10813658)
chr4 (8-151)||(27362406-27362550)
chr4 (115-151)||(40682555-40682591)
chr4 (1-57)||(49332341-49332397)
chr4 (40-151)||(1378066-1378177)
chr4 (5-143)||(27756574-27756712)
chr4 (1-40)||(48910965-48911004)
chr4 (1-151)||(19838710-19838859)
chr4 (1-43)||(36968296-36968338)
chr4 (86-151)||(18882286-18882351)
chr4 (4-57)||(40681960-40682013)
chr4 (5-69)||(49650223-49650288)
chr4 (24-151)||(41415576-41415703)
chr4 (20-151)||(53961350-53961481)
chr4 (5-151)||(47326911-47327058)
chr4 (5-151)||(47341707-47341854)
chr4 (25-69)||(48910902-48910947)
chr4 (76-141)||(51070425-51070490)
chr4 (1-100)||(6875509-6875609)
chr4 (115-151)||(23051401-23051437)
chr4 (115-151)||(23438278-23438314)
chr4 (1-57)||(25843299-25843355)
chr4 (111-151)||(32279190-32279230)
chr4 (1-57)||(32459340-32459396)
chr4 (116-144)||(36971398-36971426)
chr4 (115-151)||(41488737-41488773)
chr4 (1-57)||(41887577-41887632)
chr4 (1-57)||(41887682-41887738)
chr4 (103-151)||(49228765-49228813)
[»] chr1 (50 HSPs)
chr1 (1-151)||(1502739-1502889)
chr1 (1-151)||(23576433-23576583)
chr1 (4-140)||(3121130-3121266)
chr1 (1-151)||(23591706-23591857)
chr1 (9-151)||(36490795-36490938)
chr1 (1-151)||(44918033-44918183)
chr1 (1-151)||(313758-313908)
chr1 (1-151)||(39150346-39150496)
chr1 (4-151)||(47355397-47355544)
chr1 (1-151)||(6754480-6754630)
chr1 (1-151)||(17919462-17919612)
chr1 (1-151)||(41624838-41624988)
chr1 (4-151)||(7520016-7520164)
chr1 (4-151)||(25465170-25465317)
chr1 (1-70)||(51382380-51382450)
chr1 (1-69)||(8062213-8062282)
chr1 (1-151)||(30171887-30172038)
chr1 (1-151)||(30187428-30187579)
chr1 (3-151)||(22167345-22167494)
chr1 (14-151)||(30363014-30363152)
chr1 (1-136)||(34050317-34050453)
chr1 (1-151)||(29635767-29635918)
chr1 (1-57)||(34801976-34802032)
chr1 (1-151)||(6180194-6180345)
chr1 (1-151)||(6307511-6307661)
chr1 (1-151)||(13321884-13322035)
chr1 (37-145)||(19277832-19277934)
chr1 (1-151)||(35512733-35512884)
chr1 (1-151)||(38812748-38812899)
chr1 (1-71)||(43317498-43317568)
chr1 (86-151)||(1366141-1366206)
chr1 (1-69)||(32716263-32716332)
chr1 (1-151)||(23378521-23378674)
chr1 (1-138)||(39627603-39627741)
chr1 (60-150)||(52337834-52337924)
chr1 (62-151)||(9516651-9516740)
chr1 (1-53)||(36578340-36578392)
chr1 (1-41)||(38539095-38539135)
chr1 (1-41)||(38561313-38561353)
chr1 (1-71)||(22331631-22331702)
chr1 (86-145)||(51467547-51467606)
chr1 (105-151)||(32201737-32201783)
chr1 (86-151)||(6570004-6570069)
chr1 (3-71)||(11744927-11744996)
chr1 (4-57)||(40799372-40799425)
chr1 (1-57)||(9661905-9661961)
chr1 (115-151)||(13241880-13241916)
chr1 (103-151)||(28016291-28016339)
chr1 (1-57)||(42589181-42589237)
chr1 (1-57)||(44012934-44012990)
[»] scaffold0061 (1 HSPs)
scaffold0061 (1-151)||(52798-52948)
[»] scaffold0017 (1 HSPs)
scaffold0017 (1-151)||(145686-145836)
[»] scaffold0036 (1 HSPs)
scaffold0036 (1-151)||(94037-94188)
[»] scaffold0011 (1 HSPs)
scaffold0011 (1-151)||(13094-13244)
[»] scaffold0111 (1 HSPs)
scaffold0111 (1-151)||(37133-37284)
[»] scaffold0727 (1 HSPs)
scaffold0727 (1-69)||(5699-5769)
[»] scaffold0618 (1 HSPs)
scaffold0618 (34-151)||(8433-8550)
[»] scaffold0305 (2 HSPs)
scaffold0305 (14-151)||(17807-17946)
scaffold0305 (14-151)||(18015-18153)
[»] scaffold0229 (1 HSPs)
scaffold0229 (86-151)||(24546-24611)
[»] scaffold0155 (1 HSPs)
scaffold0155 (12-151)||(3432-3572)
[»] scaffold0073 (1 HSPs)
scaffold0073 (1-151)||(16554-16704)
[»] scaffold0009 (1 HSPs)
scaffold0009 (8-98)||(43479-43568)
[»] scaffold0192 (1 HSPs)
scaffold0192 (103-151)||(13582-13630)
[»] scaffold0631 (1 HSPs)
scaffold0631 (1-43)||(450-492)
[»] scaffold0128 (1 HSPs)
scaffold0128 (90-151)||(44313-44374)
[»] scaffold0129 (1 HSPs)
scaffold0129 (1-132)||(13696-13828)
[»] scaffold0018 (1 HSPs)
scaffold0018 (28-151)||(182079-182201)


