View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15391_high_3 (Length: 236)
Name: NF15391_high_3
Description: NF15391
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15391_high_3 |
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Alignment Details
Target: chr3 (Bit Score: 156; Significance: 5e-83; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 156; E-Value: 5e-83
Query Start/End: Original strand, 46 - 221
Target Start/End: Original strand, 1702916 - 1703091
Alignment:
| Q |
46 |
ttgaattgagttaatagacttttcttcgatacatatattgcagaacctcccgaacctggtattaccttgggacattgttatttgtttcctagctcttggc |
145 |
Q |
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| T |
1702916 |
ttgaattgagttaatagacttttcttctatacatatattgcagaacctcctgaacctggtattaccttgggacattgttatttgtttcctagctcttggc |
1703015 |
T |
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| Q |
146 |
atctatacatatcatgcgtgtttagctagtcccataataaaattttctcttgtaataaaagaaccaccaaaatact |
221 |
Q |
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|||||||||||||||| ||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||| |
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| T |
1703016 |
atctatacatatcatgtgtgtttagctattcccttaataaaattttctcttgtaataaaagaaccaccaaaatact |
1703091 |
T |
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