View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1538_low_19 (Length: 276)

Name: NF1538_low_19
Description: NF1538
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1538_low_19
NF1538_low_19
[»] chr7 (5 HSPs)
chr7 (4-219)||(24903623-24903842)
chr7 (69-150)||(5862765-5862846)
chr7 (62-135)||(2463433-2463506)
chr7 (71-135)||(27597697-27597760)
chr7 (35-135)||(2463117-2463218)
[»] chr3 (5 HSPs)
chr3 (35-150)||(40195902-40196018)
chr3 (35-148)||(16143399-16143512)
chr3 (20-135)||(23162131-23162246)
chr3 (40-135)||(43978672-43978768)
chr3 (74-135)||(43481588-43481649)
[»] chr8 (4 HSPs)
chr8 (20-150)||(2954307-2954437)
chr8 (35-135)||(5981539-5981640)
chr8 (99-148)||(3670883-3670932)
chr8 (67-135)||(5981830-5981898)
[»] chr2 (5 HSPs)
chr2 (35-150)||(19548106-19548220)
chr2 (35-137)||(11727741-11727843)
chr2 (71-148)||(28226334-28226411)
chr2 (71-135)||(13792591-13792655)
chr2 (99-135)||(19547894-19547930)
[»] chr4 (6 HSPs)
chr4 (35-148)||(10396377-10396490)
chr4 (38-190)||(47680584-47680741)
chr4 (10-148)||(11197162-11197300)
chr4 (71-135)||(10396128-10396192)
chr4 (35-86)||(47680873-47680925)
chr4 (35-131)||(47681117-47681216)
[»] chr6 (4 HSPs)
chr6 (35-135)||(7301397-7301497)
chr6 (70-133)||(6250080-6250143)
chr6 (20-86)||(11637867-11637933)
chr6 (74-132)||(15092059-15092117)
[»] chr5 (4 HSPs)
chr5 (35-135)||(13042673-13042773)
chr5 (35-135)||(13112671-13112771)
chr5 (74-131)||(26420849-26420906)
chr5 (72-135)||(34103552-34103615)
[»] chr1 (1 HSPs)
chr1 (35-150)||(31973417-31973532)


Alignment Details
Target: chr7 (Bit Score: 167; Significance: 2e-89; HSPs: 5)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 167; E-Value: 2e-89
Query Start/End: Original strand, 4 - 219
Target Start/End: Original strand, 24903623 - 24903842
Alignment:
Q  4 gagtgagatccaggtatggatcaatctactaatgtgggtgactcacacttgaaggggggattattgaaaatcaagtgtgagtggataggttccaaatcga 103  Q
    |||||||||||  ||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||    
T  24903623 gagtgagatcctagtatggatcaatctactaacgtgggtgactcacacttgaagggaggattattgaaaatcaagtgtgagtgggtaggttccaaatcga 24903722  T
Q  104 ttagaaatggaggaaatgttggatatataagatatgatacccata----taatacattaaagtttttgatgtagatgtggtgtctaagtctgttagtgat 199  Q
    |||||||||||||||||||||||||||||||||||||||||| ||    |||||| ||||||||||||||| ||||||||||||||| ||||||||||||    
T  24903723 ttagaaatggaggaaatgttggatatataagatatgatacccgtataactaataccttaaagtttttgatgcagatgtggtgtctaaatctgttagtgat 24903822  T
Q  200 catgaactagcacattgctt 219  Q
    ||||||||||||||||||||    
T  24903823 catgaactagcacattgctt 24903842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 69 - 150
Target Start/End: Complemental strand, 5862846 - 5862765
Alignment:
Q  69 gaaaatcaagtgtgagtggataggttccaaatcgattagaaatggaggaaatgttggatatataagatatgatacccatata 150  Q
    ||||||||||||||||||  ||  | |||||| ||||||||| |||||||||||||||||||||||| ||||||||||||||    
T  5862846 gaaaatcaagtgtgagtgattatatcccaaattgattagaaaaggaggaaatgttggatatataagagatgatacccatata 5862765  T