Alignment Details
Target: chr5 (Bit Score: 131; Significance: 7e-68; HSPs: 44)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 131; E-Value: 7e-68
Query Start/End: Original strand, 1 - 151
Target Start/End: Original strand, 30839790 - 30839940
Alignment:
Q  1 aacatgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattgaaatcaacaattatttaacagaaagttatacatttaatacaaaata 100  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||| ||||||||| ||||||||||||||     
T  30839790 aacatgtgcaatattgcacatgttaaggtaactaaaagtagcaagtttttattgaaaccaacaattatttaacaaaaagttatatatttaatacaaaatg 30839889  T
Q  101 ttcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaat 151  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30839890 ttcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaat 30839940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 1 - 151
Target Start/End: Original strand, 36597588 - 36597738
Alignment:
Q  1 aacatgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattgaaatcaacaattatttaacagaaagttatacatttaatacaaaata 100  Q
    ||||||||||||||||||||||||||||||||||||||||| || |||||||||||| |||||||||||||||| ||||||||| ||||||||||||||     
T  36597588 aacatgtgcaatattgcacatgttaaggtaactaaaagtagcaaatttttattgaaaccaacaattatttaacaaaaagttatatatttaatacaaaatg 36597687  T
Q  101 ttcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaat 151  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36597688 ttcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaat 36597738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 1 - 151
Target Start/End: Original strand, 40512960 - 40513110
Alignment:
Q  1 aacatgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattgaaatcaacaattatttaacagaaagttatacatttaatacaaaata 100  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||| |||| ||||||||||    
T  40512960 aacatgtgcaatattgcacatgttaaggtaactagaagtagtaagtttttattgaaatcaacaattatttaacaaaaagttatatatttgatacaaaata 40513059  T
Q  101 ttcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaat 151  Q
    ||||| ||||||||||||||||||||||||||||| |||||||||||||||    
T  40513060 ttcaaattccaatgcaaagttactattttaaattttttaacatgtgcaaat 40513110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 160 - 326
Target Start/End: Complemental strand, 41791765 - 41791599
Alignment:
Q  160 atataaataatacactttgttgtctttatcatcactttaaagtacataatcataaatgaaaggttcctgaaatttggaaaaaataaataaattttgggtg 259  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||| | |  |   ||||||||     
T  41791765 atataaataatacactttgttgtctttatcatcactttaaattacataatcataaatgaaaggttcctgaactttggaaaaga-attttttttttgggtt 41791667  T
Q  260 caaatacaatttttaaatgacatcttttggaatatctcctatcataaggtata-tttcacatttattt 326  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  41791666 caaatacaatatttaaatgacatcttttggaatatctcctatcataaggtatattttcacatttattt 41791599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 20 - 151
Target Start/End: Original strand, 6863584 - 6863715
Alignment:
Q  20 atgttaaggtaactaaaagtagtaagtttttattgaaatcaacaattatttaacagaaagttatacatttaatacaaaatattcaagttccaatgcaaag 119  Q
    |||||||||||||||||||||| ||||||||||||||| |||||||||||||| | ||||||||| |||||||||||||| |||||||||||||  ||||    
T  6863584 atgttaaggtaactaaaagtagcaagtttttattgaaaccaacaattatttaataaaaagttatatatttaatacaaaatgttcaagttccaatataaag 6863683  T
Q  120 ttactattttaaatttcttaacatgtgcaaat 151  Q
    |||||||||||||||| |||||||||||||||    
T  6863684 ttactattttaaattttttaacatgtgcaaat 6863715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 1 - 151
Target Start/End: Original strand, 2795532 - 2795682
Alignment:
Q  1 aacatgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattg-aaatcaacaattatttaacagaaagttatacatttaatacaaaat 99  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||| |||| ||| ||||||||||| |  | ||||||| | |||||||||||||     
T  2795532 aacatgtgcaatattgcacatgttaaggtaactaaaagtagtaacttttcattgaaaaccaacaattattgatta-aaagttacatatttaatacaaaaa 2795630  T
Q  100 attcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaat 151  Q
    |  ||||||||||  ||||||||||| |||||| ||||||||||||||||||    
T  2795631 acacaagttccaagtcaaagttactactttaaacttcttaacatgtgcaaat 2795682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 151
Target Start/End: Complemental strand, 8103749 - 8103599
Alignment:
Q  1 aacatgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattgaaatcaacaattatttaacagaaagttatacatttaatacaaaata 100  Q
    |||||||||||||||||||||||||||| |||||||| |||||| |||||||||||| ||||||||| |||  | |||  || | | |||||| |||||     
T  8103749 aacatgtgcaatattgcacatgttaaggcaactaaaaatagtaactttttattgaaaccaacaattaattattaaaaatctacataattaatataaaatg 8103650  T
Q  101 ttcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaat 151  Q
      ||||||||||  ||||||||||| |||||| |||||| |||||||||||    
T  8103649 cacaagttccaagtcaaagttactactttaaacttcttatcatgtgcaaat 8103599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 1 - 149
Target Start/End: Complemental strand, 10665134 - 10664986
Alignment:
Q  1 aacatgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattgaaatcaacaattatttaacagaaagttatacatttaatacaaaata 100  Q
    |||||||| ||||||||||||||||||||||||||||||| ||| |||| |||||||  |  |||||||||  | ||||||||| ||||||||   ||||    
T  10665134 aacatgtgtaatattgcacatgttaaggtaactaaaagtaataacttttcattgaaaatattaattatttattaaaaagttataaatttaatatgcaata 10665035  T
Q  101 ttcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaa 149  Q
      ||||||||||  |||| |||| |||||||||||||||| ||||||||    
T  10665034 cacaagttccaagacaaacttaccattttaaatttcttaagatgtgcaa 10664986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 1 - 151
Target Start/End: Complemental strand, 24014857 - 24014707
Alignment:
Q  1 aacatgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattgaaatcaacaattatttaacagaaagttatacatttaatacaaaata 100  Q
    ||||||||||| ||||||||||||||   |||||||||||  ||||||||||| ||| | |  | |||||| || |||| |||| |||||||||||||||    
T  24014857 aacatgtgcaacattgcacatgttaaaacaactaaaagtataaagtttttattcaaaactaataatatttaccaaaaagatatatatttaatacaaaata 24014758  T
Q  101 ttcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaat 151  Q
    | |||||| |||||  |||||||||||| ||| || |||||||||||||||    
T  24014757 tacaagtttcaatgtgaagttactatttaaaactttttaacatgtgcaaat 24014707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 189 - 337
Target Start/End: Complemental strand, 41780321 - 41780169
Alignment:
Q  189 catcactttaaagtacataatcataaatgaaaggttcctgaaatttggaaaa-aataaataaa-----ttttgggtgcaaatacaatttttaaatgacat 282  Q
    |||||||||||| |||||||||||||||||||||||||| || || |||||| || ||||||      |||| ||| |  ||||||| ||||||||||||    
T  41780321 catcactttaaaatacataatcataaatgaaaggttcctcaagttaggaaaagaaaaaataataaccttttttggtacccatacaatatttaaatgacat 41780222  T
Q  283 cttttggaatatctcctatcataaggtatatttcacatttatttttctagcttct 337  Q
    ||||||||||||   |||||||||||||||||| ||||||||| || ||||||||    
T  41780221 cttttggaatatt--ctatcataaggtatattttacatttattattttagcttct 41780169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 131
Target Start/End: Complemental strand, 11250126 - 11249996
Alignment:
Q  1 aacatgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattgaaatcaacaattatttaacagaaagttatacatttaatacaaaata 100  Q
    |||||||||||||||||||||||||| | |||||||||||| ||||||| ||   || |||||||||||||  |  || |||||  |||||||||||||     
T  11250126 aacatgtgcaatattgcacatgttaaagcaactaaaagtagcaagttttaatgataaacaacaattatttagtaataaattatatgtttaatacaaaatg 11250027  T
Q  101 ttcaagttccaatgcaaagttactattttaa 131  Q
    | || ||| ||||||||||||||||||||||    
T  11250026 tacatgtttcaatgcaaagttactattttaa 11249996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 151
Target Start/End: Original strand, 35469561 - 35469713
Alignment:
Q  1 aacatgtgcaatattgcacatgttaaggtaactaaaagtagtaagttttt-attgaaat-caacaattatttaacagaaagttatacatttaatacaaaa 98  Q
    |||||||| | || |||||||||||| |||||||||||||| || ||||| |||||||  ||||||| | |||| | ||||||||| |||||||| ||||    
T  35469561 aacatgtgaattagtgcacatgttaaagtaactaaaagtagcaatttttttattgaaaaacaacaatcaattaagaaaaagttatatatttaatataaaa 35469660  T
Q  99 tattcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaat 151  Q
    ||  | |||||||||  ||  |||||||||||||||| |||||||||||||||    
T  35469661 taaactagttccaataaaagcttactattttaaattttttaacatgtgcaaat 35469713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 1 - 151
Target Start/End: Complemental strand, 30328496 - 30328346
Alignment:
Q  1 aacatgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttatt-gaaatcaacaattatttaacagaaagttatacatttaatacaaaat 99  Q
    ||||||||||||||||||||||||||| |||||||||||||| | |||| |||  ||| ||||||||||| |  | |||| || | |||||||| ||||     
T  30328496 aacatgtgcaatattgcacatgttaagataactaaaagtagtcatttttcattaaaaaccaacaattattgatta-aaagctacatatttaatataaaaa 30328398  T
Q  100 attcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaat 151  Q
    |  ||||||||||   |||||||||| |||||| ||||||||||||||||||    
T  30328397 acacaagttccaagttaaagttactactttaaacttcttaacatgtgcaaat 30328346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 1 - 151
Target Start/End: Original strand, 34578020 - 34578170
Alignment:
Q  1 aacatgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattg-aaatcaacaattatttaacagaaagttatacatttaatacaaaat 99  Q
    ||||||||||||||| |||||||||||||||||||||||| ||| |||| |||| |||||||||||| || |  | |||| || | |||||||| ||||     
T  34578020 aacatgtgcaatattccacatgttaaggtaactaaaagtaataatttttcattgaaaatcaacaattgttgatta-aaagctacatatttaatataaaaa 34578118  T
Q  100 attcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaat 151  Q
    || ||||||  ||   ||||||||||||||||| || |||||||||||||||    
T  34578119 atacaagttttaagttaaagttactattttaaactttttaacatgtgcaaat 34578170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 160 - 328
Target Start/End: Complemental strand, 41786915 - 41786739
Alignment:
Q  160 atataaataatacactttg-ttgtctttatcatcactttaaagtacata----atcataaatgaaaggttcctgaaatttggaaaa-aataaataaa--- 250  Q
    ||||||||||||| ||| | ||||||| |||||||||||||||||||||    ||||||||||||||||||||||| || |||||| || ||||||        
T  41786915 atataaataatactcttcggttgtctt-atcatcactttaaagtacatatataatcataaatgaaaggttcctgaagttaggaaaagaaaaaataataac 41786817  T
Q  251 --ttttgggtgcaaatacaatttttaaatgacatcttttggaatatctcctatcataaggtatatttcacatttattttt 328  Q
      ||||||||    ||||||| |||| ||||||||||||| |||||   |||||||||||||||||||||||||||||||    
T  41786816 ttttttgggtatccatacaatatttagatgacatcttttgaaatatt--ctatcataaggtatatttcacatttattttt 41786739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 1 - 151
Target Start/End: Complemental strand, 31366121 - 31365969
Alignment:
Q  1 aacatgtgcaatattgcacatgttaaggtaactaaaagtagtaa--gtttttattg-aaatcaacaattatttaacagaaagttatacatttaatacaaa 97  Q
    |||||||||||||||||||||||||||||| ||||| |||||||   ||||||||| ||| ||||||||||| |  | || |||| | |||||||| |||    
T  31366121 aacatgtgcaatattgcacatgttaaggtagctaaatgtagtaactttttttattgaaaaccaacaattattgatta-aatgttacatatttaatataaa 31366023  T
Q  98 atattcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaat 151  Q
    | |  ||||||||||  ||||||||||| |||||| |||||||||||| |||||    
T  31366022 aaacacaagttccaagtcaaagttactaatttaaacttcttaacatgtacaaat 31365969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 1 - 148
Target Start/End: Original strand, 9184216 - 9184363
Alignment:
Q  1 aacatgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattg-aaatcaacaattatttaacagaaagttatacatttaatacaaaat 99  Q
    |||||||| ||||||||||||||||||||||||||||||||||| |||| |||| ||| ||| ||||||| |  | |||  || | |||||||| ||||     
T  9184216 aacatgtgtaatattgcacatgttaaggtaactaaaagtagtaacttttcattgaaaaccaataattattgatta-aaaactacatatttaatataaaaa 9184314  T
Q  100 attcaagttccaatgcaaagttactattttaaatttcttaacatgtgca 148  Q
    |  ||||||||||   |||||||||| |||||| |||||||||||||||    
T  9184315 acacaagttccaagttaaagttactactttaaacttcttaacatgtgca 9184363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 1 - 151
Target Start/End: Complemental strand, 12642162 - 12642012
Alignment:
Q  1 aacatgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattg-aaatcaacaattat--ttaacagaaagttatacatttaatacaaa 97  Q
    |||||||||||||||| ||||||||||| ||||||||||||||| |||| |||| ||| ||||||||||  || |   || |||| | |||||||| |||    
T  12642162 aacatgtgcaatattgtacatgttaaggcaactaaaagtagtaatttttcattgaaaaccaacaattatcgttta---aatgttacatatttaatataaa 12642066  T
Q  98 atattcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaat 151  Q
    | |  ||||||||||  |||||||| || |||||| ||||||||||||||||||    
T  12642065 aaacacaagttccaaatcaaagttattaatttaaacttcttaacatgtgcaaat 12642012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 1 - 151
Target Start/End: Original strand, 15190881 - 15191032
Alignment:
Q  1 aacatgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattgaaatc-aacaattatttaacagaaagttatacatttaata-caaaa 98  Q
    |||||||||||||||||| |||||||||||| |||||||||||| |||| ||||||| | |||||||||| |  | ||||||| | ||||||||  ||||    
T  15190881 aacatgtgcaatattgcatatgttaaggtaagtaaaagtagtaatttttcattgaaaacaaacaattattgatta-aaagttacatatttaatataaaaa 15190979  T
Q  99 tattcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaat 151  Q
     |  |||||| |||  |||| |||||| |||||| ||||||||||||||||||    
T  15190980 aacacaagtttcaagtcaaaattactactttaaacttcttaacatgtgcaaat 15191032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 34 - 144
Target Start/End: Original strand, 18150454 - 18150566
Alignment:
Q  34 aaaagtagtaa-gtttttattgaa-atcaacaattatttaacagaaagttatacatttaatacaaaatattcaagttccaatgcaaagttactattttaa 131  Q
    ||||||||||| |||||||||||| | || ||||||||||  | || |||||| |||||||||||||||| ||||||| || ||||| ||||||||||||    
T  18150454 aaaagtagtaaagtttttattgaataacaccaattatttattaaaatgttatatatttaatacaaaatatacaagttctaacgcaaaattactattttaa 18150553  T
Q  132 atttcttaacatg 144  Q
    | |||||||||||    
T  18150554 acttcttaacatg 18150566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 151
Target Start/End: Original strand, 3398228 - 3398379
Alignment:
Q  1 aacatgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattg-aaatcaacaattatttaacagaaagttatacatttaatacaaaat 99  Q
    ||||||||||| ||||||||||||||   |||||| |||||||| ||||| ||| ||| | | |||||||||    |||||| || ||||||||  ||||    
T  3398228 aacatgtgcaacattgcacatgttaaaacaactaatagtagtaactttttcttggaaaactataattatttatttaaaagttttatatttaatattaaat 3398327  T
Q  100 attcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaat 151  Q
     | ||||||||||| |||| || |||||||||| ||||||||||||||||||    
T  3398328 gtacaagttccaatacaaaatttctattttaaacttcttaacatgtgcaaat 3398379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 9 - 151
Target Start/End: Original strand, 4047429 - 4047571
Alignment:
Q  9 caatattgcacatgttaaggtaactaaaagtagtaagtttttattg-aaatcaacaattatttaacagaaagttatacatttaatacaaaatattcaagt 107  Q
    |||||||||| ||||||||||||||||||||||||| |||| |||| ||| |||||||| || |  | |||| || | |||||||| |||| |  |||||    
T  4047429 caatattgcatatgttaaggtaactaaaagtagtaacttttcattgaaaaccaacaattgttgatta-aaagctacatatttaatataaaaaacacaagt 4047527  T
Q  108 tccaatgcaaagttactattttaaatttcttaacatgtgcaaat 151  Q
    |||||   |||||||||| |||||| ||||||||||||||||||    
T  4047528 tccaagttaaagttactactttaaacttcttaacatgtgcaaat 4047571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 151
Target Start/End: Original strand, 11636740 - 11636890
Alignment:
Q  1 aacatgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattg-aaatcaacaattatttaacagaaagttatacatttaatacaaaat 99  Q
    |||||||||||||||||||||||||| | ||||||||||||||| |||| |||| ||| ||||||||| |||  | ||| ||| | ||||||||  ||||    
T  11636740 aacatgtgcaatattgcacatgttaaagaaactaaaagtagtaacttttcattgaaaaccaacaattaattattaaaaatttacatatttaata-taaat 11636838  T
Q  100 attcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaat 151  Q
       |||||| |||  ||||||||||| |||||| |||||| |||||||||||    
T  11636839 gcacaagtttcaagtcaaagttactactttaaacttcttatcatgtgcaaat 11636890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 151
Target Start/End: Complemental strand, 32020154 - 32020003
Alignment:
Q  1 aacatgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattgaaat-caacaattatttaacagaaagttatacatttaatacaaaat 99  Q
    ||||||||||||||||||| |||||||| |||||||  |||||| ||||  ||||||  || | ||||||    | ||||||||  |||||||| | |||    
T  32020154 aacatgtgcaatattgcacttgttaaggaaactaaatctagtaacttttctttgaaaaacaccgattattattaaaaaagttatctatttaatatagaat 32020055  T
Q  100 attcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaat 151  Q
    |  ||||||||||  |||| |||| |||||||||||||||||||||||||||    
T  32020054 acacaagttccaagacaaacttaccattttaaatttcttaacatgtgcaaat 32020003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 43 - 143
Target Start/End: Original strand, 40166332 - 40166433
Alignment:
Q  43 aagtttttattgaaat-caacaattatttaacagaaagttatacatttaatacaaaatattcaagttccaatgcaaagttactattttaaatttcttaac 141  Q
    |||||||||||||||  ||||||||||||| || ||||||||| |||||||||||||| | |||||| |||| || |||| ||| |||| |||| |||||    
T  40166332 aagtttttattgaaaaacaacaattatttatcaaaaagttatatatttaatacaaaatgtacaagtttcaatacatagttgctaatttagatttattaac 40166431  T
Q  142 at 143  Q
    ||    
T  40166432 at 40166433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 5958293 - 5958226
Alignment:
Q  1 aacatgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattg-aaatcaacaatta 67  Q
    ||||||||||||||| |||||||||| | ||||||||||||||| |||| |||| |||||||||||||    
T  5958293 aacatgtgcaatattacacatgttaaagaaactaaaagtagtaatttttcattgaaaatcaacaatta 5958226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 5 - 71
Target Start/End: Original strand, 11375972 - 11376039
Alignment:
Q  5 tgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattg-aaatcaacaattattta 71  Q
    |||||||||||||||||||||| | ||||||||||||||| |||| |||| ||||||| |||||||||    
T  11375972 tgtgcaatattgcacatgttaaagcaactaaaagtagtaacttttcattgaaaatcaataattattta 11376039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 151
Target Start/End: Complemental strand, 18841875 - 18841724
Alignment:
Q  1 aacatgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttatt-gaaatcaacaattatttaacagaaagttatacatttaatacaaaat 99  Q
    ||||||||||| ||||||||||||||   |||||| |||||||| ||||| || |||| |||||||||||||    |||||| || ||||||||  ||||    
T  18841875 aacatgtgcaacattgcacatgttaaaacaactaatagtagtaacttttttttggaaaacaacaattatttattcaaaagttttatatttaatattaaat 18841776  T
Q  100 attcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaat 151  Q
     | ||| || |||| |||| || |||||||||| || ||||||| |||||||    
T  18841775 gtacaaatttcaatacaaaatttctattttaaactttttaacatatgcaaat 18841724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 107 - 151
Target Start/End: Original strand, 30893469 - 30893513
Alignment:
Q  107 ttccaatgcaaagttactattttaaatttcttaacatgtgcaaat 151  Q
    |||||||||||||||||||||||||| ||||||||||||| ||||    
T  30893469 ttccaatgcaaagttactattttaaacttcttaacatgtgaaaat 30893513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 81 - 151
Target Start/End: Complemental strand, 23995505 - 23995435
Alignment:
Q  81 tatacatttaatacaaaatattcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaat 151  Q
    |||| |||||||||||||| | |||||| ||||  ||| ||||||||||||| |||||||||||| |||||    
T  23995505 tatatatttaatacaaaatgtacaagtttcaatataaaattactattttaaacttcttaacatgtacaaat 23995435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 30 - 125
Target Start/End: Original strand, 315380 - 315476
Alignment:
Q  30 aactaaaagtagtaagtttttattgaaa-tcaacaattatttaacagaaagttatacatttaatacaaaatattcaagttccaatgcaaagttacta 125  Q
    |||||||| |||||| |||| ||||||| || | || ||||||  | ||||||||  ||||||| |||||| | |||||||||||||||||||||||    
T  315380 aactaaaaatagtaatttttgattgaaaatccataaatatttattaaaaagttatgtatttaatgcaaaatgtacaagttccaatgcaaagttacta 315476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 81 - 125
Target Start/End: Original strand, 3936191 - 3936235
Alignment:
Q  81 tatacatttaatacaaaatattcaagttccaatgcaaagttacta 125  Q
    ||||||||||||||||||||| |||||||||| ||||| ||||||    
T  3936191 tatacatttaatacaaaatatgcaagttccaacgcaaaattacta 3936235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 115 - 151
Target Start/End: Original strand, 30893752 - 30893788
Alignment:
Q  115 caaagttactattttaaatttcttaacatgtgcaaat 151  Q
    |||||||||||||||||| ||||||||||||||||||    
T  30893752 caaagttactattttaaacttcttaacatgtgcaaat 30893788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 55 - 151
Target Start/End: Original strand, 41350266 - 41350361
Alignment:
Q  55 aaatcaacaattatttaacagaaagttatacatttaatacaaaatattcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaat 151  Q
    |||||||||||||||||  | ||||||| | |||||||| ||||    ||||||||||  |||| |||||| |||||| ||||||||||||||||||    
T  41350266 aaatcaacaattatttatta-aaagttacatatttaatataaaaagcacaagttccaagtcaaaattactactttaaacttcttaacatgtgcaaat 41350361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 11692801 - 11692758
Alignment:
Q  1 aacatgtgcaatattgcacatgttaaggtaactaaaagtagtaa 44  Q
    ||||||| ||||||||||||||||||  ||||||||||||||||    
T  11692801 aacatgtacaatattgcacatgttaaaataactaaaagtagtaa 11692758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 30 - 151
Target Start/End: Complemental strand, 16174762 - 16174641
Alignment:
Q  30 aactaaaagtagtaagtttttattgaaatc-aacaattatttaacagaaagttatacatttaatacaaaatattcaagttccaatgcaaagttactattt 128  Q
    ||||||||||||||| |||| ||||||| | |||||||| |||  | ||| ||| | |||||||| ||| |   |||||| |||| ||||||||||| ||    
T  16174762 aactaaaagtagtaacttttcattgaaaaccaacaattaattattaaaaacttacatatttaatataaa-tgcacaagtttcaattcaaagttactactt 16174664  T
Q  129 taaatttcttaacatgtgcaaat 151  Q
    |||||||||||  ||||||||||    
T  16174663 taaatttcttatgatgtgcaaat 16174641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 33072685 - 33072727
Alignment:
Q  1 aacatgtgcaatattgcacatgttaaggtaactaaaagtagta 43  Q
    ||||||||||||||||||||||||||   ||||||||||||||    
T  33072685 aacatgtgcaatattgcacatgttaaatcaactaaaagtagta 33072727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 12332346 - 12332402
Alignment:
Q  1 aacatgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattgaaa 57  Q
    |||||||||||  |||||||||||||||  |||||||| || || ||||||||||||    
T  12332346 aacatgtgcaaatttgcacatgttaaggatactaaaagaagcaactttttattgaaa 12332402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 13761679 - 13761735
Alignment:
Q  1 aacatgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattgaaa 57  Q
    |||||||||||  |||||||||||||||  |||||||| || || ||||||||||||    
T  13761679 aacatgtgcaaatttgcacatgttaaggatactaaaagaagcaactttttattgaaa 13761735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 3 - 39
Target Start/End: Original strand, 28378720 - 28378756
Alignment:
Q  3 catgtgcaatattgcacatgttaaggtaactaaaagt 39  Q
    |||||||||||||||||||||||| |||| |||||||    
T  28378720 catgtgcaatattgcacatgttaaagtaattaaaagt 28378756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 4 - 71
Target Start/End: Original strand, 28629890 - 28629958
Alignment:
Q  4 atgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattg-aaatcaacaattattta 71  Q
    |||| |||||||||||||||||| | |||||||| || ||| |||| |||| ||| |||||||||||||    
T  28629890 atgtacaatattgcacatgttaaagcaactaaaaataataacttttcattgaaaaccaacaattattta 28629958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 31613318 - 31613262
Alignment:
Q  1 aacatgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattgaaa 57  Q
    |||||||||||  |||||||||||||||  |||||||| || || ||||||||||||    
T  31613318 aacatgtgcaaatttgcacatgttaaggatactaaaagaagcaactttttattgaaa 31613262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 31704938 - 31704994
Alignment:
Q  1 aacatgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattgaaa 57  Q
    |||||||||||  |||||||||||||||  |||||||| || || ||||||||||||    
T  31704938 aacatgtgcaaatttgcacatgttaaggatactaaaagaagcaactttttattgaaa 31704994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 40454070 - 40454126
Alignment:
Q  1 aacatgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattgaaa 57  Q
    |||||||||||  |||||||||||||||  |||||||| || || ||||||||||||    
T  40454070 aacatgtgcaaatttgcacatgttaaggatactaaaagaagcaactttttattgaaa 40454126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 131; Significance: 7e-68; HSPs: 52)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 131; E-Value: 7e-68
Query Start/End: Original strand, 1 - 151
Target Start/End: Original strand, 2571277 - 2571427
Alignment:
Q  1 aacatgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattgaaatcaacaattatttaacagaaagttatacatttaatacaaaata 100  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||| ||||||||| ||||||||||||||     
T  2571277 aacatgtgcaatattgcacatgttaaggtaactaaaagtagcaagtttttattgaaaccaacaattatttaacaaaaagttatatatttaatacaaaatg 2571376  T
Q  101 ttcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaat 151  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2571377 ttcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaat 2571427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 1 - 151
Target Start/End: Original strand, 10307775 - 10307925
Alignment:
Q  1 aacatgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattgaaatcaacaattatttaacagaaagttatacatttaatacaaaata 100  Q
    |||||||||||||||||||||| |||||||||||||||||| || |||||||||||| |||||||||||||||| ||||||||| ||||||||||||||     
T  10307775 aacatgtgcaatattgcacatgataaggtaactaaaagtagcaaatttttattgaaaccaacaattatttaacaaaaagttatatatttaatacaaaatg 10307874  T
Q  101 ttcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaat 151  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  10307875 ttcaagttccaatgcaaatttactattttaaatttcttaacatgtgcaaat 10307925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 1 - 151
Target Start/End: Complemental strand, 12515643 - 12515493
Alignment:
Q  1 aacatgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattgaaatcaacaattatttaacagaaagttatacatttaatacaaaata 100  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||| |||||||||||||||| ||||||||| ||||||||||||||     
T  12515643 aacatgtgcaatattgcacatgttaaggtaactaaaagtagcaagtttttattaaaaccaacaattatttaacaaaaagttatatatttaatacaaaatg 12515544  T
Q  101 ttcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaat 151  Q
    |||||||||| |||||||||||||||||||||||| |||||||||||||||    
T  12515543 ttcaagttcctatgcaaagttactattttaaattttttaacatgtgcaaat 12515493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 4 - 151
Target Start/End: Complemental strand, 46492510 - 46492362
Alignment:
Q  4 atgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattgaaat-caacaattatttaacagaaagttatacatttaatacaaaatatt 102  Q
    ||||||||||||||||||||||| | |||||||||| |||||||||||||||||  |||||||||||||  |   ||||||| |||||||||||||| |     
T  46492510 atgtgcaatattgcacatgttaaagcaactaaaagtggtaagtttttattgaaaaacaacaattatttattaacgagttatatatttaatacaaaatgta 46492411  T
Q  103 caagttccaatgcaaagttactattttaaatttcttaacatgtgcaaat 151  Q
    |||||| |||||||||||||||| ||||||||||||||| |||| ||||    
T  46492410 caagtttcaatgcaaagttactactttaaatttcttaacgtgtgaaaat 46492362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 2 - 151
Target Start/End: Complemental strand, 2379238 - 2379091
Alignment:
Q  2 acatgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattgaaatcaacaattatttaacagaaagttatacatttaatacaaaatat 101  Q
    |||||||||||||||||||||||||   |||||||||||||||||||||||||||   ||||||||||||  | ||||| ||| ||| ||||||||||||    
T  2379238 acatgtgcaatattgcacatgttaaaacaactaaaagtagtaagtttttattgaa--taacaattatttattaaaaagtcatatattaaatacaaaatat 2379141  T
Q  102 tcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaat 151  Q
     ||||||  |||||||||||| || |||||||||| ||||||||| ||||    
T  2379140 acaagttttaatgcaaagttattagtttaaatttcctaacatgtgtaaat 2379091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 1 - 151
Target Start/End: Original strand, 11610923 - 11611073
Alignment:
Q  1 aacatgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattg-aaatcaacaattatttaacagaaagttatacatttaatacaaaat 99  Q
    |||||||||||||||||||||||||||| ||||||||||||||| |||| |||| ||| |||||||||||||  | ||||||| | |||||||| ||||     
T  11610923 aacatgtgcaatattgcacatgttaaggcaactaaaagtagtaacttttcattgaaaaccaacaattatttatta-aaagttacatatttaatataaaaa 11611021  T
Q  100 attcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaat 151  Q
    |  ||||||||||  ||||||||||| |||||| |||||| |||||||||||    
T  11611022 acacaagttccaagtcaaagttactactttaaacttcttatcatgtgcaaat 11611073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 1 - 151
Target Start/End: Original strand, 51618058 - 51618206
Alignment:
Q  1 aacatgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattgaaat-caacaattatttaacagaaagttatacatttaatacaaaat 99  Q
    ||||||||||||||||||||||||||   ||||||||| || ||||||||| |||||  |||||||||||||  | ||   |||| ||||||||||||||    
T  51618058 aacatgtgcaatattgcacatgttaaaacaactaaaagcagcaagtttttactgaaaaacaacaattatttattaaaa---tatatatttaatacaaaat 51618154  T
Q  100 attcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaat 151  Q
     | ||||||||||||||||||||| |||| ||| ||||||||||||||||||    
T  51618155 gtacaagttccaatgcaaagttacaatttgaaacttcttaacatgtgcaaat 51618206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 1 - 151
Target Start/End: Original strand, 13495302 - 13495453
Alignment:
Q  1 aacatgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattg-aaatcaacaattatttaacagaaagttatacatttaatacaaaat 99  Q
    |||||||||||  ||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||  | |||  || | |||||||| |||||    
T  13495302 aacatgtgcaaatttgcacatgttaaggtaactaaaagtagtaattttttattgaaaatcaacaattatttattaaaaacctacatatttaatataaaat 13495401  T
Q  100 attcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaat 151  Q
       ||||||||||  |||| |||||| |||||| |||||| |||||||||||    
T  13495402 gcacaagttccaagtcaaaattactactttaaacttcttatcatgtgcaaat 13495453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 1 - 151
Target Start/End: Original strand, 3863338 - 3863488
Alignment:
Q  1 aacatgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattg-aaatcaacaattatttaacagaaagttatacatttaatacaaaat 99  Q
    |||||||||||||||||||||||||||||||||||| ||||||| |||| |||| |||||| |||||||| |  | |||| || | |||||||| ||||     
T  3863338 aacatgtgcaatattgcacatgttaaggtaactaaaggtagtaacttttcattgaaaatcagcaattattgatta-aaagctacatatttaatataaaaa 3863436  T
Q  100 attcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaat 151  Q
    |  ||||||||||   |||||||||| |||||| ||||||||||||||||||    
T  3863437 acacaagttccaagctaaagttactactttaaacttcttaacatgtgcaaat 3863488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 1 - 151
Target Start/End: Complemental strand, 23638219 - 23638068
Alignment:
Q  1 aacatgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattgaaat-caacaattatttaacagaaagttatacatttaatacaaaat 99  Q
    ||||||||||||||||  ||||||||| ||||| |||||||||| ||| ||||||||  || ||||||||||| | |||||| || |||||||| |||||    
T  23638219 aacatgtgcaatattgtgcatgttaagttaacttaaagtagtaactttctattgaaaaacatcaattatttaataaaaagttgtatatttaatataaaat 23638120  T
Q  100 attcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaat 151  Q
    |  |||||| |||  | || |||| |||||||||||||||||||||||||||    
T  23638119 acacaagtttcaagactaacttaccattttaaatttcttaacatgtgcaaat 23638068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 77 - 148
Target Start/End: Original strand, 26291253 - 26291324
Alignment:
Q  77 aagttatacatttaatacaaaatattcaagttccaatgcaaagttactattttaaatttcttaacatgtgca 148  Q
    |||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||    
T  26291253 aagttatatatttaatacaaaatgttcaagttccaatgcaaagttactattttaaatttcctaacatgtgca 26291324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 37444155 - 37444221
Alignment:
Q  1 aacatgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattgaaatcaacaatta 67  Q
    |||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||    
T  37444155 aacatgtgcaatattgcacatgttaaggcaactaaaagtagtaactttttattgaaatcaacaatta 37444221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 1 - 151
Target Start/End: Original strand, 20938065 - 20938216
Alignment:
Q  1 aacatgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattgaaatc-aacaattatttaacagaaagttatacatttaata-caaaa 98  Q
    |||||||||||||||||||||||||||||||||||||||| ||| |||||||||||| | |||||||||| |  | ||| ||| | ||||||||  ||||    
T  20938065 aacatgtgcaatattgcacatgttaaggtaactaaaagtaataactttttattgaaaactaacaattattgatta-aaaattacatatttaatataaaaa 20938163  T
Q  99 tattcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaat 151  Q
     |  ||||||||||  ||||||||||| |||||| |||||| |||||||||||    
T  20938164 aacacaagttccaagtcaaagttactactttaaacttcttatcatgtgcaaat 20938216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 1 - 151
Target Start/End: Complemental strand, 54527876 - 54527725
Alignment:
Q  1 aacatgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattg-aaatcaacaattatttaacagaaagttatacatttaatacaaaat 99  Q
    ||||||||||| ||||||||||||||   |||||| |||||||| ||||| ||| ||| |||||||||||||    |||||| || ||||||||  ||||    
T  54527876 aacatgtgcaacattgcacatgttaaaacaactaatagtagtaactttttcttggaaaacaacaattatttattcaaaagttttatatttaatattaaat 54527777  T
Q  100 attcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaat 151  Q
     | ||||||||||| |||| ||  ||||||||||||||||||||||||||||    
T  54527776 gtacaagttccaatacaaaatttatattttaaatttcttaacatgtgcaaat 54527725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 150
Target Start/End: Original strand, 50364199 - 50364348
Alignment:
Q  1 aacatgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattg-aaatcaacaattatttaacagaaagttatacatttaatacaaaat 99  Q
    |||||||||| |||||||||||| |||||||||||||||||||| || | |||| ||| ||||||||||| |  | ||||||| | |||||||| ||||     
T  50364199 aacatgtgcagtattgcacatgtaaaggtaactaaaagtagtaacttataattgaaaaccaacaattattgatta-aaagttacatatttaatataaaaa 50364297  T
Q  100 attcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaa 150  Q
    |  ||||||||||  ||||||||||| |||||| |||||| ||||||||||    
T  50364298 acacaagttccaagtcaaagttactactttaaacttcttagcatgtgcaaa 50364348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 37 - 151
Target Start/End: Complemental strand, 23803180 - 23803065
Alignment:
Q  37 agtagtaagtttttattgaaat-caacaattatttaacagaaagttatacatttaatacaaaatattcaagttccaatgcaaagttactattttaaattt 135  Q
    |||||||| ||||| ||||||  |||||||||||||    |||||| || ||||||||  |||||| |||||||||||||||| || |||||||||| ||    
T  23803180 agtagtaactttttcttgaaaaacaacaattatttattcaaaagttttatatttaatatgaaatatacaagttccaatgcaaaatttctattttaaactt 23803081  T
Q  136 cttaacatgtgcaaat 151  Q
    ||||||||||||||||    
T  23803080 cttaacatgtgcaaat 23803065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 151
Target Start/End: Original strand, 38389455 - 38389606
Alignment:
Q  1 aacatgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattgaaat-caacaattatttaacagaaagttatacatttaatacaaaat 99  Q
    ||||||||||| ||||||||||||||| || ||||||||||||| ||||||||||||  ||| | |||||||  | |||| || | ||||||||  ||||    
T  38389455 aacatgtgcaacattgcacatgttaagatatctaaaagtagtaattttttattgaaaaacaaaacttatttattaaaaagctacatatttaatatgaaat 38389554  T
Q  100 attcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaat 151  Q
       ||||||||||  |||| |||| | |||||| ||||||||||||||||||    
T  38389555 gcacaagttccaagtcaaaattaccactttaaacttcttaacatgtgcaaat 38389606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 18 - 151
Target Start/End: Original strand, 40497073 - 40497206
Alignment:
Q  18 acatgttaaggtaactaaaagtagtaagtttttattgaaatcaacaattatttaacagaaagttatacatttaatacaaaatattcaagttccaatgcaa 117  Q
    ||||||||||| ||||||||||||||| |||||||||||||||||||||| |||  | |||  || | | |||||| |||||   ||||||| ||   ||    
T  40497073 acatgttaaggcaactaaaagtagtaactttttattgaaatcaacaattaattattaaaaatctacatagttaatataaaatgcacaagttctaagttaa 40497172  T
Q  118 agttactattttaaatttcttaacatgtgcaaat 151  Q
    |||||||| |||||| |||||| |||||||||||    
T  40497173 agttactactttaaacttcttatcatgtgcaaat 40497206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 51339353 - 51339284
Alignment:
Q  1 aacatgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattg-aaatcaacaattatt 69  Q
    ||||||||||||||||||||||||||||||||||||| |||||| |||| |||| ||| |||||||||||    
T  51339353 aacatgtgcaatattgcacatgttaaggtaactaaaaatagtaatttttcattgaaaaccaacaattatt 51339284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 13 - 151
Target Start/End: Original strand, 9710964 - 9711103
Alignment:
Q  13 attgcacatgttaaggtaactaaaagtagtaagtttttattg-aaatcaacaattatttaacagaaagttatacatttaatacaaaatattcaagttcca 111  Q
    ||||||||||||||   |||||||| |||||||||||||||| ||| ||||||||||| |  | ||| ||||  ||| | |||||||||| |||||||||    
T  9710964 attgcacatgttaaaacaactaaaactagtaagtttttattgaaaaacaacaattattaattaaaaatttatgtattaattacaaaatatacaagttcca 9711063  T
Q  112 atgcaaagttactattttaaatttcttaacatgtgcaaat 151  Q
    |||| ||  || |||||| || |||||||||| |||||||    
T  9711064 atgcgaatgtattattttgaacttcttaacatatgcaaat 9711103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 151
Target Start/End: Original strand, 42180060 - 42180211
Alignment:
Q  1 aacatgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattg-aaatcaacaattatttaacagaaagttatacatttaatacaaaat 99  Q
    ||||||||||| ||||||||||||||   |||||| |||||||| ||||| ||| ||| | | |||||||||    |||||| || ||||||||  ||||    
T  42180060 aacatgtgcaacattgcacatgttaaaacaactaatagtagtaactttttcttggaaaactataattatttatttaaaagttttatatttaatattaaat 42180159  T
Q  100 attcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaat 151  Q
     | ||||||||||| |||| ||  ||||||||| ||||||||||||||||||    
T  42180160 gtacaagttccaatacaaaatttttattttaaacttcttaacatgtgcaaat 42180211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 151
Target Start/End: Original strand, 50204411 - 50204562
Alignment:
Q  1 aacatgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattg-aaatcaacaattatttaacagaaagttatacatttaatacaaaat 99  Q
    ||||||||||| ||||||||||||||   |||||| |||||||| ||||| ||| |||  ||||||||| ||    |||||| || ||||||||  ||||    
T  50204411 aacatgtgcaacattgcacatgttaaaacaactaatagtagtaattttttcttggaaaataacaattatatattcaaaagttttatatttaatattaaat 50204510  T
Q  100 attcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaat 151  Q
     | || |||||||| |||| || |||||||||| ||||||||||||||||||    
T  50204511 gtacaggttccaatacaaaatttctattttaaacttcttaacatgtgcaaat 50204562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 47386930 - 47387019
Alignment:
Q  1 aacatgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattg--aaatcaacaattatttaacagaaagttatacatt 88  Q
    ||||||||||||||||| ||| |||| | |||||||||||||||||||||||||  |||  ||||||||||||  | |||||||||||||    
T  47386930 aacatgtgcaatattgcgcatattaaagcaactaaaagtagtaagtttttattgaaaaaaaaacaattatttattaaaaagttatacatt 47387019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 150
Target Start/End: Complemental strand, 54621387 - 54621239
Alignment:
Q  1 aacatgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttatt-gaaatcaacaattatttaacagaaagttatacatttaatacaaaat 99  Q
    |||||||||||||||||| |||||||||||| |||||||||||| |||| |||  ||| ||||||||||| |  | || |||| | |||||||| ||||     
T  54621387 aacatgtgcaatattgcatatgttaaggtaattaaaagtagtaatttttcattaaaaaccaacaattattgatta-aatgttacatatttaatataaaaa 54621289  T
Q  100 attcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaa 150  Q
    |  ||| ||||||  ||||||||||| ||||||||| |||| |||||||||    
T  54621288 acacaacttccaagtcaaagttactaatttaaattt-ttaaaatgtgcaaa 54621239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 145
Target Start/End: Complemental strand, 1569360 - 1569215
Alignment:
Q  1 aacatgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattgaaat-caacaattatttaacagaaagttatacatttaatacaaaat 99  Q
    ||||| ||||||||||||||| |||| | |||   || |||||| |||||||| |||  ||||||| |||||  ||||||||| | || ||||| |||||    
T  1569360 aacatatgcaatattgcacattttaaagcaacccgaactagtaattttttattaaaaaacaacaataatttattagaaagttacatatctaatataaaat 1569261  T
Q  100 attcaagttccaatgcaaagttactattttaaatttcttaacatgt 145  Q
       ||||||||||| |||||||| ||||||||| ||||||||||||    
T  1569260 gaacaagttccaatacaaagttattattttaaacttcttaacatgt 1569215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 32553375 - 32553444
Alignment:
Q  1 aacatgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattg-aaatcaacaattatt 69  Q
    ||||||||||||||| ||||||||||||||| |||||||||||| |||| |||| ||||||| |||||||    
T  32553375 aacatgtgcaatattacacatgttaaggtaattaaaagtagtaacttttcattgaaaatcaataattatt 32553444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 20 - 151
Target Start/End: Complemental strand, 16875175 - 16875044
Alignment:
Q  20 atgttaaggtaactaaaagtagtaagtttttattg-aaatcaacaattatttaacagaaagttatacatttaatacaaaatattcaagttccaatgcaaa 118  Q
    ||||||||||||||||||||||||| ||||||||| ||| |||||||| || |  | |||| || | |||||||| |||| |  |||||| |||   |||    
T  16875175 atgttaaggtaactaaaagtagtaattttttattgaaaaccaacaattgttgatta-aaagctacatatttaatataaaaaacacaagtttcaagttaaa 16875077  T
Q  119 gttactattttaaatttcttaacatgtgcaaat 151  Q
    ||||||| |||||| ||||||||||||||||||    
T  16875076 gttactactttaaacttcttaacatgtgcaaat 16875044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 4 - 71
Target Start/End: Complemental strand, 46845607 - 46845539
Alignment:
Q  4 atgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattg-aaatcaacaattattta 71  Q
    |||||||||||||||||| |||| | |||||||||||| || ||||||||| |||||||||||||||||    
T  46845607 atgtgcaatattgcacatcttaaagcaactaaaagtagaaattttttattgaaaatcaacaattattta 46845539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 76 - 151
Target Start/End: Complemental strand, 35414903 - 35414828
Alignment:
Q  76 aaagttatacatttaatacaaaatattcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaat 151  Q
    ||||||||| ||| |||||||||||| ||| |||||||  |||||||||||||| || ||||||||||||| ||||    
T  35414903 aaagttatatattaaatacaaaatatacaacttccaatataaagttactattttgaacttcttaacatgtgtaaat 35414828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 151
Target Start/End: Complemental strand, 37055536 - 37055385
Alignment:
Q  1 aacatgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattgaaatc-aacaattatttaacagaaagttatacatttaatacaaaat 99  Q
    ||||||| |||||||||| ||||||| | |||||||| |||||| |||  |||||||   ||||||||||||  | |||||| || | |||||| ||||     
T  37055536 aacatgtacaatattgcatatgttaaaggaactaaaaatagtaactttacattgaaaaagaacaattatttattaaaaagttttatagttaatataaaaa 37055437  T
Q  100 attcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaat 151  Q
    |  |||||||| || |||  ||||||||||||| ||||||| ||||||||||    
T  37055436 acacaagttccgatacaactttactattttaaacttcttaatatgtgcaaat 37055385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 3 - 150
Target Start/End: Complemental strand, 54027098 - 54026952
Alignment:
Q  3 catgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattgaaatcaaca---attatttaacagaaagttatacatttaatacaaaat 99  Q
    ||||||||||||||||||||||||| | |||||||| || || |||||||||||| | |||    ||||| || ||||   |||| |||||||  |||||    
T  54027098 catgtgcaatattgcacatgttaagat-actaaaagaagcaactttttattgaaaactacagttgttattaaaaagaa---tatatatttaatgtaaaat 54027003  T
Q  100 attcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaa 150  Q
    |  |||||| ||||  ||| |||||||||||||||||||||||| ||||||    
T  54027002 acacaagtttcaatataaatttactattttaaatttcttaacatttgcaaa 54026952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 9 - 57
Target Start/End: Original strand, 35094972 - 35095020
Alignment:
Q  9 caatattgcacatgttaaggtaactaaaagtagtaagtttttattgaaa 57  Q
    |||||||||||||||||||||||||||||| ||||| |||| |||||||    
T  35094972 caatattgcacatgttaaggtaactaaaagcagtaacttttcattgaaa 35095020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 32 - 151
Target Start/End: Original strand, 51401479 - 51401599
Alignment:
Q  32 ctaaaagtagtaagtttttattg-aaatcaacaattatttaacagaaagttatacatttaatacaaaatattcaagttccaatgcaaagttactatttta 130  Q
    |||| |||||||| ||||| ||| ||| |||||||||||||   |||  || || ||||||||  |||| | ||||||||||| |||| || ||||||||    
T  51401479 ctaatagtagtaacttttttttggaaaacaacaattatttatttgaattttttatatttaatattaaatgtacaagttccaatacaaaatttctatttta 51401578  T
Q  131 aatttcttaacatgtgcaaat 151  Q
    || ||||||||||||||||||    
T  51401579 aacttcttaacatgtgcaaat 51401599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 30 - 152
Target Start/End: Complemental strand, 38786463 - 38786342
Alignment:
Q  30 aactaaaagtagtaagtttttattgaaatcaacaattatttaacagaaagttatacatttaatacaaaatattcaagttccaatgcaaagttactatttt 129  Q
    |||||||| |||||| ||||||||||||  ||||||||||||  | ||| | | ||||||| || |||||   ||| || |||  |||| ||||||||||    
T  38786463 aactaaaaatagtaattttttattgaaaataacaattatttattaaaaaat-acacatttagtataaaatccacaaatttcaaatcaaaattactatttt 38786365  T
Q  130 aaatttcttaacatgtgcaaatg 152  Q
    ||| |||||||||||||||||||    
T  38786364 aaacttcttaacatgtgcaaatg 38786342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 86 - 151
Target Start/End: Original strand, 31318735 - 31318800
Alignment:
Q  86 atttaatacaaaatattcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaat 151  Q
    ||||||||  |||| | |||||||||||||||| || |||| ||||| ||||||||||||||||||    
T  31318735 atttaatattaaatgtacaagttccaatgcaaaatttctatcttaaacttcttaacatgtgcaaat 31318800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 37 - 141
Target Start/End: Original strand, 38785924 - 38786029
Alignment:
Q  37 agtagtaagtttttattgaaat-caacaattatttaacagaaagttatacatttaatacaaaatattcaagttccaatgcaaagttactattttaaattt 135  Q
    |||||||| ||||| ||||||  |||||||||||||   ||||||| || |||||||| ||||  | ||||||||||| |||| || |||||||||| ||    
T  38785924 agtagtaatttttttttgaaaaacaacaattatttatttgaaagttttatatttaatataaaacgtacaagttccaatacaaaatttctattttaaactt 38786023  T
Q  136 cttaac 141  Q
    ||||||    
T  38786024 cttaac 38786029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 151
Target Start/End: Original strand, 8165654 - 8165805
Alignment:
Q  1 aacatgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattg-aaatcaacaattattta-acagaaagttatacatttaatacaaaa 98  Q
    ||||||||||| ||||||||| ||||   |||||| | |||||| ||||| ||| ||| |||| |||||||| ||| ||||||  | | ||||||  |||    
T  8165654 aacatgtgcaacattgcacattttaaaacaactaataatagtaacttttttttggaaaacaacgattatttataca-aaagtttaagagttaatattaaa 8165752  T
Q  99 tattcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaat 151  Q
    | | ||||||||||| |||| ||  ||||||||| ||||||||||||||||||    
T  8165753 tgtacaagttccaatacaaaatttatattttaaacttcttaacatgtgcaaat 8165805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 26291204 - 26291251
Alignment:
Q  1 aacatgtgcaatattgcacatgtt-aaggtaactaaaagtagtaagtt 47  Q
    ||||||||||||||| |||||||| |||||||| ||||||||||||||    
T  26291204 aacatgtgcaatattacacatgttaaaggtaaccaaaagtagtaagtt 26291251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 30214179 - 30214109
Alignment:
Q  1 aacatgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattg-aaatcaacaattattta 71  Q
    ||||||||||||||| |||||  ||||| |||||||| |||||| |||| |||| |||||||||||||||||    
T  30214179 aacatgtgcaatattacacattctaaggcaactaaaa-tagtaacttttcattgaaaatcaacaattattta 30214109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 39365301 - 39365258
Alignment:
Q  1 aacatgtgcaatattgcacatgttaaggtaactaaaagtagtaa 44  Q
    |||||||||||||||||||||||||| |  ||||||||||||||    
T  39365301 aacatgtgcaatattgcacatgttaaagctactaaaagtagtaa 39365258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 151
Target Start/End: Complemental strand, 51567988 - 51567839
Alignment:
Q  1 aacatgtgcaatattgcacatgttaaggtaactaaaagtagtaagttttt--attgaaatcaacaattatttaacagaaagttatacatttaatacaaaa 98  Q
    |||||| |||| ||||||||||||||   |||||| |||||||| |||||   | |||| |||||||||||||    |||||| || ||||||||  |||    
T  51567988 aacatgcgcaacattgcacatgttaaaacaactaatagtagtaacttttttcttggaaaacaacaattatttattcaaaagttttatatttaatagtaaa 51567889  T
Q  99 tattcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaat 151  Q
    | | |||||| |||| |||| || ||||||||||   ||||||||||||||||    
T  51567888 tgtacaagtttcaatacaaaatttctattttaaa---cttaacatgtgcaaat 51567839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 95 - 149
Target Start/End: Original strand, 27300507 - 27300561
Alignment:
Q  95 aaaatattcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaa 149  Q
    |||||||||||||| |||| |||| | ||||||||||| |||||||||| |||||    
T  27300507 aaaatattcaagtttcaatacaaattaactattttaaacttcttaacatctgcaa 27300561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 105 - 151
Target Start/End: Original strand, 48776887 - 48776933
Alignment:
Q  105 agttccaatgcaaagttactattttaaatttcttaacatgtgcaaat 151  Q
    |||||||||| ||| ||||| |||||||||||||||| |||||||||    
T  48776887 agttccaatgtaaatttacttttttaaatttcttaacttgtgcaaat 48776933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 90 - 151
Target Start/End: Original strand, 2566580 - 2566641
Alignment:
Q  90 aatacaaaatattcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaat 151  Q
    |||||||||| | |||||| |||| |||| ||||||||||||||||  ||||||||| ||||    
T  2566580 aatacaaaatgtacaagtttcaatacaaaattactattttaaattttctaacatgtgtaaat 2566641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 59 - 148
Target Start/End: Original strand, 26499637 - 26499725
Alignment:
Q  59 caacaattatttaacagaaagttatacatttaatacaaaatattcaagttccaatgcaaagttactattttaaatttcttaacatgtgca 148  Q
    |||||||||||||    |||||| || | ||||||  |||||| ||| ||||||| |||| || ||||||||||||||||||||||||||    
T  26499637 caacaattatttattcaaaagttttatacttaatattaaatatacaaattccaatacaaaatt-ctattttaaatttcttaacatgtgca 26499725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 24569407 - 24569351
Alignment:
Q  1 aacatgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattgaaa 57  Q
    |||||||||||||||| ||||||||||  ||||| || || ||| ||||||||||||    
T  24569407 aacatgtgcaatattggacatgttaagacaactacaaataataactttttattgaaa 24569351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 29932521 - 29932465
Alignment:
Q  1 aacatgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattgaaa 57  Q
    |||||||||||  |||||||||||||||  |||||||| || || ||||||||||||    
T  29932521 aacatgtgcaaatttgcacatgttaaggatactaaaagaagcaactttttattgaaa 29932465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 29981675 - 29981619
Alignment:
Q  1 aacatgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattgaaa 57  Q
    |||||||||||  |||||||||||||||  |||||||| || || ||||||||||||    
T  29981675 aacatgtgcaaatttgcacatgttaaggatactaaaagaagcaactttttattgaaa 29981619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 35415191 - 35415139
Alignment:
Q  1 aacatgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttatt 53  Q
    |||||||||| |||||||||||||||   |||||||| |||||||||| ||||    
T  35415191 aacatgtgcattattgcacatgttaaaacaactaaaaatagtaagtttgtatt 35415139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 115 - 151
Target Start/End: Original strand, 36812381 - 36812417
Alignment:
Q  115 caaagttactattttaaatttcttaacatgtgcaaat 151  Q
    ||||||||||| |||||| ||||||||||||||||||    
T  36812381 caaagttactactttaaacttcttaacatgtgcaaat 36812417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 37332123 - 37332159
Alignment:
Q  1 aacatgtgcaatattgcacatgttaaggtaactaaaa 37  Q
    |||||||||||||||||||||||||| | ||||||||    
T  37332123 aacatgtgcaatattgcacatgttaatgcaactaaaa 37332159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 107 - 151
Target Start/End: Original strand, 38277448 - 38277492
Alignment:
Q  107 ttccaatgcaaagttactattttaaatttcttaacatgtgcaaat 151  Q
    ||||||| |||| || |||||||||| ||||||||||||||||||    
T  38277448 ttccaatacaaaatttctattttaaacttcttaacatgtgcaaat 38277492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 131; Significance: 7e-68; HSPs: 56)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 131; E-Value: 7e-68
Query Start/End: Original strand, 1 - 151
Target Start/End: Complemental strand, 5583727 - 5583577
Alignment:
Q  1 aacatgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattgaaatcaacaattatttaacagaaagttatacatttaatacaaaata 100  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||| ||||||||| ||||||||||||||     
T  5583727 aacatgtgcaatattgcacatgttaaggtaactaaaagtagcaagtttttattgaaaccaacaattatttaacaaaaagttatatatttaatacaaaatg 5583628  T
Q  101 ttcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaat 151  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5583627 ttcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaat 5583577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 111; E-Value: 6e-56
Query Start/End: Original strand, 1 - 151
Target Start/End: Complemental strand, 7757955 - 7757805
Alignment:
Q  1 aacatgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattgaaatcaacaattatttaacagaaagttatacatttaatacaaaata 100  Q
    ||||||||||| |||| |||||||||||||||||||||||  ||||||||||| ||| |||||||||||||||| ||||||||| ||||||||||||||     
T  7757955 aacatgtgcaaaattgtacatgttaaggtaactaaaagtaacaagtttttattaaaaccaacaattatttaacaaaaagttatatatttaatacaaaatg 7757856  T
Q  101 ttcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaat 151  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  7757855 ttcaagttccaatgcaaagttactattttaaatttcttaacatgtgtaaat 7757805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 10 - 151
Target Start/End: Complemental strand, 38248579 - 38248439
Alignment:
Q  10 aatattgcacatgttaaggtaactaaaagtagtaagtttttattgaaatcaacaattatttaacagaaagttatacatttaatacaaaatattcaagttc 109  Q
    |||||||||||||||||||||||||||| ||| ||||||||||| ||| |||||||||||||||| ||| ||||| |||||||||||||| |||||||||    
T  38248579 aatattgcacatgttaaggtaactaaaa-tagcaagtttttattaaaaccaacaattatttaacaaaaaattatatatttaatacaaaatgttcaagttc 38248481  T
Q  110 caatgcaaagttactattttaaatttcttaacatgtgcaaat 151  Q
    ||||| ||| ||||||||||||||||||||||||||||||||    
T  38248480 caatgtaaaattactattttaaatttcttaacatgtgcaaat 38248439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 1 - 151
Target Start/End: Original strand, 19228434 - 19228584
Alignment:
Q  1 aacatgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattg-aaatcaacaattatttaacagaaagttatacatttaatacaaaat 99  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||| |||| ||| ||||||||||| |  | ||||||| | |||||||||||||     
T  19228434 aacatgtgcaatattgcacatgttaaggtaactaaaagtagtaacttttcattgaaaaccaacaattattgatta-aaagttacatatttaatacaaaaa 19228532  T
Q  100 attcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaat 151  Q
    |  ||||||||||  ||||||||||| |||||| ||||||||||||||||||    
T  19228533 acacaagttccaagtcaaagttactactttaaacttcttaacatgtgcaaat 19228584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 1 - 151
Target Start/End: Complemental strand, 34214121 - 34213968
Alignment:
Q  1 aacatgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattgaaatc-aacaattatttaacagaaagttatacattt--aatacaaa 97  Q
    |||||||  |||| |||||||||||| | |||||||| ||||||||||||||||||| | ||||||||||| | | ||||||||| ||||  |||| |||    
T  34214121 aacatgtataatactgcacatgttaaagcaactaaaaatagtaagtttttattgaaaaccaacaattattttataaaaagttatatatttttaataaaaa 34214022  T
Q  98 atattcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaat 151  Q
    || |||||||||||||| ||| ||||||||||||||||||||||||||||||||    
T  34214021 atgttcaagttccaatgaaaaattactattttaaatttcttaacatgtgcaaat 34213968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 1 - 151
Target Start/End: Complemental strand, 15411792 - 15411641
Alignment:
Q  1 aacatgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattg-aaatcaacaattatttaacagaaagttatacatttaatacaaaat 99  Q
    |||||||||||||||||||||||||| ||||||||||||||||| ||||||||| ||| ||||||| |||||  | |||| || | |||||||| |||||    
T  15411792 aacatgtgcaatattgcacatgttaaagtaactaaaagtagtaattttttattgaaaaacaacaataatttattaaaaagctacatatttaatataaaat 15411693  T
Q  100 attcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaat 151  Q
       |||||| |||  |||||||||||||||||| ||||||||||||||||||    
T  15411692 gaacaagtttcaagacaaagttactattttaaacttcttaacatgtgcaaat 15411641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 30 - 143
Target Start/End: Complemental strand, 11661059 - 11660946
Alignment:
Q  30 aactaaaagtagtaagtttttattgaaatcaacaattatttaacagaaagttatacatttaatacaaaatattcaagttccaatgcaaagttactatttt 129  Q
    |||||||||||| || |||||||||||   ||||||||||||  | |||||||||||||||||||||||||| ||||||||||||||||||||||||||     
T  11661059 aactaaaagtagcaaatttttattgaataaaacaattatttattaaaaagttatacatttaatacaaaatatacaagttccaatgcaaagttactattta 11660960  T
Q  130 aaatttcttaacat 143  Q
    ||| ||||||||||    
T  11660959 aaacttcttaacat 11660946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 23 - 151
Target Start/End: Complemental strand, 24729725 - 24729596
Alignment:
Q  23 ttaaggtaactaaaagtagtaagtttttattgaaa-tcaacaattatttaacagaaagttatacatttaatacaaaatattcaagttccaatgcaaagtt 121  Q
    |||| |||||||||| |||||| |||||||||||| | || |||||||||  | ||||||||  | |||||||||||||| ||| |||||||||||||||    
T  24729725 ttaaagtaactaaaaatagtaaatttttattgaaaataaataattatttattaaaaagttatgtaattaatacaaaatatacaaattccaatgcaaagtt 24729626  T
Q  122 actattttaaatttcttaacatgtgcaaat 151  Q
    ||||||||||||||||||||||||||||||    
T  24729625 actattttaaatttcttaacatgtgcaaat 24729596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 7 - 151
Target Start/End: Complemental strand, 40562241 - 40562096
Alignment:
Q  7 tgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattgaaa-tcaacaattatttaacagaaagttatacatttaatacaaaatattcaa 105  Q
    |||||||||| ||||||||| |||  |||||| |||||||||||||||||| ||||||||||||||  | | ||||||| ||| ||||||||||||  ||    
T  40562241 tgcaatattgtacatgttaaagtagttaaaagcagtaagtttttattgaaaatcaacaattatttattaaagagttatatattaaatacaaaatataaaa 40562142  T
Q  106 gttccaatgcaaagttactattttaaatttcttaacatgtgcaaat 151  Q
    ||| ||||||||||||| ||||||||| || |||||||||||||||    
T  40562141 gtttcaatgcaaagttaatattttaaactttttaacatgtgcaaat 40562096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 1 - 151
Target Start/End: Complemental strand, 27665213 - 27665063
Alignment:
Q  1 aacatgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattg-aaatcaacaattatttaacagaaagttatacatttaatacaaaat 99  Q
    |||||||||||||||||||||||||||| ||||||||||||||| |||| |||| ||| |||||||||||||  | ||||||| | |||||||| ||||     
T  27665213 aacatgtgcaatattgcacatgttaaggcaactaaaagtagtaacttttcattgaaaaccaacaattatttatta-aaagttacatatttaatataaaaa 27665115  T
Q  100 attcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaat 151  Q
    |  ||||||||||  ||||||||||| |||||| |||||| |||||||||||    
T  27665114 acacaagttccaagtcaaagttactactttaaacttcttatcatgtgcaaat 27665063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 1 - 141
Target Start/End: Complemental strand, 26230022 - 26229883
Alignment:
Q  1 aacatgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattgaaatcaacaattatttaacagaaagttatacatttaatacaaaata 100  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||| ||| ||||||||||| |  | ||||||| | |||||||| |||| |    
T  26230022 aacatgtgcaatattgcacatgttaaggtaactaaaagtagtaattttttattaaaaccaacaattattgatta-aaagttacatatttaatataaaaaa 26229924  T
Q  101 ttcaagttccaatgcaaagttactattttaaatttcttaac 141  Q
    |  || ||  ||  |||||||||||||||||| ||||||||    
T  26229923 tataaattttaagtcaaagttactattttaaacttcttaac 26229883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 1 - 151
Target Start/End: Original strand, 12016675 - 12016825
Alignment:
Q  1 aacatgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattg-aaatcaacaattatttaacagaaagttatacatttaatacaaaat 99  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||| ||||||||||| |  | |||| || | |||||||| ||||     
T  12016675 aacatgtgcaatattgcacatgttaaggtaactaaaagtagtaactttttattgaaaaccaacaattattgatta-aaagctacatatttaatataaaaa 12016773  T
Q  100 attcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaat 151  Q
    |  ||||||||||   ||| |||||| |||||| ||||||| ||||||||||    
T  12016774 acacaagttccaagttaaaattactactttaaacttcttaatatgtgcaaat 12016825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 1 - 151
Target Start/End: Complemental strand, 16126728 - 16126578
Alignment:
Q  1 aacatgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattg-aaatcaacaattatttaacagaaagttatacatttaatacaaaat 99  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||| |||| ||| ||||||||||| |  | |||| || | |||||||| ||||     
T  16126728 aacatgtgcaatattgcacatgttaaggtaactaaaagtagtaatttttcattgaaaaccaacaattattgatta-aaagctacatatttaatataaaaa 16126630  T
Q  100 attcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaat 151  Q
    |  |||||| |||   |||||||||| |||||| ||||||||||||||||||    
T  16126629 acacaagtttcaagttaaagttactactttaaacttcttaacatgtgcaaat 16126578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 1 - 151
Target Start/End: Complemental strand, 16919323 - 16919173
Alignment:
Q  1 aacatgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattg-aaatcaacaattatttaacagaaagttatacatttaatacaaaat 99  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||| ||| ||| ||||||||||| |  | ||||||| | |||||||| ||||     
T  16919323 aacatgtgcaatattgcacatgttaaggtaactaaaagtagtaactttttgttgaaaaccaacaattattgatta-aaagttacatatttaatataaaaa 16919225  T
Q  100 attcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaat 151  Q
    |  |||||| |||  ||||||||||| |||||| || |||| ||||||||||    
T  16919224 acacaagtttcaagtcaaagttactactttaaacttgttaatatgtgcaaat 16919173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 81 - 151
Target Start/End: Complemental strand, 29157918 - 29157848
Alignment:
Q  81 tatacatttaatacaaaatattcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaat 151  Q
    |||| |||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||    
T  29157918 tatatatttaatacaaaatatacaagttccaatgcaaagttactatttaaaatttcttaacatgtgcaaat 29157848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 4 - 151
Target Start/End: Complemental strand, 13351378 - 13351230
Alignment:
Q  4 atgtgcaatattgcacatgttaaggtaactaaaagtag-taagtttttattg-aaatcaacaattatttaacagaaagttatacatttaatacaaaatat 101  Q
    |||||||||||||||||||||||||||||||||||||| ||  ||||||||| ||||||||||||| ||||   ||||||| | ||| |||| |||| |     
T  13351378 atgtgcaatattgcacatgttaaggtaactaaaagtagttatttttttattgaaaatcaacaatta-ttaattaaaagttacatattaaatataaaaaac 13351280  T
Q  102 tcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaat 151  Q
     ||||||| ||  ||||||||||| |||||| ||||||||||||||||||    
T  13351279 acaagttctaagtcaaagttactactttaaacttcttaacatgtgcaaat 13351230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 1 - 151
Target Start/End: Original strand, 14377433 - 14377583
Alignment:
Q  1 aacatgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattg-aaatcaacaattatttaacagaaagttatacatttaatacaaaat 99  Q
    |||| ||||||||||||||||||||||| ||||||||||||||| ||||||||| ||| ||||||||||||   | ||||||| | |||||||| ||||     
T  14377433 aacacgtgcaatattgcacatgttaaggcaactaaaagtagtaactttttattgaaaaccaacaattatttgtta-aaagttacatatttaatataaaaa 14377531  T
Q  100 attcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaat 151  Q
    |  |||||| |||  ||||||||||| |||||| |||||| ||||| |||||    
T  14377532 acacaagtttcaagtcaaagttactactttaaacttcttatcatgtacaaat 14377583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 1 - 151
Target Start/End: Original strand, 22705463 - 22705613
Alignment:
Q  1 aacatgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattg-aaatcaacaattatttaacagaaagttatacatttaatacaaaat 99  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||| |||| ||| ||||||||| ||||   ||||||| | |||||||| ||||     
T  22705463 aacatgtgcaatattgcacatgttaaggtaactaaaagtagtaacttttcattgaaaaccaacaatta-ttaatttaaagttacatatttaatataaaaa 22705561  T
Q  100 attcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaat 151  Q
    |  |||||| |||   ||| |||||| |||||| ||||||| ||||||||||    
T  22705562 acacaagtttcaagttaaaattactactttaaacttcttaaaatgtgcaaat 22705613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 39904217 - 39904148
Alignment:
Q  1 aacatgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattg-aaatcaacaattatt 69  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||| |||| |||||||||||||||    
T  39904217 aacatgtgcaatattgcacatgttaaggtaactaaaagtagtaacttttcattgaaaatcaacaattatt 39904148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 1 - 151
Target Start/End: Complemental strand, 20566187 - 20566036
Alignment:
Q  1 aacatgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattg-aaatcaacaattatttaacagaaagttatacatttaatacaaaat 99  Q
    |||||||||||||||||||||||||| |||||||||| ||| || | ||||||| ||| |||||||||||||  | ||  ||||  |||||||| |||||    
T  20566187 aacatgtgcaatattgcacatgttaaagtaactaaaaatagcaactatttattgaaaaacaacaattatttattaaaatattatctatttaataaaaaat 20566088  T
Q  100 attcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaat 151  Q
    |  ||||||||||| ||||  || || |||||| ||||||||||||| ||||    
T  20566087 acacaagttccaatacaaacataatactttaaacttcttaacatgtgtaaat 20566036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 1 - 148
Target Start/End: Original strand, 9450265 - 9450413
Alignment:
Q  1 aacatgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattgaaat-caacaattatttaacagaaagttatacatttaatacaaaat 99  Q
    ||||||||||||||||||||| |||| |||  ||||| ||  || | ||||||||||  |||||||||||||  | ||| ||||| |||||||| |||||    
T  9450265 aacatgtgcaatattgcacatcttaaagtagttaaaaataaaaactatttattgaaaaacaacaattatttattaaaaaattatatatttaatagaaaat 9450364  T
Q  100 attcaagttccaatgcaaagttactattttaaatttcttaacatgtgca 148  Q
    |  ||| ||||||| ||||  ||||| ||||||||||||||||||||||    
T  9450365 acacaaattccaatacaaacatactactttaaatttcttaacatgtgca 9450413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 79 - 151
Target Start/End: Complemental strand, 17235029 - 17234957
Alignment:
Q  79 gttatacatttaatacaaaatattcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaat 151  Q
    |||||| ||| |||||||||||| ||| ||||||| |||| ||||||||||||||||||||||||||||||||    
T  17235029 gttatatattaaatacaaaatatacaaattccaatacaaaattactattttaaatttcttaacatgtgcaaat 17234957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 151
Target Start/End: Original strand, 9747325 - 9747476
Alignment:
Q  1 aacatgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattg-aaatcaacaattatttaacagaaagttatacatttaatacaaaat 99  Q
    ||||||||||||| | ||||||||||  |||||||||||||||| | ||||||| ||| |||||| |||||   | |||| || | |||||||| |||||    
T  9747325 aacatgtgcaatagtacacatgttaaattaactaaaagtagtaactatttattgaaaaacaacaactatttgtaaaaaagctacatatttaatataaaat 9747424  T
Q  100 attcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaat 151  Q
       ||||||||||  |||| ||||||||||||| ||||||||||||| ||||    
T  9747425 gaacaagttccaagacaaaattactattttaaacttcttaacatgtgaaaat 9747476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 10 - 67
Target Start/End: Complemental strand, 22162237 - 22162180
Alignment:
Q  10 aatattgcacatgttaaggtaactaaaagtagtaagtttttattgaaatcaacaatta 67  Q
    ||||||||||||||||||| ||||||||||||||| |||||||||||| |||||||||    
T  22162237 aatattgcacatgttaaggcaactaaaagtagtaactttttattgaaaccaacaatta 22162180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 202 - 333
Target Start/End: Original strand, 1681104 - 1681237
Alignment:
Q  202 tacataatcataaatgaaaggttcctgaaatttggaaaa---aataaataaatt--ttgggtgcaaatacaatttttaaatgacatcttttggaatatct 296  Q
    ||||||||||||||||||||||||| |||||| ||||||   || |||| ||||  ||||||||  ||||||| |||||||||||| |||||||| |       
T  1681104 tacataatcataaatgaaaggttccggaaattaggaaaagaaaaaaaattaattatttgggtgcccatacaatatttaaatgacatattttggaaaa--a 1681201  T
Q  297 cctatcataaggtatatttcacatttatttttctagc 333  Q
     ||||||| ||| ||||||||||||||||||||||||    
T  1681202 tctatcat-aggcatatttcacatttatttttctagc 1681237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 5 - 151
Target Start/End: Original strand, 16123291 - 16123437
Alignment:
Q  5 tgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattgaaatc-aacaattatttaacagaaagttatacatttaatacaaaatattc 103  Q
    |||||||||||||||||||||||||||||||||| ||||| |||| ||||||| | ||||||| || |  | || |||| | |||||||| |||| |  |    
T  16123291 tgtgcaatattgcacatgttaaggtaactaaaagaagtaacttttcattgaaaacaaacaattgttgatta-aatgttacatatttaatataaaaaacac 16123389  T
Q  104 aagttccaatgcaaagttactattttaaatttcttaacatgtgcaaat 151  Q
    ||||||| |  |||| |||||| |||||| |||||| |||||||||||    
T  16123390 aagttcctaatcaaaattactaatttaaacttcttatcatgtgcaaat 16123437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 96 - 151
Target Start/End: Original strand, 17265508 - 17265563
Alignment:
Q  96 aaatattcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaat 151  Q
    |||||||||||||| || ||||||||||||||||||||||||||||| ||||||||    
T  17265508 aaatattcaagttcgaacgcaaagttactattttaaatttcttaacaagtgcaaat 17265563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 151
Target Start/End: Original strand, 23932573 - 23932724
Alignment:
Q  1 aacatgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattg-aaatcaacaattatttaacagaaagttatacatttaatacaaaat 99  Q
    |||||||||||||||||||||||||| | |||||||| |||||| |||  |||| |||  ||||||||||||  | |||||| || | |||||| |||||    
T  23932573 aacatgtgcaatattgcacatgttaaaggaactaaaaatagtaactttacattgaaaaagaacaattatttattaaaaagttttatagttaatataaaat 23932672  T
Q  100 attcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaat 151  Q
       |||||||| || |||  ||||||||||||| ||||||| || |||||||    
T  23932673 gcacaagttccgatacaattttactattttaaacttcttaatatatgcaaat 23932724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 151
Target Start/End: Original strand, 43806368 - 43806519
Alignment:
Q  1 aacatgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattg-aaatcaacaattatttaacagaaagttatacatttaatacaaaat 99  Q
    ||||||||||| ||||||||||||||   || ||| |||||||| ||||| ||| ||| |||||||||||||    |||||| || ||||||||  ||||    
T  43806368 aacatgtgcaacattgcacatgttaaaacaattaatagtagtaactttttcttggaaaacaacaattatttattcaaaagttttatatttaatattaaat 43806467  T
Q  100 attcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaat 151  Q
     | |||||| |||| |||| || |||||||||| || |||||||||||||||    
T  43806468 gtacaagtttcaatacaaaatttctattttaaactttttaacatgtgcaaat 43806519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 4 - 71
Target Start/End: Complemental strand, 43388933 - 43388865
Alignment:
Q  4 atgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattg-aaatcaacaattattta 71  Q
    |||||||||||||||||| |||| | |||||||||||| || ||||||||| |||||||||||||||||    
T  43388933 atgtgcaatattgcacatcttaaagcaactaaaagtagaaattttttattgaaaatcaacaattattta 43388865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 151
Target Start/End: Complemental strand, 25998172 - 25998021
Alignment:
Q  1 aacatgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattg-aaatcaacaattatttaacagaaagttatacatttaatacaaaat 99  Q
    |||||||||| ||||||||||||||| ||||||||||||   || ||||||||| ||| |||||||||||||  | |||| || | ||||| ||  ||||    
T  25998172 aacatgtgcattattgcacatgttaaagtaactaaaagtgaaaactttttattgaaaaacaacaattatttattaaaaagatacatatttattattaaat 25998073  T
Q  100 attcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaat 151  Q
       |||||||||||||||| ||| | |||||| ||| ||||||  |||||||    
T  25998072 gaacaagttccaatgcaaaattaattttttaatttttttaacacatgcaaat 25998021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 10690791 - 10690860
Alignment:
Q  1 aacatgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttatt-gaaatcaacaattatt 69  Q
    ||||||||||||||||||||||||||| ||||||||| |||||| |||| |||  ||| |||||||||||    
T  10690791 aacatgtgcaatattgcacatgttaagttaactaaaattagtaatttttcattaaaaaccaacaattatt 10690860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 14 - 151
Target Start/End: Original strand, 25948058 - 25948198
Alignment:
Q  14 ttgcacatgttaaggtaactaaaagtagtaag--tttttattgaaat-caacaattatttaacagaaagttatacatttaatacaaaatattcaagttcc 110  Q
    ||||||||||||| | || |||||||||| ||  ||||||||||||  |||||||||||||    ||| ||||| ||||| |||||||| |  || || |    
T  25948058 ttgcacatgttaaagcaattaaaagtagttagcgtttttattgaaaaacaacaattatttatttaaaaattatatatttattacaaaatgtataaatttc 25948157  T
