View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF15380_low_3 (Length: 425)

Name: NF15380_low_3
Description: NF15380
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF15380_low_3
NF15380_low_3
[»] scaffold0003 (2 HSPs)
scaffold0003 (329-425)||(359217-359313)
scaffold0003 (191-257)||(359082-359148)
[»] scaffold0018 (1 HSPs)
scaffold0018 (97-136)||(163814-163853)
[»] chr8 (22 HSPs)
chr8 (97-136)||(23085915-23085954)
chr8 (97-136)||(37198125-37198164)
chr8 (95-136)||(23830955-23830996)
chr8 (96-136)||(1276534-1276574)
chr8 (97-136)||(23828139-23828178)
chr8 (97-136)||(30439054-30439093)
chr8 (97-136)||(32062872-32062911)
chr8 (97-136)||(37410084-37410123)
chr8 (56-131)||(37197877-37197952)
chr8 (95-136)||(23838352-23838393)
chr8 (59-132)||(27853644-27853717)
chr8 (59-136)||(38111399-38111476)
chr8 (97-136)||(1197933-1197972)
chr8 (97-136)||(3459147-3459186)
chr8 (97-136)||(13797497-13797536)
chr8 (59-135)||(23960556-23960632)
chr8 (97-136)||(23960812-23960851)
chr8 (97-136)||(34947531-34947570)
chr8 (97-136)||(35617737-35617776)
chr8 (97-136)||(39922100-39922139)
chr8 (97-127)||(3990209-3990239)
chr8 (98-136)||(18308258-18308296)
[»] chr2 (16 HSPs)
chr2 (354-425)||(7112966-7113036)
chr2 (97-136)||(10129509-10129548)
chr2 (59-136)||(28612207-28612284)
chr2 (97-136)||(5001711-5001750)
chr2 (97-136)||(29549846-29549885)
chr2 (97-136)||(41995765-41995804)
chr2 (97-135)||(28612669-28612707)
chr2 (103-136)||(5001392-5001425)
chr2 (103-136)||(5013062-5013095)
chr2 (97-136)||(12896438-12896477)
chr2 (97-136)||(44543727-44543766)
chr2 (97-131)||(19640367-19640401)
chr2 (97-131)||(19838960-19838994)
chr2 (98-136)||(41326424-41326462)
chr2 (103-136)||(28611826-28611859)
chr2 (103-132)||(28612039-28612068)
[»] chr1 (30 HSPs)
chr1 (97-136)||(27296217-27296256)
chr1 (97-136)||(44099682-44099721)
chr1 (97-136)||(51272504-51272543)
chr1 (59-136)||(318610-318687)
chr1 (100-136)||(28950274-28950310)
chr1 (59-136)||(44263144-44263221)
chr1 (97-136)||(1156077-1156116)
chr1 (97-136)||(3227235-3227274)
chr1 (97-136)||(5428583-5428622)
chr1 (97-136)||(16165698-16165737)
chr1 (97-136)||(21617811-21617850)
chr1 (97-136)||(42492177-42492216)
chr1 (97-136)||(42497303-42497342)
chr1 (97-136)||(45417612-45417651)
chr1 (97-136)||(51114145-51114184)
chr1 (97-135)||(5429108-5429146)
chr1 (98-136)||(24595283-24595321)
chr1 (59-136)||(1647598-1647675)
chr1 (97-132)||(6537667-6537702)
chr1 (97-136)||(12115360-12115399)
chr1 (97-132)||(27296396-27296431)
chr1 (97-136)||(28949904-28949943)
chr1 (97-136)||(38684070-38684109)
chr1 (97-136)||(42497123-42497162)
chr1 (97-136)||(44262719-44262758)
chr1 (97-136)||(44263365-44263404)
chr1 (97-136)||(51113778-51113817)
chr1 (97-132)||(51113965-51114000)
chr1 (97-134)||(5428990-5429027)
chr1 (103-132)||(33375689-33375718)
[»] chr3 (22 HSPs)
chr3 (91-136)||(38887584-38887629)
chr3 (59-136)||(46451525-46451602)
chr3 (59-136)||(47503200-47503277)
chr3 (97-136)||(837215-837254)
chr3 (97-136)||(11453993-11454032)
chr3 (97-136)||(35560157-35560196)
chr3 (97-136)||(36643139-36643178)
chr3 (97-136)||(37760552-37760591)
chr3 (97-136)||(38887377-38887416)
chr3 (98-136)||(18094796-18094834)
chr3 (103-136)||(54274787-54274820)
chr3 (63-136)||(18095011-18095084)
chr3 (59-136)||(47503027-47503104)
chr3 (97-136)||(11454618-11454657)
chr3 (97-136)||(38887807-38887846)
chr3 (97-136)||(40050905-40050944)
chr3 (97-136)||(43017326-43017365)
chr3 (97-136)||(46451338-46451377)
chr3 (97-136)||(53047599-53047638)
chr3 (103-136)||(11454438-11454471)
chr3 (103-136)||(24365789-24365822)
chr3 (103-136)||(47519981-47520014)
[»] chr7 (39 HSPs)
chr7 (59-136)||(16671660-16671737)
chr7 (59-136)||(17646028-17646105)
chr7 (59-136)||(18486689-18486766)
chr7 (59-136)||(23591387-23591464)
chr7 (59-136)||(35124780-35124857)
chr7 (97-136)||(1566519-1566558)
chr7 (97-136)||(4680907-4680946)
chr7 (97-136)||(4681156-4681195)
chr7 (97-136)||(9141972-9142011)
chr7 (97-136)||(11646408-11646447)
chr7 (97-136)||(11650019-11650058)
chr7 (97-136)||(18487206-18487245)
chr7 (97-136)||(23591642-23591681)
chr7 (97-136)||(27716320-27716359)
chr7 (97-136)||(40686903-40686942)
chr7 (97-136)||(45419647-45419686)
chr7 (97-136)||(46264294-46264333)
chr7 (97-136)||(48640812-48640851)
chr7 (103-136)||(2526970-2527003)
chr7 (103-136)||(27716548-27716581)
chr7 (91-136)||(40450106-40450151)
chr7 (59-136)||(12140834-12140911)
chr7 (97-136)||(2853228-2853267)
chr7 (97-136)||(4681609-4681648)
chr7 (97-136)||(11645942-11645981)
chr7 (97-136)||(11646220-11646259)
chr7 (97-136)||(16492556-16492595)
chr7 (97-136)||(16671301-16671340)
chr7 (97-136)||(17645669-17645708)
chr7 (97-136)||(19222161-19222200)
chr7 (97-136)||(30991515-30991554)
chr7 (97-136)||(34837243-34837282)
chr7 (97-136)||(43059246-43059285)
chr7 (97-136)||(45419853-45419892)
chr7 (97-136)||(48641027-48641066)
chr7 (97-136)||(48641453-48641492)
chr7 (103-136)||(9142150-9142183)
chr7 (103-136)||(21224193-21224226)
chr7 (108-136)||(2354687-2354715)
[»] chr6 (14 HSPs)
chr6 (59-136)||(9828974-9829051)
chr6 (97-136)||(23622273-23622312)
chr6 (97-136)||(27315341-27315380)
chr6 (97-136)||(27579653-27579692)
chr6 (103-137)||(4811080-4811114)
chr6 (103-136)||(25068243-25068276)
chr6 (97-136)||(808885-808924)
chr6 (97-136)||(17201652-17201691)
chr6 (97-136)||(17202686-17202725)
chr6 (97-136)||(17202905-17202944)
chr6 (97-136)||(17906812-17906851)
chr6 (97-136)||(26832528-26832567)
chr6 (97-133)||(15130957-15130993)
chr6 (97-136)||(32208419-32208459)
[»] chr5 (25 HSPs)
chr5 (59-136)||(11314035-11314112)
chr5 (59-136)||(43394927-43395004)
chr5 (97-136)||(16305401-16305440)
chr5 (97-136)||(16526253-16526292)
chr5 (97-136)||(16528655-16528694)
chr5 (97-136)||(35159758-35159797)
chr5 (97-136)||(41092902-41092941)
chr5 (97-136)||(41093081-41093120)
chr5 (103-136)||(35159472-35159505)
chr5 (97-136)||(7673230-7673269)
chr5 (97-136)||(9488081-9488120)
chr5 (97-132)||(11313699-11313734)
chr5 (97-132)||(11313861-11313896)
chr5 (97-136)||(12442164-12442203)
chr5 (97-136)||(14166194-14166233)
chr5 (97-136)||(16529012-16529051)
chr5 (97-136)||(19121962-19122001)
chr5 (97-136)||(19122298-19122337)
chr5 (97-136)||(24350930-24350969)
chr5 (97-136)||(24351483-24351522)
chr5 (97-136)||(43395142-43395181)
chr5 (98-136)||(26523268-26523306)
chr5 (107-136)||(24326580-24326609)
chr5 (107-136)||(24350732-24350761)
chr5 (107-136)||(24351286-24351315)
[»] scaffold0504 (1 HSPs)
scaffold0504 (97-136)||(1545-1584)
[»] chr4 (31 HSPs)
chr4 (97-136)||(4941733-4941772)
chr4 (97-136)||(8118436-8118475)
chr4 (97-136)||(21581288-21581327)
chr4 (97-136)||(22292953-22292992)
chr4 (97-136)||(23952516-23952555)
chr4 (97-136)||(36639227-36639266)
chr4 (97-136)||(47631593-47631632)
chr4 (97-136)||(48076245-48076284)
chr4 (97-136)||(48076423-48076462)
chr4 (98-136)||(22292746-22292784)
chr4 (103-136)||(24049620-24049653)
chr4 (103-136)||(28379779-28379812)
chr4 (59-136)||(52689592-52689669)
chr4 (97-136)||(2177319-2177358)
chr4 (97-136)||(7809403-7809442)
chr4 (97-132)||(8079354-8079389)
chr4 (97-136)||(8118652-8118691)
chr4 (97-136)||(21585568-21585607)
chr4 (105-136)||(24049338-24049369)
chr4 (97-136)||(28379984-28380023)
chr4 (97-136)||(28389783-28389822)
chr4 (97-136)||(43161752-43161791)
chr4 (97-136)||(43161937-43161976)
chr4 (97-136)||(44500727-44500766)
chr4 (97-136)||(47631415-47631454)
chr4 (97-136)||(47769007-47769046)
chr4 (97-136)||(48076600-48076639)
chr4 (97-136)||(53144857-53144896)
chr4 (97-136)||(54653661-54653700)
chr4 (104-136)||(7821574-7821606)
chr4 (97-137)||(8397754-8397794)
[»] scaffold0240 (1 HSPs)
scaffold0240 (59-136)||(13306-13383)
[»] scaffold0013 (1 HSPs)
scaffold0013 (97-136)||(102758-102797)
[»] scaffold0294 (1 HSPs)
scaffold0294 (103-136)||(12403-12436)


Alignment Details
Target: scaffold0003 (Bit Score: 93; Significance: 4e-45; HSPs: 2)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 329 - 425
Target Start/End: Original strand, 359217 - 359313
Alignment:
Q  329 tcagtgtacctcaaacaaaaatggcatagaataaatcacttagattgatattctttcaatttctttgatgataaactccttttcctccttaaattgc 425  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  359217 tcagtgtacctcaaacaaaaatggcatagaataaatcacttagattgatattctttcaatttctttgatgatatactccttttcctccttaaattgc 359313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003; HSP #2
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 191 - 257
Target Start/End: Original strand, 359082 - 359148
Alignment:
Q  191 ggtactctcaatgtacgtacagaaagtaaccaactgaaaagctaacaaatactaaattaaggcaaag 257  Q
    |||||||| ||||||| | |||||||||||||||| |||||||||||||||||| ||||||||||||    
T  359082 ggtactctaaatgtacattcagaaagtaaccaactaaaaagctaacaaatactacattaaggcaaag 359148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 97 - 136
Target Start/End: Original strand, 163814 - 163853
Alignment:
Q  97 aatttattaggttaaataattgcaaacctaataaagcaaa 136  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  163814 aatttattaggttaaataattgcaaacctaataaagcaaa 163853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 22)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 97 - 136
