View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1537_high_1 (Length: 316)
Name: NF1537_high_1
Description: NF1537
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1537_high_1 |
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Alignment Details
Target: chr5 (Bit Score: 233; Significance: 1e-129; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 233; E-Value: 1e-129
Query Start/End: Original strand, 39 - 300
Target Start/End: Original strand, 8500993 - 8501262
Alignment:
| Q |
39 |
gaattaaaagcaaacatgatttgaatataatttacattaactatttcttttatcaattatattagggcattgactcaaaaacaggaatt--------tct |
130 |
Q |
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| T |
8500993 |
gaattaatagcaaacatgatttgaatatcatttacattaactatttcttttatcaattatattagggcattgactcaaaaacaggaatttccaaatttct |
8501092 |
T |
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| Q |
131 |
aatcgattgttttcaacttaaggaattattgatggtttggccaaaaaataccatggaccaaacacgtgtgttgataagcataagctgaaatcaaatgcaa |
230 |
Q |
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| T |
8501093 |
aatcgattgttttcaacttaaggaattattgatggtttggccaaaaaataccatggaccaaacacgtgtgttgataagcataagctgaaatcaaatgcaa |
8501192 |
T |
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| Q |
231 |
gggtcaactaatttaaaaagaagaaaagattaaataaccatatactcaatttagtgctcaaccacgaatg |
300 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
8501193 |
gggtcaactaatttaaaaagaagaaaagattaaataaccatatactcaatttagtgctcaaccacgaatg |
8501262 |
T |
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