Q  111 aatgcaaagttactattttaaatttcttaacatgtgcaaat 151  Q
    |||||||| || | ||| |||||||||||||||||||||||    
T  25948158 aatgcaaaatttcaattataaatttcttaacatgtgcaaat 25948198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 33 - 97
Target Start/End: Complemental strand, 40503119 - 40503054
Alignment:
Q  33 taaaagtagtaagtttttattgaaatc-aacaattatttaacagaaagttatacatttaatacaaa 97  Q
    ||||||||  ||||||||||||||| | ||||||||||||||| ||||||||| ||||||||||||    
T  40503119 taaaagtaacaagtttttattgaaaaccaacaattatttaacaaaaagttatatatttaatacaaa 40503054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 30 - 132
Target Start/End: Original strand, 2051651 - 2051754
Alignment:
Q  30 aactaaaagtagtaagtttttattgaaat-caacaattatttaacagaaagttatacatttaatacaaaatattcaagttccaatgcaaagttactattt 128  Q
    |||||||| ||| |||||||||||||||  |||||||||||||  | ||| ||| | |||||||| |||||||  ||||  ||||||| |||||||||||    
T  2051651 aactaaaattagcaagtttttattgaaaaacaacaattatttattaaaaatttaaatatttaatataaaatatataagtatcaatgcatagttactattt 2051750  T
Q  129 taaa 132  Q
    ||||    
T  2051751 taaa 2051754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 151
Target Start/End: Original strand, 7720123 - 7720274
Alignment:
Q  1 aacatgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattg-aaatcaacaattatttaacagaaagttatacatttaatacaaaat 99  Q
    ||||||||||| ||||||||||||||   |||||| |||||||| ||||| ||| ||| |||||||||||||    ||||||  | ||||||||| || |    
T  7720123 aacatgtgcaacattgcacatgttaaaacaactaatagtagtaacttttttttgaaaaacaacaattatttattcaaaagtttaatatttaatactaagt 7720222  T
Q  100 attcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaat 151  Q
     | || |||||||| |||| || |||| ||||| || |||||| ||||||||    
T  7720223 gtacacgttccaatacaaaatttctatcttaaactttttaacacgtgcaaat 7720274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 14 - 151
Target Start/End: Complemental strand, 5853622 - 5853482
Alignment:
Q  14 ttgcacatgttaaggtaactaaaagtagtaagt--ttttattgaaat-caacaattatttaacagaaagttatacatttaatacaaaatattcaagttcc 110  Q
    ||||||||||||| | || |||||||||| |||  |||||||||||  |||||||||||||    ||| ||||| ||||| |||||||| |  || || |    
T  5853622 ttgcacatgttaaagcaattaaaagtagttagtgtttttattgaaaaacaacaattatttatttaaaaattatatatttattacaaaatgtataaatttc 5853523  T
Q  111 aatgcaaagttactattttaaatttcttaacatgtgcaaat 151  Q
    |||||||| || | ||| |||| ||||||||||||||||||    
T  5853522 aatgcaaaatttcaattataaacttcttaacatgtgcaaat 5853482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 14 - 151
Target Start/End: Complemental strand, 16493691 - 16493551
Alignment:
Q  14 ttgcacatgttaaggtaactaaaagtagtaa--gtttttattgaaat-caacaattatttaacagaaagttatacatttaatacaaaatattcaagttcc 110  Q
    ||||||||||||| | || |||||||||| |  |||||||||||||  |||||||||||||    ||| ||||| ||||| |||||||| |  || || |    
T  16493691 ttgcacatgttaaagcaattaaaagtagttaatgtttttattgaaaaacaacaattatttatttaaaaattatatatttattacaaaatgtataaatttc 16493592  T
Q  111 aatgcaaagttactattttaaatttcttaacatgtgcaaat 151  Q
    |||||||| || | ||| |||| ||||||||||||||||||    
T  16493591 aatgcaaaatttcaattataaacttcttaacatgtgcaaat 16493551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 98
Target Start/End: Original strand, 34817552 - 34817649
Alignment:
Q  1 aacatgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattgaaatcaacaattatttaacagaaagttatacatttaatacaaaa 98  Q
    ||||| ||||||||||||| | ||||  ||||||||| ||  || | |||||||||| |||||||||||||  | ||||||||| |||||||| ||||    
T  34817552 aacatatgcaatattgcacgtattaaaataactaaaaatatcaactatttattgaaaacaacaattatttattaaaaagttatatatttaataaaaaa 34817649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 86 - 151
Target Start/End: Complemental strand, 37471824 - 37471759
Alignment:
Q  86 atttaatacaaaatattcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaat 151  Q
    |||||||| |||||   |||||| |||  |||||||||||||||||| ||||||||||||||||||    
T  37471824 atttaatataaaatgaacaagtttcaagacaaagttactattttaaacttcttaacatgtgcaaat 37471759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 4579958 - 4579902
Alignment:
Q  1 aacatgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattgaaa 57  Q
    ||||||||||||||| |||||||||||| |||||||  |||||| |||| |||||||    
T  4579958 aacatgtgcaatattacacatgttaaggaaactaaatatagtaacttttcattgaaa 4579902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 151
Target Start/End: Complemental strand, 12919521 - 12919369
Alignment:
Q  1 aacatgtgcaatattgcacatgttaaggtaactaaaagtagtaa-gtttttattg-aaatcaacaattatttaacagaaagttatacatttaatacaaaa 98  Q
    |||||||||||||||||||||||||| | || |||||||| |||  ||||||||| |||  | |||| |||||  | |||  || | |||||||| ||||    
T  12919521 aacatgtgcaatattgcacatgttaaagcaattaaaagtattaatttttttattgaaaagtagcaataatttattaaaaaactacatatttaatataaaa 12919422  T
Q  99 tattcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaat 151  Q
    |   |||||| |||   |||||||||||||||||||| |||||||||| ||||    
T  12919421 tgaacaagtttcaagataaagttactattttaaattttttaacatgtgtaaat 12919369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 144
Target Start/End: Complemental strand, 36612901 - 36612757
Alignment:
Q  1 aacatgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttatt-gaaatcaacaattatttaacagaaagttatacatttaatacaaaat 99  Q
    ||||||||||| ||||| ||||||||  ||||||| |||||||| ||||| || |||| ||||| |||||||    |||||| || ||||||||  ||||    
T  36612901 aacatgtgcaacattgctcatgttaaaataactaatagtagtaacttttttttggaaaacaacatttatttattcaaaagttttatatttaatattaaat 36612802  T
Q  100 attcaagttccaatgcaaagttactattttaaatttcttaacatg 144  Q
     | ||||||  ||| |||| ||  ||||||||| |||||||||||    
T  36612801 gtacaagttttaatacaaaatttttattttaaacttcttaacatg 36612757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 144
Target Start/End: Complemental strand, 36620752 - 36620608
Alignment:
Q  1 aacatgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttatt-gaaatcaacaattatttaacagaaagttatacatttaatacaaaat 99  Q
    ||||||||||| ||||| ||||||||  ||||||| |||||||| ||||| || |||| ||||| |||||||    |||||| || ||||||||  ||||    
T  36620752 aacatgtgcaacattgctcatgttaaaataactaatagtagtaacttttttttggaaaacaacatttatttattcaaaagttttatatttaatattaaat 36620653  T
Q  100 attcaagttccaatgcaaagttactattttaaatttcttaacatg 144  Q
     | ||||||  ||| |||| ||  ||||||||| |||||||||||    
T  36620652 gtacaagttttaatacaaaatttttattttaaacttcttaacatg 36620608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 46 - 151
Target Start/End: Complemental strand, 2544333 - 2544228
Alignment:
Q  46 tttttattgaaatcaacaattatttaacagaaagttatacatttaatacaaaatattcaagttccaatgcaaagttactatttt-aaatttcttaacatg 144  Q
    ||||||||||||| ||||||||||||  | ||| ||||||||| |||| ||||||  ||||||  ||| |||| |||||||||| || ||| ||||||||    
T  2544333 tttttattgaaat-aacaattatttattaaaaaattatacattaaatataaaatacacaagttttaatacaaacttactattttgaacttttttaacatg 2544235  T
Q  145 tgcaaat 151  Q
    | |||||    
T  2544234 ttcaaat 2544228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 12438817 - 12438747
Alignment:
Q  1 aacatgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattgaaatcaacaattattta 71  Q
    |||||||||||||||||| ||||| ||  |||||||| || ||| |||| ||| ||| |||||||||||||    
T  12438817 aacatgtgcaatattgcatatgttcagacaactaaaaataataacttttcattaaaaccaacaattattta 12438747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 14 - 151
Target Start/End: Original strand, 22704556 - 22704696
Alignment:
Q  14 ttgcacatgttaaggtaactaaaagtagtaa--gtttttattg-aaatcaacaattatttaacagaaagttatacatttaatacaaaatattcaagttcc 110  Q
    ||||||||||||| | || |||||||||| |  |||||||||| ||| |||||||||||||    ||| ||||| ||||| |||||||| |  || || |    
T  22704556 ttgcacatgttaaagcaattaaaagtagttagtgtttttattgaaaaacaacaattatttatttaaaaattatatatttattacaaaatgtataaatttc 22704655  T
Q  111 aatgcaaagttactattttaaatttcttaacatgtgcaaat 151  Q
    |||||||| || | ||| |||| ||||||| ||||||||||    
T  22704656 aatgcaaaatttcaattataaacttcttaagatgtgcaaat 22704696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 3286504 - 3286560
Alignment:
Q  1 aacatgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattgaaa 57  Q
    |||||||||||  |||||||||||||||  |||||||| || || ||||||||||||    
T  3286504 aacatgtgcaaatttgcacatgttaaggatactaaaagaagcaactttttattgaaa 3286560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 3504478 - 3504534
Alignment:
Q  1 aacatgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattgaaa 57  Q
    |||||||||| |  |||||||||||| | |||| |||||||||| ||||||||||||    
T  3504478 aacatgtgcatttctgcacatgttaaagcaactgaaagtagtaactttttattgaaa 3504534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 3951259 - 3951315
Alignment:
Q  1 aacatgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattgaaa 57  Q
    |||||||||||  |||||||||||||||  |||||||| || || ||||||||||||    
T  3951259 aacatgtgcaaatttgcacatgttaaggatactaaaagaagcaactttttattgaaa 3951315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 3951420 - 3951365
Alignment:
Q  1 aacatgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattgaaa 57  Q
    |||||||||||  |||||||||||||||  ||| |||||||||||||| ||||||||    
T  3951420 aacatgtgcaaatttgcacatgttaaggatact-aaagtagtaagtttatattgaaa 3951365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 8847796 - 8847852
Alignment:
Q  1 aacatgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattgaaa 57  Q
    |||||||||||  |||||||||||||||  |||||||| || || ||||||||||||    
T  8847796 aacatgtgcaaatttgcacatgttaaggatactaaaagaagcaactttttattgaaa 8847852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 8847957 - 8847902
Alignment:
Q  1 aacatgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattgaaa 57  Q
    |||||||||||  |||||||||||||||  ||| |||||||||||||| ||||||||    
T  8847957 aacatgtgcaaatttgcacatgttaaggatact-aaagtagtaagtttatattgaaa 8847902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 29795066 - 29795102
Alignment:
Q  1 aacatgtgcaatattgcacatgttaaggtaactaaaa 37  Q
    ||||||||||||||||||||| |||| ||||||||||    
T  29795066 aacatgtgcaatattgcacatattaaagtaactaaaa 29795102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 107 - 147
Target Start/End: Complemental strand, 39607471 - 39607431
Alignment:
Q  107 ttccaatgcaaagttactattttaaatttcttaacatgtgc 147  Q
    ||||||| |||| ||| ||||||||||||||||||||||||    
T  39607471 ttccaatacaaacttattattttaaatttcttaacatgtgc 39607431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 43942023 - 43941967
Alignment:
Q  1 aacatgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattgaaa 57  Q
    |||||||||||  |||||||||||||||  |||||||| || || ||||||||||||    
T  43942023 aacatgtgcaaatttgcacatgttaaggatactaaaagaagcaactttttattgaaa 43941967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 127; Significance: 2e-65; HSPs: 57)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 1 - 151
Target Start/End: Original strand, 2161396 - 2161546
Alignment:
Q  1 aacatgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattgaaatcaacaattatttaacagaaagttatacatttaatacaaaata 100  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||| ||||||||| ||||||| ||||||     
T  2161396 aacatgtgcaatattgcacatgttaaggtaactaaaagtagcaagtttttattgaaaccaacaattatttaacaaaaagttatatatttaattcaaaatg 2161495  T
Q  101 ttcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaat 151  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2161496 ttcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaat 2161546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 1 - 151
Target Start/End: Complemental strand, 3306224 - 3306074
Alignment:
Q  1 aacatgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattgaaatcaacaattatttaacagaaagttatacatttaatacaaaata 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||| |||| |||||||||     
T  3306224 aacatgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattgaaaccaacaattatttaacaaaaagttatatatttgatacaaaatg 3306125  T
Q  101 ttcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaat 151  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  3306124 ttcaagtttcaatgcaaagttactattttaaatttcttaacatgtgcaaat 3306074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 1 - 151
Target Start/End: Complemental strand, 26364159 - 26364009
Alignment:
Q  1 aacatgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattgaaatcaacaattatttaacagaaagttatacatttaatacaaaata 100  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||| ||||||||||| |||||| |||||     
T  26364159 aacatgtgcaatattgcacatgttaaggtaactaaaagtagaaagtttttattaaaatcaacaattatttaacaaaaagttatacaattaatagaaaatg 26364060  T
Q  101 ttcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaat 151  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  26364059 ttcaagttccaatgcaaagttactattttaaatttcttaacatgcgcaaat 26364009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 1 - 151
Target Start/End: Original strand, 26682076 - 26682227
Alignment:
Q  1 aacatgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttt-tattgaaatcaacaattatttaacagaaagttatacatttaatacaaaat 99  Q
    ||||||||||||||||||||||||||   ||||||||||||||| |||| |||||||| |||||||||||||  | |||| || |||||||||| |||||    
T  26682076 aacatgtgcaatattgcacatgttaaaacaactaaaagtagtaatttttttattgaaaacaacaattatttattaaaaagctacacatttaatataaaat 26682175  T
Q  100 attcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaat 151  Q
       ||||||||||  ||||||||||| |||||||||||||||||||||||||    
T  26682176 gcacaagttccaagtcaaagttactactttaaatttcttaacatgtgcaaat 26682227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 1 - 149
Target Start/End: Original strand, 12131991 - 12132140
Alignment:
Q  1 aacatgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattgaaat-caacaattatttaacagaaagttatacatttaatacaaaat 99  Q
    ||||||||||| |||||||||||||| | |||||||||||| || ||||||||||||  | |||| ||||||  | ||||||||| |||||||| |||||    
T  12131991 aacatgtgcaacattgcacatgttaaagaaactaaaagtagcaactttttattgaaaaaccacaagtatttattaaaaagttatatatttaatataaaat 12132090  T
Q  100 attcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaa 149  Q
     ||||||||||||| |||| |||||| |||||||||||||||||||||||    
T  12132091 gttcaagttccaatacaaacttactactttaaatttcttaacatgtgcaa 12132140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 1 - 151
Target Start/End: Complemental strand, 13328110 - 13327960
Alignment:
Q  1 aacatgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattg-aaatcaacaattatttaacagaaagttatacatttaatacaaaat 99  Q
    |||||||||||||||||| ||||||||||||||||||||||||| |||| |||| ||| ||||||||||| |  | || |||| | |||||||| ||||     
T  13328110 aacatgtgcaatattgcatatgttaaggtaactaaaagtagtaacttttcattgaaaaccaacaattattgatta-aatgttacatatttaatataaaaa 13328012  T
Q  100 attcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaat 151  Q
    |  |||||| |||  ||||||||||| |||||| ||||||||||||||||||    
T  13328011 acacaagtttcaagtcaaagttactaatttaaacttcttaacatgtgcaaat 13327960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 1 - 151
Target Start/End: Complemental strand, 7140628 - 7140478
Alignment:
Q  1 aacatgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattg-aaatcaacaattatttaacagaaagttatacatttaatacaaaat 99  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||| ||||||||||| |  | |||  || | |||||||| ||||     
T  7140628 aacatgtgcaatattgcacatgttaaggtaactaaaagtagtaactttttattgaaaaccaacaattattgatta-aaaactacatatttaatataaaaa 7140530  T
Q  100 attcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaat 151  Q
    |  ||||||||||   ||| |||||| |||||| ||||||| ||||||||||    
T  7140529 acacaagttccaagttaaaattactactttaaacttcttaatatgtgcaaat 7140478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 1 - 151
Target Start/End: Original strand, 10129112 - 10129262
Alignment:
Q  1 aacatgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattg-aaatcaacaattatttaacagaaagttatacatttaatacaaaat 99  Q
    ||||||||||||||||||||||||||||||||||||| |||||| |||| |||| ||| ||||||||||| |  | |||| || | |||||||| ||||     
T  10129112 aacatgtgcaatattgcacatgttaaggtaactaaaattagtaatttttcattgaaaaccaacaattattgatta-aaagctacatatttaatataaaaa 10129210  T
Q  100 attcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaat 151  Q
    |  ||||||||||   ||| |||||| |||||| ||||||||||||||||||    
T  10129211 acacaagttccaagttaaaattactactttaaacttcttaacatgtgcaaat 10129262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 1 - 151
Target Start/End: Complemental strand, 14816295 - 14816145
Alignment:
Q  1 aacatgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattg-aaatcaacaattatttaacagaaagttatacatttaatacaaaat 99  Q
    |||||||||||||||||||||||||| | ||||||||||||||| ||||||||| ||| ||||||||| |||  | ||| ||| | ||||||||  ||||    
T  14816295 aacatgtgcaatattgcacatgttaaagaaactaaaagtagtaactttttattgaaaaccaacaattaattattaaaaatttacatatttaata-taaat 14816197  T
Q  100 attcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaat 151  Q
    |  ||||||  ||  ||||||||||| ||||||||||||| |||||||||||    
T  14816196 acacaagttttaagtcaaagttactactttaaatttcttatcatgtgcaaat 14816145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 1 - 151
Target Start/End: Original strand, 14829445 - 14829595
Alignment:
Q  1 aacatgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattg-aaatcaacaattatttaacagaaagttatacatttaatacaaaat 99  Q
    |||||||||||||||||||||||||| | ||||||||||||||| ||||||||| ||| ||||||||| |||  | ||| ||| | ||||||||  ||||    
T  14829445 aacatgtgcaatattgcacatgttaaagaaactaaaagtagtaactttttattgaaaaccaacaattaattattaaaaatttacatatttaata-taaat 14829543  T
Q  100 attcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaat 151  Q
    |  ||||||  ||  ||||||||||| ||||||||||||| |||||||||||    
T  14829544 acacaagttttaagtcaaagttactactttaaatttcttatcatgtgcaaat 14829595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 151
Target Start/End: Original strand, 20514640 - 20514792
Alignment:
Q  1 aacatgtgcaa-tattgcacatgttaaggtaactaaaagtagtaagtttttattgaaatcaac-aattatttaacagaaagttatacatttaatacaaaa 98  Q
    ||||||||||| ||||||||||| ||| | |||| |||||||||| || |||||||||   || |||||||||  | ||||||||| |||||||| ||||    
T  20514640 aacatgtgcaaatattgcacatggtaaagcaacttaaagtagtaatttcttattgaaaaataccaattatttattaaaaagttatatatttaatataaaa 20514739  T
Q  99 tattcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaat 151  Q
    | | ||||||||||  |||| |||| ||||||||||||||||| |||||||||    
T  20514740 tgtacaagttccaagacaaacttaccattttaaatttcttaacctgtgcaaat 20514792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 1 - 151
Target Start/End: Complemental strand, 35678444 - 35678294
Alignment:
Q  1 aacatgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattg-aaatcaacaattatttaacagaaagttatacatttaatacaaaat 99  Q
    |||||||||||||||||||||||||| | ||||||||||||||| |||| |||| ||| ||||||||| |||  | ||| ||| | ||||||||  ||||    
T  35678444 aacatgtgcaatattgcacatgttaaagaaactaaaagtagtaacttttcattgaaaaccaacaattaattattaaaaatttacatatttaata-taaat 35678346  T
Q  100 attcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaat 151  Q
    |  |||||| |||  ||||||||||| |||||| |||||| |||||||||||    
T  35678345 acacaagtttcaagtcaaagttactactttaaacttcttatcatgtgcaaat 35678294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 1 - 151
Target Start/End: Complemental strand, 36967240 - 36967089
Alignment:
Q  1 aacatgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattg-aaatcaacaattatttaacagaaagttatacatttaatacaaaat 99  Q
    ||||||||||| |||| ||||||||||  |||||| |||||||| ||||| ||| ||| |||||||||| ||    |||||| || ||||||||  ||||    
T  36967240 aacatgtgcaacattgtacatgttaagacaactaatagtagtaactttttcttggaaaacaacaattatatattcaaaagttttatatttaatattaaat 36967141  T
Q  100 attcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaat 151  Q
     | |||||| |||| ||||||| |||||||||| ||||||||||||||||||    
T  36967140 gtgcaagtttcaatacaaagtttctattttaaacttcttaacatgtgcaaat 36967089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 1 - 151
Target Start/End: Complemental strand, 39701972 - 39701822
Alignment:
Q  1 aacatgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattg-aaatcaacaattatttaacagaaagttatacatttaatacaaaat 99  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||  ||| ||| |||||||||  |||   ||||||| | |||||||| ||||     
T  39701972 aacatgtgcaatattgcacatgttaaggtaactaaaagtagtaacttttcgttgaaaaccaacaatta-ctaattaaaagttacatatttaatataaaaa 39701874  T
Q  100 attcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaat 151  Q
    |  ||| || |||  ||||||||||| |||||| || |||||||||||||||    
T  39701873 acacaaatttcaagtcaaagttactactttaaacttgttaacatgtgcaaat 39701822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 2 - 151
Target Start/End: Original strand, 9801678 - 9801827
Alignment:
Q  2 acatgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattg-aaatcaacaattatttaacagaaagttatacatttaatacaaaata 100  Q
    ||||||||||||||| |||| |||| |||| |||||||||||| |||| |||| ||||||||||||||| |  | ||||||||| |||||||| || | |    
T  9801678 acatgtgcaatattgtacatattaaagtaattaaaagtagtaacttttcattgaaaatcaacaattattgatta-aaagttatatatttaatataacaaa 9801776  T
Q  101 ttcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaat 151  Q
       ||||| |||  ||||||||||| |||||| ||||||||||||||||||    
T  9801777 cataagtttcaagtcaaagttactactttaaacttcttaacatgtgcaaat 9801827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 1 - 144
Target Start/End: Original strand, 9743870 - 9744013
Alignment:
Q  1 aacatgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattg-aaatcaacaattatttaacagaaagttatacatttaatacaaaat 99  Q
    ||||||||||||||||  |||||||||  ||||||||||||||| ||||||||| ||| |||||||||||||  | ||||||| | |||||||| ||||     
T  9743870 aacatgtgcaatattgtgcatgttaagacaactaaaagtagtaattttttattgaaaaccaacaattatttatta-aaagttacatatttaatataaaaa 9743968  T
Q  100 attcaagttccaatgcaaagttactattttaaatttcttaacatg 144  Q
    |   |||||||||  ||||||||||| |||||| |||||| ||||    
T  9743969 acataagttccaagtcaaagttactactttaaacttcttatcatg 9744013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 151
Target Start/End: Complemental strand, 4080563 - 4080413
Alignment:
Q  1 aacatgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattgaaatc-aacaattatttaacagaaagttatacatttaatacaaaat 99  Q
    |||||||| ||||||||||||||||||| || |||||||||||| |||| ||||||| | |||||||| |||  | ||| ||| | ||||||||  ||||    
T  4080563 aacatgtgtaatattgcacatgttaaggaaagtaaaagtagtaacttttcattgaaaactaacaattaattactaaaaatttacatatttaata-taaat 4080465  T
Q  100 attcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaat 151  Q
       |||||| |||  ||||||||||| ||||||||||||| |||||||||||    
T  4080464 gcacaagtttcaagtcaaagttactactttaaatttcttatcatgtgcaaat 4080413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 2 - 151
Target Start/End: Complemental strand, 19344005 - 19343855
Alignment:
Q  2 acatgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattg-aaatcaacaattatttaacagaaagttatacatttaata-caaaat 99  Q
    ||||||||||||||||||||||||||||||| ||||||||||| |||| |||| ||| ||||||||||| |  | ||||||| | ||||||||  ||||     
T  19344005 acatgtgcaatattgcacatgttaaggtaaccaaaagtagtaacttttcattgaaaaccaacaattattgagta-aaagttacatatttaatattaaaaa 19343907  T
Q  100 attcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaat 151  Q
    || |||||| |||  |||| |||||| ||||||  | |||||||||||||||    
T  19343906 atacaagtttcaagtcaaaattactactttaaacgtgttaacatgtgcaaat 19343855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 151
Target Start/End: Complemental strand, 40210990 - 40210840
Alignment:
Q  1 aacatgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattg-aaatcaacaattatttaacagaaagttatacatttaatacaaaat 99  Q
    |||||||||||||||||| ||||||||||||||||||||| ||| |||| |||| ||| ||||||||||| |  | || |||| | |||||||| ||||     
T  40210990 aacatgtgcaatattgcatatgttaaggtaactaaaagtattaacttttcattgaaaaccaacaattattgatta-aatgttacatatttaatataaaaa 40210892  T
Q  100 attcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaat 151  Q
    |  ||| ||| ||  ||||||||||| ||||||  |||||||||||||||||    
T  40210891 acacaaattcaaagtcaaagttactaatttaaacgtcttaacatgtgcaaat 40210840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 86 - 151
Target Start/End: Complemental strand, 15198984 - 15198919
Alignment:
Q  86 atttaatacaaaatattcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaat 151  Q
    ||||||| |||||||| |||||| ||||||||||||||||||| |||||| |||||||||||||||    
T  15198984 atttaattcaaaatatacaagttacaatgcaaagttactatttaaaattttttaacatgtgcaaat 15198919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 76 - 151
Target Start/End: Original strand, 297179 - 297254
Alignment:
Q  76 aaagttatacatttaatacaaaatattcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaat 151  Q
    ||||||||| ||| |||||||||| | |||||| |||| |||||||| ||||||||| ||||||||||||||||||    
T  297179 aaagttatatattaaatacaaaatgtacaagtttcaatacaaagttattattttaaacttcttaacatgtgcaaat 297254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 151
Target Start/End: Complemental strand, 4084712 - 4084562
Alignment:
Q  1 aacatgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattgaaatc-aacaattatttaacagaaagttatacatttaatacaaaat 99  Q
    |||||||| ||||||||||||||||||| || |||||||||||| |||| ||||||| | |||||||| |||  | ||| ||| | ||||||||  ||||    
T  4084712 aacatgtgtaatattgcacatgttaaggaaagtaaaagtagtaacttttcattgaaaactaacaattaattactaaaaatttacatatttaata-taaat 4084614  T
Q  100 attcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaat 151  Q
        ||||| |||  ||||||||||| ||||||||||||| |||||||||||    
T  4084613 gcataagtttcaagtcaaagttactactttaaatttcttatcatgtgcaaat 4084562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 151
Target Start/End: Complemental strand, 4103019 - 4102869
Alignment:
Q  1 aacatgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattgaaatc-aacaattatttaacagaaagttatacatttaatacaaaat 99  Q
    |||||||| ||||||||||||||||||| || |||||||||||| |||| ||||||| | |||||||| |||  | ||| ||| | ||||||||  ||||    
T  4103019 aacatgtgtaatattgcacatgttaaggaaagtaaaagtagtaacttttcattgaaaactaacaattaattactaaaaatttacatatttaata-taaat 4102921  T
Q  100 attcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaat 151  Q
        ||||| |||  ||||||||||| ||||||||||||| |||||||||||    
T  4102920 gcaaaagtttcaagtcaaagttactactttaaatttcttatcatgtgcaaat 4102869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 151
Target Start/End: Original strand, 31812121 - 31812272
Alignment:
Q  1 aacatgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattg-aaatcaacaattatttaacagaaagttatacatttaatacaaaat 99  Q
    ||||||||||| ||||||||||||||| || ||||||||||||| ||||||||| |||  || | |||||||  | |||| || | ||||||||  ||||    
T  31812121 aacatgtgcaacattgcacatgttaagatatctaaaagtagtaattttttattgaaaaataaaacttatttattaaaaagctacatatttaatatgaaat 31812220  T
Q  100 attcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaat 151  Q
       ||||||||||  |||| |||| |||||||| ||||||| ||||||||||    
T  31812221 gcacaagttccaagtcaaaattaccattttaaacttcttaatatgtgcaaat 31812272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 151
Target Start/End: Original strand, 38843712 - 38843863
Alignment:
Q  1 aacatgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttatt-gaaatcaacaattatttaacagaaagttatacatttaatacaaaat 99  Q
    ||||||||||| ||||||||||||||   |||||| |||||||| ||||| || |||| |||||||||||||    |||||| || ||||||||  ||||    
T  38843712 aacatgtgcaacattgcacatgttaaaacaactaatagtagtaactttttcttggaaaacaacaattatttattcaaaagttttatatttaatattaaat 38843811  T
Q  100 attcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaat 151  Q
     | |||||||||||  ||| ||  ||||||||| |||||| |||||||||||    
T  38843812 gtacaagttccaataaaaaatttatattttaaacttcttagcatgtgcaaat 38843863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 151
Target Start/End: Original strand, 45005978 - 45006128
Alignment:
Q  1 aacatgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttatt-gaaatcaacaattatttaacagaaagttatacatttaatacaaaat 99  Q
    ||||||||||| ||||||||||||||   |||||| |||||||| ||||| || |||| |||||||||||||    |||||| || ||||||||  | ||    
T  45005978 aacatgtgcaacattgcacatgttaaaacaactaatagtagtaactttttcttggaaaacaacaattatttattcaaaagttttatatttaatattagat 45006077  T
Q  100 attcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaat 151  Q
     | || |||||||| |||| || |||||||||| ||||||||||||||||||    
T  45006078 gtacatgttccaatacaaaatt-ctattttaaacttcttaacatgtgcaaat 45006128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 34 - 151
Target Start/End: Original strand, 44091360 - 44091477
Alignment:
Q  34 aaaagtagtaagtttttattgaaatcaacaattatttaacagaaagttatacatttaatacaaaatattcaagttccaatgcaaagttactattttaaat 133  Q
    ||||||| ||| |||||||||||| |||||||||||||  | |||  || | |||||||| |||||   ||||||| ||  ||||||||||| |||||||    
T  44091360 aaaagtattaattttttattgaaaacaacaattatttattaaaaaactacaaatttaatataaaatgcacaagttctaaatcaaagttactactttaaat 44091459  T
Q  134 ttcttaacatgtgcaaat 151  Q
    |||||||||| |||||||    
T  44091460 ttcttaacatatgcaaat 44091477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 33514670 - 33514614
Alignment:
Q  1 aacatgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattgaaa 57  Q
    |||||||||||||||||||||||||||| |||||||||||| ||  |||||||||||    
T  33514670 aacatgtgcaatattgcacatgttaaggaaactaaaagtagcaaccttttattgaaa 33514614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 38527829 - 38527885
Alignment:
Q  1 aacatgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattgaaa 57  Q
    |||||||||||||||||||||||||||| ||||||||||| ||| |||| |||||||    
T  38527829 aacatgtgcaatattgcacatgttaaggcaactaaaagtaataacttttcattgaaa 38527885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 5 - 49
Target Start/End: Original strand, 39703466 - 39703510
Alignment:
Q  5 tgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttt 49  Q
    |||||||||||||||||||||||||||||||||||||||| ||||    
T  39703466 tgtgcaatattgcacatgttaaggtaactaaaagtagtaactttt 39703510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 151
Target Start/End: Original strand, 6818025 - 6818176
Alignment:
Q  1 aacatgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattgaaatc-aacaattatttaacagaaagttatacatttaatacaaaat 99  Q
    |||||||||||||||| | ||||||| | |||||||| |||||| |||  |||||||   ||||||||||||  | |||||| || | |||||| |||||    
T  6818025 aacatgtgcaatattgtatatgttaaaggaactaaaaatagtaactttacattgaaaaagaacaattatttattaaaaagttttatagttaatataaaat 6818124  T
Q  100 attcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaat 151  Q
       |||||||| || |||  ||||||||||||| |||||||||||| |||||    
T  6818125 gcacaagttccgatacaattttactattttaaacttcttaacatgtacaaat 6818176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 151
Target Start/End: Original strand, 26834569 - 26834720
Alignment:
Q  1 aacatgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattgaaat-caacaattatttaacagaaagttatacatttaatacaaaat 99  Q
    ||||| ||||| |||||||||| |||| || ||||||||||||| ||||||||||||  ||| | |||||||  | |||| || | ||||||||  ||||    
T  26834569 aacatatgcaacattgcacatgctaagatatctaaaagtagtaattttttattgaaaaacaaaacttatttattaaaaagctacatatttaatatgaaat 26834668  T
Q  100 attcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaat 151  Q
       ||||||||||  |||| |||| |||||||||||||||| || |||||||    
T  26834669 gcacaagttccaagtcaaaattaccattttaaatttcttaatatatgcaaat 26834720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 151
Target Start/End: Complemental strand, 28015026 - 28014877
Alignment:
Q  1 aacatgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattgaaatcaacaattatttaacagaaagttatacatttaatacaaaata 100  Q
    |||||||||||| || |||| |||||  ||||| |  | ||||| ||||| || ||| |||||||||||||    |||||| || ||||||||  ||||     
T  28015026 aacatgtgcaatgttacacaagttaaaataacttattgcagtaacttttttttaaaa-caacaattatttattcaaaagttttatatttaatattaaatg 28014928  T
Q  101 ttcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaat 151  Q
    | ||||||||||| |||| || |||||||||| ||||||||||||||||||    
T  28014927 tacaagttccaatacaaaatttctattttaaacttcttaacatgtgcaaat 28014877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 62 - 151
Target Start/End: Complemental strand, 7393352 - 7393264
Alignment:
Q  62 caattatttaacagaaagttatacatttaatacaaaatattcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaat 151  Q
    ||||||||||  | ||||||||| |||||||| ||||||  |||||| |||  |||| |||||||||||||||| |||||||||||||||    
T  7393352 caattatttattaaaaagttatatatttaatataaaatacacaagttacaagacaaa-ttactattttaaattttttaacatgtgcaaat 7393264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 17 - 151
Target Start/End: Original strand, 5573312 - 5573445
Alignment:
Q  17 cacatgttaaggtaactaaaagtagtaagtttttattgaaat-caacaattatttaacagaaagttatacatttaatacaaaatattcaagttccaatgc 115  Q
    ||||||||||  ||||||||| ||  |||||||||||||||  ||||||| |||||  | ||||||||| ||  |||||||||| |  |||||| |||||    
T  5573312 cacatgttaaaataactaaaaataacaagtttttattgaaaaacaacaatcatttattaaaaagttatatat--aatacaaaatgtataagttctaatgc 5573409  T
Q  116 aaagttactattttaaatttcttaacatgtgcaaat 151  Q
    |||  || ||||||||| |||||||||||| |||||    
T  5573410 aaaagtattattttaaacttcttaacatgtacaaat 5573445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 7750676 - 7750732
Alignment:
Q  1 aacatgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattgaaa 57  Q
    ||||||||||||||||||||||||||   |||||||||||| || ||||||||||||    
T  7750676 aacatgtgcaatattgcacatgttaaaacaactaaaagtagcaactttttattgaaa 7750732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 8284739 - 8284687
Alignment:
Q  1 aacatgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttatt 53  Q
    |||||||||| ||||||||||||||| | ||||||||||||||| ||||||||    
T  8284739 aacatgtgcagtattgcacatgttaaagcaactaaaagtagtaactttttatt 8284687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 151
Target Start/End: Complemental strand, 12189758 - 12189607
Alignment:
Q  1 aacatgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattgaaat-caacaattatttaa-cagaaagttatacatttaatacaaaa 98  Q
    ||||||||||  ||||||||||||||   |||||| |||| ||| ||||| ||||||  |||||||||||||  || ||| || || ||||||||  |||    
T  12189758 aacatgtgcagcattgcacatgttaaaacaactaagagtattaactttttcttgaaaaacaacaattatttattcaaaaaatt-tatatttaatattaaa 12189660  T
Q  99 tattcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaat 151  Q
    | | |||||||||||  |||||| |||||||||| |||||| |||||||||||    
T  12189659 tgtacaagttccaatataaagtttctattttaaacttcttatcatgtgcaaat 12189607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 151
Target Start/End: Complemental strand, 12434186 - 12434035
Alignment:
Q  1 aacatgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattgaaat-caacaattatttaa-cagaaagttatacatttaatacaaaa 98  Q
    ||||||||||  ||||||||||||||   |||||| |||| ||| ||||| ||||||  |||||||||||||  || ||| || || ||||||||  |||    
T  12434186 aacatgtgcagcattgcacatgttaaaacaactaagagtattaactttttcttgaaaaacaacaattatttattcaaaaaatt-tatatttaatattaaa 12434088  T
Q  99 tattcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaat 151  Q
    | | |||||||||||  |||||| |||||||||| |||||| |||||||||||    
T  12434087 tgtacaagttccaatataaagtttctattttaaacttcttatcatgtgcaaat 12434035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 15 - 151
Target Start/End: Complemental strand, 39025012 - 39024876
Alignment:
Q  15 tgcacatgttaaggtaactaaaagtagtaagtttttattgaaatcaacaattatttaacagaaagttatacatttaatacaaaatattcaagttccaatg 114  Q
    ||||||| | |||| ||||||||||| ||| |||||||||||| ||||||||| |||  | |||  || | | |||||| |||||   ||| ||||||      
T  39025012 tgcacatctaaaggcaactaaaagtaataactttttattgaaaccaacaattaattattaaaaatctacatagttaatataaaatgcacaaattccaagt 39024913  T
Q  115 caaagttactattttaaatttcttaacatgtgcaaat 151  Q
    ||||||||||| |||||| |||||| |||||||||||    
T  39024912 caaagttactactttaaacttcttatcatgtgcaaat 39024876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 20 - 71
Target Start/End: Original strand, 45516316 - 45516367
Alignment:
Q  20 atgttaaggtaactaaaagtagtaagtttttattgaaatcaacaattattta 71  Q
    |||||||| |||||||||||||||| ||||||||||||  ||||||||||||    
T  45516316 atgttaagataactaaaagtagtaactttttattgaaactaacaattattta 45516367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 124
Target Start/End: Complemental strand, 11117167 - 11117051
Alignment:
Q  1 aacatgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattgaaatcaacaattatttaac-agaaagttatacatttaatacaaaat 99  Q
    |||||||||||||||||||||||||| | |||||||| |       |||||||||||  ||||||||||||   | ||||||||||||||||||||||||    
T  11117167 aacatgtgcaatattgcacatgttaaagcaactaaaatt-------ttttattgaaaa-aacaattatttatgtaaaaagttatacatttaatacaaaat 11117076  T
Q  100 attcaagttccaatgcaaagttact 124  Q
    ||  |||||| |||  |||||||||    
T  11117075 atataagttctaataaaaagttact 11117051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 151
Target Start/End: Complemental strand, 27874849 - 27874700
Alignment:
Q  1 aacatgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattgaaatcaacaattatttaacagaaagttatacatttaatacaaaata 100  Q
    |||||||||||| || |||| |||||  ||||| |  | ||||| ||||| || ||| |||||||||||||    |||||| || ||||||||  ||||     
T  27874849 aacatgtgcaatgttacacaagttaaaataacttattgcagtaacttttttttaaaa-caacaattatttattcaaaagttttatatttaatattaaatg 27874751  T
Q  101 ttcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaat 151  Q
    | ||||||||||| |||| ||  ||||||||| ||||||||||||||||||    
T  27874750 tacaagttccaatacaaaatttgtattttaaacttcttaacatgtgcaaat 27874700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 48 - 146
Target Start/End: Original strand, 35583423 - 35583520
Alignment:
Q  48 tttattgaaatcaacaattatttaacagaaagttatacatttaatacaaaatattcaagttccaatgcaaagttactattttaaatttcttaacatgtg 146  Q
    |||||||||| ||||||||||||   | ||| ||||| |||||||||||||||  |||||| ||||| ||| ||| ||||||||| ||||| |||||||    
T  35583423 tttattgaaaacaacaattatttgttaaaaa-ttatatatttaatacaaaatacacaagtttcaatgtaaacttaatattttaaacttcttcacatgtg 35583520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 30 - 151
Target Start/End: Original strand, 39430522 - 39430645
Alignment:
Q  30 aactaaaagtagtaagtttttattgaaatcaa---caattatttaacagaaagttatacatttaatacaaaatattcaagttccaatgcaaagttactat 126  Q
    |||||||||||||||||||| |||||||  ||   ||||||||||  | ||| |||||||||||||| |||||||  || ||  |||  |||||||||||    
T  39430522 aactaaaagtagtaagttttgattgaaaaaaaaaacaattatttattaaaaa-ttatacatttaatataaaatatataaattttaatataaagttactat 39430620  T
Q  127 tttaaatttcttaacatgtgcaaat 151  Q
    || ||| || |||||||||||||||    
T  39430621 ttaaaactttttaacatgtgcaaat 39430645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 4 - 151
Target Start/End: Complemental strand, 9580276 - 9580128
Alignment:
Q  4 atgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttatt-gaaatcaacaattattta-acagaaagttatacatttaatacaaaatat 101  Q
    |||||||| ||||||||||||||   |||||| |||||||| ||||| || |||| |||||||||||||  || |||  | || ||||||||  |||| |    
T  9580276 atgtgcaacattgcacatgttaaaacaactaatagtagtaactttttcttggaaaacaacaattatttattcaaaaaaat-tatatttaatattaaatgt 9580178  T
Q  102 tcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaat 151  Q
     |||||| |||| |||| || |||||||||| ||||||||||||| ||||    
T  9580177 acaagtttcaatacaaaatttctattttaaacttcttaacatgtgtaaat 9580128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 14 - 151
Target Start/End: Complemental strand, 40226146 - 40226006
Alignment:
Q  14 ttgcacatgttaaggtaactaaaagtagtaagt--ttttattgaaat-caacaattatttaacagaaagttatacatttaatacaaaatattcaagttcc 110  Q
    ||||||||||||| | || |||||||||| |||  |||||||||||  |||||||||||||    ||| ||||| ||||| |||||||| |  || || |    
T  40226146 ttgcacatgttaaagcaattaaaagtagttagtgtttttattgaaaaacaacaattatttatttaaaaattatatatttattacaaaatgtataaatttc 40226047  T
Q  111 aatgcaaagttactattttaaatttcttaacatgtgcaaat 151  Q
    |||||||| || | ||| |||| ||||||||||||||||||    
T  40226046 aatgcaaaatttcaattataaacttcttaacatgtgcaaat 40226006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 103 - 151
Target Start/End: Complemental strand, 14961730 - 14961682
Alignment:
Q  103 caagttccaatgcaaagttactattttaaatttcttaacatgtgcaaat 151  Q
    ||||||||||| |||| ||||||||||||| |||||| |||||||||||    
T  14961730 caagttccaatacaaaattactattttaaacttcttagcatgtgcaaat 14961682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 40716283 - 40716321
Alignment:
Q  1 aacatgtgcaatattgcacatgttaaggtaactaaaagt 39  Q
    ||||||||||||||||||||||||||  |||||||||||    
T  40716283 aacatgtgcaatattgcacatgttaatctaactaaaagt 40716321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 106 - 151
Target Start/End: Complemental strand, 18567480 - 18567435
Alignment:
Q  106 gttccaatgcaaagttactattttaaatttcttaacatgtgcaaat 151  Q
    |||||||  ||||||||||| |||||| ||||||||||||||||||    
T  18567480 gttccaagtcaaagttactaatttaaacttcttaacatgtgcaaat 18567435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 1203610 - 1203666
Alignment:
Q  1 aacatgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattgaaa 57  Q
    ||||| ||||||||||||||| ||||| |||||||||  ||||| |||| |||||||    
T  1203610 aacatatgcaatattgcacatattaagataactaaaaaaagtaacttttcattgaaa 1203666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 103 - 151
Target Start/End: Original strand, 6141759 - 6141807
Alignment:
Q  103 caagttccaatgcaaagttactattttaaatttcttaacatgtgcaaat 151  Q
    ||||||| |||| ||| ||||||||||||||||| ||| ||||||||||    
T  6141759 caagttctaatgtaaaattactattttaaatttcctaatatgtgcaaat 6141807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 10543798 - 10543742
Alignment:
Q  1 aacatgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattgaaa 57  Q
    |||||||||||  |||||||||||||||  |||||||| || || ||||||||||||    
T  10543798 aacatgtgcaaatttgcacatgttaaggatactaaaagaagcaactttttattgaaa 10543742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 13496902 - 13496866
Alignment:
Q  1 aacatgtgcaatattgcacatgttaaggtaactaaaa 37  Q
    |||||||||||||||||||||||||| | ||||||||    
T  13496902 aacatgtgcaatattgcacatgttaaaggaactaaaa 13496866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 16586891 - 16586835
Alignment:
Q  1 aacatgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattgaaa 57  Q
    |||||||||||  |||||||||||||||  |||||||| || || ||||||||||||    
T  16586891 aacatgtgcaaatttgcacatgttaaggatactaaaagaagcaactttttattgaaa 16586835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 42781483 - 42781539
Alignment:
Q  1 aacatgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattgaaa 57  Q
    |||||||||||  |||||||||||||||  |||||||| || || ||||||||||||    
T  42781483 aacatgtgcaaatttgcacatgttaaggatactaaaagaagcaactttttattgaaa 42781539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 42781644 - 42781589
Alignment:
Q  1 aacatgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattgaaa 57  Q
    |||||||||||  |||||||||||||||  ||| |||||||||||||| ||||||||    
T  42781644 aacatgtgcaaatttgcacatgttaaggatact-aaagtagtaagtttatattgaaa 42781589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 127; Significance: 2e-65; HSPs: 43)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 1 - 151
Target Start/End: Original strand, 33342997 - 33343147
Alignment:
Q  1 aacatgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattgaaatcaacaattatttaacagaaagttatacatttaatacaaaata 100  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||| ||||||||| ||||||||||||||     
T  33342997 aacatgtgcaatattgcacatgttaaggtaactaaaagtagcaagtttttattgaaaccaacaattatttaacaaaaagttatatatttaatacaaaatg 33343096  T
Q  101 ttcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaat 151  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  33343097 ttcaagttccaatacaaagttactattttaaatttcttaacatgtgcaaat 33343147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 1 - 151
Target Start/End: Original strand, 46290019 - 46290169
Alignment:
Q  1 aacatgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattgaaatcaacaattatttaacagaaagttatacatttaatacaaaata 100  Q
    ||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||| ||||||||| ||||||||||||||     
T  46290019 aacatgtgcaaaattgcacatgttaaggtaactaaaagtagcaagtttttattgaaaccaacaattatttaacaaaaagttatatatttaatacaaaatg 46290118  T
Q  101 ttcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaat 151  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  46290119 ttcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaat 46290169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 1 - 151
Target Start/End: Original strand, 34270274 - 34270420
Alignment:
Q  1 aacatgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattgaaatcaacaattatttaacagaaagttatacatttaatacaaaata 100  Q
    ||||||||||||||||||||||||||||||||||||||    ||||||||||||||| |||||||||||||||| ||||||||| ||||||||||||||     
T  34270274 aacatgtgcaatattgcacatgttaaggtaactaaaag----aagtttttattgaaaccaacaattatttaacaaaaagttatatatttaatacaaaatg 34270369  T
Q  101 ttcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaat 151  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34270370 ttcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaat 34270420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 63 - 151
Target Start/End: Original strand, 33072052 - 33072140
Alignment:
Q  63 aattatttaacagaaagttatacatttaatacaaaatattcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaat 151  Q
    |||||||||||| ||||||||| |||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||| |||||    
T  33072052 aattatttaacaaaaagttatatatttaatacaaaatgttcaaattccaatgcaaagttactattttaaatttcttaacatgtacaaat 33072140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 1 - 151
Target Start/End: Original strand, 9331970 - 9332120
Alignment:
Q  1 aacatgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattg-aaatcaacaattatttaacagaaagttatacatttaatacaaaat 99  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||| |||| ||||||||||||||| |  | || |||| | |||||||| ||||     
T  9331970 aacatgtgcaatattgcacatgttaaggtaactaaaagtagtaacttttcattgaaaatcaacaattattgatta-aatgttacatatttaatataaaaa 9332068  T
Q  100 attcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaat 151  Q
    |  |||||| |||  ||||||||||| |||||| ||||||||||||||||||    
T  9332069 acacaagtttcaagtcaaagttactaatttaaacttcttaacatgtgcaaat 9332120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 1 - 151
Target Start/End: Original strand, 19889349 - 19889499
Alignment:
Q  1 aacatgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattg-aaatcaacaattatttaacagaaagttatacatttaatacaaaat 99  Q
    |||||||||||||||||||||||||||| ||||||||||||||| |||| |||| ||| |||||||||||||  | ||||||| | |||||||| ||||     
T  19889349 aacatgtgcaatattgcacatgttaaggcaactaaaagtagtaacttttcattgaaaaccaacaattatttatta-aaagttacatatttaatataaaaa 19889447  T
Q  100 attcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaat 151  Q
    |  ||||||||||  ||||||||||| |||||| |||||| |||||||||||    
T  19889448 acacaagttccaagtcaaagttactactttaaacttcttatcatgtgcaaat 19889499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 13 - 151
Target Start/End: Complemental strand, 8091470 - 8091331
Alignment:
Q  13 attgcacatgttaaggtaactaaaagtagtaagtttttattgaaa-tcaacaattatttaacagaaagttatacatttaatacaaaatattcaagttcca 111  Q
    ||||||||||| || | |||||||||||| || |||||||||||| |||| |||||||||  | ||||||||| |||||| ||||||| |  ||||| ||    
T  8091470 attgcacatgtcaaagcaactaaaagtagcaaatttttattgaaaatcaataattatttattaaaaagttatatatttaacacaaaatgtaaaagttaca 8091371  T
Q  112 atgcaaagttactattttaaatttcttaacatgtgcaaat 151  Q
    ||||||||||||||||||||| ||||||||||||| ||||    
T  8091370 atgcaaagttactattttaaacttcttaacatgtgtaaat 8091331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 1 - 151
Target Start/End: Complemental strand, 39757279 - 39757129
Alignment:
Q  1 aacatgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattg-aaatcaacaattatttaacagaaagttatacatttaatacaaaat 99  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||| |||| ||||||||||||||| |  | |||| || | |||||||| ||||     
T  39757279 aacatgtgcaatattgcacatgttaaggtaactaaaagtagtaatttttcattgaaaatcaacaattattgatta-aaagctacatatttaatataaaaa 39757181  T
Q  100 attcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaat 151  Q
    |  ||| || |||   ||||||||||||||||| ||||||||||||||||||    
T  39757180 acacaaatttcaagttaaagttactattttaaacttcttaacatgtgcaaat 39757129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 151
Target Start/End: Original strand, 7170011 - 7170161
Alignment:
Q  1 aacatgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattgaaatcaacaattatttaacagaaagttatacatttaatacaaaata 100  Q
    |||||||||||||||||||||||||||| |||||||| |||||| |||||||||||| ||||||||| |||  | |||  || | | |||||| |||||     
T  7170011 aacatgtgcaatattgcacatgttaaggcaactaaaaatagtaactttttattgaaaccaacaattaattattaaaaatctacataattaatataaaatg 7170110  T
Q  101 ttcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaat 151  Q
      ||||||||||  ||||||||||| |||||| |||||| |||||||||||    
T  7170111 cacaagttccaagtcaaagttactactttaaacttcttatcatgtgcaaat 7170161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 1 - 151
Target Start/End: Complemental strand, 23982925 - 23982774
Alignment:
Q  1 aacatgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattgaaatc-aacaattatttaacagaaagttatacatttaatacaaaat 99  Q
    |||||||||||||||  ||||||||||| ||||||||||||||| |||| ||| ||| | |||||||| |||  | ||| ||| | |||||||| |||||    
T  23982925 aacatgtgcaatattatacatgttaaggcaactaaaagtagtaacttttcattcaaaaccaacaattaattattaaaaacttaaatatttaatataaaat 23982826  T
Q  100 attcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaat 151  Q
    |  ||||||||||  ||||||||||| ||||||||||||||| |||||||||    
T  23982825 acacaagttccaagtcaaagttactactttaaatttcttaacgtgtgcaaat 23982774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 1 - 151
Target Start/End: Complemental strand, 25709569 - 25709418
Alignment:
Q  1 aacatgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattga-aatcaacaattatttaacagaaagttatacatttaatacaaaat 99  Q
    |||||||| |||||||||||||||||   ||||||||||||||| |||||||||| || ||||||| |||||  | |||| ||   ||||||||  ||||    
T  25709569 aacatgtgaaatattgcacatgttaaatcaactaaaagtagtaattttttattgataaacaacaataatttattaaaaagctacctatttaatatgaaat 25709470  T
Q  100 attcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaat 151  Q
       ||||||||||| |||||||||||||||||| ||||||||||||||||||    
T  25709469 gaacaagttccaatacaaagttactattttaaacttcttaacatgtgcaaat 25709418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 1 - 151
Target Start/End: Complemental strand, 5909451 - 5909301
Alignment:
Q  1 aacatgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattg-aaatcaacaattatttaacagaaagttatacatttaatacaaaat 99  Q
    |||||||||||||||||||||||||||| ||||||||| ||||| |||| |||| ||| |||||||||||||  | |||| || | |||||||| ||||     
T  5909451 aacatgtgcaatattgcacatgttaaggcaactaaaagcagtaacttttcattgaaaaccaacaattatttatta-aaagctacatatttaatataaaaa 5909353  T
Q  100 attcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaat 151  Q
    |  |||||| |||  ||||||||||| |||||| |||||| |||||||||||    
T  5909352 acacaagtttcaagtcaaagttactactttaaacttcttatcatgtgcaaat 5909301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 19868122 - 19868257
Alignment:
Q  1 aacatgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattg-aaatcaacaattatttaacagaaagttatacatttaatacaaaat 99  Q
    |||||||||||||||||||||||||||  ||||||||||||||| |||| |||| ||| || |||||||||| || ||||||||| |||||||| |||||    
T  19868122 aacatgtgcaatattgcacatgttaagacaactaaaagtagtaaattttcattgaaaaacaccaattatttatcaaaaagttatatatttaatataaaat 19868221  T
Q  100 attcaagttccaatgcaaagttactattttaaattt 135  Q
    |  |||||| |||  |||| |||| ||| |||||||    
T  19868222 acacaagtttcaagacaaacttaccattctaaattt 19868257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 76 - 151
Target Start/End: Original strand, 26300655 - 26300730
Alignment:
Q  76 aaagttatacatttaatacaaaatattcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaat 151  Q
    |||||||||||||||||||||||||| |||||| |||| |||||||||||||||||| || |||||||||||||||    
T  26300655 aaagttatacatttaatacaaaatatacaagtttcaattcaaagttactattttaaactttttaacatgtgcaaat 26300730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 1 - 151
Target Start/End: Complemental strand, 36548629 - 36548479
Alignment:
Q  1 aacatgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattg-aaatcaacaattatttaacagaaagttatacatttaatacaaaat 99  Q
    |||||||||||||||||||||||||||| ||||||||||||||| ||||||||| ||| ||||||||||| |  | ||  ||| | |||||||| ||||     
T  36548629 aacatgtgcaatattgcacatgttaagggaactaaaagtagtaattttttattgaaaaccaacaattattgatta-aatattacatatttaatataaaaa 36548531  T
Q  100 attcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaat 151  Q
    || ||| ||  ||  ||||||||||| |||||| ||||||||||||||||||    
T  36548530 atacaaattttaagtcaaagttactaatttaaacttcttaacatgtgcaaat 36548479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 1 - 151
Target Start/End: Complemental strand, 3562047 - 3561897
Alignment:
Q  1 aacatgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattg-aaatcaacaattatttaacagaaagttatacatttaatacaaaat 99  Q
    |||||||||||||||||||||||||||||||||||||| ||||| |||| |||| ||||||| ||||||| |  | |||| || | |||||||| ||||     
T  3562047 aacatgtgcaatattgcacatgttaaggtaactaaaagcagtaacttttcattgaaaatcaataattattgatta-aaagctacatatttaatataaaaa 3561949  T
Q  100 attcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaat 151  Q
    |  ||||||  ||   |||||||||| |||||| ||||||||||||||||||    
T  3561948 acacaagttttaagttaaagttactactttaaacttcttaacatgtgcaaat 3561897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 1 - 151
Target Start/End: Complemental strand, 47457631 - 47457480
Alignment:
Q  1 aacatgtgcaatattgcacatgttaaggtaactaaaagtagtaa-gtttttattgaaatcaacaattatttaacagaaagttatacatttaatacaaaat 99  Q
    ||||||||||||||||||||||||||   |||||||||||||||  ||||||||||||  ||||||||||||    |||| || |||| ||||| |||||    
T  47457631 aacatgtgcaatattgcacatgttaaaacaactaaaagtagtaatttttttattgaaaataacaattatttatttaaaagctacacatataatataaaat 47457532  T
Q  100 attcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaat 151  Q
        || ||||||  ||||||||||| ||||||||| |||||||||||||||    
T  47457531 gcataaattccaagtcaaagttactactttaaattttttaacatgtgcaaat 47457480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 1 - 151
Target Start/End: Complemental strand, 24463124 - 24462974
Alignment:
Q  1 aacatgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattgaaatcaacaattatttaacagaaagttatacatttaatacaaaata 100  Q
    |||||||| |||||| |||||||||||| ||||||||||||||| || ||||||||| |||||| ||||||  | |||  || | |||||||| |||||     
T  24463124 aacatgtgaaatatttcacatgttaaggcaactaaaagtagtaatttcttattgaaaacaacaagtatttattaaaaaactacatatttaatataaaatg 24463025  T
Q  101 ttcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaat 151  Q
    | |||  |  ||  |||||||| ||||||||| ||||||||||||||||||    
T  24463024 tacaaactttaagtcaaagttattattttaaacttcttaacatgtgcaaat 24462974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 1 - 132
Target Start/End: Complemental strand, 47120363 - 47120232
Alignment:
Q  1 aacatgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattg-aaatcaacaattatttaacagaaagttatacatttaatacaaaat 99  Q
    ||||||||||||||||||||||||| |||||||||||||||||| |||| |||| ||| ||||||||||| |  | || |||| | |||||||| ||||     
T  47120363 aacatgtgcaatattgcacatgttatggtaactaaaagtagtaatttttcattgaaaaccaacaattattgatta-aatgttacatatttaatataaaaa 47120265  T
Q  100 attcaagttccaatgcaaagttactattttaaa 132  Q
    |  ||||||||||  ||||||||||| ||||||    
T  47120264 acacaagttccaagtcaaagttactaatttaaa 47120232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 151
Target Start/End: Complemental strand, 12086100 - 12085950
Alignment:
Q  1 aacatgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattg-aaatcaacaattatttaacagaaagttatacatttaatacaaaat 99  Q
    |||||||| ||||||||||||||||||| ||||||||||||||| ||||  ||| |||||||||||||||||  | ||||||| | |||||||| ||||     
T  12086100 aacatgtgtaatattgcacatgttaaggcaactaaaagtagtaacttttcgttgaaaatcaacaattatttatta-aaagttaaatatttaatataaaaa 12086002  T
Q  100 attcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaat 151  Q
    |  |||||| |||  |||| |||||  |||||| ||||||  ||||||||||    
T  12086001 acacaagtttcaagtcaaaattacttatttaaacttcttattatgtgcaaat 12085950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 3 - 149
Target Start/End: Original strand, 12650831 - 12650977
Alignment:
Q  3 catgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattgaaatc-aacaattatttaacagaaagttatacatttaatacaaaatat 101  Q
    |||||||||||||| ||||||||||  |||||||| |||||| |||| ||||||| | | ||||||||||  | |||||||||  ||||| | ||||||     
T  12650831 catgtgcaatattgtacatgttaagccaactaaaaatagtaacttttcattgaaaactaccaattatttattaaaaagttata-ttttaacataaaatac 12650929  T
Q  102 tcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaa 149  Q
    | ||||| |||  |||| |||| |||||||||||||||||||||||||    
T  12650930 tgaagtttcaagacaaacttaccattttaaatttcttaacatgtgcaa 12650977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 151
Target Start/End: Original strand, 45501467 - 45501618
Alignment:
Q  1 aacatgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttatt-gaaatcaacaattatttaacagaaagttatacatttaatacaaaat 99  Q
    ||||||||||| ||||||||||||||  ||||||| |||||||| ||||| ||  ||| |||||||||||||    | |||| || ||||||||  ||||    
T  45501467 aacatgtgcaacattgcacatgttaaaataactaatagtagtaactttttcttaaaaaacaacaattatttattcaacagttttatatttaatattaaat 45501566  T
Q  100 attcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaat 151  Q
     | ||||||||||| |||| || |||||||||| ||||||| ||||||||||    
T  45501567 gtacaagttccaatacaaaatttctattttaaacttcttaagatgtgcaaat 45501618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 59 - 149
Target Start/End: Original strand, 41572286 - 41572372
Alignment:
Q  59 caacaattatttaacagaaagttatacatttaatacaaaatattcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaa 149  Q
    |||||||||||||  ||||||||||| ||||||||||||||||  ||||    ||||||||||||||||||||| || |||||||||||||    
T  41572286 caacaattatttattagaaagttatatatttaatacaaaatatataagt----atgcaaagttactattttaaactttttaacatgtgcaa 41572372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 151
Target Start/End: Original strand, 4969781 - 4969932
Alignment:
Q  1 aacatgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattg-aaatcaacaattatttaacagaaagttatacatttaatacaaaat 99  Q
    ||||||||||| ||||||||||||||   |||||| |||||||  ||||| ||| ||| | | |||||||||    |||||| || ||||||||  ||||    
T  4969781 aacatgtgcaacattgcacatgttaaaacaactaatagtagtagctttttcttggaaaactataattatttatttaaaagttttatatttaatattaaat 4969880  T
Q  100 attcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaat 151  Q
     | ||||||||||| |||| || |||||||||| ||||||||||||||||||    
T  4969881 gtacaagttccaatacaaaatttctattttaaacttcttaacatgtgcaaat 4969932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 24250322 - 24250393
Alignment:
Q  1 aacatgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattg-aaatcaacaattattta 71  Q
    |||||||||||||||||||||||||||| ||||||||||| ||| |||| |||| ||| |||||||||||||    
T  24250322 aacatgtgcaatattgcacatgttaaggaaactaaaagtattaacttttcattgaaaaccaacaattattta 24250393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 31 - 143
Target Start/End: Complemental strand, 47708024 - 47707911
Alignment:
Q  31 actaaaagtagtaagtttttattgaaat-caacaattatttaacagaaagttatacatttaatacaaaatattcaagttccaatgcaaagttactatttt 129  Q
    ||||||||||  ||| |||||| ||||  |||||||||||||  | ||||||||| |||||||||||||| |  ||||| |||| |||| ||||||||||    
T  47708024 actaaaagtaacaagattttatggaaaaacaacaattatttattaaaaagttatatatttaatacaaaatgtataagtttcaattcaaaattactatttt 47707925  T
Q  130 aaatttcttaacat 143  Q
    ||| ||||||||||    
T  47707924 aaacttcttaacat 47707911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 29 - 151
Target Start/End: Complemental strand, 384571 - 384449
Alignment:
Q  29 taactaaaagtagtaagtttttattgaaa-tcaacaattatttaacagaaagttatacatttaatacaaaatattcaagttccaatgcaaagttactatt 127  Q
    |||||||||||||||| |||| ||||||| |||||||||||| |  | |||| || | |||||||| |||| |  ||||||||||   |||||||||| |    
T  384571 taactaaaagtagtaacttttcattgaaaatcaacaattattgatta-aaagctacatatttaatataaaaaaaacaagttccaagttaaagttactact 384473  T
Q  128 ttaaatttcttaacatgtgcaaat 151  Q
    ||||| ||||||||||||||||||    
T  384472 ttaaacttcttaacatgtgcaaat 384449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 151
Target Start/End: Original strand, 32117823 - 32117973
Alignment:
Q  1 aacatgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttatt-gaaatcaacaattatttaacagaaagttatacatttaatacaaaat 99  Q
    |||||||||||||||||||||||||||| ||||||| |||| || |||  ||| |||| || |||||| |||  | ||||||||  |||||||| | |||    
T  32117823 aacatgtgcaatattgcacatgttaaggaaactaaatgtagcaactttgcattggaaaacaccaatta-ttattaaaaagttatctatttaatatagaat 32117921  T
Q  100 attcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaat 151  Q
    || |||||| |||   ||| || | | |||||||||||||||||||||||||    
T  32117922 atacaagtttcaagataaacttgccactttaaatttcttaacatgtgcaaat 32117973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 42750297 - 42750367
Alignment:
Q  1 aacatgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattgaaatcaacaattattta 71  Q
    |||||||||||||||||| ||||||| | |||||||| || ||| |||||||||||| ||| |||||||||    
T  42750297 aacatgtgcaatattgcatatgttaaagcaactaaaaataataactttttattgaaaacaataattattta 42750367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 4 - 151
Target Start/End: Original strand, 12624649 - 12624795
Alignment:
Q  4 atgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattgaaatcaa-caattatttaacagaaagttatacatttaatacaaaatatt 102  Q
    ||||||||||||  |||| ||||||||||||||| |||| | ||||||||||||   | ||||||||||  | ||| || || |||||||| ||||||      
T  12624649 atgtgcaatattatacatattaaggtaactaaaa-tagttattttttattgaaaaatatcaattatttattaaaaacttgtatatttaatataaaataca 12624747  T
Q  103 caagttccaatgcaaagttactattttaaatttcttaacatgtgcaaat 151  Q
    ||||||  ||  |||| |||| |||||||||||||||||||||||||||    
T  12624748 caagttt-aagacaaacttaccattttaaatttcttaacatgtgcaaat 12624795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 151
Target Start/End: Complemental strand, 7040421 - 7040271
Alignment:
Q  1 aacatgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattg-aaatcaacaattatttaacagaaagttatacatttaatacaaaat 99  Q
    ||||| ||||| |||||| ||||||| |||||||||||  | || | ||||||| ||| |||||||||||||  | ||| ||||| ||| |||| |||||    
T  7040421 aacatttgcaaaattgcatatgttaaagtaactaaaagcggcaactatttattggaaaacaacaattatttattaaaaatttatatatt-aatagaaaat 7040323  T
Q  100 attcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaat 151  Q
    |  ||||||||||  ||||  || || |||||| ||||||||||||||||||    
T  7040322 acacaagttccaaatcaaacatagtactttaaacttcttaacatgtgcaaat 7040271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 4161890 - 4161939
Alignment:
Q  1 aacatgtgcaatattgcacatgttaaggtaactaaaagtagtaagttttt 50  Q
    |||||||| ||||||||||||||||| | ||||||||||||||| |||||    
T  4161890 aacatgtgtaatattgcacatgttaaaggaactaaaagtagtaacttttt 4161939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 86 - 151
Target Start/End: Complemental strand, 29398218 - 29398153
Alignment:
Q  86 atttaatacaaaatattcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaat 151  Q
    ||||||||  |||| | ||||||||||| |||| || |||||||||| ||||||||||||||||||    
T  29398218 atttaatattaaatgtacaagttccaatacaaaatttctattttaaacttcttaacatgtgcaaat 29398153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 86 - 151
Target Start/End: Complemental strand, 41331540 - 41331475
Alignment:
Q  86 atttaatacaaaatattcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaat 151  Q
    |||||||| |||||   ||||||||||  ||||||||||| ||||||||||||| |||||||||||    
T  41331540 atttaatataaaatgcacaagttccaagtcaaagttactactttaaatttcttatcatgtgcaaat 41331475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 79 - 151
Target Start/End: Complemental strand, 7899577 - 7899505
Alignment:
Q  79 gttatacatttaatacaaaatattcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaat 151  Q
    |||||| |||||||| ||||||| ||||||  ||  |||| |||| ||||||||||| |||||||||||||||    
T  7899577 gttatatatttaatataaaatatacaagttataagacaaacttaccattttaaattttttaacatgtgcaaat 7899505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 39869131 - 39869187
Alignment:
Q  1 aacatgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattgaaa 57  Q
    ||||| |||||||||||||||||||| | |||||||| |||||| |||| |||||||    
T  39869131 aacatatgcaatattgcacatgttaaagaaactaaaaatagtaacttttcattgaaa 39869187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 103 - 151
Target Start/End: Original strand, 26037204 - 26037252
Alignment:
Q  103 caagttccaatgcaaagttactattttaaatttcttaacatgtgcaaat 151  Q
    ||||||||||| |||| || |||||||||| |||||||||| |||||||    
T  26037204 caagttccaatacaaaatttctattttaaacttcttaacatctgcaaat 26037252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 115 - 151
Target Start/End: Complemental strand, 26050516 - 26050480
Alignment:
Q  115 caaagttactattttaaatttcttaacatgtgcaaat 151  Q
    |||| |||| |||||||||||||||||||||||||||    
T  26050516 caaatttaccattttaaatttcttaacatgtgcaaat 26050480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 115 - 151
Target Start/End: Complemental strand, 26059875 - 26059839
Alignment:
Q  115 caaagttactattttaaatttcttaacatgtgcaaat 151  Q
    |||| |||| |||||||||||||||||||||||||||    
T  26059875 caaatttaccattttaaatttcttaacatgtgcaaat 26059839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 28061492 - 28061436
Alignment:
Q  1 aacatgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattgaaa 57  Q
    |||||||||||  |||||||||||||||  |||||||| || || ||||||||||||    
T  28061492 aacatgtgcaaatttgcacatgttaaggatactaaaagaagcaactttttattgaaa 28061436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 38798239 - 38798183
Alignment:
Q  1 aacatgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattgaaa 57  Q
    |||||||||||  |||||||||||||||  |||||||| || || ||||||||||||    
T  38798239 aacatgtgcaaatttgcacatgttaaggatactaaaagaagcaactttttattgaaa 38798183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 38798377 - 38798321
Alignment:
Q  1 aacatgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattgaaa 57  Q
    |||||||||||  |||||||||||||||  |||||||| || || ||||||||||||    
T  38798377 aacatgtgcaaatttgcacatgttaaggatactaaaagaagcaactttttattgaaa 38798321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 42593563 - 42593507
Alignment:
Q  1 aacatgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattgaaa 57  Q
    |||||||||||  |||||||||||||||  |||||||| || || ||||||||||||    
T  42593563 aacatgtgcaaatttgcacatgttaaggatactaaaagaagcaactttttattgaaa 42593507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 127; Significance: 2e-65; HSPs: 38)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 1 - 151
Target Start/End: Complemental strand, 14228295 - 14228145
Alignment:
Q  1 aacatgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattgaaatcaacaattatttaacagaaagttatacatttaatacaaaata 100  Q
    ||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||| |||||||||||||||| ||||||||| ||||||||||||||     
T  14228295 aacatgtgcaatattgcacatgttaaggtaattaaaagtagcaagtttttattgaaaccaacaattatttaacaaaaagttatatatttaatacaaaatg 14228196  T
Q  101 ttcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaat 151  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14228195 ttcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaat 14228145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 1 - 151
Target Start/End: Complemental strand, 28943938 - 28943788
Alignment:
Q  1 aacatgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattgaaatcaacaattatttaacagaaagttatacatttaatacaaaata 100  Q
    ||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||| |||||||||||||||| ||||||||| ||||||||||||||     
T  28943938 aacatgtgcaatattgcacatgttaaggtaattaaaagtagcaagtttttattgaaaccaacaattatttaacaaaaagttatatatttaatacaaaatg 28943839  T
Q  101 ttcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaat 151  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28943838 ttcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaat 28943788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 1 - 151
Target Start/End: Complemental strand, 17552756 - 17552606
Alignment:
Q  1 aacatgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattgaaatcaacaattatttaacagaaagttatacatttaatacaaaata 100  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||| |||| |||||||||||||||| ||| ||||| ||||||||||||||     
T  17552756 aacatgtgcaatattgcacatgttaaggtaactaaaagtagcaagtttttatcgaaaccaacaattatttaacaaaaaattatatatttaatacaaaatg 17552657  T
Q  101 ttcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaat 151  Q
    |||||||||||||||| | ||||||||||||||||||||||||||||||||    
T  17552656 ttcaagttccaatgcataattactattttaaatttcttaacatgtgcaaat 17552606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 1 - 151
Target Start/End: Original strand, 33017733 - 33017883
Alignment:
Q  1 aacatgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattgaaatcaacaattatttaacagaaagttatacatttaatacaaaata 100  Q
    ||||||||||||||||||||||||||||||||||||| ||| ||||||||||| ||| |||||||||||||||| ||||||||| ||||||||||||||     
T  33017733 aacatgtgcaatattgcacatgttaaggtaactaaaattagcaagtttttattaaaaccaacaattatttaacaaaaagttatatatttaatacaaaatg 33017832  T
Q  101 ttcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaat 151  Q
    |||||||||| |||||||||||||||||||||||| |||||||||||||||    
T  33017833 ttcaagttcctatgcaaagttactattttaaattttttaacatgtgcaaat 33017883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 14 - 151
Target Start/End: Complemental strand, 30591320 - 30591182
Alignment:
Q  14 ttgcacatgttaaggtaactaaaagtagtaagtttttattgaaatca-acaattatttaacagaaagttatacatttaatacaaaatattcaagttccaa 112  Q
    ||||||||||||| | ||||||| ||||||||||||||||||||  | ||||||||||| || |||||||||||||||||||||||||| |||||| |||    
T  30591320 ttgcacatgttaacgcaactaaatgtagtaagtttttattgaaaaaatacaattatttatcaaaaagttatacatttaatacaaaatatacaagttacaa 30591221  T
Q  113 tgcaaagttactattttaaatttcttaacatgtgcaaat 151  Q
    |||||| |||| |||| ||| ||||||||||||| ||||    
T  30591220 tgcaaaattaccatttaaaacttcttaacatgtgtaaat 30591182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 14 - 151
Target Start/End: Complemental strand, 31069738 - 31069601
Alignment:
Q  14 ttgcacatgttaaggtaactaaaagtagtaagtttttattg-aaatcaacaattatttaacagaaagttatacatttaatacaaaatattcaagttccaa 112  Q
    ||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||| |  | || |||| | |||||||| |||| |  ||||||||||    
T  31069738 ttgcacatgttaaggtaactaaaagtagtaagtttttattgaaaaccaacaattattgatta-aatgttacatatttaatataaaaaacacaagttccaa 31069640  T
Q  113 tgcaaagttactattttaaatttcttaacatgtgcaaat 151  Q
      ||||||||||| |||||| ||||||||||||| ||||    
T  31069639 gtcaaagttactaatttaaacttcttaacatgtgtaaat 31069601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 1 - 151
Target Start/End: Original strand, 10887037 - 10887188
Alignment:
Q  1 aacatgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattg-aaatcaacaattatttaacagaaagttatacatttaatacaaaat 99  Q
    ||||||||||| ||||||||||||||| || ||||||||||||| ||||||||| ||| ||| | |||||||  | |||| || | |||||||| |||||    
T  10887037 aacatgtgcaacattgcacatgttaagatatctaaaagtagtaattttttattgaaaaacaaaacttatttattaaaaagctacatatttaatataaaat 10887136  T
Q  100 attcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaat 151  Q
    |  ||||||||||  |||| |||| | |||||| ||||||||||||||||||    
T  10887137 acacaagttccaaatcaaaattaccactttaaacttcttaacatgtgcaaat 10887188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 150
Target Start/End: Complemental strand, 28757656 - 28757506
Alignment:
Q  1 aacatgtgcaatattgcacatgttaaggtaactaaaagtagt-aagtttttattgaaatcaacaattatttaacagaaagttatacatttaatacaaaat 99  Q
    |||||||| | ||||||||||||||| | || |||||||| | |||||||||||||||  | ||||||||||  | |||||||||||||||||| ||||     
T  28757656 aacatgtgtagtattgcacatgttaaagcaattaaaagtatttaagtttttattgaaaaaatcaattatttattaaaaagttatacatttaataaaaaaa 28757557  T
Q  100 attcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaa 150  Q
     | ||| ||| |||||||||||||||||| ||| || |||| |||||||||    
T  28757556 ttacaacttcaaatgcaaagttactatttaaaactttttaatatgtgcaaa 28757506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 12 - 140
Target Start/End: Complemental strand, 22974731 - 22974603