Target Start/End: Complemental strand, 23085954 - 23085915
Alignment:
Q  97 aatttattaggttaaataattgcaaacctaataaagcaaa 136  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  23085954 aatttattaggttaaataattgcaaacctaataaagcaaa 23085915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 97 - 136
Target Start/End: Original strand, 37198125 - 37198164
Alignment:
Q  97 aatttattaggttaaataattgcaaacctaataaagcaaa 136  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  37198125 aatttattaggttaaataattgcaaacctaataaagcaaa 37198164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 95 - 136
Target Start/End: Original strand, 23830955 - 23830996
Alignment:
Q  95 gcaatttattaggttaaataattgcaaacctaataaagcaaa 136  Q
    ||||||| ||||||||||||||||||||||||||||||||||    
T  23830955 gcaatttgttaggttaaataattgcaaacctaataaagcaaa 23830996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 96 - 136
Target Start/End: Original strand, 1276534 - 1276574
Alignment:
Q  96 caatttattaggttaaataattgcaaacctaataaagcaaa 136  Q
    |||||| ||||||||||||||||||||||||||||||||||    
T  1276534 caatttgttaggttaaataattgcaaacctaataaagcaaa 1276574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 97 - 136
Target Start/End: Original strand, 23828139 - 23828178
Alignment:
Q  97 aatttattaggttaaataattgcaaacctaataaagcaaa 136  Q
    ||||| ||||||||||||||||||||||||||||||||||    
T  23828139 aatttgttaggttaaataattgcaaacctaataaagcaaa 23828178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 97 - 136
Target Start/End: Original strand, 30439054 - 30439093
Alignment:
Q  97 aatttattaggttaaataattgcaaacctaataaagcaaa 136  Q
    ||||| ||||||||||||||||||||||||||||||||||    
T  30439054 aatttgttaggttaaataattgcaaacctaataaagcaaa 30439093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 97 - 136
Target Start/End: Complemental strand, 32062911 - 32062872
Alignment:
Q  97 aatttattaggttaaataattgcaaacctaataaagcaaa 136  Q
    ||||| ||||||||||||||||||||||||||||||||||    
T  32062911 aatttgttaggttaaataattgcaaacctaataaagcaaa 32062872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 97 - 136
Target Start/End: Original strand, 37410084 - 37410123
Alignment:
Q  97 aatttattaggttaaataattgcaaacctaataaagcaaa 136  Q
    ||||| ||||||||||||||||||||||||||||||||||    
T  37410084 aatttgttaggttaaataattgcaaacctaataaagcaaa 37410123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 56 - 131
Target Start/End: Original strand, 37197877 - 37197952
Alignment:
Q  56 agaataggaatgaaattggtacgattcannnnnnnagaagcaatttattaggttaaataattgcaaacctaataaa 131  Q
    |||||||||||||||||||| |||| ||       ||| | ||||| |||||||||||||||||||||||||||||    
T  37197877 agaataggaatgaaattggtgcgatgcatttttttagatggaatttgttaggttaaataattgcaaacctaataaa 37197952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 95 - 136
Target Start/End: Original strand, 23838352 - 23838393
Alignment:
Q  95 gcaatttattaggttaaataattgcaaacctaataaagcaaa 136  Q
    ||||||| |||||||||||||||||||| |||||||||||||    
T  23838352 gcaatttgttaggttaaataattgcaaaactaataaagcaaa 23838393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 59 - 132
Target Start/End: Original strand, 27853644 - 27853717
Alignment:
Q  59 ataggaatgaaattggtacgattcannnnnnnagaagcaatttattaggttaaataattgcaaacctaataaag 132  Q
    ||||||||||||||||| |||| ||       ||| | ||||| ||||||||||||||||||||||||||||||    
T  27853644 ataggaatgaaattggtgcgatgcatttttttagatggaatttgttaggttaaataattgcaaacctaataaag 27853717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 59 - 136
Target Start/End: Complemental strand, 38111476 - 38111399
Alignment:
Q  59 ataggaatgaaattggtacgattcannnnnnnagaagcaatttattaggttaaataattgcaaacctaataaagcaaa 136  Q
    ||||||||||||||||| |||| ||       ||| | ||||| || |||||||||||||||||||||||||||||||    
T  38111476 ataggaatgaaattggtgcgatgcattttttcagatggaatttgttgggttaaataattgcaaacctaataaagcaaa 38111399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 97 - 136
Target Start/End: Complemental strand, 1197972 - 1197933
Alignment:
Q  97 aatttattaggttaaataattgcaaacctaataaagcaaa 136  Q
    ||||| ||||||||||||||||||| ||||||||||||||    
T  1197972 aatttgttaggttaaataattgcaaccctaataaagcaaa 1197933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 97 - 136
Target Start/End: Original strand, 3459147 - 3459186
Alignment:
Q  97 aatttattaggttaaataattgcaaacctaataaagcaaa 136  Q
    ||||| |||| |||||||||||||||||||||||||||||    
T  3459147 aatttgttagattaaataattgcaaacctaataaagcaaa 3459186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 97 - 136
Target Start/End: Complemental strand, 13797536 - 13797497
Alignment:
Q  97 aatttattaggttaaataattgcaaacctaataaagcaaa 136  Q
    ||||| ||| ||||||||||||||||||||||||||||||    
T  13797536 aatttgttaagttaaataattgcaaacctaataaagcaaa 13797497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 59 - 135
Target Start/End: Original strand, 23960556 - 23960632
Alignment:
Q  59 ataggaatgaaattggtacgattcannnnnnnagaagcaatttattaggttaaataattgcaaacctaataaagcaa 135  Q
    ||||||||||||||||| |||| ||       ||| | ||||| |||||||||||||||| ||||||||||||||||    
T  23960556 ataggaatgaaattggtgcgatgcatttttttagatgaaatttgttaggttaaataattgtaaacctaataaagcaa 23960632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 97 - 136
Target Start/End: Original strand, 23960812 - 23960851
Alignment:
Q  97 aatttattaggttaaataattgcaaacctaataaagcaaa 136  Q
    ||||| ||||||||||||||| ||||||||||||||||||    
T  23960812 aatttgttaggttaaataattacaaacctaataaagcaaa 23960851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 97 - 136
Target Start/End: Complemental strand, 34947570 - 34947531
Alignment:
Q  97 aatttattaggttaaataattgcaaacctaataaagcaaa 136  Q
    ||||| ||||||||||||||| ||||||||||||||||||    
T  34947570 aatttgttaggttaaataatttcaaacctaataaagcaaa 34947531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 97 - 136
Target Start/End: Complemental strand, 35617776 - 35617737
Alignment:
Q  97 aatttattaggttaaataattgcaaacctaataaagcaaa 136  Q
    ||||| ||||||||||||||||||||||||||||| ||||    
T  35617776 aatttgttaggttaaataattgcaaacctaataaaacaaa 35617737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 97 - 136
Target Start/End: Original strand, 39922100 - 39922139
Alignment:
Q  97 aatttattaggttaaataattgcaaacctaataaagcaaa 136  Q
    ||||| ||||||||||||||||||||||||||||| ||||    
T  39922100 aatttgttaggttaaataattgcaaacctaataaaacaaa 39922139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 97 - 127
Target Start/End: Complemental strand, 3990239 - 3990209
Alignment:
Q  97 aatttattaggttaaataattgcaaacctaa 127  Q
    |||||||||||||||||||||||||||||||    
T  3990239 aatttattaggttaaataattgcaaacctaa 3990209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 98 - 136
Target Start/End: Original strand, 18308258 - 18308296
Alignment:
Q  98 atttattaggttaaataattgcaaacctaataaagcaaa 136  Q
    |||| ||||||||||||||||| ||||||||||||||||    
T  18308258 atttgttaggttaaataattgcgaacctaataaagcaaa 18308296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 16)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 354 - 425
Target Start/End: Complemental strand, 7113036 - 7112966
Alignment:
Q  354 atagaataaatcacttagattgatattctttcaatttctttgatgataaactccttttcctccttaaattgc 425  Q
    ||||||||||| | ||||| |||||||||||||||||| |||||||||||||| |||||||| | |||||||    
T  7113036 atagaataaatta-ttagactgatattctttcaatttccttgatgataaactctttttcctcttcaaattgc 7112966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 97 - 136
Target Start/End: Original strand, 10129509 - 10129548
Alignment:
Q  97 aatttattaggttaaataattgcaaacctaataaagcaaa 136  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  10129509 aatttattaggttaaataattgcaaacctaataaagcaaa 10129548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 59 - 136
Target Start/End: Original strand, 28612207 - 28612284
Alignment:
Q  59 ataggaatgaaattggtacgattcannnnnnnagaagcaatttattaggttaaataattgcaaacctaataaagcaaa 136  Q
    ||||||||||||||||| |||| ||       ||| | ||||| ||||||||||||||||||||||||||||||||||    
T  28612207 ataggaatgaaattggtgcgatgcatttttttagatggaatttgttaggttaaataattgcaaacctaataaagcaaa 28612284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 97 - 136
Target Start/End: Original strand, 5001711 - 5001750
Alignment:
Q  97 aatttattaggttaaataattgcaaacctaataaagcaaa 136  Q
    ||||| ||||||||||||||||||||||||||||||||||    
T  5001711 aatttgttaggttaaataattgcaaacctaataaagcaaa 5001750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 97 - 136
Target Start/End: Complemental strand, 29549885 - 29549846
Alignment:
Q  97 aatttattaggttaaataattgcaaacctaataaagcaaa 136  Q
    |||||||||||||||||||||| |||||||||||||||||    
T  29549885 aatttattaggttaaataattgtaaacctaataaagcaaa 29549846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 97 - 136
Target Start/End: Original strand, 41995765 - 41995804
Alignment:
Q  97 aatttattaggttaaataattgcaaacctaataaagcaaa 136  Q
    ||||| ||||||||||||||||||||||||||||||||||    
T  41995765 aatttgttaggttaaataattgcaaacctaataaagcaaa 41995804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 97 - 135
