View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15382_high_5 (Length: 369)
Name: NF15382_high_5
Description: NF15382
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15382_high_5 |
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Alignment Details
Target: chr1 (Bit Score: 248; Significance: 1e-137; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 248; E-Value: 1e-137
Query Start/End: Original strand, 65 - 353
Target Start/End: Complemental strand, 3908751 - 3908463
Alignment:
| Q |
65 |
aagctataagttcaatttcctttgccttttccaatcccacgccaatttatagtcccaacttttaccttgatatattctatgcaaattaaataattaataa |
164 |
Q |
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| T |
3908751 |
aagctataagttcaatttcctttgccttttctaatcccacgccaatttatagtcccaacttttaccttgatatattctatgcaaattaaataattaataa |
3908652 |
T |
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| Q |
165 |
ctaccctctttttcccatgtatatatacatgttccctcnnnnnnntatgcgtgtaatgttagcaacttcatttaccaatttccttcacactttacatttg |
264 |
Q |
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||||||||| |||||||||||||||||||||||||||| |||| |||| ||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
3908651 |
ctaccctctatttcccatgtatatatacatgttccctcaaaaaaatatgtgtgttatgttagcaacttcatttaccaatttccttcacactttacatttg |
3908552 |
T |
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| Q |
265 |
ttacacctcttagttcaaccatggctgactgtgatgttgaaacagttctttcctatcgttgcttgacaggtatgttagtttccattcat |
353 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |
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| T |
3908551 |
ttacacctcttagttcaaccatggctgactgtgatgttgaaacagttctttcctattgttgcttgacaggtatgttagtttccattcat |
3908463 |
T |
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