View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF15393_low_16 (Length: 408)

Name: NF15393_low_16
Description: NF15393
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF15393_low_16
NF15393_low_16
[»] chr5 (49 HSPs)
chr5 (165-365)||(6252386-6252589)
chr5 (1-75)||(6252235-6252309)
chr5 (228-284)||(42522722-42522778)
chr5 (213-280)||(40483058-40483125)
chr5 (230-283)||(14725289-14725342)
chr5 (213-284)||(27598335-27598406)
chr5 (203-282)||(35695243-35695322)
chr5 (234-284)||(835634-835684)
chr5 (234-284)||(40693304-40693354)
chr5 (216-285)||(11487234-11487303)
chr5 (234-283)||(14861849-14861898)
chr5 (175-284)||(27175125-27175234)
chr5 (168-284)||(3955849-3955965)
chr5 (212-284)||(39850393-39850465)
chr5 (213-284)||(13998626-13998697)
chr5 (177-284)||(19840291-19840398)
chr5 (189-284)||(43530534-43530629)
chr5 (203-292)||(28727900-28727987)
chr5 (213-278)||(3945184-3945249)
chr5 (199-284)||(39178135-39178220)
chr5 (228-273)||(39585056-39585101)
chr5 (172-284)||(41879797-41879910)
chr5 (202-262)||(31202017-31202077)
chr5 (8-66)||(1951545-1951604)
chr5 (237-292)||(3165635-3165690)
chr5 (213-284)||(11487526-11487596)
chr5 (229-284)||(14001125-14001180)
chr5 (209-284)||(18282271-18282346)
chr5 (213-285)||(28040231-28040305)
chr5 (213-284)||(29686229-29686300)
chr5 (240-282)||(11832445-11832487)
chr5 (8-66)||(14369779-14369837)
chr5 (234-284)||(16321027-16321077)
chr5 (214-284)||(29663396-29663466)
chr5 (232-281)||(42170064-42170114)
chr5 (231-284)||(833873-833926)
chr5 (203-284)||(4460475-4460556)
chr5 (231-284)||(23085345-23085398)
chr5 (172-284)||(27263830-27263943)
chr5 (172-284)||(28394658-28394771)
chr5 (247-284)||(37516893-37516930)
chr5 (228-284)||(14205324-14205380)
chr5 (252-284)||(14930730-14930762)
chr5 (213-273)||(17704300-17704360)
chr5 (256-284)||(32654039-32654067)
chr5 (249-285)||(35627245-35627281)
chr5 (252-280)||(36629689-36629717)
chr5 (6-66)||(39548952-39549012)
chr5 (230-278)||(41863326-41863374)
[»] chr2 (36 HSPs)
chr2 (175-280)||(23914731-23914836)
chr2 (190-284)||(23914547-23914641)
chr2 (212-284)||(35468717-35468789)
chr2 (213-284)||(744911-744982)
chr2 (234-284)||(30675544-30675594)
chr2 (203-280)||(21384663-21384740)
chr2 (175-283)||(13277888-13277995)
chr2 (203-280)||(41860288-41860365)
chr2 (209-284)||(6674931-6675006)
chr2 (173-284)||(26966407-26966518)
chr2 (234-284)||(34118958-34119008)
chr2 (172-284)||(352320-352433)
chr2 (203-284)||(14690108-14690188)
chr2 (228-284)||(10886557-10886613)
chr2 (228-284)||(11538383-11538439)
chr2 (167-267)||(16568210-16568310)
chr2 (229-284)||(11694218-11694273)
chr2 (213-284)||(21501188-21501258)
chr2 (250-284)||(9546131-9546165)
chr2 (227-281)||(12541464-12541518)
chr2 (250-284)||(29353776-29353810)
chr2 (234-284)||(31054297-31054347)
chr2 (234-284)||(31525272-31525322)
chr2 (188-250)||(33838925-33838987)
chr2 (250-284)||(34423875-34423909)
chr2 (203-284)||(40324373-40324455)
chr2 (228-285)||(2001175-2001232)
chr2 (213-274)||(7301588-7301649)
chr2 (199-284)||(8904960-8905045)
chr2 (234-283)||(18175261-18175310)
chr2 (203-284)||(19133856-19133937)
