View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15388_high_11 (Length: 221)
Name: NF15388_high_11
Description: NF15388
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15388_high_11 |
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Alignment Details
Target: chr2 (Bit Score: 173; Significance: 3e-93; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 173; E-Value: 3e-93
Query Start/End: Original strand, 21 - 209
Target Start/End: Original strand, 39984365 - 39984553
Alignment:
| Q |
21 |
gaagacacaatagctgaagtggaactagaagatgaacatgttggtgatgatatagaagataaagtgcaaacacaacaaacacttttctcacatttaccat |
120 |
Q |
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| T |
39984365 |
gaagacacaatagctgaagtggaactagaagatgaacatgttggtgatgaagaagaagataaagtgcaaacacaacaaacacttttctcacatttaccat |
39984464 |
T |
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| Q |
121 |
tgctacacacattcttcttaacttcagttatggaatcattcagatcaatttccatgaacacctacaatgttttgtggttggttcatctc |
209 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |
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| T |
39984465 |
tgctacacacattcttcttaacttcagttatggaatcattcagatcaatttccatgaacacctacaatgttttgtggttggttcttctc |
39984553 |
T |
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