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Target: chr7; HSP #3
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 62 - 135
Target Start/End: Original strand, 2463433 - 2463506
Alignment:
Q  62 gattattgaaaatcaagtgtgagtggataggttccaaatcgattagaaatggaggaaatgttggatatataaga 135  Q
    ||||||| ||||||||||||||||   || || ||| || | ||||||||||||||||| ||||||||||||||    
T  2463433 gattattaaaaatcaagtgtgagtaattatgtcccacattggttagaaatggaggaaatattggatatataaga 2463506  T

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Target: chr7; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 71 - 135
Target Start/End: Original strand, 27597697 - 27597760
Alignment:
Q  71 aaatcaagtgtgagtggataggttccaaatcgattagaaatggaggaaatgttggatatataaga 135  Q
    |||| ||||||||||| |||  ||||| ||||||||||||||||| ||| |||||||||||||||    
T  27597697 aaattaagtgtgagtg-atatattccacatcgattagaaatggagcaaacgttggatatataaga 27597760  T

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Target: chr7; HSP #5
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 35 - 135
Target Start/End: Original strand, 2463117 - 2463218
Alignment:
Q  35 atgtgggtgactcacacttgaaggggggattatt-gaaaatcaagtgtgagtggataggttccaaatcgattagaaatggaggaaatgttggatatataa 133  Q
    ||||||||||||||||||| | | |  |||| || |||||| |||||||||||  || ||  || ||||| ||||||  |||||||||||||||||||||    
T  2463117 atgtgggtgactcacactttaggagaagattgttggaaaattaagtgtgagtgattatgtctcacatcgactagaaaatgaggaaatgttggatatataa 2463216  T
Q  134 ga 135  Q
    ||    
T  2463217 ga 2463218  T

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Target: chr3 (Bit Score: 49; Significance: 4e-19; HSPs: 5)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 35 - 150
Target Start/End: Complemental strand, 40196018 - 40195902
Alignment:
Q  35 atgtgggtgactcacacttgaaggggggattattga-aaatcaagtgtgagtggataggttccaaatcgattagaaatggaggaaatgttggatatataa 133  Q
    ||||||||||||||||||||| |||| |||| |||  ||||||||||||||||  || ||| || ||||| ||| ||||||||||| |||||||||||||    
T  40196018 atgtgggtgactcacacttgagggggagattgttgggaaatcaagtgtgagtgattatgtttcacatcgactaggaatggaggaaacgttggatatataa 40195919  T
Q  134 gatatgatacccatata 150  Q
    || | || |||||||||    
T  40195918 gagaggagacccatata 40195902  T

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Target: chr3; HSP #2
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 35 - 148
Target Start/End: Original strand, 16143399 - 16143512
Alignment:
Q  35 atgtgggtgactcacacttgaaggggggattattgaaaatcaagtgtgagtggataggttccaaatcgattagaaatggaggaaatgttggatatataag 134  Q
    |||||||||| |||||||||| |||| |||| ||| ||||||||||||||||   | |||||| |||   ||||||||||| ||||||||||||||||||    
T  16143399 atgtgggtgagtcacacttgagggggagattgttggaaatcaagtgtgagtgataatgttccacatctgctagaaatggagcaaatgttggatatataag 16143498  T
Q  135 atatgatacccata 148  Q
    | | || |||||||    
T  16143499 agacgagacccata 16143512  T

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Target: chr3; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 20 - 135
Target Start/End: Original strand, 23162131 - 23162246
Alignment:
Q  20 tggatcaatctactaatgtgggtgactcacacttgaaggggggattattga-aaatcaagtgtgagtggataggttccaaatcgattagaaatggaggaa 118  Q
    |||||||  ||| ||||||||||||||||||||||| |||||||||  ||| |||| |||||||||||  || || ||| ||||||||| ||||||||||    
T  23162131 tggatcaggctagtaatgtgggtgactcacacttga-ggggggattggtgagaaataaagtgtgagtgattatgtcccacatcgattaggaatggaggaa 23162229  T
Q  119 atgttggatatataaga 135  Q
    | |||||| ||||||||    
T  23162230 acgttggacatataaga 23162246  T