Target Start/End: Original strand, 28612669 - 28612707
Alignment:
Q  97 aatttattaggttaaataattgcaaacctaataaagcaa 135  Q
    ||||| |||||||||||||||||||||||||||||||||    
T  28612669 aatttgttaggttaaataattgcaaacctaataaagcaa 28612707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 103 - 136
Target Start/End: Original strand, 5001392 - 5001425
Alignment:
Q  103 ttaggttaaataattgcaaacctaataaagcaaa 136  Q
    ||||||||||||||||||||||||||||||||||    
T  5001392 ttaggttaaataattgcaaacctaataaagcaaa 5001425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 103 - 136
Target Start/End: Original strand, 5013062 - 5013095
Alignment:
Q  103 ttaggttaaataattgcaaacctaataaagcaaa 136  Q
    ||||||||||||||||||||||||||||||||||    
T  5013062 ttaggttaaataattgcaaacctaataaagcaaa 5013095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 97 - 136
Target Start/End: Original strand, 12896438 - 12896477
Alignment:
Q  97 aatttattaggttaaataattgcaaacctaataaagcaaa 136  Q
    |||||||||| |||||||||||||||||||||||| ||||    
T  12896438 aatttattagattaaataattgcaaacctaataaaacaaa 12896477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 97 - 136
Target Start/End: Original strand, 44543727 - 44543766
Alignment:
Q  97 aatttattaggttaaataattgcaaacctaataaagcaaa 136  Q
    ||||| |||||||||||||||||||||| |||||||||||    
T  44543727 aattttttaggttaaataattgcaaaccaaataaagcaaa 44543766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 97 - 131
Target Start/End: Complemental strand, 19640401 - 19640367
Alignment:
Q  97 aatttattaggttaaataattgcaaacctaataaa 131  Q
    |||||||||||||||||||||||||||| ||||||    
T  19640401 aatttattaggttaaataattgcaaacccaataaa 19640367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 97 - 131
Target Start/End: Complemental strand, 19838994 - 19838960
Alignment:
Q  97 aatttattaggttaaataattgcaaacctaataaa 131  Q
    |||||||||||||||||||||||||||| ||||||    
T  19838994 aatttattaggttaaataattgcaaacccaataaa 19838960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 98 - 136
Target Start/End: Complemental strand, 41326462 - 41326424
Alignment:
Q  98 atttattaggttaaataattgcaaacctaataaagcaaa 136  Q
    |||||||||||||||||||||||||| ||||||| ||||    
T  41326462 atttattaggttaaataattgcaaacttaataaaacaaa 41326424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 103 - 136
Target Start/End: Original strand, 28611826 - 28611859
Alignment:
Q  103 ttaggttaaataattgcaaacctaataaagcaaa 136  Q
    |||||||||||||||||||||||||| |||||||    
T  28611826 ttaggttaaataattgcaaacctaatcaagcaaa 28611859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 103 - 132
Target Start/End: Original strand, 28612039 - 28612068
Alignment:
Q  103 ttaggttaaataattgcaaacctaataaag 132  Q
    ||||||||||||||||||||||||||||||    
T  28612039 ttaggttaaataattgcaaacctaataaag 28612068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 30)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 97 - 136
Target Start/End: Complemental strand, 27296256 - 27296217
Alignment:
Q  97 aatttattaggttaaataattgcaaacctaataaagcaaa 136  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  27296256 aatttattaggttaaataattgcaaacctaataaagcaaa 27296217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 97 - 136
Target Start/End: Original strand, 44099682 - 44099721
Alignment:
Q  97 aatttattaggttaaataattgcaaacctaataaagcaaa 136  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  44099682 aatttattaggttaaataattgcaaacctaataaagcaaa 44099721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 97 - 136
Target Start/End: Original strand, 51272504 - 51272543
Alignment:
Q  97 aatttattaggttaaataattgcaaacctaataaagcaaa 136  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  51272504 aatttattaggttaaataattgcaaacctaataaagcaaa 51272543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 59 - 136
Target Start/End: Complemental strand, 318687 - 318610
Alignment:
Q  59 ataggaatgaaattggtacgattcannnnnnnagaagcaatttattaggttaaataattgcaaacctaataaagcaaa 136  Q
    ||||||||||||||||| |||| ||       ||| | ||||| ||||||||||||||||||||||||||||||||||    
T  318687 ataggaatgaaattggtgcgatgcatttttttagatggaatttgttaggttaaataattgcaaacctaataaagcaaa 318610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 100 - 136
Target Start/End: Original strand, 28950274 - 28950310
Alignment:
Q  100 ttattaggttaaataattgcaaacctaataaagcaaa 136  Q
    |||||||||||||||||||||||||||||||||||||    
T  28950274 ttattaggttaaataattgcaaacctaataaagcaaa 28950310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 59 - 136
Target Start/End: Complemental strand, 44263221 - 44263144
Alignment:
Q  59 ataggaatgaaattggtacgattcannnnnnnagaagcaatttattaggttaaataattgcaaacctaataaagcaaa 136  Q
    ||||||||||||||||| |||| ||       ||| | ||||| ||||||||||||||||||||||||||||||||||    
T  44263221 ataggaatgaaattggtgcgatgcatttttttagatggaatttgttaggttaaataattgcaaacctaataaagcaaa 44263144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 97 - 136
Target Start/End: Original strand, 1156077 - 1156116
Alignment:
Q  97 aatttattaggttaaataattgcaaacctaataaagcaaa 136  Q
    ||||| ||||||||||||||||||||||||||||||||||    
T  1156077 aatttgttaggttaaataattgcaaacctaataaagcaaa 1156116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 97 - 136
Target Start/End: Original strand, 3227235 - 3227274
Alignment:
Q  97 aatttattaggttaaataattgcaaacctaataaagcaaa 136  Q
    ||||| ||||||||||||||||||||||||||||||||||    
T  3227235 aatttgttaggttaaataattgcaaacctaataaagcaaa 3227274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 97 - 136
Target Start/End: Complemental strand, 5428622 - 5428583
Alignment:
Q  97 aatttattaggttaaataattgcaaacctaataaagcaaa 136  Q
    ||||| ||||||||||||||||||||||||||||||||||    
T  5428622 aatttgttaggttaaataattgcaaacctaataaagcaaa 5428583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 97 - 136
Target Start/End: Original strand, 16165698 - 16165737
Alignment:
Q  97 aatttattaggttaaataattgcaaacctaataaagcaaa 136  Q
    ||||| ||||||||||||||||||||||||||||||||||    
T  16165698 aatttgttaggttaaataattgcaaacctaataaagcaaa 16165737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 97 - 136
Target Start/End: Complemental strand, 21617850 - 21617811
Alignment:
Q  97 aatttattaggttaaataattgcaaacctaataaagcaaa 136  Q
    ||||| ||||||||||||||||||||||||||||||||||    
T  21617850 aatttgttaggttaaataattgcaaacctaataaagcaaa 21617811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 97 - 136
Target Start/End: Original strand, 42492177 - 42492216
Alignment:
Q  97 aatttattaggttaaataattgcaaacctaataaagcaaa 136  Q
    ||||| ||||||||||||||||||||||||||||||||||    
T  42492177 aatttgttaggttaaataattgcaaacctaataaagcaaa 42492216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 97 - 136
Target Start/End: Original strand, 42497303 - 42497342
Alignment:
Q  97 aatttattaggttaaataattgcaaacctaataaagcaaa 136  Q
    ||||| ||||||||||||||||||||||||||||||||||    
T  42497303 aatttgttaggttaaataattgcaaacctaataaagcaaa 42497342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 97 - 136
Target Start/End: Original strand, 45417612 - 45417651
Alignment:
Q  97 aatttattaggttaaataattgcaaacctaataaagcaaa 136  Q
    ||||| ||||||||||||||||||||||||||||||||||    
T  45417612 aatttgttaggttaaataattgcaaacctaataaagcaaa 45417651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 97 - 136
Target Start/End: Complemental strand, 51114184 - 51114145
Alignment:
Q  97 aatttattaggttaaataattgcaaacctaataaagcaaa 136  Q
    ||||| ||||||||||||||||||||||||||||||||||    
T  51114184 aatttgttaggttaaataattgcaaacctaataaagcaaa 51114145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 97 - 135
Target Start/End: Complemental strand, 5429146 - 5429108
Alignment:
Q  97 aatttattaggttaaataattgcaaacctaataaagcaa 135  Q
    ||||| |||||||||||||||||||||||||||||||||    
T  5429146 aatttgttaggttaaataattgcaaacctaataaagcaa 5429108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 98 - 136
Target Start/End: Complemental strand, 24595321 - 24595283
Alignment:
Q  98 atttattaggttaaataattgcaaacctaataaagcaaa 136  Q
    |||| ||||||||||||||||||||||||||||||||||    
T  24595321 attttttaggttaaataattgcaaacctaataaagcaaa 24595283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 59 - 136
Target Start/End: Complemental strand, 1647675 - 1647598
Alignment:
Q  59 ataggaatgaaattggtacgattcannnnnnnagaagcaatttattaggttaaataattgcaaacctaataaagcaaa 136  Q
    |||| |||||||||||| |||||||       ||| | ||||| ||||||||||||||| ||||||||||||||||||    
T  1647675 atagaaatgaaattggtgcgattcatttttttagatgaaatttgttaggttaaataattccaaacctaataaagcaaa 1647598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 97 - 132
Target Start/End: Original strand, 6537667 - 6537702
Alignment:
Q  97 aatttattaggttaaataattgcaaacctaataaag 132  Q
    ||||| ||||||||||||||||||||||||||||||    
T  6537667 aatttgttaggttaaataattgcaaacctaataaag 6537702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 97 - 136
Target Start/End: Complemental strand, 12115399 - 12115360
Alignment:
Q  97 aatttattaggttaaataattgcaaacctaataaagcaaa 136  Q
    ||||| ||||||||||||||| ||||||||||||||||||    