chr2 (212-284)||(3752482-3752554)
chr2 (236-284)||(9402894-9402942)
chr2 (228-284)||(29241767-29241823)
chr2 (228-284)||(34983769-34983825)
chr2 (226-262)||(44104134-44104170)
[»] chr8 (34 HSPs)
chr8 (182-284)||(15920025-15920126)
chr8 (203-269)||(7975945-7976011)
chr8 (228-284)||(4438542-4438598)
chr8 (213-284)||(13206130-13206201)
chr8 (228-283)||(19341860-19341915)
chr8 (203-284)||(11420424-11420505)
chr8 (178-270)||(35173369-35173462)
chr8 (200-284)||(4205161-4205245)
chr8 (234-284)||(2442259-2442309)
chr8 (238-284)||(23038506-23038552)
chr8 (222-284)||(34103436-34103498)
chr8 (172-285)||(36801828-36801942)
chr8 (172-284)||(1657861-1657974)
chr8 (199-284)||(11439069-11439154)
chr8 (203-284)||(34882270-34882350)
chr8 (203-283)||(3539284-3539364)
chr8 (213-277)||(40038900-40038964)
chr8 (254-293)||(4437486-4437525)
chr8 (220-283)||(6629149-6629211)
chr8 (238-285)||(11912045-11912092)
chr8 (213-284)||(16337997-16338068)
chr8 (213-284)||(41790317-41790388)
chr8 (214-284)||(8082798-8082868)
chr8 (8-66)||(26042967-26043025)
chr8 (213-267)||(29038011-29038065)
chr8 (234-284)||(30567813-30567863)
chr8 (236-282)||(41372490-41372536)
chr8 (172-284)||(415130-415243)
chr8 (228-273)||(11876444-11876489)
chr8 (228-273)||(11891451-11891496)
chr8 (172-284)||(14031758-14031871)
chr8 (172-284)||(37402202-37402315)
chr8 (202-283)||(39199211-39199292)
chr8 (247-283)||(40721264-40721300)
[»] chr7 (42 HSPs)
chr7 (216-287)||(1292083-1292154)
chr7 (209-285)||(47437806-47437882)
chr7 (213-292)||(10039414-10039493)
chr7 (214-284)||(32358849-32358919)
chr7 (199-284)||(43358729-43358814)
chr7 (232-284)||(35338366-35338418)
chr7 (213-292)||(10039626-10039705)
chr7 (234-284)||(29285585-29285635)
chr7 (204-273)||(40358459-40358528)
chr7 (182-262)||(10040844-10040924)
chr7 (209-273)||(39617376-39617440)
chr7 (213-284)||(9059314-9059385)
chr7 (234-285)||(44410537-44410588)
chr7 (234-284)||(42181693-42181743)
chr7 (172-284)||(5096512-5096625)
chr7 (203-284)||(14624025-14624106)
chr7 (227-284)||(38237488-38237545)
chr7 (228-273)||(40659460-40659505)
chr7 (199-267)||(31177346-31177414)
chr7 (174-284)||(4962258-4962368)
chr7 (213-284)||(37250655-37250726)
chr7 (216-279)||(41750288-41750351)
chr7 (8-66)||(45225288-45225347)
chr7 (8-66)||(45225421-45225480)
chr7 (8-66)||(938923-938981)
chr7 (203-284)||(4094301-4094380)
chr7 (228-282)||(4492630-4492684)
chr7 (214-284)||(5789219-5789289)
chr7 (203-284)||(7192301-7192385)
chr7 (233-283)||(8146064-8146114)
chr7 (214-284)||(13640921-13640991)
chr7 (214-272)||(21819549-21819607)
chr7 (199-284)||(31309725-31309811)
chr7 (202-284)||(35791927-35792008)
chr7 (213-282)||(11485596-11485665)
chr7 (231-284)||(25603045-25603097)
chr7 (228-285)||(32310772-32310829)
chr7 (213-273)||(14625122-14625182)
chr7 (203-267)||(25611217-25611281)
chr7 (212-284)||(27362826-27362898)
chr7 (203-267)||(34751869-34751933)
chr7 (8-64)||(38367968-38368024)
[»] chr3 (43 HSPs)
chr3 (173-284)||(37681301-37681412)
chr3 (213-284)||(19578675-19578746)
chr3 (234-284)||(17583224-17583274)
chr3 (177-283)||(26513024-26513130)