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Target: chr3; HSP #4
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 40 - 135
Target Start/End: Complemental strand, 43978768 - 43978672
Alignment:
Q  40 ggtgactcacacttgaaggggggattattg-aaaatcaagtgtgagtggataggttccaaatcgattagaaatggaggaaatgttggatatataaga 135  Q
    ||||| |||||||||| |||| |||| ||| |||||||||||||||||  || || ||| ||||| ||| |||||||||||  ||||||||||||||    
T  43978768 ggtgattcacacttgagggggagattgttggaaaatcaagtgtgagtgattatgtcccacatcgactaggaatggaggaaacattggatatataaga 43978672  T

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Target: chr3; HSP #5
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 74 - 135
Target Start/End: Original strand, 43481588 - 43481649
Alignment:
Q  74 tcaagtgtgagtggataggttccaaatcgattagaaatggaggaaatgttggatatataaga 135  Q
    |||||||||||||  || ||  || ||||| ||| |||||||||||||||||||||||||||    
T  43481588 tcaagtgtgagtgattatgtctcacatcgactaggaatggaggaaatgttggatatataaga 43481649  T

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Target: chr8 (Bit Score: 47; Significance: 7e-18; HSPs: 4)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 20 - 150
Target Start/End: Complemental strand, 2954437 - 2954307
Alignment:
Q  20 tggatcaatctactaatgtgggtgactcacacttgaaggggggattattgaaaatcaagtgtgagtggataggttccaaatcgattagaaatggaggaaa 119  Q
    |||||||| ||| | ||||||||||||||||||||| |||| |||| ||||   |||||||||||||  ||  | ||| ||||| ||| ||||||| |||    
T  2954437 tggatcaagctagtgatgtgggtgactcacacttgagggggagattgttgagtttcaagtgtgagtgattatttcccacatcgactaggaatggagaaaa 2954338  T
Q  120 tgttggatatataagatatgatacccatata 150  Q
    |||||||||||||||| | || |||||||||    
T  2954337 tgttggatatataagagaggagacccatata 2954307  T

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Target: chr8; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 35 - 135
Target Start/End: Complemental strand, 5981640 - 5981539
Alignment:
Q  35 atgtgggtgactcacacttgaaggggggattatt-gaaaatcaagtgtgagtggataggttccaaatcgattagaaatggaggaaatgttggatatataa 133  Q
    ||||||||||||||| ||||| |||| |||| || | ||||||||||||||||  || || ||| ||||| ||| ||||||| ||| |||||||||||||    
T  5981640 atgtgggtgactcacgcttgagggggagattgtttggaaatcaagtgtgagtgattatgtcccacatcgactaggaatggagaaaacgttggatatataa 5981541  T
Q  134 ga 135  Q
    ||    
T  5981540 ga 5981539  T

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Target: chr8; HSP #3
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 99 - 148
Target Start/End: Complemental strand, 3670932 - 3670883
Alignment:
Q  99 atcgattagaaatggaggaaatgttggatatataagatatgatacccata 148  Q
    ||||| ||||||||||||||| ||||||||||||||| |||| |||||||    
T  3670932 atcgactagaaatggaggaaacgttggatatataagagatgagacccata 3670883  T

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Target: chr8; HSP #4
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 67 - 135
Target Start/End: Complemental strand, 5981898 - 5981830
Alignment:
Q  67 ttgaaaatcaagtgtgagtggataggttccaaatcgattagaaatggaggaaatgttggatatataaga 135  Q
    |||| ||||||||||||| |  || || ||| ||| ||||| ||||||||||| |||||||||||||||    
T  5981898 ttgataatcaagtgtgagggattatgtcccacatcaattaggaatggaggaaacgttggatatataaga 5981830  T