T  12115399 aatttgttaggttaaataattccaaacctaataaagcaaa 12115360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 97 - 132
Target Start/End: Complemental strand, 27296431 - 27296396
Alignment:
Q  97 aatttattaggttaaataattgcaaacctaataaag 132  Q
    ||||| ||||||||||||||||||||||||||||||    
T  27296431 aatttgttaggttaaataattgcaaacctaataaag 27296396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 97 - 136
Target Start/End: Original strand, 28949904 - 28949943
Alignment:
Q  97 aatttattaggttaaataattgcaaacctaataaagcaaa 136  Q
    ||||| ||||||||||||||| ||||||||||||||||||    
T  28949904 aatttgttaggttaaataattacaaacctaataaagcaaa 28949943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 97 - 136
Target Start/End: Complemental strand, 38684109 - 38684070
Alignment:
Q  97 aatttattaggttaaataattgcaaacctaataaagcaaa 136  Q
    ||||| |||||||||||||| |||||||||||||||||||    
T  38684109 aatttgttaggttaaataatcgcaaacctaataaagcaaa 38684070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 97 - 136
Target Start/End: Original strand, 42497123 - 42497162
Alignment:
Q  97 aatttattaggttaaataattgcaaacctaataaagcaaa 136  Q
    ||||||||| |||||||||||| |||||||||||||||||    
T  42497123 aatttattatgttaaataattgtaaacctaataaagcaaa 42497162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 97 - 136
Target Start/End: Complemental strand, 44262758 - 44262719
Alignment:
Q  97 aatttattaggttaaataattgcaaacctaataaagcaaa 136  Q
    ||||| ||||||||||||||||||||| ||||||||||||    
T  44262758 aatttgttaggttaaataattgcaaacgtaataaagcaaa 44262719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 97 - 136
Target Start/End: Complemental strand, 44263404 - 44263365
Alignment:
Q  97 aatttattaggttaaataattgcaaacctaataaagcaaa 136  Q
    ||||| |||||||||||||||||||||||||||| |||||    
T  44263404 aatttgttaggttaaataattgcaaacctaataaggcaaa 44263365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 97 - 136
Target Start/End: Complemental strand, 51113817 - 51113778
Alignment:
Q  97 aatttattaggttaaataattgcaaacctaataaagcaaa 136  Q
    ||||| |||||||||||||||||||| |||||||||||||    
T  51113817 aatttgttaggttaaataattgcaaatctaataaagcaaa 51113778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 97 - 132
Target Start/End: Complemental strand, 51114000 - 51113965
Alignment:
Q  97 aatttattaggttaaataattgcaaacctaataaag 132  Q
    ||||| ||||||||||||||||||||||||||||||    
T  51114000 aatttgttaggttaaataattgcaaacctaataaag 51113965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 97 - 134
Target Start/End: Complemental strand, 5429027 - 5428990
Alignment:
Q  97 aatttattaggttaaataattgcaaacctaataaagca 134  Q
    ||||| |||| |||||||||||||||||||||||||||    
T  5429027 aatttgttagcttaaataattgcaaacctaataaagca 5428990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 103 - 132
Target Start/End: Complemental strand, 33375718 - 33375689
Alignment:
Q  103 ttaggttaaataattgcaaacctaataaag 132  Q
    ||||||||||||||||||||||||||||||    
T  33375718 ttaggttaaataattgcaaacctaataaag 33375689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 38; Significance: 0.000000000003; HSPs: 22)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 91 - 136
Target Start/End: Original strand, 38887584 - 38887629
Alignment:
Q  91 agaagcaatttattaggttaaataattgcaaacctaataaagcaaa 136  Q
    ||||| ||||| ||||||||||||||||||||||||||||||||||    
T  38887584 agaaggaatttgttaggttaaataattgcaaacctaataaagcaaa 38887629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 59 - 136
Target Start/End: Complemental strand, 46451602 - 46451525
Alignment:
Q  59 ataggaatgaaattggtacgattcannnnnnnagaagcaatttattaggttaaataattgcaaacctaataaagcaaa 136  Q
    ||||||||||||||||| |||| ||       ||| | ||||| ||||||||||||||||||||||||||||||||||    
T  46451602 ataggaatgaaattggtgcgatgcattattttagatggaatttgttaggttaaataattgcaaacctaataaagcaaa 46451525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 59 - 136
Target Start/End: Original strand, 47503200 - 47503277
Alignment:
Q  59 ataggaatgaaattggtacgattcannnnnnnagaagcaatttattaggttaaataattgcaaacctaataaagcaaa 136  Q
    ||||||||||||||||| |||| ||       ||| | ||||| ||||||||||||||||||||||||||||||||||    
T  47503200 ataggaatgaaattggtgcgatgcatttttttagatgaaatttgttaggttaaataattgcaaacctaataaagcaaa 47503277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 97 - 136
Target Start/End: Original strand, 837215 - 837254
Alignment:
Q  97 aatttattaggttaaataattgcaaacctaataaagcaaa 136  Q
    ||||| ||||||||||||||||||||||||||||||||||    
T  837215 aatttgttaggttaaataattgcaaacctaataaagcaaa 837254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 97 - 136
Target Start/End: Complemental strand, 11454032 - 11453993
Alignment:
Q  97 aatttattaggttaaataattgcaaacctaataaagcaaa 136  Q
    ||||| ||||||||||||||||||||||||||||||||||    
T  11454032 aatttgttaggttaaataattgcaaacctaataaagcaaa 11453993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 97 - 136
Target Start/End: Complemental strand, 35560196 - 35560157
Alignment:
Q  97 aatttattaggttaaataattgcaaacctaataaagcaaa 136  Q
    ||||| ||||||||||||||||||||||||||||||||||    
T  35560196 aatttgttaggttaaataattgcaaacctaataaagcaaa 35560157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 97 - 136
Target Start/End: Original strand, 36643139 - 36643178
Alignment:
Q  97 aatttattaggttaaataattgcaaacctaataaagcaaa 136  Q
    ||||| ||||||||||||||||||||||||||||||||||    
T  36643139 aatttgttaggttaaataattgcaaacctaataaagcaaa 36643178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 97 - 136
Target Start/End: Complemental strand, 37760591 - 37760552
Alignment:
Q  97 aatttattaggttaaataattgcaaacctaataaagcaaa 136  Q
    ||||| ||||||||||||||||||||||||||||||||||    
T  37760591 aatttgttaggttaaataattgcaaacctaataaagcaaa 37760552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 97 - 136
Target Start/End: Original strand, 38887377 - 38887416
Alignment:
Q  97 aatttattaggttaaataattgcaaacctaataaagcaaa 136  Q
    ||||| ||||||||||||||||||||||||||||||||||    
T  38887377 aatttgttaggttaaataattgcaaacctaataaagcaaa 38887416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 98 - 136
Target Start/End: Complemental strand, 18094834 - 18094796
Alignment:
Q  98 atttattaggttaaataattgcaaacctaataaagcaaa 136  Q
    |||| ||||||||||||||||||||||||||||||||||    
T  18094834 atttgttaggttaaataattgcaaacctaataaagcaaa 18094796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 103 - 136
Target Start/End: Complemental strand, 54274820 - 54274787
Alignment:
Q  103 ttaggttaaataattgcaaacctaataaagcaaa 136  Q
    ||||||||||||||||||||||||||||||||||    
T  54274820 ttaggttaaataattgcaaacctaataaagcaaa 54274787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 63 - 136
Target Start/End: Complemental strand, 18095084 - 18095011
Alignment:
Q  63 gaatgaaattggtacgattcannnnnnnagaagcaatttattaggttaaataattgcaaacctaataaagcaaa 136  Q
    ||||||||||||| |||||||       ||| | ||||| ||||||||||| ||||||||||||||||||||||    
T  18095084 gaatgaaattggtgcgattcattttttaagatggaatttgttaggttaaatcattgcaaacctaataaagcaaa 18095011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 59 - 136
Target Start/End: Original strand, 47503027 - 47503104
Alignment:
Q  59 ataggaatgaaattggtacgattcannnnnnnagaagcaatttattaggttaaataattgcaaacctaataaagcaaa 136  Q
    ||||||||||||||||| |||| ||       ||| | ||||| |||||||||||||||||||||||||||| |||||    
T  47503027 ataggaatgaaattggtgcgatgcatttttttagatgaaatttgttaggttaaataattgcaaacctaataatgcaaa 47503104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 97 - 136
Target Start/End: Complemental strand, 11454657 - 11454618
Alignment:
Q  97 aatttattaggttaaataattgcaaacctaataaagcaaa 136  Q
    ||||| ||||||||||| ||||||||||||||||||||||    
T  11454657 aatttgttaggttaaatgattgcaaacctaataaagcaaa 11454618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 97 - 136
Target Start/End: Original strand, 38887807 - 38887846
Alignment:
Q  97 aatttattaggttaaataattgcaaacctaataaagcaaa 136  Q
    ||||| ||| ||||||||||||||||||||||||||||||    
T  38887807 aatttgttacgttaaataattgcaaacctaataaagcaaa 38887846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 97 - 136
Target Start/End: Complemental strand, 40050944 - 40050905
Alignment:
Q  97 aatttattaggttaaataattgcaaacctaataaagcaaa 136  Q
    ||||| ||||||||||| ||||||||||||||||||||||    
T  40050944 aatttgttaggttaaattattgcaaacctaataaagcaaa 40050905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 97 - 136
Target Start/End: Complemental strand, 43017365 - 43017326
Alignment:
Q  97 aatttattaggttaaataattgcaaacctaataaagcaaa 136  Q
    ||||| ||||||||||||||||||||| ||||||||||||    
T  43017365 aatttgttaggttaaataattgcaaacttaataaagcaaa 43017326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 97 - 136
Target Start/End: Complemental strand, 46451377 - 46451338
Alignment:
Q  97 aatttattaggttaaataattgcaaacctaataaagcaaa 136  Q
    ||||| |||||||||||||||||||| |||||||||||||    
T  46451377 aatttgttaggttaaataattgcaaatctaataaagcaaa 46451338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 97 - 136
Target Start/End: Original strand, 53047599 - 53047638
Alignment:
Q  97 aatttattaggttaaataattgcaaacctaataaagcaaa 136  Q
    ||||| ||||||||||||||||||||||||| ||||||||    
