View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15391_high_2 (Length: 274)
Name: NF15391_high_2
Description: NF15391
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15391_high_2 |
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Alignment Details
Target: chr3 (Bit Score: 232; Significance: 1e-128; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 232; E-Value: 1e-128
Query Start/End: Original strand, 18 - 264
Target Start/End: Complemental strand, 52593244 - 52593000
Alignment:
| Q |
18 |
tagtaaaaagttgaatgttgccaaggttactatgactgtttctaactttagaatcgatgtatgtatgtatgtaatgagtgttggattatttgttctattc |
117 |
Q |
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| T |
52593244 |
tagtaaaaagttgaatgttgccaaggttactatgactgtttctaactttagaatcgatgtatgtat--atgtaatgagtgttggattatttgttctattc |
52593147 |
T |
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| Q |
118 |
ttgattgattagggattccctgttttagcaaattttttacattagttttctcaacaaatataaatcacatttagacagggaaactatgttctgcacacgt |
217 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
52593146 |
ttgattgattagggattccctgttttagcaaattttttacattagttttctcaacaaatataaatcacatttagacagggaaactatgttctgcacacgt |
52593047 |
T |
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| Q |
218 |
ggagttgatggttttctggctttatcgttgtttgtctaattttcatc |
264 |
Q |
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| T |
52593046 |
ggagttgatggttttctggctttatcgttgtttctctaattttcatc |
52593000 |
T |
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