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Target: chr2 (Bit Score: 44; Significance: 4e-16; HSPs: 5)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 35 - 150
Target Start/End: Original strand, 19548106 - 19548220
Alignment:
Q  35 atgtgggtgactcacacttgaaggggggattattgaaaatcaagtgtgagtggataggttccaaatcgattagaaatggaggaaatgttggatatataag 134  Q
    ||||||||||||||||||||| || |||||| |||    ||||| |||||||| || || ||| ||||| ||||||| ||||||||||||||||||||||    
T  19548106 atgtgggtgactcacacttga-ggagggattgttgggtttcaagcgtgagtggttatgtcccacatcgactagaaatagaggaaatgttggatatataag 19548204  T
Q  135 atatgatacccatata 150  Q
    | | || |||||||||    
T  19548205 agaggagacccatata 19548220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 35 - 137
Target Start/End: Complemental strand, 11727843 - 11727741
Alignment:
Q  35 atgtgggtgactcacacttgaaggggggattattgaaaatcaagtgtgagtggataggttccaaatcgattagaaatggaggaaatgttggatatataag 134  Q
    |||||||||||||||||| ||  ||| ||||||||||||| ||||||||||   || |||| | || || ||||||||||| ||| ||| |||||| |||    
T  11727843 atgtgggtgactcacactcgagagggagattattgaaaattaagtgtgagtaattatgttctacattgactagaaatggagaaaacgttagatataaaag 11727744  T
Q  135 ata 137  Q
    |||    
T  11727743 ata 11727741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 71 - 148
Target Start/End: Original strand, 28226334 - 28226411
Alignment:
Q  71 aaatcaagtgtgagtggataggttccaaatcgattagaaatggaggaaatgttggatatataagatatgatacccata 148  Q
    ||||||||||||||||   | || ||| ||||| ||||||||||||||| ||||||||||||||| | || |||||||    
T  28226334 aaatcaagtgtgagtgttaatgtcccacatcgactagaaatggaggaaacgttggatatataagagaggagacccata 28226411  T

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Target: chr2; HSP #4
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 71 - 135
Target Start/End: Complemental strand, 13792655 - 13792591
Alignment:
Q  71 aaatcaagtgtgagtggataggttccaaatcgattagaaatggaggaaatgttggatatataaga 135  Q
    ||||||||||||||||  || || ||| ||| | |||||||||||||||| || |||||||||||    
T  13792655 aaatcaagtgtgagtgattatgtcccacatcaactagaaatggaggaaatatttgatatataaga 13792591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 99 - 135
Target Start/End: Original strand, 19547894 - 19547930
Alignment:
Q  99 atcgattagaaatggaggaaatgttggatatataaga 135  Q
    ||||| |||||||||| ||||||||||||||||||||    
T  19547894 atcgactagaaatggaagaaatgttggatatataaga 19547930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 6)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 35 - 148
Target Start/End: Original strand, 10396377 - 10396490
Alignment:
Q  35 atgtgggtgactcacacttgaaggggggattattgaaaatcaagtgtgagtggataggttccaaatcgattagaaatggaggaaatgttggatatataag 134  Q
    ||||||| || ||| |||||| |||| |||| ||| ||||||||||||||||  || ||  || || || ||||||||||||||||||||||||||||||    
T  10396377 atgtgggcgagtcatacttgagggggagattgttggaaatcaagtgtgagtgattatgtctcatattgactagaaatggaggaaatgttggatatataag 10396476  T
Q  135 atatgatacccata 148  Q
    | | || |||||||    
T  10396477 agaggagacccata 10396490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 38 - 190
Target Start/End: Original strand, 47680584 - 47680741
Alignment:
Q  38 tgggtgactcacacttgaaggggggattattg-aaaatcaagtgtgagtggataggttccaaatcgattagaaatggaggaaatgttggatatataagat 136  Q
    |||||||||||||||||| |||  |||| ||| ||||| |||||||||||  || || ||| |||||||| ||||||||||||  ||| ||||||| ||     
T  47680584 tgggtgactcacacttgaggggaagattgttggaaaattaagtgtgagtgattatgtcccacatcgattataaatggaggaaacattgaatatatatgag 47680683  T
Q  137 atgatacccatata----atacattaaagtttttgatgtagatgtggtgtctaagtct 190  Q
    | || |||||||||    || | |||| ||||| | || |||||||||||||||||||    
T  47680684 aggagacccatatacctgatgccttaaggttttgggtggagatgtggtgtctaagtct 47680741  T