T  53047599 aatttgttaggttaaataattgcaaacctaacaaagcaaa 53047638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 103 - 136
Target Start/End: Complemental strand, 11454471 - 11454438
Alignment:
Q  103 ttaggttaaataattgcaaacctaataaagcaaa 136  Q
    ||||||||||||||||||| ||||||||||||||    
T  11454471 ttaggttaaataattgcaagcctaataaagcaaa 11454438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 103 - 136
Target Start/End: Complemental strand, 24365822 - 24365789
Alignment:
Q  103 ttaggttaaataattgcaaacctaataaagcaaa 136  Q
    ||||||||||||||||||||||||||||| ||||    
T  24365822 ttaggttaaataattgcaaacctaataaatcaaa 24365789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 103 - 136
Target Start/End: Complemental strand, 47520014 - 47519981
Alignment:
Q  103 ttaggttaaataattgcaaacctaataaagcaaa 136  Q
    ||||||||||||||||||| ||||||||||||||    
T  47520014 ttaggttaaataattgcaaccctaataaagcaaa 47519981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 37; Significance: 0.00000000001; HSPs: 39)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 59 - 136
Target Start/End: Complemental strand, 16671737 - 16671660
Alignment:
Q  59 ataggaatgaaattggtacgattcannnnnnnagaagcaatttattaggttaaataattgcaaacctaataaagcaaa 136  Q
    ||||||||||||||||| |||| ||       ||| | ||||| ||||||||||||||||||||||||||||||||||    
T  16671737 ataggaatgaaattggtgcgatgcatttttttagatggaatttgttaggttaaataattgcaaacctaataaagcaaa 16671660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 59 - 136
Target Start/End: Complemental strand, 17646105 - 17646028
Alignment:
Q  59 ataggaatgaaattggtacgattcannnnnnnagaagcaatttattaggttaaataattgcaaacctaataaagcaaa 136  Q
    ||||||||||||||||| |||| ||       ||| | ||||| ||||||||||||||||||||||||||||||||||    
T  17646105 ataggaatgaaattggtgcgatgcatttttttagatggaatttgttaggttaaataattgcaaacctaataaagcaaa 17646028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 59 - 136
Target Start/End: Complemental strand, 18486766 - 18486689
Alignment:
Q  59 ataggaatgaaattggtacgattcannnnnnnagaagcaatttattaggttaaataattgcaaacctaataaagcaaa 136  Q
    |||||||||||||||||| ||| ||       ||| | ||||| ||||||||||||||||||||||||||||||||||    
T  18486766 ataggaatgaaattggtatgatgcatttttttagatgaaatttgttaggttaaataattgcaaacctaataaagcaaa 18486689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 59 - 136
Target Start/End: Original strand, 23591387 - 23591464
Alignment:
Q  59 ataggaatgaaattggtacgattcannnnnnnagaagcaatttattaggttaaataattgcaaacctaataaagcaaa 136  Q
    ||||||||||||||||| |||| ||       ||| | ||||| ||||||||||||||||||||||||||||||||||    
T  23591387 ataggaatgaaattggtgcgatgcatttttttagatggaatttgttaggttaaataattgcaaacctaataaagcaaa 23591464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 59 - 136
Target Start/End: Complemental strand, 35124857 - 35124780
Alignment:
Q  59 ataggaatgaaattggtacgattcannnnnnnagaagcaatttattaggttaaataattgcaaacctaataaagcaaa 136  Q
    ||||||||||||||||| |||| ||       ||| | ||||| ||||||||||||||||||||||||||||||||||    
T  35124857 ataggaatgaaattggtgcgatgcatttttttagacggaatttgttaggttaaataattgcaaacctaataaagcaaa 35124780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 97 - 136
Target Start/End: Original strand, 1566519 - 1566558
Alignment:
Q  97 aatttattaggttaaataattgcaaacctaataaagcaaa 136  Q
    ||||| ||||||||||||||||||||||||||||||||||    
T  1566519 aatttgttaggttaaataattgcaaacctaataaagcaaa 1566558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 97 - 136
Target Start/End: Original strand, 4680907 - 4680946
Alignment:
Q  97 aatttattaggttaaataattgcaaacctaataaagcaaa 136  Q
    ||||| ||||||||||||||||||||||||||||||||||    
T  4680907 aatttgttaggttaaataattgcaaacctaataaagcaaa 4680946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 97 - 136
Target Start/End: Original strand, 4681156 - 4681195
Alignment:
Q  97 aatttattaggttaaataattgcaaacctaataaagcaaa 136  Q
    ||||||||||||||||||||||||||| ||||||||||||    
T  4681156 aatttattaggttaaataattgcaaacataataaagcaaa 4681195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 97 - 136
Target Start/End: Original strand, 9141972 - 9142011
Alignment:
Q  97 aatttattaggttaaataattgcaaacctaataaagcaaa 136  Q
    ||||| ||||||||||||||||||||||||||||||||||    
T  9141972 aatttgttaggttaaataattgcaaacctaataaagcaaa 9142011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 97 - 136
Target Start/End: Original strand, 11646408 - 11646447
Alignment:
Q  97 aatttattaggttaaataattgcaaacctaataaagcaaa 136  Q
    ||||| ||||||||||||||||||||||||||||||||||    
T  11646408 aatttgttaggttaaataattgcaaacctaataaagcaaa 11646447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 97 - 136
Target Start/End: Original strand, 11650019 - 11650058
Alignment:
Q  97 aatttattaggttaaataattgcaaacctaataaagcaaa 136  Q
    ||||| ||||||||||||||||||||||||||||||||||    
T  11650019 aatttgttaggttaaataattgcaaacctaataaagcaaa 11650058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 97 - 136
Target Start/End: Complemental strand, 18487245 - 18487206
Alignment:
Q  97 aatttattaggttaaataattgcaaacctaataaagcaaa 136  Q
    ||||| ||||||||||||||||||||||||||||||||||    
T  18487245 aatttgttaggttaaataattgcaaacctaataaagcaaa 18487206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 97 - 136
Target Start/End: Original strand, 23591642 - 23591681
Alignment:
Q  97 aatttattaggttaaataattgcaaacctaataaagcaaa 136  Q
    ||||| ||||||||||||||||||||||||||||||||||    
T  23591642 aatttgttaggttaaataattgcaaacctaataaagcaaa 23591681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 97 - 136
Target Start/End: Original strand, 27716320 - 27716359
Alignment:
Q  97 aatttattaggttaaataattgcaaacctaataaagcaaa 136  Q
    ||||| ||||||||||||||||||||||||||||||||||    
T  27716320 aatttgttaggttaaataattgcaaacctaataaagcaaa 27716359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 97 - 136
Target Start/End: Original strand, 40686903 - 40686942
Alignment:
Q  97 aatttattaggttaaataattgcaaacctaataaagcaaa 136  Q
    ||||| ||||||||||||||||||||||||||||||||||    
T  40686903 aatttgttaggttaaataattgcaaacctaataaagcaaa 40686942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 97 - 136
Target Start/End: Original strand, 45419647 - 45419686
Alignment:
Q  97 aatttattaggttaaataattgcaaacctaataaagcaaa 136  Q
    ||||| ||||||||||||||||||||||||||||||||||    
T  45419647 aatttgttaggttaaataattgcaaacctaataaagcaaa 45419686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 97 - 136
Target Start/End: Original strand, 46264294 - 46264333
Alignment:
Q  97 aatttattaggttaaataattgcaaacctaataaagcaaa 136  Q
    ||||| ||||||||||||||||||||||||||||||||||    
T  46264294 aatttgttaggttaaataattgcaaacctaataaagcaaa 46264333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 97 - 136
Target Start/End: Original strand, 48640812 - 48640851
Alignment:
Q  97 aatttattaggttaaataattgcaaacctaataaagcaaa 136  Q
    ||||| ||||||||||||||||||||||||||||||||||    
T  48640812 aatttgttaggttaaataattgcaaacctaataaagcaaa 48640851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 103 - 136
Target Start/End: Original strand, 2526970 - 2527003
Alignment:
Q  103 ttaggttaaataattgcaaacctaataaagcaaa 136  Q
    ||||||||||||||||||||||||||||||||||    
T  2526970 ttaggttaaataattgcaaacctaataaagcaaa 2527003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 103 - 136
Target Start/End: Original strand, 27716548 - 27716581
Alignment:
Q  103 ttaggttaaataattgcaaacctaataaagcaaa 136  Q
    ||||||||||||||||||||||||||||||||||    
T  27716548 ttaggttaaataattgcaaacctaataaagcaaa 27716581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 91 - 136
Target Start/End: Original strand, 40450106 - 40450151
Alignment:
Q  91 agaagcaatttattaggttaaataattgcaaacctaataaagcaaa 136  Q
    ||||| ||||| |||||||||||||||||||| |||||||||||||    
T  40450106 agaagaaatttgttaggttaaataattgcaaatctaataaagcaaa 40450151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 59 - 136
Target Start/End: Original strand, 12140834 - 12140911
Alignment:
Q  59 ataggaatgaaattggtacgattcannnnnnnagaagcaatttattaggttaaataattgcaaacctaataaagcaaa 136  Q
    ||||||||||||||||| |||| ||       ||| | ||||| |||||||||||||||||||||||||||| |||||    
T  12140834 ataggaatgaaattggtgcgatgcattcttttagatgaaatttgttaggttaaataattgcaaacctaataacgcaaa 12140911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 97 - 136
Target Start/End: Original strand, 2853228 - 2853267
Alignment:
Q  97 aatttattaggttaaataattgcaaacctaataaagcaaa 136  Q
    ||||| ||||||||||||||||||||||||||||| ||||    
T  2853228 aatttgttaggttaaataattgcaaacctaataaaacaaa 2853267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 97 - 136
Target Start/End: Original strand, 4681609 - 4681648
Alignment:
Q  97 aatttattaggttaaataattgcaaacctaataaagcaaa 136  Q
    ||||| ||| ||||||||||||||||||||||||||||||    
T  4681609 aatttgttaagttaaataattgcaaacctaataaagcaaa 4681648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 97 - 136
Target Start/End: Original strand, 11645942 - 11645981
Alignment:
Q  97 aatttattaggttaaataattgcaaacctaataaagcaaa 136  Q
    ||||| ||||||||||||||| ||||||||||||||||||    
