View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15393_high_30 (Length: 220)
Name: NF15393_high_30
Description: NF15393
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15393_high_30 |
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Alignment Details
Target: chr4 (Bit Score: 152; Significance: 1e-80; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 152; E-Value: 1e-80
Query Start/End: Original strand, 16 - 199
Target Start/End: Original strand, 21722994 - 21723177
Alignment:
| Q |
16 |
aatataaaggagaccatcgactgatgacaaacaatgttgagatttcactaacaacaaagtgccannnnnnnnccttcacaaacacggagacaattgtttt |
115 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |
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| T |
21722994 |
aatataaaggagaccatcgactgatgacaaacaatgttgagatttcactaacaacaaagtgccattttttttccttcacaaacacggagacaattgtttt |
21723093 |
T |
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| Q |
116 |
cactaagaacaaaatgtcattttatattttattttgcaggtcctaaggataaccattcttttctttttaattgagtaaagatgg |
199 |
Q |
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|||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||| |
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| T |
21723094 |
cactaagaacaaaatgtcattttatattttattttgcaggtcttaagaataaccattcttttctttttaattgagtaaagatgg |
21723177 |
T |
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