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Target: chr4; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 10 - 148
Target Start/End: Original strand, 11197162 - 11197300
Alignment:
Q  10 gatccaggtatggatcaatctactaatgtgggtgactcacacttgaaggggggattattgaaaatcaagtgtgagtggataggttccaaatcgattagaa 109  Q
    ||||| ||| |||||||  ||| | |||||||||| | ||||||||  ||| |||| || |||| ||||||||||||  || |   || ||||| |||||    
T  11197162 gatcctggtgtggatcatcctagtgatgtgggtgagtaacacttgattgggagattgttaaaaaccaagtgtgagtgattatgcctcacatcgactagaa 11197261  T
Q  110 atggaggaaatgttggatatataagatatgatacccata 148  Q
    |||||||||| ||||||||||||||| | || |||||||    
T  11197262 atggaggaaacgttggatatataagagaggagacccata 11197300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 71 - 135
Target Start/End: Original strand, 10396128 - 10396192
Alignment:
Q  71 aaatcaagtgtgagtggataggttccaaatcgattagaaatggaggaaatgttggatatataaga 135  Q
    ||||||||||||||||  || ||  || |||||  ||||||||||||||||||| ||||||||||    
T  10396128 aaatcaagtgtgagtgattatgtctcacatcgacaagaaatggaggaaatgttgaatatataaga 10396192  T

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Target: chr4; HSP #5
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 35 - 86
Target Start/End: Original strand, 47680873 - 47680925
Alignment:
Q  35 atgtgggtgactcacacttgaaggggggattatt-gaaaatcaagtgtgagtg 86  Q
    ||||||||||||||||||||| |||| |||| || | ||||||||||||||||    
T  47680873 atgtgggtgactcacacttgagggggagattgttgggaaatcaagtgtgagtg 47680925  T

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Target: chr4; HSP #6
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 35 - 131
Target Start/End: Original strand, 47681117 - 47681216
Alignment:
Q  35 atgtgggtgact--cacacttgaaggggggattattga-aaatcaagtgtgagtggataggttccaaatcgattagaaatggaggaaatgttggatatat 131  Q
    ||||||||||||  ||||||||| |||| |||| |||  |||| |||||||||||  || || ||  ||||||||||||||||||||| ||| |||||||    
T  47681117 atgtgggtgactaacacacttgagggggagattgttgggaaataaagtgtgagtgattatgtcccgcatcgattagaaatggaggaaacgtttgatatat 47681216  T

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Target: chr6 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 4)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 35 - 135
Target Start/End: Complemental strand, 7301497 - 7301397
Alignment:
Q  35 atgtgggtgactcacacttgaaggggggattattgaaaatcaagtgtgagtggataggttccaaatcgattagaaatggaggaaatgttggatatataag 134  Q
    |||||||||| ||||| |||| | ||  ||| |||||||| |||||||||||  || || ||| ||||| ||||||||||||||| ||||||||||||||    
T  7301497 atgtgggtgagtcacagttgaggaggatattgttgaaaattaagtgtgagtgattatgtcccacatcgactagaaatggaggaaacgttggatatataag 7301398  T
Q  135 a 135  Q
    |    
T  7301397 a 7301397  T

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Target: chr6; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 70 - 133
Target Start/End: Original strand, 6250080 - 6250143
Alignment:
Q  70 aaaatcaagtgtgagtggataggttccaaatcgattagaaatggaggaaatgttggatatataa 133  Q
    |||||||||||||||||  || || ||| |||||||| | ||||||||||||||||||||||||    
T  6250080 aaaatcaagtgtgagtgattatgtcccacatcgattaaacatggaggaaatgttggatatataa 6250143  T