T  11645942 aatttgttaggttaaataattacaaacctaataaagcaaa 11645981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 97 - 136
Target Start/End: Original strand, 11646220 - 11646259
Alignment:
Q  97 aatttattaggttaaataattgcaaacctaataaagcaaa 136  Q
    ||||| ||||||||||||||||||||||||| ||||||||    
T  11646220 aatttgttaggttaaataattgcaaacctaacaaagcaaa 11646259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 97 - 136
Target Start/End: Original strand, 16492556 - 16492595
Alignment:
Q  97 aatttattaggttaaataattgcaaacctaataaagcaaa 136  Q
    ||||| ||||||||||||||||||||| ||||||||||||    
T  16492556 aatttgttaggttaaataattgcaaacataataaagcaaa 16492595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 97 - 136
Target Start/End: Complemental strand, 16671340 - 16671301
Alignment:
Q  97 aatttattaggttaaataattgcaaacctaataaagcaaa 136  Q
    ||||| ||||||||||||||||||||||||||| ||||||    
T  16671340 aatttgttaggttaaataattgcaaacctaatagagcaaa 16671301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 97 - 136
Target Start/End: Complemental strand, 17645708 - 17645669
Alignment:
Q  97 aatttattaggttaaataattgcaaacctaataaagcaaa 136  Q
    ||||| ||||||||||||||||||||||||||| ||||||    
T  17645708 aatttgttaggttaaataattgcaaacctaatagagcaaa 17645669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 97 - 136
Target Start/End: Complemental strand, 19222200 - 19222161
Alignment:
Q  97 aatttattaggttaaataattgcaaacctaataaagcaaa 136  Q
    ||||| |||||||||||||||| |||||||||||||||||    
T  19222200 aatttgttaggttaaataattgtaaacctaataaagcaaa 19222161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 97 - 136
Target Start/End: Complemental strand, 30991554 - 30991515
Alignment:
Q  97 aatttattaggttaaataattgcaaacctaataaagcaaa 136  Q
    ||||| ||||||||||||||||||||| ||||||||||||    
T  30991554 aatttgttaggttaaataattgcaaacataataaagcaaa 30991515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 97 - 136
Target Start/End: Complemental strand, 34837282 - 34837243
Alignment:
Q  97 aatttattaggttaaataattgcaaacctaataaagcaaa 136  Q
    ||||| |||||||||||||||| |||||||||||||||||    
T  34837282 aatttgttaggttaaataattgtaaacctaataaagcaaa 34837243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 97 - 136
Target Start/End: Complemental strand, 43059285 - 43059246
Alignment:
Q  97 aatttattaggttaaataattgcaaacctaataaagcaaa 136  Q
    ||||| |||| |||||||||||||||||||||||||||||    
T  43059285 aatttgttagattaaataattgcaaacctaataaagcaaa 43059246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 97 - 136
Target Start/End: Original strand, 45419853 - 45419892
Alignment:
Q  97 aatttattaggttaaataattgcaaacctaataaagcaaa 136  Q
    ||||| ||||||||||||||| ||||||||||||||||||    
T  45419853 aatttgttaggttaaataattacaaacctaataaagcaaa 45419892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 97 - 136
Target Start/End: Original strand, 48641027 - 48641066
Alignment:
Q  97 aatttattaggttaaataattgcaaacctaataaagcaaa 136  Q
    ||||| || |||||||||||||||||||||||||||||||    
T  48641027 aatttttttggttaaataattgcaaacctaataaagcaaa 48641066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 97 - 136
Target Start/End: Original strand, 48641453 - 48641492
Alignment:
Q  97 aatttattaggttaaataattgcaaacctaataaagcaaa 136  Q
    ||||| ||||||||||||||||||||| ||||||||||||    
T  48641453 aatttgttaggttaaataattgcaaacttaataaagcaaa 48641492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 103 - 136
Target Start/End: Original strand, 9142150 - 9142183
Alignment:
Q  103 ttaggttaaataattgcaaacctaataaagcaaa 136  Q
    |||||||||||||||||||||| |||||||||||    
T  9142150 ttaggttaaataattgcaaaccaaataaagcaaa 9142183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 103 - 136
Target Start/End: Complemental strand, 21224226 - 21224193
Alignment:
Q  103 ttaggttaaataattgcaaacctaataaagcaaa 136  Q
    |||||||||||||||| |||||||||||||||||    
T  21224226 ttaggttaaataattgtaaacctaataaagcaaa 21224193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 108 - 136
Target Start/End: Original strand, 2354687 - 2354715
Alignment:
Q  108 ttaaataattgcaaacctaataaagcaaa 136  Q
    |||||||||||||||||||||||||||||    
T  2354687 ttaaataattgcaaacctaataaagcaaa 2354715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 37; Significance: 0.00000000001; HSPs: 14)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 59 - 136
Target Start/End: Complemental strand, 9829051 - 9828974
Alignment:
Q  59 ataggaatgaaattggtacgattcannnnnnnagaagcaatttattaggttaaataattgcaaacctaataaagcaaa 136  Q
    ||||||||||||||||| |||| ||       ||| | ||||| ||||||||||||||||||||||||||||||||||    
T  9829051 ataggaatgaaattggtgcgatgcatttttttagatggaatttgttaggttaaataattgcaaacctaataaagcaaa 9828974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 97 - 136
Target Start/End: Complemental strand, 23622312 - 23622273
Alignment:
Q  97 aatttattaggttaaataattgcaaacctaataaagcaaa 136  Q
    ||||| ||||||||||||||||||||||||||||||||||    
T  23622312 aatttgttaggttaaataattgcaaacctaataaagcaaa 23622273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 97 - 136
Target Start/End: Complemental strand, 27315380 - 27315341
Alignment:
Q  97 aatttattaggttaaataattgcaaacctaataaagcaaa 136  Q
    ||||| ||||||||||||||||||||||||||||||||||    
T  27315380 aatttgttaggttaaataattgcaaacctaataaagcaaa 27315341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 97 - 136
Target Start/End: Complemental strand, 27579692 - 27579653
Alignment:
Q  97 aatttattaggttaaataattgcaaacctaataaagcaaa 136  Q
    ||||| ||||||||||||||||||||||||||||||||||    
T  27579692 aatttgttaggttaaataattgcaaacctaataaagcaaa 27579653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 103 - 137
Target Start/End: Original strand, 4811080 - 4811114
Alignment:
Q  103 ttaggttaaataattgcaaacctaataaagcaaac 137  Q
    |||||||||||||||||||||||||||||||||||    
T  4811080 ttaggttaaataattgcaaacctaataaagcaaac 4811114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 103 - 136
Target Start/End: Complemental strand, 25068276 - 25068243
Alignment:
Q  103 ttaggttaaataattgcaaacctaataaagcaaa 136  Q
    ||||||||||||||||||||||||||||||||||    
T  25068276 ttaggttaaataattgcaaacctaataaagcaaa 25068243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 97 - 136
Target Start/End: Complemental strand, 808924 - 808885
Alignment:
Q  97 aatttattaggttaaataattgcaaacctaataaagcaaa 136  Q
    ||||| || |||||||||||||||||||||||||||||||    
T  808924 aatttgtttggttaaataattgcaaacctaataaagcaaa 808885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 97 - 136
Target Start/End: Complemental strand, 17201691 - 17201652
Alignment:
Q  97 aatttattaggttaaataattgcaaacctaataaagcaaa 136  Q
    ||||| ||||||||||||||||||||||||||||| ||||    
T  17201691 aatttgttaggttaaataattgcaaacctaataaaacaaa 17201652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 97 - 136
Target Start/End: Complemental strand, 17202725 - 17202686
Alignment:
Q  97 aatttattaggttaaataattgcaaacctaataaagcaaa 136  Q
    ||||| |||| |||||||||||||||||||||||||||||    
T  17202725 aatttgttagattaaataattgcaaacctaataaagcaaa 17202686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 97 - 136
Target Start/End: Complemental strand, 17202944 - 17202905
Alignment:
Q  97 aatttattaggttaaataattgcaaacctaataaagcaaa 136  Q
    ||||| |||||||||||||||||||| |||||||||||||    
T  17202944 aatttgttaggttaaataattgcaaatctaataaagcaaa 17202905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 97 - 136
Target Start/End: Original strand, 17906812 - 17906851
Alignment:
Q  97 aatttattaggttaaataattgcaaacctaataaagcaaa 136  Q
    ||||| ||||||||||||||| ||||||||||||||||||    
T  17906812 aatttgttaggttaaataattacaaacctaataaagcaaa 17906851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 97 - 136
Target Start/End: Original strand, 26832528 - 26832567
Alignment:
Q  97 aatttattaggttaaataattgcaaacctaataaagcaaa 136  Q
    ||||| ||| ||||||||||||||||||||||||||||||    
T  26832528 aatttgttaagttaaataattgcaaacctaataaagcaaa 26832567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 97 - 133
Target Start/End: Complemental strand, 15130993 - 15130957
Alignment:
Q  97 aatttattaggttaaataattgcaaacctaataaagc 133  Q
    ||||| |||||||||||||||||||| ||||||||||    
T  15130993 aatttgttaggttaaataattgcaaatctaataaagc 15130957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 97 - 136
Target Start/End: Original strand, 32208419 - 32208459
Alignment:
Q  97 aatttattaggttaaa-taattgcaaacctaataaagcaaa 136  Q
    ||||| |||||||||| ||||||||||||||||||||||||    
T  32208419 aatttgttaggttaaaataattgcaaacctaataaagcaaa 32208459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 37; Significance: 0.00000000001; HSPs: 25)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 59 - 136
Target Start/End: Complemental strand, 11314112 - 11314035
Alignment:
Q  59 ataggaatgaaattggtacgattcannnnnnnagaagcaatttattaggttaaataattgcaaacctaataaagcaaa 136  Q
    ||||||||||||||||| |||| ||       ||| | ||||| ||||||||||||||||||||||||||||||||||    
T  11314112 ataggaatgaaattggtgcgatgcatttttttagatggaattttttaggttaaataattgcaaacctaataaagcaaa 11314035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 59 - 136
Target Start/End: Original strand, 43394927 - 43395004