Alignment:
Q  12 tattgcacatgttaaggtaactaaaagtagtaagtttttattg-aaatcaacaattatttaacagaaagttatacatttaatacaaaatattcaagttcc 110  Q
    ||||||||||||||||||||||||||||||||| |||| |||| ||||||||||||||| |  | ||||||| | |||||||| |||| |  ||||||||    
T  22974731 tattgcacatgttaaggtaactaaaagtagtaacttttcattgaaaatcaacaattattgatta-aaagttacatatttaatataaaaaacacaagttcc 22974633  T
Q  111 aatgcaaagttactattttaaatttcttaa 140  Q
    ||   ||||||||||||||||| |||||||    
T  22974632 aagttaaagttactattttaaacttcttaa 22974603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 12 - 140
Target Start/End: Original strand, 23813670 - 23813798
Alignment:
Q  12 tattgcacatgttaaggtaactaaaagtagtaagtttttattg-aaatcaacaattatttaacagaaagttatacatttaatacaaaatattcaagttcc 110  Q
    ||||||||||||||||||||||||||||||||| |||| |||| ||||||||||||||| |  | ||||||| | |||||||| |||| |  ||||||||    
T  23813670 tattgcacatgttaaggtaactaaaagtagtaacttttcattgaaaatcaacaattattgatta-aaagttacatatttaatataaaaaacacaagttcc 23813768  T
Q  111 aatgcaaagttactattttaaatttcttaa 140  Q
    ||   ||||||||||||||||| |||||||    
T  23813769 aagttaaagttactattttaaacttcttaa 23813798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 1 - 151
Target Start/End: Complemental strand, 8977636 - 8977485
Alignment:
Q  1 aacatgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattg-aaatcaacaattatttaacagaaagttatacatttaatacaaaat 99  Q
    |||||||||||||||||||||||||||| |||||||||||| ||  ||| |||| ||| ||||||| |||||    ||||||| | |||||||| |||||    
T  8977636 aacatgtgcaatattgcacatgttaaggaaactaaaagtagcaacctttaattgaaaaacaacaatcatttattgaaaagttacatatttaatataaaat 8977537  T
Q  100 attcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaat 151  Q
       |||||| |||| |||| |||||||||| || ||||||||| ||||||||    
T  8977536 gcacaagttacaatacaaatttactattttgaacttcttaacaagtgcaaat 8977485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 5363062 - 5363006
Alignment:
Q  1 aacatgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattgaaa 57  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||| |||||||    
T  5363062 aacatgtgcaatattgcacatgttaaggtaactaaaagtagtaacttttcattgaaa 5363006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 151
Target Start/End: Complemental strand, 2830850 - 2830700
Alignment:
Q  1 aacatgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattg-aaatcaacaattatttaacagaaagttatacatttaatacaaaat 99  Q
    ||||||| || ||||||||||||||||||||||||||||||||| |||| |||| ||| ||||||||||| |  | |||| || | |||||||| ||||     
T  2830850 aacatgtacagtattgcacatgttaaggtaactaaaagtagtaacttttcattgaaaaccaacaattattgatta-aaagctacatatttaatataaaaa 2830752  T
Q  100 attcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaat 151  Q
    |  ||| ||| ||   ||||||| ||||||||| ||||||||||||||||||    
T  2830751 acacaaattctaaattaaagttattattttaaacttcttaacatgtgcaaat 2830700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 76 - 151
Target Start/End: Complemental strand, 28756639 - 28756564
Alignment:
Q  76 aaagttatacatttaatacaaaatattcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaat 151  Q
    ||||||||||| ||||||||| |||| ||| |||||||||||||||||||||| ||| ||||||| ||||||||||    
T  28756639 aaagttatacaattaatacaagatatgcaacttccaatgcaaagttactatttaaaacttcttaaaatgtgcaaat 28756564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 151
Target Start/End: Original strand, 34692362 - 34692513
Alignment:
Q  1 aacatgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattg-aaatcaacaattatttaacagaaagttatacatttaatacaaaat 99  Q
    ||||||||||| ||||||||||||||   |||||| |||||||| ||||| ||| ||| | | |||||||||    |||||| || ||||||||  ||||    
T  34692362 aacatgtgcaacattgcacatgttaaaacaactaatagtagtaactttttcttggaaaactataattatttatttaaaagttttatatttaatattaaat 34692461  T
Q  100 attcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaat 151  Q
     | ||||||||||| |||| || |||||||||| ||||||||||||||||||    
T  34692462 gtacaagttccaatacaaaatttctattttaaacttcttaacatgtgcaaat 34692513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 151
Target Start/End: Complemental strand, 28759184 - 28759033
Alignment:
Q  1 aacatgtgcaatattgcacatgttaaggtaactaaaagtagt-aagtttttattgaaatcaa-caattatttaacagaaagttatacatttaatacaaaa 98  Q
    |||||||||| || ||||| |||||| | || |||||||| | |||||||||||||    || ||||||||||  | |||||||||||||||||||||||    
T  28759184 aacatgtgcattactgcacgtgttaaagcaattaaaagtatttaagtttttattgacgaaaatcaattatttatta-aaagttatacatttaatacaaaa 28759086  T
Q  99 tattcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaat 151  Q
    ||| ||| ||  |||||||||||| ||||  ||| ||||||||||||||||||    
T  28759085 tatacaacttttaatgcaaagttattattcaaaacttcttaacatgtgcaaat 28759033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 151
Target Start/End: Original strand, 6016864 - 6017015
Alignment:
Q  1 aacatgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattg-aaatcaacaattatttaacagaaagttatacatttaatacaaaat 99  Q
    ||||||||||| |||||||||| ||||  | ||||||||||||| |||| |||| ||| ||||| ||||||   | ||||||||| ||||||||  ||||    
T  6016864 aacatgtgcaacattgcacatggtaagacatctaaaagtagtaacttttcattgaaaaacaacacttattttttaaaaagttatatatttaatatgaaat 6016963  T
Q  100 attcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaat 151  Q
       ||||||||||  ||||||||| | |||||| || |||||||||||||||    
T  6016964 gcacaagttccaagtcaaagttaccactttaaactttttaacatgtgcaaat 6017015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 151
Target Start/End: Original strand, 12454074 - 12454224
Alignment:
Q  1 aacatgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattgaaatcaacaattatttaacagaaagttatacatttaatacaaaata 100  Q
    |||||||||||||||||||||||||||  || |||| ||||||| |||||||||||| || |||||| |    | |||||| |  |||||||| | ||||    
T  12454074 aacatgtgcaatattgcacatgttaagaaaattaaatgtagtaattttttattgaaaacatcaattactatttaaaaagttgtctatttaatatagaata 12454173  T
Q  101 ttcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaat 151  Q
      ||||||||||  | || |||| ||||||||||| |||| ||||||||||    
T  12454174 cacaagttccaaaaccaatttaccattttaaattttttaaaatgtgcaaat 12454224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 151
Target Start/End: Original strand, 31503751 - 31503901
Alignment:
Q  1 aacatgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattgaaatcaacaatt---atttaacagaaagttatacatttaatacaaa 97  Q
    |||||||||||  |||||||||||||||  |||||||| || || ||||||||||||   ||| ||   ||| || ||||   |||| |||||||| |||    
T  31503751 aacatgtgcaaatttgcacatgttaaggatactaaaagaagcaactttttattgaaaatcacagttgttattaaaaagaa---tatatatttaatataaa 31503847  T
Q  98 atattcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaat 151  Q
    |||  |||||||||||  ||| |||||| |||||||||||||||||||||||||    
T  31503848 atacacaagttccaatataaacttactactttaaatttcttaacatgtgcaaat 31503901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 18332858 - 18332802
Alignment:
Q  1 aacatgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattgaaa 57  Q
    ||||||||||| ||||||||||||||| || ||||||||||||| ||||||||||||    
T  18332858 aacatgtgcaacattgcacatgttaagatatctaaaagtagtaattttttattgaaa 18332802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 151
Target Start/End: Complemental strand, 1017948 - 1017797
Alignment:
Q  1 aacatgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattgaaatc-aacaattatttaacagaaagttatacatttaatacaaaat 99  Q
    ||||||||||||| |||||||| | |  |||||||||||||||| ||||  |||||| | ||||||||||||  | ||| ||| | |||||||| |||||    
T  1017948 aacatgtgcaatactgcacatgattaaataactaaaagtagtaacttttcgttgaaaaccaacaattatttattaaaaatttacatatttaatataaaat 1017849  T
Q  100 attcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaat 151  Q
       ||| || |||  ||||||||||| |||||| ||||||||||||| ||||    
T  1017848 gcacaactttcaagtcaaagttactactttaaacttcttaacatgtgtaaat 1017797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 1814951 - 1814880
Alignment:
Q  1 aacatgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattgaaatcaacaattatttaa 72  Q
    |||||||||||||||||||||||||| | |||||||||||  |  |||||||||||| ||| ||||||||||    
T  1814951 aacatgtgcaatattgcacatgttaaagcaactaaaagtaacatatttttattgaaaacaataattatttaa 1814880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 151
Target Start/End: Complemental strand, 29863472 - 29863321
Alignment:
Q  1 aacatgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattg-aaatcaacaattatttaacagaaagttatacatttaatacaaaat 99  Q
    |||||||||||||||||||||||||| | |||||||| |||||| |||  |||| |||  || |||||||||  | |||||| || | |||||| |||||    
T  29863472 aacatgtgcaatattgcacatgttaaaggaactaaaaatagtaactttacattgaaaaagaataattatttattaaaaagttttatagttaatataaaat 29863373  T
Q  100 attcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaat 151  Q
        ||||||| |  |||  ||||||||||||| ||||||||||||||||||    
T  29863372 gcaaaagttccgacacaattttactattttaaacttcttaacatgtgcaaat 29863321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 143
Target Start/End: Original strand, 30623334 - 30623477
Alignment:
Q  1 aacatgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattg-aaatcaacaattatttaacagaaagttatacatttaatacaaaat 99  Q
    ||||||||||| ||| ||||||||||   |||||| |||||||| ||||| ||| ||| |||||||||||||    |||||| || ||||||||  ||||    
T  30623334 aacatgtgcaacattacacatgttaaaacaactaatagtagtaactttttcttgaaaaacaacaattatttattcaaaagttttatatttaatatcaaat 30623433  T
Q  100 attcaagttccaatgcaaagttactattttaaatttcttaacat 143  Q
     | |||||| |||| |||| || |||||||||| ||||||||||    
T  30623434 gtacaagtttcaatacaaaatttctattttaaacttcttaacat 30623477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 8 - 58
Target Start/End: Complemental strand, 2086998 - 2086948
Alignment:
Q  8 gcaatattgcacatgttaaggtaactaaaagtagtaagtttttattgaaat 58  Q
    |||||||||||||||||||||||| |||||||||||| |||| ||||||||    
T  2086998 gcaatattgcacatgttaaggtaattaaaagtagtaatttttcattgaaat 2086948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 17596321 - 17596370
Alignment:
Q  1 aacatgtgcaatattgcacatgttaaggtaactaaaagtagtaagttttt 50  Q
    |||||||||||||||||||||||||||  ||||||||||||||| |||||    
T  17596321 aacatgtgcaatattgcacatgttaagacaactaaaagtagtaacttttt 17596370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 31791086 - 31791029
Alignment:
Q  1 aacatgtgcaatattgcacatgtt-aaggtaactaaaagtagtaagtttttattgaaa 57  Q
    |||||||||||||||||||||||| |||| ||||||| ||||||| ||||||||||||    
T  31791086 aacatgtgcaatattgcacatgttaaaggaaactaaatgtagtaactttttattgaaa 31791029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 26602600 - 26602552
Alignment:
Q  1 aacatgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttt 49  Q
    ||||||||||||||||||||| |||||| ||||||||||||||| ||||    
T  26602600 aacatgtgcaatattgcacatattaaggaaactaaaagtagtaattttt 26602552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 5 - 151
Target Start/End: Complemental strand, 31169929 - 31169782
Alignment:
Q  5 tgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattgaaatc-aacaattatttaacagaaagttatacatttaatacaaaatattc 103  Q
    |||||||  |||||||||||||||  ||||||| |||||| ||||  |||||| | || ||||| |||  | |||  || | |||||||| |||||   |    
T  31169929 tgtgcaaacttgcacatgttaaggctactaaaaatagtaatttttctttgaaaaccaataattaattattaaaaacctacatatttaatataaaatgcac 31169830  T
Q  104 aagttccaatgcaaagttactattttaaatttcttaacatgtgcaaat 151  Q
    |||||||||  ||||||||||| ||||||||| |||||||||||||||    
T  31169829 aagttccaagtcaaagttactactttaaatttgttaacatgtgcaaat 31169782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 110 - 150
Target Start/End: Complemental strand, 1814572 - 1814532
Alignment:
Q  110 caatgcaaagttactattttaaatttcttaacatgtgcaaa 150  Q
    ||||||||||||||||||||||| || ||||||||||||||    
T  1814572 caatgcaaagttactattttaaagtttttaacatgtgcaaa 1814532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 115 - 151
Target Start/End: Original strand, 3853066 - 3853102
Alignment:
Q  115 caaagttactattttaaatttcttaacatgtgcaaat 151  Q
    ||||||||||| |||||||||||||||||||||||||    
T  3853066 caaagttactactttaaatttcttaacatgtgcaaat 3853102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 63 - 151
Target Start/End: Complemental strand, 23936483 - 23936395
Alignment:
Q  63 aattatttaacagaaagttatacatttaatacaaaatattcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaat 151  Q
    |||||||||  | ||||||||  |||||||| ||||| | ||||||||||   ||||||||||| ||||| || |||||||||||||||    
T  23936483 aattatttattaaaaagttatgtatttaatataaaatgtacaagttccaaaagaaagttactatgttaaacttgttaacatgtgcaaat 23936395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 32615632 - 32615593
Alignment:
Q  1 aacatgtgcaatattgcacatgttaaggtaactaaaagta 40  Q
    |||||||| ||||||||| |||||||||||||||||||||    
T  32615632 aacatgtgtaatattgcatatgttaaggtaactaaaagta 32615593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 10345709 - 10345671
Alignment:
Q  1 aacatgtgcaatattgcacatgttaaggtaactaaaagt 39  Q
    |||||||||||||||||||||||||| | ||||||||||    
T  10345709 aacatgtgcaatattgcacatgttaaagaaactaaaagt 10345671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 74 - 156
Target Start/End: Complemental strand, 10671691 - 10671609
Alignment:
Q  74 agaaagttatacatttaatacaaaatattcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaatgcaaa 156  Q
    ||||||| ||| ||||||| |||||| |  |||||||||  |||| |||||||||| ||  ||||||||||||||| ||||||    
T  10671691 agaaagtcatatatttaatgcaaaatgtataagttccaaaacaaacttactattttgaacatcttaacatgtgcaattgcaaa 10671609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 98 - 151
Target Start/End: Original strand, 3261184 - 3261237
Alignment:
Q  98 atattcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaat 151  Q
    |||| ||||||| ||||||||||| |||||||||| || |||||||||| ||||    
T  3261184 atatacaagttctaatgcaaagtttctattttaaactttttaacatgtgtaaat 3261237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 151
Target Start/End: Original strand, 17154630 - 17154782
Alignment:
Q  1 aacatgtgcaatattgcacatgttaaggtaactaaaagtagtaagttttt-attgaaat-caacaattatttaacagaaagttatacatttaatacaaaa 98  Q
    |||||||| ||||||| ||||||||| | || |||||||| ||| ||||| |||||||  ||| ||| | |||  | ||| |||||||||||||| | ||    
T  17154630 aacatgtgaaatattgtacatgttaaagaaattaaaagtattaatttttttattgaaaaacaataatcaattattaaaaaattatacatttaatatagaa 17154729  T
Q  99 tattcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaat 151  Q
    ||  |||||| |||  ||||  || |||||||||||| |||||||||| ||||    
T  17154730 tacacaagtttcaaaacaaacctattattttaaattttttaacatgtgtaaat 17154782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 34733870 - 34733814
Alignment:
Q  1 aacatgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattgaaa 57  Q
    |||||||||||  |||||||||||||||  |||||||| || || ||||||||||||    
T  34733870 aacatgtgcaaatttgcacatgttaaggatactaaaagaagcaactttttattgaaa 34733814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 127; Significance: 2e-65; HSPs: 59)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 1 - 151
Target Start/End: Complemental strand, 9759311 - 9759161
Alignment:
Q  1 aacatgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattgaaatcaacaattatttaacagaaagttatacatttaatacaaaata 100  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||| ||||||||| ||||||||||||||     
T  9759311 aacatgtgcaatattgcacatgttaaggtaactaaaagtagcaagtttttattgaaaccaacaattatttaacaaaaagttatatatttaatacaaaatg 9759212  T
Q  101 ttcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaat 151  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  9759211 ttcaacttccaatgcaaagttactattttaaatttcttaacatgtgcaaat 9759161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 1 - 151
Target Start/End: Original strand, 50352311 - 50352461
Alignment:
Q  1 aacatgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattgaaatcaacaattatttaacagaaagttatacatttaatacaaaata 100  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||| ||||||||| ||||||||||||||     
T  50352311 aacatgtgcaatattgcacatgttaaggtaactaaaagtagcaagtttttattgaaaccaacaattatttaacaaaaagttatatatttaatacaaaatg 50352410  T
Q  101 ttcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaat 151  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  50352411 ttcaagttccaatgcaaaattactattttaaatttcttaacatgtgcaaat 50352461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 126; E-Value: 6e-65
Query Start/End: Original strand, 6 - 151
Target Start/End: Original strand, 39876844 - 39876989
Alignment:
Q  6 gtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattgaaatcaacaattatttaacagaaagttatacatttaatacaaaatattcaa 105  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||| |||| ||||||||| |||||    
T  39876844 gtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattgaaaccaacaattatttaacaaaaagttatatatttgatacaaaatgttcaa 39876943  T
Q  106 gttccaatgcaaagttactattttaaatttcttaacatgtgcaaat 151  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  39876944 gttccaatgcaaagttactattttaaatttcttaacatgtgcaaat 39876989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 111; E-Value: 6e-56
Query Start/End: Original strand, 1 - 151
Target Start/End: Original strand, 40049567 - 40049717
Alignment:
Q  1 aacatgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattgaaatcaacaattatttaacagaaagttatacatttaatacaaaata 100  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||| |||| |||||||||||||||| ||| ||||| |||||||| |||||     
T  40049567 aacatgtgcaatattgcacatgttaaagtaactaaaagtagtaagtttttatagaaaccaacaattatttaacaaaaaattatatatttaataaaaaatg 40049666  T
Q  101 ttcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaat 151  Q
    || ||||||||||||||| ||||||||||||||||||||||||||||||||    
T  40049667 ttaaagttccaatgcaaaattactattttaaatttcttaacatgtgcaaat 40049717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 4 - 151
Target Start/End: Original strand, 51691353 - 51691500
Alignment:
Q  4 atgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattgaaatc-aacaattatttaacagaaagttatacatttaatacaaaatatt 102  Q
    |||||||| |||||||||||||| | |||||||| |||||||| |||||||||| | || |||||||||  | |||| |||| ||||||| ||||||||     
T  51691353 atgtgcaacattgcacatgttaaagcaactaaaa-tagtaagtctttattgaaaactaataattatttattaaaaagctatatatttaattcaaaatata 51691451  T
Q  103 caagttccaatgcaaagttactattttaaatttcttaacatgtgcaaat 151  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||    
T  51691452 caagttccaatgcaaagttactatttaaaatttcttaacatgtgcaaat 51691500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 1 - 151
Target Start/End: Original strand, 34941286 - 34941437
Alignment:
Q  1 aacatgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattgaaat-caacaattatttaacagaaagttatacatttaatacaaaat 99  Q
    |||||||| |||||||||||| ||||||||||||||||||  || ||||||||||||  |||||| ||||||  | ||||||||| ||| ||||||||||    
T  34941286 aacatgtgtaatattgcacatattaaggtaactaaaagtaacaactttttattgaaaaacaacaactatttattaaaaagttatatattaaatacaaaat 34941385  T
Q  100 attcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaat 151  Q
     | |||||||||||||||| ||||||||||||| |||||| |||||||||||    
T  34941386 gtacaagttccaatgcaaaattactattttaaacttcttatcatgtgcaaat 34941437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 60 - 151
Target Start/End: Complemental strand, 10658527 - 10658436
Alignment:
Q  60 aacaattatttaacagaaagttatacatttaatacaaaatattcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaat 151  Q
    ||||||||||||||| ||||||||| |||||||||||||| |||||||| ||||| |||||||||||||||||||| |||||||||||||||    
T  10658527 aacaattatttaacaaaaagttatatatttaatacaaaatgttcaagtttcaatgtaaagttactattttaaattttttaacatgtgcaaat 10658436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 60 - 151
Target Start/End: Complemental strand, 10872672 - 10872581
Alignment:
Q  60 aacaattatttaacagaaagttatacatttaatacaaaatattcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaat 151  Q
    ||||||||||||||| ||||||||| |||||||||||||| |||||||| ||||| |||||||||||||||||||| |||||||||||||||    
T  10872672 aacaattatttaacaaaaagttatatatttaatacaaaatgttcaagtttcaatgtaaagttactattttaaattttttaacatgtgcaaat 10872581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 10658613 - 10658542
Alignment:
Q  1 aacatgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattgaaatcaacaattatttaa 72  Q
    ||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||    
T  10658613 aacatgtgcaatattacacatgttaaggtaactaaaagtagcaagtttttattgaaaccaacaattatttaa 10658542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 10872758 - 10872687
Alignment:
Q  1 aacatgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattgaaatcaacaattatttaa 72  Q
    ||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||    
T  10872758 aacatgtgcaatattacacatgttaaggtaactaaaagtagcaagtttttattgaaaccaacaattatttaa 10872687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 1 - 151
Target Start/End: Original strand, 2096879 - 2097030
Alignment:
Q  1 aacatgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattgaaat-caacaattatttaacagaaagttatacatttaatacaaaat 99  Q
    |||||||||||||||||||| |||||   ||||||||||   || ||||||||||||  |||||||||||||  | ||||||||| |||||||| |||||    
T  2096879 aacatgtgcaatattgcacaagttaaatcaactaaaagtgacaactttttattgaaaaacaacaattatttattaaaaagttatatatttaatataaaat 2096978  T
Q  100 attcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaat 151  Q
       ||||||||||| |||| |||| ||||| || ||||||||||||||||||    
T  2096979 gcacaagttccaatacaaacttaccattttgaacttcttaacatgtgcaaat 2097030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 1 - 151
Target Start/End: Complemental strand, 19451070 - 19450919
Alignment:
Q  1 aacatgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattg-aaatcaacaattatttaacagaaagttatacatttaatacaaaat 99  Q
    ||||||||||| ||||||||||||||   |||||| |||||||| ||||| ||| ||| |||||||||||||    |||||| || ||||||||  ||||    
T  19451070 aacatgtgcaacattgcacatgttaaaacaactaatagtagtaactttttcttggaaaacaacaattatttattcaaaagttttatatttaatattaaat 19450971  T
Q  100 attcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaat 151  Q
     | ||||||||||| |||| || |||||||||| ||||||||||||||||||    
T  19450970 gtacaagttccaatacaaaatttctattttaaacttcttaacatgtgcaaat 19450919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 4 - 151
Target Start/End: Complemental strand, 29190982 - 29190835
Alignment:
Q  4 atgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattg-aaatcaacaattatttaacagaaagttatacatttaatacaaaatatt 102  Q
    ||||||||||||||| ||||||||||||||||||||||||| |||| |||| ||| ||||||||||| |  | || |||  | ||||||||  ||| |      
T  29190982 atgtgcaatattgcatatgttaaggtaactaaaagtagtaatttttcattgaaaaccaacaattattgatta-aatgttgcatatttaatattaaaaaca 29190884  T
Q  103 caagttccaatgcaaagttactattttaaatttcttaacatgtgcaaat 151  Q
    ||||||||||  ||||||||||| |||||| ||||||||||||||||||    
T  29190883 caagttccaagtcaaagttactaatttaaacttcttaacatgtgcaaat 29190835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 4 - 151
Target Start/End: Original strand, 52391309 - 52391457
Alignment:
Q  4 atgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattgaaat-caacaattatttaacagaaagttatacatttaatacaaaatatt 102  Q
    ||||| ||| |||||||||||||  ||||||| |||||||| ||||| ||||||  |||||||||||||    |||||| || ||||||||  |||| |     
T  52391309 atgtgtaatgttgcacatgttaaaataactaatagtagtaacttttttttgaaaaacaacaattatttattcaaaagttttatatttaatattaaatgta 52391408  T
Q  103 caagttccaatgcaaagttactattttaaatttcttaacatgtgcaaat 151  Q
    ||||||||||| |||| || |||||||||| ||||||||||||||||||    
T  52391409 caagttccaatacaaaatttctattttaaacttcttaacatgtgcaaat 52391457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 1 - 151
Target Start/End: Original strand, 19468202 - 19468353
Alignment:
Q  1 aacatgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattg-aaatcaacaattatttaacagaaagttatacatttaatacaaaat 99  Q
    ||||||||||| ||||||||||||||   |||||| |||||||| ||||| ||| ||| |||||||||||||    |||||| || ||||||||  ||||    
T  19468202 aacatgtgcaacattgcacatgttaaaacaactaatagtagtaactttttcttggaaaacaacaattatttattcaaaagttttatatttaatattaaat 19468301  T
Q  100 attcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaat 151  Q
     | |||||| |||| |||| || |||||||||| ||||||||||||||||||    
T  19468302 gtacaagtttcaatacaaaatttctattttaaacttcttaacatgtgcaaat 19468353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 13 - 142
Target Start/End: Complemental strand, 13009913 - 13009783
Alignment:
Q  13 attgcacatgttaaggtaactaaaagtagtaagtttttattgaaatc-aacaattatttaacagaaagttatacatttaatacaaaatattcaagttcca 111  Q
    |||||| |||||||   ||||||||||| |||||||||||||||| | || |||||||||  | |||| |||| |||||||||||||||| |||||||||    
T  13009913 attgcatatgttaaaacaactaaaagtattaagtttttattgaaaactaataattatttactaaaaagctatatatttaatacaaaatatacaagttcca 13009814  T
Q  112 atgcaaagttactattttaaatttcttaaca 142  Q
    |||  ||||| |||||| ||| |||||||||    
T  13009813 atgtgaagttgctatttaaaacttcttaaca 13009783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 151
Target Start/End: Original strand, 24684844 - 24684996
Alignment:
Q  1 aacatgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttatt--gaaatcaacaattatttaacagaaagttatacatttaatacaaaa 98  Q
    ||||| ||||| ||| ||||||||||   |||||| |||||||| ||||| ||  |||| |||||||||||||    |||||| || ||||||||  |||    
T  24684844 aacatttgcaacattacacatgttaaaacaactaatagtagtaactttttttttggaaaacaacaattatttattcaaaagttttatatttaatattaaa 24684943  T
Q  99 tattcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaat 151  Q
    | | |||||||||||||||| || |||||||||| ||||||||||||||||||    
T  24684944 tgtacaagttccaatgcaaaatttctattttaaacttcttaacatgtgcaaat 24684996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 1 - 151
Target Start/End: Original strand, 17409832 - 17409983
Alignment:
Q  1 aacatgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattgaaat-caacaattatttaa-cagaaagttatacatttaatacaaaa 98  Q
    ||||||||||| ||||||||||||||   |||||| |||||||| ||||| ||||||  |||||||||||||  || ||| || || ||||||||  |||    
T  17409832 aacatgtgcaacattgcacatgttaaaacaactaatagtagtaactttttcttgaaaaacaacaattatttattcaaaaaatt-tatatttaatattaaa 17409930  T
Q  99 tattcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaat 151  Q
    | | ||||||||||| ||||||| |||||||||| |||||| |||||||||||    
T  17409931 tgtacaagttccaatacaaagtttctattttaaacttcttatcatgtgcaaat 17409983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 4 - 151
Target Start/End: Original strand, 49181083 - 49181231
Alignment:
Q  4 atgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattg-aaatcaacaattatttaacagaaagttatacatttaatacaaaatatt 102  Q
    ||||||||||||||||||||||||| |||||||||||| ||  ||| |||| ||| ||||||| |||||    ||||||| | |||||||| |||||       
T  49181083 atgtgcaatattgcacatgttaaggaaactaaaagtagcaacctttaattgaaaaacaacaatcatttattgaaaagttacatatttaatataaaatgca 49181182  T
Q  103 caagttccaatgcaaagttactattttaaatttcttaacatgtgcaaat 151  Q
    |||||| |||| |||| |||||||||| || ||||||||| ||||||||    
T  49181183 caagttacaatacaaatttactattttgaacttcttaacaggtgcaaat 49181231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 151
Target Start/End: Complemental strand, 8736980 - 8736830
Alignment:
Q  1 aacatgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattg-aaatcaacaattatttaacagaaagttatacatttaatacaaaat 99  Q
    ||||||||||| |||||||||||||||  | ||||||||||||| ||||||||| ||| ||| | |||||||  | ||||||| | ||||||||  ||||    
T  8736980 aacatgtgcaacattgcacatgttaagacatctaaaagtagtaattttttattgaaaaacaaaacttatttattaaaaagttacatatttaatatgaaat 8736881  T
Q  100 attcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaat 151  Q
       | ||||||||  ||||||||| | |||||||||||||||||||||||||    
T  8736880 gcac-agttccaagtcaaagttaccactttaaatttcttaacatgtgcaaat 8736830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 36000109 - 36000040
Alignment:
Q  1 aacatgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattg-aaatcaacaattatt 69  Q
    ||||| |||||||||| ||||||||||||||||||||||||||| ||||||||| ||| |||||||||||    
T  36000109 aacatatgcaatattgtacatgttaaggtaactaaaagtagtaactttttattgaaaaccaacaattatt 36000040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 49228365 - 49228421
Alignment:
Q  1 aacatgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattgaaa 57  Q
    |||||||||||||||||| ||||||||||||||||||||||||| |||| |||||||    
T  49228365 aacatgtgcaatattgcatatgttaaggtaactaaaagtagtaacttttcattgaaa 49228421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 151
Target Start/End: Original strand, 7349697 - 7349847
Alignment:
Q  1 aacatgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattg-aaatcaacaattatttaacagaaagttatacatttaatacaaaat 99  Q
    |||| ||||||||||||||||||||||| ||||||||||| ||| |||| |||| ||| ||||||||||||   | ||||||| | |||||||| ||||     
T  7349697 aacacgtgcaatattgcacatgttaaggcaactaaaagtaataacttttcattgaaaaccaacaattatttgtta-aaagttacatatttaatataaaaa 7349795  T
Q  100 attcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaat 151  Q
    |  ||||||  ||  ||||||||||| |||||| |||||| ||||| |||||    
T  7349796 acacaagttttaagtcaaagttactactttaaacttcttatcatgtacaaat 7349847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 151
Target Start/End: Complemental strand, 16667554 - 16667403
Alignment:
Q  1 aacatgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattg-aaatcaacaattatttaacagaaagttatacatttaatacaaaat 99  Q
    ||||||||||| |||||||||||||||  | ||||||||||||| |||| |||| ||| ||||| |||||||  | |||| || | |||||||| |||||    
T  16667554 aacatgtgcaacattgcacatgttaagacatctaaaagtagtaatttttcattgaaaaacaacacttatttattaaaaagctacatatttaatataaaat 16667455  T
Q  100 attcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaat 151  Q
    |  |||||| |||   ||| |||  |||||||| ||||||||||||||||||    
T  16667454 acacaagtttcaagttaaaattatcattttaaacttcttaacatgtgcaaat 16667403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 151
Target Start/End: Original strand, 23545484 - 23545635
Alignment:
Q  1 aacatgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattg-aaatcaacaattatttaacagaaagttatacatttaatacaaaat 99  Q
    ||||||||||| ||||||||||||||   |||||| |||||||| ||||| ||| ||| |||||||||||||    |||||| || ||||||||  ||||    
T  23545484 aacatgtgcaacattgcacatgttaaaacaactaatagtagtaattttttcttgaaaaacaacaattatttattcaaaagttttatatttaatattaaat 23545583  T
Q  100 attcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaat 151  Q
     | ||| ||||||| |||| ||  ||||||||| || |||||||||||||||    
T  23545584 gtacaatttccaatacaaaatttatattttaaacttattaacatgtgcaaat 23545635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 151
Target Start/End: Complemental strand, 54495807 - 54495656
Alignment:
Q  1 aacatgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattgaaat-caacaattatttaacagaaagttatacatttaatacaaaat 99  Q
    ||||||||||| ||||||||||||||| || ||||||||||||| ||||| ||||||  ||| | |||||||  | |||| || | ||||||||  ||||    
T  54495807 aacatgtgcaacattgcacatgttaagatatctaaaagtagtaatttttttttgaaaaacaaaacttatttattaaaaagctacatatttaatatgaaat 54495708  T
Q  100 attcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaat 151  Q
       ||||||||||   |||||||| | |||||| ||||||||||||||||||    
T  54495707 gcacaagttccaagttaaagttaccactttaaacttcttaacatgtgcaaat 54495656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 23553578 - 23553648
Alignment:
Q  1 aacatgtgcaatattgcacatgttaaggtaactaaaagtagtaa-gtttttattg-aaatcaacaattatt 69  Q
    ||||||||||||||||||||||||||||||||||||| ||||||  ||||||||| ||| |||||||||||    
T  23553578 aacatgtgcaatattgcacatgttaaggtaactaaaaatagtaatttttttattgaaaaccaacaattatt 23553648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 55 - 151
Target Start/End: Original strand, 55813927 - 55814023
Alignment:
Q  55 aaatcaacaattatttaacagaaagttatacatttaatacaaaatattcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaat 151  Q
    |||||||||||||||||  | ||||||||| |||||||||| ||| | ||| || |||| |||| ||| ||||||||| || |||||||||||||||    
T  55813927 aaatcaacaattatttattaaaaagttatatatttaatacagaatgtacaaatttcaatacaaaattattattttaaactttttaacatgtgcaaat 55814023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 151
Target Start/End: Complemental strand, 10389437 - 10389287
Alignment:
Q  1 aacatgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattg-aaatcaacaattatttaacagaaagttatacatttaatacaaaat 99  Q
    ||||||||||||||| |||||||||  ||||||||||||| ||| |||| |||| ||| ||||||||||| |  | ||||||| | |||| ||| ||||     
T  10389437 aacatgtgcaatattacacatgttatagtaactaaaagtattaacttttaattgaaaaccaacaattattgatta-aaagttacatatttcatataaaaa 10389339  T
Q  100 attcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaat 151  Q
    |  ||||||| ||  |||| |||||| || |||||| |||||||||||||||    
T  10389338 acacaagttctaagtcaaaattactacttgaaattttttaacatgtgcaaat 10389287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 5 - 151
Target Start/End: Original strand, 27019272 - 27019419
Alignment:
Q  5 tgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttatt-gaaatcaacaattatttaacagaaagttatacatttaatacaaaatattc 103  Q
    ||||||| ||||||||||||||   |||||| |||||||| ||||| || |||| |||||||||||||    |||||| || ||||||||  |||| | |    
T  27019272 tgtgcaacattgcacatgttaaaacaactaatagtagtaactttttcttggaaaacaacaattatttattcaaaagttttatatttaatattaaatgtac 27019371  T
Q  104 aagttccaatgcaaagttactattttaaatttcttaacatgtgcaaat 151  Q
    ||||| |||| |||| || |||||||||| || ||||||| |||||||    
T  27019372 aagtttcaatacaaaatttctattttaaactttttaacatatgcaaat 27019419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 7 - 70
Target Start/End: Complemental strand, 10813658 - 10813594
Alignment:
Q  7 tgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattg-aaatcaacaattattt 70  Q
    |||||||||||| ||||||||| ||||||||||| ||| ||||||||| ||| ||||||||||||    
T  10813658 tgcaatattgcatatgttaaggcaactaaaagtaataactttttattgaaaaccaacaattattt 10813594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 8 - 151
Target Start/End: Original strand, 27362406 - 27362550
Alignment:
Q  8 gcaatattgcacatgttaaggtaactaaaagtagtaagtttttattg-aaatcaacaattatttaacagaaagttatacatttaatacaaaatattcaag 106  Q
    |||| |||||| |||||||| || ||||||||||||| ||||||||| ||| ||| | ||||||| || |||| || | ||||||||  ||||   |||     
T  27362406 gcaacattgcatatgttaagatatctaaaagtagtaattttttattgaaaaacaaaacttatttatcaaaaagctacatatttaatatgaaatgcacaaa 27362505  T
Q  107 ttccaatgcaaagttactattttaaatttcttaacatgtgcaaat 151  Q
    ||||||  |||| |||| | |||||| ||||||||||||||||||    
T  27362506 ttccaagtcaaaattaccactttaaacttcttaacatgtgcaaat 27362550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 115 - 151
Target Start/End: Original strand, 40682555 - 40682591
Alignment:
Q  115 caaagttactattttaaatttcttaacatgtgcaaat 151  Q
    |||||||||||||||||||||||||||||||||||||    
T  40682555 caaagttactattttaaatttcttaacatgtgcaaat 40682591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 49332341 - 49332397
Alignment:
Q  1 aacatgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattgaaa 57  Q
    ||||||||||||||| ||||||||||||||| |||||||| ||| |||| |||||||    
T  49332341 aacatgtgcaatatttcacatgttaaggtaattaaaagtaataacttttcattgaaa 49332397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 40 - 151
Target Start/End: Original strand, 1378066 - 1378177
Alignment:
Q  40 agtaagtttttattgaaatcaacaattatttaacagaaagttatacatttaatacaaaatattcaagttccaatgcaaagttactattttaaatttctta 139  Q
    ||||| || ||||||||| || ||||||||||  | || |||||| ||||||||  |||| | |||||| |||   ||| |||| |||||||||||||||    
T  1378066 agtaatttgttattgaaaacatcaattatttattaaaatgttatatatttaatattaaatgtacaagtttcaagataaatttaccattttaaatttctta 1378165  T
Q  140 acatgtgcaaat 151  Q
    ||||||||||||    
T  1378166 acatgtgcaaat 1378177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 5 - 143
Target Start/End: Original strand, 27756574 - 27756712
Alignment:
Q  5 tgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttatt-gaaatcaacaattatttaacagaaagttatacatttaatacaaaatattc 103  Q
    |||||||||||||||||||||||| ||||||| |||| || |||  ||| |||| || |||||| |||  | ||||||||  |||||||| | ||||| |    
T  27756574 tgtgcaatattgcacatgttaaggaaactaaatgtagcaactttgcattggaaaacaccaatta-ttattaaaaagttatctatttaatatagaatatac 27756672  T
Q  104 aagttccaatgcaaagttactattttaaatttcttaacat 143  Q
    ||||| |||  |||| || ||| |||||||||||||||||    
T  27756673 aagtttcaagacaaacttgctactttaaatttcttaacat 27756712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 48911004 - 48910965
Alignment:
Q  1 aacatgtgcaatattgcacatgttaaggtaactaaaagta 40  Q
    ||||||||||||||||||||||||||| ||||||||||||    
T  48911004 aacatgtgcaatattgcacatgttaagataactaaaagta 48910965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 151
Target Start/End: Complemental strand, 19838859 - 19838710
Alignment:
Q  1 aacatgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattgaaatcaacaattatttaacagaaagttatacatttaatacaaaata 100  Q
    |||||||| || ||||||||||||||   |||||| |||| ||| ||||| || ||| |||||||||||||    |||||| || ||||||||  ||||     
T  19838859 aacatgtggaacattgcacatgttaaaacaactaatagtaataactttttttttaaa-caacaattatttattcaaaagttttatatttaatattaaatg 19838761  T
Q  101 ttcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaat 151  Q
    | ||||||||||| |||| || ||||||||||    |||||||||||||||    
T  19838760 tacaagttccaatacaaaatttctattttaaacgggttaacatgtgcaaat 19838710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 36968296 - 36968338
Alignment:
Q  1 aacatgtgcaatattgcacatgttaaggtaactaaaagtagta 43  Q
    ||||||||||||||| |||||||||| ||||||||||||||||    
T  36968296 aacatgtgcaatattacacatgttaaagtaactaaaagtagta 36968338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 86 - 151
Target Start/End: Complemental strand, 18882351 - 18882286
Alignment:
Q  86 atttaatacaaaatattcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaat 151  Q
    ||||||||  |||| | ||||||||||| |||| || |||||||||| ||||||||||||||||||    
T  18882351 atttaatattaaatgtacaagttccaatacaaaatttctattttaaacttcttaacatgtgcaaat 18882286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 4 - 57
Target Start/End: Original strand, 40681960 - 40682013
Alignment:
Q  4 atgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattgaaa 57  Q
    ||||||||||||||| ||||||||  |||||||| |||||| ||||||||||||    
T  40681960 atgtgcaatattgcatatgttaagtcaactaaaaatagtaattttttattgaaa 40682013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 5 - 69
Target Start/End: Original strand, 49650223 - 49650288
Alignment:
Q  5 tgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattgaaatc-aacaattatt 69  Q
    ||||||||||||||||| |||||||||||||||| ||||| |||| ||| ||| | ||||||||||    
T  49650223 tgtgcaatattgcacatattaaggtaactaaaagaagtaacttttcattaaaaacaaacaattatt 49650288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 24 - 151
Target Start/End: Complemental strand, 41415703 - 41415576
Alignment:
Q  24 taaggtaactaaaagtagtaagtttttattg-aaatcaacaattatttaacagaaagttatacatttaatacaaaatattcaagttccaatgcaaagtta 122  Q
    ||||| ||||||||||||||| |||| |||| |||||||||||||||||  | |||| || | |||||||| |||| |  ||| || |||  ||||||||    
T  41415703 taaggcaactaaaagtagtaacttttaattgaaaatcaacaattatttatta-aaagctacatatttaatataaaaaacacaaatttcaagtcaaagtta 41415605  T
Q  123 ctattttaaatttcttaacatgtgcaaat 151  Q
    ||| |||||| || ||| |||||||||||    
T  41415604 ctactttaaacttattatcatgtgcaaat 41415576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 20 - 151
Target Start/End: Original strand, 53961350 - 53961481
Alignment:
Q  20 atgttaaggtaactaaaagtagtaagtttttattg-aaatcaacaattatttaacagaaagttatacatttaatacaaaatattcaagttccaatgcaaa 118  Q
    ||||||| ||||||||||||||||| |||| |||| |||||||||||||||    | || |||| | |||||||| |||| |  ||| || |||  ||||    
T  53961350 atgttaaagtaactaaaagtagtaatttttcattgaaaatcaacaattattgttta-aatgttacatatttaatataaaaaacacaaatttcaagtcaaa 53961448  T
Q  119 gttactattttaaatttcttaacatgtgcaaat 151  Q
     |||||| |||||| ||||||||||||||||||    
T  53961449 attactaatttaaacttcttaacatgtgcaaat 53961481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 5 - 151
Target Start/End: Complemental strand, 47327058 - 47326911
Alignment:
Q  5 tgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattg-aaatcaacaattatttaacagaaagttatacatttaatacaaaatattc 103  Q
    ||||||| |||||||||||||||  | ||||||||||||| |||| |||| ||| ||| | |||||||  | |||  || | ||||||||  ||||        
T  47327058 tgtgcaacattgcacatgttaagacatctaaaagtagtaatttttcattgaaaaacaaaacttatttattaaaaaactacatatttaatatgaaatgcaa 47326959  T
Q  104 aagttccaatgcaaagttactattttaaatttcttaacatgtgcaaat 151  Q
    |||||||||  ||||||||| | |||||| ||||||||||||||||||    
T  47326958 aagttccaagtcaaagttaccactttaaacttcttaacatgtgcaaat 47326911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 5 - 151
Target Start/End: Complemental strand, 47341854 - 47341707
Alignment:
Q  5 tgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattg-aaatcaacaattatttaacagaaagttatacatttaatacaaaatattc 103  Q
    ||||||| |||||||||||||||  | ||||||||||||| |||| |||| ||| ||| | |||||||  | |||  || | ||||||||  ||||        
T  47341854 tgtgcaacattgcacatgttaagacatctaaaagtagtaatttttcattgaaaaacaaaacttatttattaaaaaactacatatttaatatgaaatgcaa 47341755  T
Q  104 aagttccaatgcaaagttactattttaaatttcttaacatgtgcaaat 151  Q
    |||||||||  ||||||||| | |||||| ||||||||||||||||||    
T  47341754 aagttccaagtcaaagttaccactttaaacttcttaacatgtgcaaat 47341707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 25 - 69
Target Start/End: Complemental strand, 48910947 - 48910902
Alignment:
Q  25 aaggtaactaaaagtagtaagtttttattg-aaatcaacaattatt 69  Q
    |||||||||||||||||||| ||||||||| |||| ||||||||||    
T  48910947 aaggtaactaaaagtagtaattttttattgaaaattaacaattatt 48910902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 76 - 141
Target Start/End: Complemental strand, 51070490 - 51070425
Alignment:
Q  76 aaagttatacatttaatacaaaatattcaagttccaatgcaaagttactattttaaatttcttaac 141  Q
    ||||||||| |||||||| ||||||  |||||| |||  |||| |||| |||||||||||||||||    
T  51070490 aaagttatatatttaatataaaatacacaagttacaaaacaaacttaccattttaaatttcttaac 51070425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 6875509 - 6875609
Alignment:
Q  1 aacatgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttatt-gaaatcaacaattatttaacagaaagttatacatttaatacaaaat 99  Q
    ||||| ||||||||||||||||||||   |||||||| ||||||  ||||||| ||||  | ||||||||||    ||||||||| |||||||| |||||    
T  6875509 aacatttgcaatattgcacatgttaaaacaactaaaaatagtaatattttattggaaaatatcaattatttattgaaaagttataaatttaatataaaat 6875608  T
Q  100 a 100  Q
    |    
T  6875609 a 6875609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 115 - 151
Target Start/End: Complemental strand, 23051437 - 23051401
Alignment:
Q  115 caaagttactattttaaatttcttaacatgtgcaaat 151  Q
    ||||||||||| ||||||||||||| |||||||||||    
T  23051437 caaagttactactttaaatttcttatcatgtgcaaat 23051401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 115 - 151
Target Start/End: Original strand, 23438278 - 23438314
Alignment:
Q  115 caaagttactattttaaatttcttaacatgtgcaaat 151  Q
    |||||||||||||||||| |||| |||||||||||||    
T  23438278 caaagttactattttaaaattctcaacatgtgcaaat 23438314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 25843299 - 25843355
Alignment:
Q  1 aacatgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattgaaa 57  Q
    ||||||| ||||||   ||||||||| | ||||||||||||||| ||||||||||||    
T  25843299 aacatgtacaatataatacatgttaaagcaactaaaagtagtaactttttattgaaa 25843355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 111 - 151
Target Start/End: Original strand, 32279190 - 32279230
Alignment:
Q  111 aatgcaaagttactattttaaatttcttaacatgtgcaaat 151  Q
    |||||||| ||||||||||||| || |||||||||||||||    
T  32279190 aatgcaaatttactattttaaactttttaacatgtgcaaat 32279230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 32459340 - 32459396
Alignment:
Q  1 aacatgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattgaaa 57  Q
    |||||||||||  |||||||||||||||  |||||||| || || ||||||||||||    
T  32459340 aacatgtgcaaatttgcacatgttaaggatactaaaagaagcaactttttattgaaa 32459396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 116 - 144
Target Start/End: Original strand, 36971398 - 36971426
Alignment:
Q  116 aaagttactattttaaatttcttaacatg 144  Q
    |||||||||||||||||||||||||||||    
T  36971398 aaagttactattttaaatttcttaacatg 36971426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 115 - 151
Target Start/End: Complemental strand, 41488773 - 41488737
Alignment:
Q  115 caaagttactattttaaatttcttaacatgtgcaaat 151  Q
    |||| |||| |||||||||||||||||||||||||||    
T  41488773 caaatttacaattttaaatttcttaacatgtgcaaat 41488737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 41887577 - 41887632
Alignment:
Q  1 aacatgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattgaaa 57  Q
    |||||||||||  |||||||||||||||  ||| |||||||||||||| ||||||||    
T  41887577 aacatgtgcaaatttgcacatgttaaggatact-aaagtagtaagtttatattgaaa 41887632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 41887738 - 41887682
Alignment:
Q  1 aacatgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattgaaa 57  Q
    |||||||||||  |||||||||||||||  |||||||| || || ||||||||||||    
T  41887738 aacatgtgcaaatttgcacatgttaaggatactaaaagaagcaactttttattgaaa 41887682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 103 - 151
Target Start/End: Original strand, 49228765 - 49228813
Alignment:
Q  103 caagttccaatgcaaagttactattttaaatttcttaacatgtgcaaat 151  Q
    ||||||||||  ||||||||||| |||||| ||||||||| ||||||||    
T  49228765 caagttccaagtcaaagttactaatttaaacttcttaacacgtgcaaat 49228813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 123; Significance: 4e-63; HSPs: 50)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 1 - 151
Target Start/End: Complemental strand, 1502889 - 1502739
Alignment:
Q  1 aacatgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattgaaatcaacaattatttaacagaaagttatacatttaatacaaaata 100  Q
    ||||||||||||||||||||||||||||||||||||||||| || |||||||||||| |||||||||||||||| ||||||||| ||||||||||||||     
T  1502889 aacatgtgcaatattgcacatgttaaggtaactaaaagtagcaaatttttattgaaaacaacaattatttaacaaaaagttatatatttaatacaaaatg 1502790  T
Q  101 ttcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaat 151  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  1502789 ttcaaattccaatgcaaagttactattttaaatttcttaacatgtgcaaat 1502739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 1 - 151
Target Start/End: Complemental strand, 23576583 - 23576433
Alignment:
Q  1 aacatgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattgaaatcaacaattatttaacagaaagttatacatttaatacaaaata 100  Q
    ||||| ||||||||||||||||||||||||||||||||||  ||||||||||||||| |||||||||||||||| ||||||||| ||||||||||||||     
T  23576583 aacatctgcaatattgcacatgttaaggtaactaaaagtaacaagtttttattgaaaccaacaattatttaacaaaaagttatatatttaatacaaaatg 23576484  T
Q  101 ttcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaat 151  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  23576483 ttcaagtttcaatgcaaagttactattttaaatttcttaacatgtgcaaat 23576433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 4 - 140
Target Start/End: Original strand, 3121130 - 3121266
Alignment:
Q  4 atgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattgaaatcaacaattatttaacagaaagttatacatttaatacaaaatattc 103  Q
    |||||||||||| || |||||||||||| ||||||||| ||||||||||||||| |||||||||||||||| ||||||||| |||||||||||||| ||     
T  3121130 atgtgcaatattacatatgttaaggtaattaaaagtagcaagtttttattgaaaccaacaattatttaacaaaaagttatatatttaatacaaaatgttt 3121229  T
Q  104 aagttccaatgcaaagttactattttaaatttcttaa 140  Q
    |||||| |||| |||||||||||||||||||||||||    
T  3121230 aagttctaatgtaaagttactattttaaatttcttaa 3121266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 1 - 151
Target Start/End: Original strand, 23591706 - 23591857
Alignment:
Q  1 aacatgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattgaaa-tcaacaattatttaacagaaagttatacatttaatacaaaat 99  Q
    ||||||||||| |||||||||||||| | |||||||| ||||||||||||||||||| |||| |||||||||  | ||||||||| ||||||||||||||    
T  23591706 aacatgtgcaacattgcacatgttaaagcaactaaaattagtaagtttttattgaaaatcaataattatttattaaaaagttatatatttaatacaaaat 23591805  T
Q  100 attcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaat 151  Q
     | |||||||||||||||||||  ||||| ||||||||||||||||||||||    
T  23591806 gtacaagttccaatgcaaagttgttatttaaaatttcttaacatgtgcaaat 23591857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 9 - 151
Target Start/End: Original strand, 36490795 - 36490938
Alignment:
Q  9 caatattgcacatgttaaggtaactaaaagtagtaagtttttattgaaat-caacaattatttaacagaaagttatacatttaatacaaaatattcaagt 107  Q
    |||||||||||||||||| | || |||||||||||||||||||||||||  |||||||||||||  | ||||||||| ||| |||||||||| | |||||    
T  36490795 caatattgcacatgttaaagcaattaaaagtagtaagtttttattgaaaaacaacaattatttattaaaaagttatatattaaatacaaaatgtacaagt 36490894  T
Q  108 tccaatgcaaagttactattttaaatttcttaacatgtgcaaat 151  Q
    ||||||||||||||||||||||||| ||||||||||||||||||    
T  36490895 tccaatgcaaagttactattttaaacttcttaacatgtgcaaat 36490938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 1 - 151
Target Start/End: Original strand, 44918033 - 44918183
Alignment:
Q  1 aacatgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattg-aaatcaacaattatttaacagaaagttatacatttaatacaaaat 99  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||| |  | |||| || | |||||||| ||||     
T  44918033 aacatgtgcaatattgcacatgttaaggtaactaaaagtagtaaatttttattgaaaatcaacaattattgatta-aaagctacatatttaatataaaaa 44918131  T
Q  100 attcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaat 151  Q
    |   |||||||||   |||||||||| |||||||||||||||||||| ||||    
T  44918132 acataagttccaaattaaagttactactttaaatttcttaacatgtgtaaat 44918183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 1 - 151
Target Start/End: Original strand, 313758 - 313908
Alignment:
Q  1 aacatgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattg-aaatcaacaattatttaacagaaagttatacatttaatacaaaat 99  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||| |||| ||| ||||||||||| |  | |||| || | |||||||| ||||     
T  313758 aacatgtgcaatattgcacatgttaaggtaactaaaagtagtaatttttgattgaaaaccaacaattattgatta-aaagctacatatttaatataaaaa 313856  T
Q  100 attcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaat 151  Q
    |  ||||||||||   |||||||||| |||||| ||||||||||||||||||    
T  313857 acacaagttccaagttaaagttactactttaaacttcttaacatgtgcaaat 313908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 1 - 151
Target Start/End: Complemental strand, 39150496 - 39150346
Alignment:
Q  1 aacatgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattg-aaatcaacaattatttaacagaaagttatacatttaatacaaaat 99  Q
    |||||||||||||||||||||||||||| ||||||||||||||| |||| |||| ||| |||||||||||||  | ||||||| | |||||||| ||||     
T  39150496 aacatgtgcaatattgcacatgttaaggcaactaaaagtagtaacttttcattgaaaaccaacaattatttatta-aaagttacatatttaatataaaaa 39150398  T
Q  100 attcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaat 151  Q
    |  ||| ||||||  ||||||||||| |||||| |||||| |||||||||||    
T  39150397 acacaaattccaagtcaaagttactactttaaacttcttatcatgtgcaaat 39150346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 4 - 151
Target Start/End: Complemental strand, 47355544 - 47355397
Alignment:
Q  4 atgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattgaaatcaacaattatttaacagaaagttatacatttaatacaaaatattc 103  Q
    ||||||||||||||||||||||| | |||||||||||  || |||||||||||| ||||||||| ||| || |||| ||||   |||||| |||||   |    
T  47355544 atgtgcaatattgcacatgttaaagcaactaaaagtataaactttttattgaaaacaacaattacttatcaaaaaggtatatcattaatataaaatgaac 47355445  T
Q  104 aagttccaatgcaaagttactattttaaatttcttaacatgtgcaaat 151  Q
    |||||||||| |||| ||| ||||||||||||||||||||||| ||||    
T  47355444 aagttccaatacaaatttattattttaaatttcttaacatgtgtaaat 47355397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 151
Target Start/End: Original strand, 6754480 - 6754630
Alignment:
Q  1 aacatgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattgaaatcaacaattatttaacagaaagttatacatttaatacaaaata 100  Q
    |||||||||||||||||||||||||||| |||||||| |||||| |||||||||||| ||||||||| |||  | |||  || | | |||||| |||||     
T  6754480 aacatgtgcaatattgcacatgttaaggcaactaaaaatagtaactttttattgaaaccaacaattaattattaaaaatctacataattaatataaaatg 6754579  T
Q  101 ttcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaat 151  Q
      ||||||||||  ||||||||||| |||||| |||||| |||||||||||    
T  6754580 cacaagttccaagtcaaagttactactttaaacttcttatcatgtgcaaat 6754630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 1 - 151
Target Start/End: Original strand, 17919462 - 17919612
Alignment:
Q  1 aacatgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattg-aaatcaacaattatttaacagaaagttatacatttaatacaaaat 99  Q
    |||||||||||||||| ||||||||||| ||||||||||||||| |||| |||| ||| |||||||||||||  | ||||||| | |||||||| ||||     
T  17919462 aacatgtgcaatattgtacatgttaaggcaactaaaagtagtaacttttcattgaaaaccaacaattatttatta-aaagttacatatttaatataaaaa 17919560  T
Q  100 attcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaat 151  Q
    |  ||| ||||||  ||||||||||| |||||| ||||||  ||||||||||    
T  17919561 acacaaattccaagtcaaagttactactttaaacttcttattatgtgcaaat 17919612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 151
Target Start/End: Original strand, 41624838 - 41624988
Alignment:
Q  1 aacatgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattgaaatcaacaattatttaacagaaagttatacatttaatacaaaata 100  Q
    |||||||||||||||||||||||||| | |||||||| |||||| |||||||||||| ||||||||| |||  | |||  || | | |||||| |||||     
T  41624838 aacatgtgcaatattgcacatgttaaagcaactaaaaatagtaactttttattgaaaccaacaattaattattaaaaatctacataattaatataaaatg 41624937  T
Q  101 ttcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaat 151  Q
      ||||||||||  ||||||||||| |||||| |||||| ||| |||||||    
T  41624938 cacaagttccaagtcaaagttactactttaaacttcttatcatatgcaaat 41624988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 4 - 151
Target Start/End: Complemental strand, 7520164 - 7520016
Alignment:
Q  4 atgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttatt-gaaatcaacaattatttaacagaaagttatacatttaatacaaaatatt 102  Q
    ||||||||||||||||||||||| | ||||||||||||||| ||||||||  |||  || | |||||||  | || |||||| ||| |||||||||| |     
T  7520164 atgtgcaatattgcacatgttaaagcaactaaaagtagtaaatttttattaaaaaataatacttatttattaaaatgttatatattaaatacaaaatgta 7520065  T
Q  103 caagttccaatgcaaagttactattttaaatttcttaacatgtgcaaat 151  Q
    ||| || ||||||||||||  ||||||||| ||||||||||||| ||||    
T  7520064 caaatttcaatgcaaagttgttattttaaacttcttaacatgtgaaaat 7520016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 4 - 151
Target Start/End: Original strand, 25465170 - 25465317
Alignment:
Q  4 atgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattga-aatcaacaattatttaacagaaagttatacatttaatacaaaatatt 102  Q
    ||||||||||||||||||||||| || ||||||||||| || |||| ||||| || ||||||||||||| || ||||||| | ||||   |  ||||       
T  25465170 atgtgcaatattgcacatgttaaagtcactaaaagtagcaactttt-attgagaaacaacaattatttatcaaaaagttaaatattttccattaaatgca 25465268  T
Q  103 caagttccaatgcaaagttactattttaaatttcttaacatgtgcaaat 151  Q
    |||||||||||||||| |||||||||| || ||||||||||||||||||    
T  25465269 caagttccaatgcaaatttactattttgaacttcttaacatgtgcaaat 25465317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 51382380 - 51382450
Alignment:
Q  1 aacatgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattg-aaatcaacaattattt 70  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||| |||| ||| ||||||||||||    
T  51382380 aacatgtgcaatattgcacatgttaaggtaactaaaagtagtaacttttcattgaaaaccaacaattattt 51382450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 8062213 - 8062282
Alignment:
Q  1 aacatgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattg-aaatcaacaattatt 69  Q
    |||||||||||||||| ||||||||||||||||||||||||||| |||| |||| |||||||||||||||    
T  8062213 aacatgtgcaatattgaacatgttaaggtaactaaaagtagtaacttttcattgaaaatcaacaattatt 8062282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 151
Target Start/End: Original strand, 30171887 - 30172038
Alignment:
Q  1 aacatgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattgaaat-caacaattatttaacagaaagttatacatttaatacaaaat 99  Q
    ||||||||||| |||||||||||||||  | ||||||||||||| ||||||||||||  ||| | |||||||  | |||| || | ||||||||  ||||    
T  30171887 aacatgtgcaacattgcacatgttaagacatctaaaagtagtaattttttattgaaaaacaaaacttatttattaaaaagctacatatttaatatgaaat 30171986  T
Q  100 attcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaat 151  Q
       ||||||||||  ||||||||| | |||||| ||||||||||||||||||    
T  30171987 gcacaagttccaagtcaaagttaccactttaaacttcttaacatgtgcaaat 30172038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 151
Target Start/End: Original strand, 30187428 - 30187579
Alignment:
Q  1 aacatgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattgaaat-caacaattatttaacagaaagttatacatttaatacaaaat 99  Q
    ||||||||||| |||||||||||||||  | ||||||||||||| ||||||||||||  ||| | |||||||  | |||| || | ||||||||  ||||    
T  30187428 aacatgtgcaacattgcacatgttaagacatctaaaagtagtaattttttattgaaaaacaaaacttatttattaaaaagctacatatttaatatgaaat 30187527  T
Q  100 attcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaat 151  Q
       ||||||||||  ||||||||| | |||||| ||||||||||||||||||    
T  30187528 gcacaagttccaagtcaaagttaccactttaaacttcttaacatgtgcaaat 30187579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 3 - 151
Target Start/End: Original strand, 22167345 - 22167494
Alignment:
Q  3 catgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattgaaat-caacaattatttaa-cagaaagttatacatttaatacaaaata 100  Q
    ||||||||| ||||||||||||||   |||||| |||||||| ||||| ||||||  |||||||||||||  || ||| || || ||||||||  ||||     
T  22167345 catgtgcaacattgcacatgttaaaacaactaatagtagtaactttttcttgaaaaacaacaattatttattcaaaaaatt-tatatttaatattaaatg 22167443  T
Q  101 ttcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaat 151  Q
    | ||||||||||| ||||||| |||||||||| |||||| |||||||||||    
T  22167444 tacaagttccaatacaaagtttctattttaaacttcttatcatgtgcaaat 22167494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 14 - 151
Target Start/End: Complemental strand, 30363152 - 30363014
Alignment:
Q  14 ttgcacatgttaaggtaactaaaagtagtaagtttttattgaaatc-aacaattatttaacagaaagttatacatttaatacaaaatattcaagttccaa 112  Q
    |||||||||||||||  ||||||| |||||| |||||||||||| | |||||||| |||  | |||  || | |||||||| |||||   ||||||||||    
T  30363152 ttgcacatgttaaggctactaaaaatagtaactttttattgaaaaccaacaattaattattaaaaacctacatatttaatataaaatgcacaagttccaa 30363053  T
Q  113 tgcaaagttactattttaaatttcttaacatgtgcaaat 151  Q
      ||||||||||||||||||||| ||| |||||||||||    
T  30363052 gtcaaagttactattttaaatttgttatcatgtgcaaat 30363014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 136
Target Start/End: Complemental strand, 34050453 - 34050317
Alignment:
Q  1 aacatgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattg-aaatcaacaattatttaacagaaagttatacatttaatacaaaat 99  Q
    |||||||||||||||||||||||||| | ||| |||||||  || || |||||| ||| ||||||||||||| || ||| ||||| ||| |||| |||||    
T  34050453 aacatgtgcaatattgcacatgttaaagcaaccaaaagtaacaaattattattgaaaaacaacaattatttatcaaaaaattatatattaaatataaaat 34050354  T
Q  100 attcaagttccaatgcaaagttactattttaaatttc 136  Q
     |  ||||| |||| |||| ||| |||||||||||||    
T  34050353 gtaaaagtttcaatacaaaattattattttaaatttc 34050317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 151
Target Start/End: Complemental strand, 29635918 - 29635767
Alignment:
Q  1 aacatgtgcaatattgcacatgttaaggtaactaaaagtagtaagttttt-attgaaatcaacaattatttaacagaaagttatacatttaatacaaaat 99  Q
    |||||||||||||||| | || |||| |  ||||||||| |||| ||||| ||| |||   | |||||||||  | |||||||||  || ||||||||||    
T  29635918 aacatgtgcaatattgtatatattaaagagactaaaagtggtaaattttttattaaaaatgataattatttattaaaaagttatatgttaaatacaaaat 29635819  T
Q  100 attcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaat 151  Q
    || |||||| ||||  |||||||||||||||||||| ||||||||| |||||    
T  29635818 atacaagtttcaatataaagttactattttaaattttttaacatgtacaaat 29635767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 34801976 - 34802032
Alignment:
Q  1 aacatgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattgaaa 57  Q
    ||||||||||| ||||||||||||||| || ||||||||||||| ||||||||||||    
T  34801976 aacatgtgcaacattgcacatgttaagatatctaaaagtagtaattttttattgaaa 34802032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 151
Target Start/End: Original strand, 6180194 - 6180345
Alignment:
Q  1 aacatgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattg-aaatcaacaattatttaacagaaagttatacatttaatacaaaat 99  Q
    ||||||||||| ||||||||||||||   |||||| |||||||| ||||| ||| |||   | |||||||||    |||||| || ||||||||  ||||    
T  6180194 aacatgtgcaacattgcacatgttaaaacaactaatagtagtaactttttcttggaaaattataattatttatttaaaagttttatatttaatattaaat 6180293  T
Q  100 attcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaat 151  Q
     | |||||||||||  ||| || |||||||||| ||||||||||||||||||    
T  6180294 gtacaagttccaatataaaatttctattttaaacttcttaacatgtgcaaat 6180345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 151
Target Start/End: Original strand, 6307511 - 6307661
Alignment:
Q  1 aacatgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttatt-gaaatcaacaattatttaacagaaagttatacatttaatacaaaat 99  Q
    ||||||||||| |||||| ||||||| |||||||||||  | || | |||||| |||| |||||||||||||  | ||| ||||| | |||||| |||||    
T  6307511 aacatgtgcaaaattgcatatgttaaagtaactaaaagcggcaactatttattggaaaacaacaattatttattaaaaatttatata-ttaatagaaaat 6307609  T
Q  100 attcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaat 151  Q
    |  ||||||||||  ||||  || || |||||| ||||||||||||||||||    
T  6307610 acacaagttccaaatcaaacatattactttaaacttcttaacatgtgcaaat 6307661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 151
Target Start/End: Original strand, 13321884 - 13322035
Alignment:
Q  1 aacatgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattg-aaatcaacaattatttaacagaaagttatacatttaatacaaaat 99  Q
    ||||||||||| |||| |||||||||   |||||| |||||||| ||||| ||| ||| ||||||||||||     |||||| || ||||||||  ||||    
T  13321884 aacatgtgcaacattgtacatgttaaaacaactaatagtagtaactttttcttgaaaaacaacaattattttttcaaaagttttatatttaatattaaat 13321983  T
Q  100 attcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaat 151  Q
     | ||| ||||||| |||| || |||||||||| |||||||||| |||||||    
T  13321984 gtacaaattccaatacaaaatttctattttaaacttcttaacatatgcaaat 13322035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 37 - 145
Target Start/End: Original strand, 19277832 - 19277934
Alignment:
Q  37 agtagtaagtttttattgaaat-caacaattatttaacagaaagttatacatttaatacaaaatattcaagttccaatgcaaagttactattttaaattt 135  Q
    |||||||||||||||||||||  |||||||||||||  | |||||||       |||||||||||| || ||||||||||||| ||||||||||||| ||    
T  19277832 agtagtaagtttttattgaaaaacaacaattatttattaaaaagtta-------aatacaaaatatacacgttccaatgcaaaattactattttaaactt 19277924  T
Q  136 cttaacatgt 145  Q
    || |||||||    
T  19277925 ctgaacatgt 19277934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 151
Target Start/End: Original strand, 35512733 - 35512884
Alignment:
Q  1 aacatgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattg-aaatcaacaattatttaacagaaagttatacatttaatacaaaat 99  Q
    ||||||||||| |||||| |||||||   |||||| |||||||| ||||| ||| ||| ||||| |||| ||    |||||| || ||||||||  ||||    
T  35512733 aacatgtgcaacattgcaaatgttaaaacaactaatagtagtaactttttcttggaaaacaacatttatatattcaaaagttttatatttaatattaaat 35512832  T
Q  100 attcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaat 151  Q
     | |||||||||||  ||| || |||||||||| ||||||||||||||||||    
T  35512833 gtgcaagttccaatataaaatttctattttaaacttcttaacatgtgcaaat 35512884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 151
Target Start/End: Original strand, 38812748 - 38812899
Alignment:
Q  1 aacatgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttatt-gaaatcaacaattatttaacagaaagttatacatttaatacaaaat 99  Q
    ||||||||||| |||| |||||||||   |||||| |||||||| ||||| || |||| |||||||||||||    |||||| || ||||||||  ||||    
T  38812748 aacatgtgcaacattgtacatgttaaaacaactaatagtagtaactttttcttagaaaacaacaattatttattcaaaagttttatatttaatattaaat 38812847  T
Q  100 attcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaat 151  Q
     | |||||| ||||  ||| || ||||||| || ||||||||||||||||||    
T  38812848 gtacaagtttcaatataaaatttctattttgaacttcttaacatgtgcaaat 38812899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 43317498 - 43317568
Alignment:
Q  1 aacatgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattgaaatcaacaattattta 71  Q
    |||||||||||||||| ||||||||| | ||||||||||||||| | ||| |||||| ||||||| |||||    
T  43317498 aacatgtgcaatattgtacatgttaaagcaactaaaagtagtaactattttttgaaaacaacaatcattta 43317568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 86 - 151
Target Start/End: Original strand, 1366141 - 1366206
Alignment:
Q  86 atttaatacaaaatattcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaat 151  Q
    ||||||||| |||| ||||| ||||||| |||| ||||||||||||||||||| ||||||| ||||    
T  1366141 atttaatactaaatgttcaaattccaatacaaaattactattttaaatttctttacatgtgtaaat 1366206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 32716332 - 32716263
Alignment:
Q  1 aacatgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattgaaatc-aacaattatt 69  Q
    |||||||||||||||||||||||||||||||||||| | ||||| ||||  |||||| | ||||||||||    
T  32716332 aacatgtgcaatattgcacatgttaaggtaactaaatgaagtaacttttcgttgaaaacaaacaattatt 32716263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 151
Target Start/End: Complemental strand, 23378674 - 23378521
Alignment:
Q  1 aacatgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattgaaatcaacaattatttaacagaaagtta---tacatttaatacaaa 97  Q
    ||||||||||||||| || |||||||   |||||||| || ||| ||||||||||||  |||||||||||   | |||||||   || |||||||| |||    
T  23378674 aacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaataacaattatttgttaaaaagttacactatatttaatataaa 23378575  T
Q  98 atattcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaat 151  Q
    || | ||| |  |||| |||| |||||||||| || |||||||||||| |||||    
T  23378574 atgtacaaatagcaattcaaatttactattttgaaattcttaacatgttcaaat 23378521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 138
Target Start/End: Complemental strand, 39627741 - 39627603
Alignment:
Q  1 aacatgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattg-aaatcaacaattatttaacagaaagttatacatttaatacaaaat 99  Q
    ||||||||||||||| |||||||||||| |||||||| ||| || |||| |||| ||| ||||||| | |||    ||||||| | |||||||| |||||    
T  39627741 aacatgtgcaatattacacatgttaaggaaactaaaaatagcaacttttaattgaaaaacaacaatcacttattgaaaagttacatatttaatataaaat 39627642  T
Q  100 attcaagttccaatgcaaagttactattttaaatttctt 138  Q
       |||||| |||| |||| |||||||||| || |||||    
T  39627641 gcacaagttacaatacaaatttactattttgaacttctt 39627603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 60 - 150
Target Start/End: Original strand, 52337834 - 52337924
Alignment:
Q  60 aacaattatttaacagaaagttatacatttaatacaaaatattcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaa 150  Q
    ||||||||||||  | ||| ||||| |||||||| ||||||   ||||| ||||||| | ||||||||||||| |||||||||||| ||||    
T  52337834 aacaattatttattaaaaatttatatatttaatataaaatacataagttgcaatgcatatttactattttaaacttcttaacatgttcaaa 52337924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 62 - 151
Target Start/End: Original strand, 9516651 - 9516740
Alignment:
Q  62 caattatttaacagaaagttatacatttaatacaaaatattcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaat 151  Q
    ||||||||||  | ||||||||| |||||||| ||||||  ||||||  ||   ||| |||| |||||||||||||||||||||||||||    
T  9516651 caattatttattaaaaagttatatatttaatataaaatacacaagttataagagaaacttaccattttaaatttcttaacatgtgcaaat 9516740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 36578340 - 36578392
Alignment:
Q  1 aacatgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttatt 53  Q
    |||||||||||||||||||||||||| | || |||||||||||| || |||||    
T  36578340 aacatgtgcaatattgcacatgttaaagcaattaaaagtagtaatttcttatt 36578392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 38539095 - 38539135
Alignment:
Q  1 aacatgtgcaatattgcacatgttaaggtaactaaaagtag 41  Q
    |||||||||||||||||||||||||||| ||||||| ||||    
T  38539095 aacatgtgcaatattgcacatgttaaggaaactaaatgtag 38539135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 38561313 - 38561353
Alignment:
Q  1 aacatgtgcaatattgcacatgttaaggtaactaaaagtag 41  Q
    |||||||||||||||||||||||||||| ||||||| ||||    
T  38561313 aacatgtgcaatattgcacatgttaaggaaactaaatgtag 38561353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 22331631 - 22331702
Alignment:
Q  1 aacatgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattg-aaatcaacaattattta 71  Q
    ||||||||||| ||||||||||||||  || |||| |||||||| ||||| ||| ||| |||||||||||||    
T  22331631 aacatgtgcaacattgcacatgttaaaatatctaatagtagtaactttttcttgaaaaacaacaattattta 22331702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 86 - 145
Target Start/End: Original strand, 51467547 - 51467606
Alignment:
Q  86 atttaatacaaaatattcaagttccaatgcaaagttactattttaaatttcttaacatgt 145  Q
    ||||||||  |||| | ||||||||||| |||| || |||||||||||||||||||||||    
T  51467547 atttaatattaaatgtacaagttccaatacaaacttcctattttaaatttcttaacatgt 51467606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 105 - 151
Target Start/End: Original strand, 32201737 - 32201783
Alignment:
Q  105 agttccaatgcaaagttactattttaaatttcttaacatgtgcaaat 151  Q
    |||||||||||||| ||| ||||||||| ||||||| ||||||||||    
T  32201737 agttccaatgcaaatttattattttaaacttcttaatatgtgcaaat 32201783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 86 - 151
Target Start/End: Complemental strand, 6570069 - 6570004
Alignment:
Q  86 atttaatacaaaatattcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaat 151  Q
    |||||||| |||| |  ||||||||||   |||||||||| |||||| ||||||||||||||||||    
T  6570069 atttaatataaaaaacacaagttccaagttaaagttactactttaaacttcttaacatgtgcaaat 6570004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 3 - 71
Target Start/End: Complemental strand, 11744996 - 11744927
Alignment:
Q  3 catgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattg-aaatcaacaattattta 71  Q
    |||||||||| ||||||||||||| | || ||||||||  || ||||||||| ||| |||||||||||||    
T  11744996 catgtgcaatgttgcacatgttaaagaaattaaaagtataaactttttattgaaaaacaacaattattta 11744927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 57
Target Start/End: Complemental strand, 40799425 - 40799372
Alignment:
Q  4 atgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattgaaa 57  Q
    ||||||||||||||||||||||  | |||||||||||  || ||||||||||||    
T  40799425 atgtgcaatattgcacatgttagagcaactaaaagtatgaactttttattgaaa 40799372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 9661905 - 9661961
Alignment:
Q  1 aacatgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattgaaa 57  Q
    |||||||||||  |||||||||||||||  |||||||| || || ||||||||||||    
T  9661905 aacatgtgcaaatttgcacatgttaaggatactaaaagaagcaactttttattgaaa 9661961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 115 - 151
Target Start/End: Original strand, 13241880 - 13241916
Alignment:
Q  115 caaagttactattttaaatttcttaacatgtgcaaat 151  Q
    |||| |||| |||||||||||||||||||||||||||    
T  13241880 caaacttaccattttaaatttcttaacatgtgcaaat 13241916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 103 - 151
Target Start/End: Original strand, 28016291 - 28016339
Alignment:
Q  103 caagttccaatgcaaagttactattttaaatttcttaacatgtgcaaat 151  Q
    ||||||||||| |||| ||  ||||||||| ||||||||||||||||||    
T  28016291 caagttccaatacaaaatttatattttaaaattcttaacatgtgcaaat 28016339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 42589181 - 42589237
Alignment:
Q  1 aacatgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattgaaa 57  Q
    |||||||||||  |||||||||||||||  |||||||| || || ||||||||||||    
T  42589181 aacatgtgcaaatttgcacatgttaaggatactaaaagaagcaactttttattgaaa 42589237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 44012934 - 44012990
Alignment:
Q  1 aacatgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattgaaa 57  Q
    |||||||||||  |||||||||||||||  |||||||| || || ||||||||||||    
T  44012934 aacatgtgcaaatttgcacatgttaaggatactaaaagaagcaactttttattgaaa 44012990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0061 (Bit Score: 76; Significance: 4e-35; HSPs: 1)
Name: scaffold0061
Description:

Target: scaffold0061; HSP #1
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 1 - 151
Target Start/End: Complemental strand, 52948 - 52798
Alignment:
Q  1 aacatgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattg-aaatcaacaattatttaacagaaagttatacatttaatacaaaat 99  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||| |||| ||| ||||||||||| |  | ||||||| | |||||||||||||     
T  52948 aacatgtgcaatattgcacatgttaaggtaactaaaagtagtaacttttcattgaaaaccaacaattattgatta-aaagttacatatttaatacaaaaa 52850  T
Q  100 attcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaat 151  Q
    |  ||||||||||  ||||||||||| |||||| ||||||||||||||||||    
T  52849 acacaagttccaagtcaaagttactactttaaacttcttaacatgtgcaaat 52798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 76; Significance: 4e-35; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 1 - 151
Target Start/End: Original strand, 145686 - 145836
Alignment:
Q  1 aacatgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattg-aaatcaacaattatttaacagaaagttatacatttaatacaaaat 99  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||| |||| ||| ||||||||||| |  | ||||||| | |||||||||||||     
T  145686 aacatgtgcaatattgcacatgttaaggtaactaaaagtagtaacttttcattgaaaaccaacaattattgatta-aaagttacatatttaatacaaaaa 145784  T
Q  100 attcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaat 151  Q
    |  ||||||||||  ||||||||||| |||||| ||||||||||||||||||    
T  145785 acacaagttccaagtcaaagttactactttaaacttcttaacatgtgcaaat 145836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 60; Significance: 2e-25; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 1 - 151
Target Start/End: Complemental strand, 94188 - 94037
Alignment:
Q  1 aacatgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattgaaatc-aacaattatttaacagaaagttatacatttaatacaaaat 99  Q
    ||||| ||||| ||||||||||||||   |||||||||||||||||||||||||||| | || |||||||||  | |||  |||| ||||||||||||||    
T  94188 aacatatgcaacattgcacatgttaaatcaactaaaagtagtaagtttttattgaaaactaataattatttattaaaaaactatatatttaatacaaaat 94089  T
Q  100 attcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaat 151  Q
     |  ||||||||||| ||||||| ||||| ||| |||||||||| |||||||    
T  94088 gtataagttccaatgtaaagttagtatttaaaacttcttaacatatgcaaat 94037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 56; Significance: 4e-23; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 1 - 151
Target Start/End: Original strand, 13094 - 13244
Alignment:
Q  1 aacatgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattg-aaatcaacaattatttaacagaaagttatacatttaatacaaaat 99  Q
    |||||||||||||||||| ||||||||||||||||||||||||| |||| |||| ||| |||||||| || |  | |||| || | |||||||| ||||     
T  13094 aacatgtgcaatattgcatatgttaaggtaactaaaagtagtaatttttcattgaaaaccaacaattgttgatta-aaagctacatatttaatataaaaa 13192  T
Q  100 attcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaat 151  Q
    |  ||| ||||||   ||||||||||||||||| ||||||||||||||||||    
T  13193 acacaaattccaaattaaagttactattttaaacttcttaacatgtgcaaat 13244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0111 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0111
Description:

Target: scaffold0111; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 151
Target Start/End: Complemental strand, 37284 - 37133
Alignment:
Q  1 aacatgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattgaaat-caacaattatttaacagaaagttatacatttaatacaaaat 99  Q
    ||||||||||| ||||||||||||||| || ||||||||||||| ||||||||||||  ||| | |||||||  | |||| || | ||||||||  ||||    
T  37284 aacatgtgcaacattgcacatgttaagatatctaaaagtagtaattttttattgaaaaacaaaacttatttattaaaaagctacatatttaatatgaaat 37185  T
Q  100 attcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaat 151  Q
       ||||||||||  ||||||||  | |||||| ||||||||||||||||||    
T  37184 gcacaagttccaagtcaaagttatcactttaaacttcttaacatgtgcaaat 37133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0727 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0727
Description:

Target: scaffold0727; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 5699 - 5769
Alignment:
Q  1 aacatgtgcaatattgcacatgttaaggtaactaaaagtagtaa-gtttttattg-aaatcaacaattatt 69  Q
    ||||||||||||||||||||||||||||||||||||| ||||||  ||||||||| ||| |||||||||||    
T  5699 aacatgtgcaatattgcacatgttaaggtaactaaaaatagtaatttttttattgaaaaccaacaattatt 5769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0618 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 1)
Name: scaffold0618
Description:

Target: scaffold0618; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 34 - 151
Target Start/End: Complemental strand, 8550 - 8433
Alignment:
Q  34 aaaagtagtaagtttttattgaaatcaacaattatttaacagaaagttatacatttaatacaaaatattcaagttccaatgcaaagttactattttaaat 133  Q
    ||||||| ||| |||||||||||| |||||||||||||  | |||  || | |||||||| |||||   ||||||| ||  ||||||||||| |||||||    
T  8550 aaaagtattaattttttattgaaaacaacaattatttattaaaaaactacaaatttaatataaaatgcacaagttctaaatcaaagttactactttaaat 8451  T
Q  134 ttcttaacatgtgcaaat 151  Q
    |||||||||| |||||||    
T  8450 ttcttaacatatgcaaat 8433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0305 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 2)
Name: scaffold0305
Description:

Target: scaffold0305; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 14 - 151
Target Start/End: Complemental strand, 17946 - 17807
Alignment:
Q  14 ttgcacatgttaaggtaa-ctaaaagtagtaagtttttattgaaatc-aacaattatttaacagaaagttatacatttaatacaaaatattcaagttcca 111  Q
    ||||||||||||| | || |||||||||  ||| |||||||||||   ||||||||||||  | ||| |||||  ||||||||||||| | |||||||||    
T  17946 ttgcacatgttaaagcaaactaaaagtaacaagcttttattgaaaaataacaattatttattaaaaatttatatctttaatacaaaatgtacaagttcca 17847  T
Q  112 atgcaaagttactattttaaatttcttaacatgtgcaaat 151  Q
    ||  |||||||||||||| || ||  ||||||||||||||    
T  17846 atataaagttactatttttaacttaataacatgtgcaaat 17807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0305; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 14 - 151
Target Start/End: Complemental strand, 18153 - 18015
Alignment:
Q  14 ttgcacatgttaaggtaactaaaagtagtaagtttttattgaaat-caacaattatttaacagaaagttatacatttaatacaaaatattcaagttccaa 112  Q
    |||||| |||||| | || |||||||||||| | || ||| |||  |||||||||||||  ||||||||||| |||||||| ||||| | ||| ||||||    
T  18153 ttgcacgtgttaaaggaattaaaagtagtaactcttaattaaaaaacaacaattatttattagaaagttatatatttaatataaaatgtacaaattccaa 18054  T
Q  113 tgcaaagttactattttaaatttcttaacatgtgcaaat 151  Q
    | ||||  ||||||||| ||  | |||||| ||||||||    
T  18053 tacaaacatactattttgaacattttaacacgtgcaaat 18015  T