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Target: chr6; HSP #3
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 86
Target Start/End: Complemental strand, 11637933 - 11637867
Alignment:
Q  20 tggatcaatctactaatgtgggtgactcacacttgaaggggggattattgaaaatcaagtgtgagtg 86  Q
    ||||||| |||| | |||||| ||| |||||||||| |||  |||| ||||||||||||||||||||    
T  11637933 tggatcattctagtcatgtggttgagtcacacttgaggggaagattgttgaaaatcaagtgtgagtg 11637867  T

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Target: chr6; HSP #4
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 74 - 132
Target Start/End: Original strand, 15092059 - 15092117
Alignment:
Q  74 tcaagtgtgagtggataggttccaaatcgattagaaatggaggaaatgttggatatata 132  Q
    |||||||||||||| ||  | ||| ||||||||||||| ||| ||||||||||||||||    
T  15092059 tcaagtgtgagtggttaaataccacatcgattagaaattgagaaaatgttggatatata 15092117  T

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Target: chr5 (Bit Score: 37; Significance: 0.000000000006; HSPs: 4)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 35 - 135
Target Start/End: Original strand, 13042673 - 13042773
Alignment:
Q  35 atgtgggtgactcacacttgaaggggggattattgaaaatcaagtgtgagtggataggttccaaatcgattagaaatggaggaaatgttggatatataag 134  Q
    |||||||||| |||||||||| ||||||| | ||| ||||||||||||||||  || || ||| ||| | ||||||||||| |||  || ||||||||||    
T  13042673 atgtgggtgagtcacacttgagggggggactgttggaaatcaagtgtgagtgattatgtgccacatcaactagaaatggagcaaacattagatatataag 13042772  T
Q  135 a 135  Q
    |    
T  13042773 a 13042773  T

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Target: chr5; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 35 - 135
Target Start/End: Original strand, 13112671 - 13112771
Alignment:
Q  35 atgtgggtgactcacacttgaaggggggattattgaaaatcaagtgtgagtggataggttccaaatcgattagaaatggaggaaatgttggatatataag 134  Q
    |||||||||| |||||||||| ||||||| | ||| ||||||||||||||||  || || ||| ||| | ||||||||||| |||  || ||||||||||    
T  13112671 atgtgggtgagtcacacttgagggggggactgttggaaatcaagtgtgagtgattatgtgccacatcaactagaaatggagcaaacattagatatataag 13112770  T
Q  135 a 135  Q
    |    
T  13112771 a 13112771  T

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Target: chr5; HSP #3
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 74 - 131
Target Start/End: Complemental strand, 26420906 - 26420849
Alignment:
Q  74 tcaagtgtgagtggataggttccaaatcgattagaaatggaggaaatgttggatatat 131  Q
    |||||||||||| | || || ||| ||||| |||||||||||||||||||||||||||    
T  26420906 tcaagtgtgagtagttaagtcccacatcgactagaaatggaggaaatgttggatatat 26420849  T

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Target: chr5; HSP #4
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 72 - 135
Target Start/End: Original strand, 34103552 - 34103615
Alignment:
Q  72 aatcaagtgtgagtggataggttccaaatcgattagaaatggaggaaatgttggatatataaga 135  Q
    |||||||||||||||  || |||||| ||||| ||||||||||||||||   ||||||||||||    
T  34103552 aatcaagtgtgagtgattatgttccacatcgaatagaaatggaggaaataaaggatatataaga 34103615  T

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Target: chr1 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 35 - 150
Target Start/End: Complemental strand, 31973532 - 31973417
Alignment:
Q  35 atgtgggtgactcacacttgaaggggggattattgaaaatcaagtgtgagtggataggttccaaatcgattagaaatggaggaaatgttggatatataag 134  Q
    ||||| |||| |||||||||| |||| |||| ||| ||||||||||||||||  || ||  || | ||| ||||||||||||||  |||  |||||||||    
T  31973532 atgtgagtgagtcacacttgagggggagattgttggaaatcaagtgtgagtgattatgtctcacaccgactagaaatggaggaaccgttacatatataag 31973433  T
Q  135 atatgatacccatata 150  Q
    | | ||||| ||||||    
T  31973432 agaggatacacatata 31973417  T

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