Alignment:
Q  59 ataggaatgaaattggtacgattcannnnnnnagaagcaatttattaggttaaataattgcaaacctaataaagcaaa 136  Q
    ||||||||||||||||| |||| ||       ||| | ||||| ||||||||||||||||||||||||||||||||||    
T  43394927 ataggaatgaaattggtgcgatgcatttttttagatgaaatttgttaggttaaataattgcaaacctaataaagcaaa 43395004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 97 - 136
Target Start/End: Complemental strand, 16305440 - 16305401
Alignment:
Q  97 aatttattaggttaaataattgcaaacctaataaagcaaa 136  Q
    |||||||||| |||||||||||||||||||||||||||||    
T  16305440 aatttattagattaaataattgcaaacctaataaagcaaa 16305401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 97 - 136
Target Start/End: Complemental strand, 16526292 - 16526253
Alignment:
Q  97 aatttattaggttaaataattgcaaacctaataaagcaaa 136  Q
    ||||| ||||||||||||||||||||||||||||||||||    
T  16526292 aatttgttaggttaaataattgcaaacctaataaagcaaa 16526253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 97 - 136
Target Start/End: Complemental strand, 16528694 - 16528655
Alignment:
Q  97 aatttattaggttaaataattgcaaacctaataaagcaaa 136  Q
    ||||| ||||||||||||||||||||||||||||||||||    
T  16528694 aatttgttaggttaaataattgcaaacctaataaagcaaa 16528655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 97 - 136
Target Start/End: Complemental strand, 35159797 - 35159758
Alignment:
Q  97 aatttattaggttaaataattgcaaacctaataaagcaaa 136  Q
    ||||| ||||||||||||||||||||||||||||||||||    
T  35159797 aatttgttaggttaaataattgcaaacctaataaagcaaa 35159758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 97 - 136
Target Start/End: Original strand, 41092902 - 41092941
Alignment:
Q  97 aatttattaggttaaataattgcaaacctaataaagcaaa 136  Q
    ||||| ||||||||||||||||||||||||||||||||||    
T  41092902 aatttgttaggttaaataattgcaaacctaataaagcaaa 41092941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 97 - 136
Target Start/End: Original strand, 41093081 - 41093120
Alignment:
Q  97 aatttattaggttaaataattgcaaacctaataaagcaaa 136  Q
    ||||| ||||||||||||||||||||||||||||||||||    
T  41093081 aatttgttaggttaaataattgcaaacctaataaagcaaa 41093120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 103 - 136
Target Start/End: Complemental strand, 35159505 - 35159472
Alignment:
Q  103 ttaggttaaataattgcaaacctaataaagcaaa 136  Q
    ||||||||||||||||||||||||||||||||||    
T  35159505 ttaggttaaataattgcaaacctaataaagcaaa 35159472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 97 - 136
Target Start/End: Original strand, 7673230 - 7673269
Alignment:
Q  97 aatttattaggttaaataattgcaaacctaataaagcaaa 136  Q
    ||||| ||||||||||||||||||||||||||||| ||||    
T  7673230 aatttgttaggttaaataattgcaaacctaataaaacaaa 7673269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 97 - 136
Target Start/End: Original strand, 9488081 - 9488120
Alignment:
Q  97 aatttattaggttaaataattgcaaacctaataaagcaaa 136  Q
    ||||| |||||||||||||||||||| |||||||||||||    
T  9488081 aatttgttaggttaaataattgcaaatctaataaagcaaa 9488120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 97 - 132
Target Start/End: Complemental strand, 11313734 - 11313699
Alignment:
Q  97 aatttattaggttaaataattgcaaacctaataaag 132  Q
    ||||| ||||||||||||||||||||||||||||||    
T  11313734 aatttgttaggttaaataattgcaaacctaataaag 11313699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 97 - 132
Target Start/End: Complemental strand, 11313896 - 11313861
Alignment:
Q  97 aatttattaggttaaataattgcaaacctaataaag 132  Q
    ||||| ||||||||||||||||||||||||||||||    
T  11313896 aatttgttaggttaaataattgcaaacctaataaag 11313861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 97 - 136
Target Start/End: Original strand, 12442164 - 12442203
Alignment:
Q  97 aatttattaggttaaataattgcaaacctaataaagcaaa 136  Q
    ||||| |||||||||||||||||||||||||||| |||||    
T  12442164 aatttgttaggttaaataattgcaaacctaataaggcaaa 12442203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 97 - 136
Target Start/End: Original strand, 14166194 - 14166233
Alignment:
Q  97 aatttattaggttaaataattgcaaacctaataaagcaaa 136  Q
    ||||| ||||||||||||||||||||| ||||||||||||    
T  14166194 aatttgttaggttaaataattgcaaacataataaagcaaa 14166233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 97 - 136
Target Start/End: Complemental strand, 16529051 - 16529012
Alignment:
Q  97 aatttattaggttaaataattgcaaacctaataaagcaaa 136  Q
    ||||| |||||||||||||||||||||||||||| |||||    
T  16529051 aatttgttaggttaaataattgcaaacctaataaggcaaa 16529012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 97 - 136
Target Start/End: Complemental strand, 19122001 - 19121962
Alignment:
Q  97 aatttattaggttaaataattgcaaacctaataaagcaaa 136  Q
    ||||| |||||||||| |||||||||||||||||||||||    
T  19122001 aatttgttaggttaaacaattgcaaacctaataaagcaaa 19121962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 97 - 136
Target Start/End: Complemental strand, 19122337 - 19122298
Alignment:
Q  97 aatttattaggttaaataattgcaaacctaataaagcaaa 136  Q
    ||||| |||||||||| |||||||||||||||||||||||    
T  19122337 aatttgttaggttaaacaattgcaaacctaataaagcaaa 19122298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 97 - 136
Target Start/End: Original strand, 24350930 - 24350969
Alignment:
Q  97 aatttattaggttaaataattgcaaacctaataaagcaaa 136  Q
    ||||| ||||||||||||||||||||||||||||| ||||    
T  24350930 aatttgttaggttaaataattgcaaacctaataaaacaaa 24350969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 97 - 136
Target Start/End: Original strand, 24351483 - 24351522
Alignment:
Q  97 aatttattaggttaaataattgcaaacctaataaagcaaa 136  Q
    ||||| ||||||||||||||||||||||||||||| ||||    
T  24351483 aatttgttaggttaaataattgcaaacctaataaaacaaa 24351522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 97 - 136
Target Start/End: Original strand, 43395142 - 43395181
Alignment:
Q  97 aatttattaggttaaataattgcaaacctaataaagcaaa 136  Q
    ||||| |||||||||||||||| |||||||||||||||||    
T  43395142 aatttgttaggttaaataattggaaacctaataaagcaaa 43395181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 98 - 136
Target Start/End: Original strand, 26523268 - 26523306
Alignment:
Q  98 atttattaggttaaataattgcaaacctaataaagcaaa 136  Q
    |||| |||||| |||||||||||||||||||||||||||    
T  26523268 atttgttaggtcaaataattgcaaacctaataaagcaaa 26523306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 107 - 136
Target Start/End: Complemental strand, 24326609 - 24326580
Alignment:
Q  107 gttaaataattgcaaacctaataaagcaaa 136  Q
    ||||||||||||||||||||||||||||||    
T  24326609 gttaaataattgcaaacctaataaagcaaa 24326580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 107 - 136
Target Start/End: Original strand, 24350732 - 24350761
Alignment:
Q  107 gttaaataattgcaaacctaataaagcaaa 136  Q
    ||||||||||||||||||||||||||||||    
T  24350732 gttaaataattgcaaacctaataaagcaaa 24350761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 107 - 136
Target Start/End: Original strand, 24351286 - 24351315
Alignment:
Q  107 gttaaataattgcaaacctaataaagcaaa 136  Q
    ||||||||||||||||||||||||||||||    
T  24351286 gttaaataattgcaaacctaataaagcaaa 24351315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0504 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0504
Description:

Target: scaffold0504; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 97 - 136
Target Start/End: Original strand, 1545 - 1584
Alignment:
Q  97 aatttattaggttaaataattgcaaacctaataaagcaaa 136  Q
    ||||||||||||||||||||||||||| ||||||||||||    
T  1545 aatttattaggttaaataattgcaaacttaataaagcaaa 1584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 36; Significance: 0.00000000004; HSPs: 31)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 97 - 136
Target Start/End: Complemental strand, 4941772 - 4941733
Alignment:
Q  97 aatttattaggttaaataattgcaaacctaataaagcaaa 136  Q
    ||||| ||||||||||||||||||||||||||||||||||    
T  4941772 aatttgttaggttaaataattgcaaacctaataaagcaaa 4941733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 97 - 136
Target Start/End: Complemental strand, 8118475 - 8118436
Alignment:
Q  97 aatttattaggttaaataattgcaaacctaataaagcaaa 136  Q
    ||||| ||||||||||||||||||||||||||||||||||    
T  8118475 aatttgttaggttaaataattgcaaacctaataaagcaaa 8118436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 97 - 136
Target Start/End: Original strand, 21581288 - 21581327
Alignment:
Q  97 aatttattaggttaaataattgcaaacctaataaagcaaa 136  Q
    ||||| ||||||||||||||||||||||||||||||||||    
T  21581288 aatttgttaggttaaataattgcaaacctaataaagcaaa 21581327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 97 - 136
Target Start/End: Complemental strand, 22292992 - 22292953
Alignment:
Q  97 aatttattaggttaaataattgcaaacctaataaagcaaa 136  Q
    ||||| ||||||||||||||||||||||||||||||||||    
T  22292992 aatttgttaggttaaataattgcaaacctaataaagcaaa 22292953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 97 - 136
Target Start/End: Original strand, 23952516 - 23952555
Alignment:
Q  97 aatttattaggttaaataattgcaaacctaataaagcaaa 136  Q
    ||||| ||||||||||||||||||||||||||||||||||    
T  23952516 aattttttaggttaaataattgcaaacctaataaagcaaa 23952555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 97 - 136