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Target: scaffold0229 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0229
Description:

Target: scaffold0229; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 86 - 151
Target Start/End: Complemental strand, 24611 - 24546
Alignment:
Q  86 atttaatacaaaatattcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaat 151  Q
    ||||||||| |||| ||||| ||||||| |||| ||||||||||||||||||| ||||||| ||||    
T  24611 atttaatactaaatgttcaaattccaatacaaaattactattttaaatttctttacatgtgtaaat 24546  T

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Target: scaffold0155 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0155
Description:

Target: scaffold0155; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 12 - 151
Target Start/End: Complemental strand, 3572 - 3432
Alignment:
Q  12 tattgcacatgttaaggtaactaaaagtagtaagttttt-att-gaaatcaacaattatttaacagaaagttatacatttaatacaaaatattcaagttc 109  Q
    ||||||||||||||| ||||||||||||||||| ||||| |||  ||| ||||||||||| |  | ||||||| | |||||||| |||| |   ||||||    
T  3572 tattgcacatgttaatgtaactaaaagtagtaactttttcattaaaaaccaacaattattgatta-aaagttacatatttaatataaaaaacataagttc 3474  T
Q  110 caatgcaaagttactattttaaatttcttaacatgtgcaaat 151  Q
    ||||  ||||| |||| |||||| ||||||| ||||||||||    
T  3473 caatttaaagtaactactttaaacttcttaatatgtgcaaat 3432  T

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Target: scaffold0073 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0073
Description:

Target: scaffold0073; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 151
Target Start/End: Complemental strand, 16704 - 16554
Alignment:
Q  1 aacatgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattg-aaatcaacaattatttaacagaaagttatacatttaatacaaaat 99  Q
    ||||| ||||| |||||| ||||||| |||||||||||  | || | ||||||| ||| |||||||||||||  | ||| ||||| ||| |||| |||||    
T  16704 aacatttgcaaaattgcatatgttaaagtaactaaaagcggcaactatttattggaaaacaacaattatttattaaaaatttatatatt-aatagaaaat 16606  T
Q  100 attcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaat 151  Q
    |  ||||||||||  ||||  || || |||||| ||||||||||||||||||    
T  16605 acacaagttccaaatcaaacatattactttaaacttcttaacatgtgcaaat 16554  T

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Target: scaffold0009 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 8 - 98
Target Start/End: Original strand, 43479 - 43568
Alignment:
Q  8 gcaatattgcacatgttaaggtaactaaaagtagtaagtttttattg-aaatcaacaattatttaacagaaagttatacatttaatacaaaa 98  Q
    |||||||||||| ||||||||||| |||||||||||| |||| |||| ||||||||||||| ||||   ||||||||| |||||||| ||||    
T  43479 gcaatattgcacgtgttaaggtaa-taaaagtagtaatttttcattgaaaatcaacaatta-ttaattaaaagttatatatttaatataaaa 43568  T

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Target: scaffold0192 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0192
Description:

Target: scaffold0192; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 103 - 151
Target Start/End: Complemental strand, 13630 - 13582
Alignment:
Q  103 caagttccaatgcaaagttactattttaaatttcttaacatgtgcaaat 151  Q
    |||||| ||||||||| |||||| |||||| ||||||||||||||||||    
T  13630 caagtttcaatgcaaacttactaatttaaacttcttaacatgtgcaaat 13582  T

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Target: scaffold0631 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0631
Description:

Target: scaffold0631; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 450 - 492
Alignment:
Q  1 aacatgtgcaatattgcacatgttaaggtaactaaaagtagta 43  Q
    ||||||||||||||||||||||||||   ||||||||||||||    
T  450 aacatgtgcaatattgcacatgttaaatcaactaaaagtagta 492  T

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Target: scaffold0128 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0128
Description:

Target: scaffold0128; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 90 - 151
Target Start/End: Complemental strand, 44374 - 44313
Alignment:
Q  90 aatacaaaatattcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaat 151  Q
    |||| ||||||| |||||| ||||||||||||  ||||||||| || |||| ||||||||||    
T  44374 aataaaaaatatacaagtttcaatgcaaagttgttattttaaactttttaatatgtgcaaat 44313  T

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Target: scaffold0129 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0129
Description:

Target: scaffold0129; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 132
Target Start/End: Complemental strand, 13828 - 13696
Alignment:
Q  1 aacatgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttatt-gaaatcaacaattatttaacagaaagttatacatttaatacaaaat 99  Q
    ||||||||||| ||||||||||||||   |||||| |||||||| ||||| || |||| ||| | |||||||    |||||| || ||||||||   |||    
T  13828 aacatgtgcaacattgcacatgttaaaacaactaatagtagtaactttttcttggaaaacaaaagttatttatttaaaagttttatatttaatatttaat 13729  T
Q  100 attcaagttccaatgcaaagttactattttaaa 132  Q
     | ||||||||||| |||| || ||||||||||    
T  13728 gtacaagttccaatacaaaatttctattttaaa 13696  T

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Target: scaffold0018 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 28 - 151
Target Start/End: Original strand, 182079 - 182201
Alignment:
Q  28 gtaactaaaagtagtaagtttttattgaaatc-aacaattatttaacagaaagttatacatttaatacaaaatattcaagttccaatgcaaagttactat 126  Q
    ||||| ||||||||||| |||||||||||| | ||||||||||||  | ||||||| | |||||||| |||| |  |||||| |||  ||| | |||||     
T  182079 gtaaccaaaagtagtaattttttattgaaaacaaacaattatttatta-aaagttacatatttaatataaaaaacacaagtttcaaatcaacg-tactac 182176  T
Q  127 tttaaatttcttaacatgtgcaaat 151  Q
    |||||| |||||||||||| |||||    
T  182177 tttaaacttcttaacatgtacaaat 182201  T

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