Target Start/End: Complemental strand, 36639266 - 36639227
Alignment:
Q  97 aatttattaggttaaataattgcaaacctaataaagcaaa 136  Q
    ||||| ||||||||||||||||||||||||||||||||||    
T  36639266 aatttgttaggttaaataattgcaaacctaataaagcaaa 36639227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 97 - 136
Target Start/End: Complemental strand, 47631632 - 47631593
Alignment:
Q  97 aatttattaggttaaataattgcaaacctaataaagcaaa 136  Q
    ||||| ||||||||||||||||||||||||||||||||||    
T  47631632 aatttgttaggttaaataattgcaaacctaataaagcaaa 47631593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 97 - 136
Target Start/End: Complemental strand, 48076284 - 48076245
Alignment:
Q  97 aatttattaggttaaataattgcaaacctaataaagcaaa 136  Q
    ||||| ||||||||||||||||||||||||||||||||||    
T  48076284 aatttgttaggttaaataattgcaaacctaataaagcaaa 48076245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 97 - 136
Target Start/End: Complemental strand, 48076462 - 48076423
Alignment:
Q  97 aatttattaggttaaataattgcaaacctaataaagcaaa 136  Q
    ||||| ||||||||||||||||||||||||||||||||||    
T  48076462 aatttgttaggttaaataattgcaaacctaataaagcaaa 48076423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 98 - 136
Target Start/End: Complemental strand, 22292784 - 22292746
Alignment:
Q  98 atttattaggttaaataattgcaaacctaataaagcaaa 136  Q
    |||| ||||||||||||||||||||||||||||||||||    
T  22292784 atttgttaggttaaataattgcaaacctaataaagcaaa 22292746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 103 - 136
Target Start/End: Complemental strand, 24049653 - 24049620
Alignment:
Q  103 ttaggttaaataattgcaaacctaataaagcaaa 136  Q
    ||||||||||||||||||||||||||||||||||    
T  24049653 ttaggttaaataattgcaaacctaataaagcaaa 24049620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 103 - 136
Target Start/End: Original strand, 28379779 - 28379812
Alignment:
Q  103 ttaggttaaataattgcaaacctaataaagcaaa 136  Q
    ||||||||||||||||||||||||||||||||||    
T  28379779 ttaggttaaataattgcaaacctaataaagcaaa 28379812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 59 - 136
Target Start/End: Original strand, 52689592 - 52689669
Alignment:
Q  59 ataggaatgaaattggtacgattcannnnnnnagaagcaatttattaggttaaataattgcaaacctaataaagcaaa 136  Q
    ||||||||||||||||| |||| ||       ||| | ||||| ||||||||||||||| ||||||||||||||||||    
T  52689592 ataggaatgaaattggtgcgatgcatttttttagatgaaatttgttaggttaaataattacaaacctaataaagcaaa 52689669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 97 - 136
Target Start/End: Complemental strand, 2177358 - 2177319
Alignment:
Q  97 aatttattaggttaaataattgcaaacctaataaagcaaa 136  Q
    ||||| ||||||||| ||||||||||||||||||||||||    
T  2177358 aatttgttaggttaagtaattgcaaacctaataaagcaaa 2177319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 97 - 136
Target Start/End: Complemental strand, 7809442 - 7809403
Alignment:
Q  97 aatttattaggttaaataattgcaaacctaataaagcaaa 136  Q
    ||||| ||||||||||||||| ||||||||||||||||||    
T  7809442 aattttttaggttaaataattacaaacctaataaagcaaa 7809403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 97 - 132
Target Start/End: Complemental strand, 8079389 - 8079354
Alignment:
Q  97 aatttattaggttaaataattgcaaacctaataaag 132  Q
    ||||| ||||||||||||||||||||||||||||||    
T  8079389 aatttgttaggttaaataattgcaaacctaataaag 8079354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 97 - 136
Target Start/End: Complemental strand, 8118691 - 8118652
Alignment:
Q  97 aatttattaggttaaataattgcaaacctaataaagcaaa 136  Q
    ||||| ||||||||||||||||||| ||||||||||||||    
T  8118691 aatttgttaggttaaataattgcaaccctaataaagcaaa 8118652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 97 - 136
Target Start/End: Original strand, 21585568 - 21585607
Alignment:
Q  97 aatttattaggttaaataattgcaaacctaataaagcaaa 136  Q
    ||||| ||| ||||||||||||||||||||||||||||||    
T  21585568 aatttgttaagttaaataattgcaaacctaataaagcaaa 21585607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 105 - 136
Target Start/End: Complemental strand, 24049369 - 24049338
Alignment:
Q  105 aggttaaataattgcaaacctaataaagcaaa 136  Q
    ||||||||||||||||||||||||||||||||    
T  24049369 aggttaaataattgcaaacctaataaagcaaa 24049338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 97 - 136
Target Start/End: Original strand, 28379984 - 28380023
Alignment:
Q  97 aatttattaggttaaataattgcaaacctaataaagcaaa 136  Q
    ||||| ||||||||||||||||||||||||||||| ||||    
T  28379984 aatttgttaggttaaataattgcaaacctaataaaacaaa 28380023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 97 - 136
Target Start/End: Original strand, 28389783 - 28389822
Alignment:
Q  97 aatttattaggttaaataattgcaaacctaataaagcaaa 136  Q
    ||||| ||||||||||||| ||||||||||||||||||||    
T  28389783 aatttgttaggttaaataaatgcaaacctaataaagcaaa 28389822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 97 - 136
Target Start/End: Original strand, 43161752 - 43161791
Alignment:
Q  97 aatttattaggttaaataattgcaaacctaataaagcaaa 136  Q
    ||||| |||||||||||||||||||||||||||| |||||    
T  43161752 aatttgttaggttaaataattgcaaacctaataatgcaaa 43161791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 97 - 136
Target Start/End: Original strand, 43161937 - 43161976
Alignment:
Q  97 aatttattaggttaaataattgcaaacctaataaagcaaa 136  Q
    ||||| ||| ||||||||||||||||||||||||||||||    
T  43161937 aatttgttaagttaaataattgcaaacctaataaagcaaa 43161976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 97 - 136
Target Start/End: Complemental strand, 44500766 - 44500727
Alignment:
Q  97 aatttattaggttaaataattgcaaacctaataaagcaaa 136  Q
    ||||| ||| ||||||||||||||||||||||||||||||    
T  44500766 aatttgttacgttaaataattgcaaacctaataaagcaaa 44500727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 97 - 136
Target Start/End: Complemental strand, 47631454 - 47631415
Alignment:
Q  97 aatttattaggttaaataattgcaaacctaataaagcaaa 136  Q
    ||||| ||||||||||||||||||||||||| ||||||||    
T  47631454 aatttgttaggttaaataattgcaaacctaacaaagcaaa 47631415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 97 - 136
Target Start/End: Complemental strand, 47769046 - 47769007
Alignment:
Q  97 aatttattaggttaaataattgcaaacctaataaagcaaa 136  Q
    ||||| |||||||||||||||||||||||||| |||||||    
T  47769046 aatttgttaggttaaataattgcaaacctaatgaagcaaa 47769007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 97 - 136
Target Start/End: Complemental strand, 48076639 - 48076600
Alignment:
Q  97 aatttattaggttaaataattgcaaacctaataaagcaaa 136  Q
    ||||| |||||||||||||||| |||||||||||||||||    
T  48076639 aatttgttaggttaaataattgtaaacctaataaagcaaa 48076600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 97 - 136
Target Start/End: Original strand, 53144857 - 53144896
Alignment:
Q  97 aatttattaggttaaataattgcaaacctaataaagcaaa 136  Q
    ||||| ||||||||||||||| ||||||||||||||||||    
T  53144857 aatttgttaggttaaataattacaaacctaataaagcaaa 53144896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 97 - 136
Target Start/End: Original strand, 54653661 - 54653700
Alignment:
Q  97 aatttattaggttaaataattgcaaacctaataaagcaaa 136  Q
    ||||| ||||||||||||| ||||||||||||||||||||    
T  54653661 aatttgttaggttaaataactgcaaacctaataaagcaaa 54653700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 104 - 136
Target Start/End: Complemental strand, 7821606 - 7821574
Alignment:
Q  104 taggttaaataattgcaaacctaataaagcaaa 136  Q
    |||||||||||||| ||||||||||||||||||    
T  7821606 taggttaaataattacaaacctaataaagcaaa 7821574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 97 - 137
Target Start/End: Original strand, 8397754 - 8397794
Alignment:
Q  97 aatttattaggttaaataattgcaaacctaataaagcaaac 137  Q
    ||||| ||| ||||||||||||||||||||||||| |||||    
T  8397754 aatttgttaagttaaataattgcaaacctaataaaacaaac 8397794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0240 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0240
Description:

Target: scaffold0240; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 59 - 136
Target Start/End: Complemental strand, 13383 - 13306
Alignment:
Q  59 ataggaatgaaattggtacgattcannnnnnnagaagcaatttattaggttaaataattgcaaacctaataaagcaaa 136  Q
    ||||||||||||||||| |||| ||       ||| | ||||| ||||||||||||||||||| ||||||||||||||    
T  13383 ataggaatgaaattggtgcgatgcatttttttagatgaaatttgttaggttaaataattgcaaccctaataaagcaaa 13306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 97 - 136
Target Start/End: Complemental strand, 102797 - 102758
Alignment:
Q  97 aatttattaggttaaataattgcaaacctaataaagcaaa 136  Q
    ||||| ||||||||||||||||||||| ||||||||||||    
T  102797 aatttgttaggttaaataattgcaaacttaataaagcaaa 102758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0294 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0294
Description:

Target: scaffold0294; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 103 - 136
Target Start/End: Original strand, 12403 - 12436
Alignment:
Q  103 ttaggttaaataattgcaaacctaataaagcaaa 136  Q
    ||||||||||||||||||||||||||||| ||||    
T  12403 ttaggttaaataattgcaaacctaataaaacaaa 12436  T

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