chr3 (203-284)||(2594462-2594543)
chr3 (176-261)||(2699525-2699610)
chr3 (214-283)||(14771256-14771325)
chr3 (172-284)||(28247262-28247374)
chr3 (205-284)||(54114326-54114403)
chr3 (212-274)||(1149688-1149750)
chr3 (203-285)||(37761154-37761236)
chr3 (174-267)||(7982812-7982904)
chr3 (228-281)||(34804381-34804434)
chr3 (199-284)||(39948866-39948951)
chr3 (234-287)||(41922977-41923029)
chr3 (172-284)||(44177012-44177125)
chr3 (172-284)||(44183693-44183806)
chr3 (228-281)||(47410924-47410977)
chr3 (228-281)||(47411060-47411113)
chr3 (216-284)||(20037602-20037670)
chr3 (213-277)||(42097316-42097380)
chr3 (213-245)||(51103245-51103277)
chr3 (233-284)||(36637167-36637218)
chr3 (229-284)||(50585749-50585804)
chr3 (213-284)||(51103401-51103471)
chr3 (203-273)||(21585844-21585914)
chr3 (234-284)||(25441594-25441644)
chr3 (203-277)||(26838556-26838630)
chr3 (234-284)||(38373901-38373950)
chr3 (234-284)||(46530243-46530293)
chr3 (234-284)||(49428591-49428641)
chr3 (172-284)||(3806619-3806732)
chr3 (203-284)||(7534030-7534111)
chr3 (254-287)||(8231687-8231720)
chr3 (249-282)||(22934575-22934608)
chr3 (251-284)||(26495133-26495166)
chr3 (212-273)||(34666972-34667033)
chr3 (234-283)||(35258877-35258926)
chr3 (172-284)||(37980248-37980361)
chr3 (204-268)||(10282368-10282432)
chr3 (203-267)||(17035216-17035280)
chr3 (172-224)||(21301822-21301874)
chr3 (228-284)||(36643590-36643646)
[»] chr1 (35 HSPs)
chr1 (230-284)||(35632987-35633041)
chr1 (199-284)||(4968703-4968788)
chr1 (168-281)||(42561653-42561766)
chr1 (203-277)||(40780787-40780861)
chr1 (213-282)||(10428263-10428332)
chr1 (214-283)||(14487086-14487155)
chr1 (209-262)||(26768194-26768247)
chr1 (175-292)||(27506509-27506626)
chr1 (229-285)||(11067095-11067151)
chr1 (228-284)||(15881346-15881402)
chr1 (188-284)||(42560960-42561056)
chr1 (213-284)||(46738117-46738189)
chr1 (232-285)||(36564079-36564132)
chr1 (239-284)||(42470408-42470453)
chr1 (229-285)||(10427493-10427549)
chr1 (236-284)||(44717366-44717414)
chr1 (236-284)||(49840486-49840534)
chr1 (218-284)||(10448148-10448215)
chr1 (189-284)||(11080133-11080228)
chr1 (8-66)||(12864308-12864367)
chr1 (205-284)||(35056199-35056278)
chr1 (213-279)||(6294677-6294743)
chr1 (234-284)||(33129428-33129478)
chr1 (8-66)||(34515241-34515299)
chr1 (8-66)||(36389569-36389627)
chr1 (214-280)||(36528944-36529010)
chr1 (228-282)||(39729402-39729456)
chr1 (231-281)||(42825193-42825243)
chr1 (228-282)||(49222638-49222692)
chr1 (209-286)||(25788695-25788772)
chr1 (203-284)||(38340089-38340170)
chr1 (228-284)||(4790240-4790296)
chr1 (228-284)||(21966246-21966302)
chr1 (182-282)||(38339842-38339942)
chr1 (212-280)||(50942370-50942438)
[»] chr6 (28 HSPs)
chr6 (176-280)||(20469581-20469685)
chr6 (187-284)||(4119125-4119222)
chr6 (228-284)||(8866872-8866928)
chr6 (173-285)||(34672594-34672706)
chr6 (228-283)||(8872564-8872619)
chr6 (203-281)||(33803894-33803973)
chr6 (182-284)||(8478930-8479032)
chr6 (199-284)||(32279619-32279704)
chr6 (229-284)||(22793689-22793744)
chr6 (203-285)||(3533205-3533286)
chr6 (173-275)||(11734171-11734273)
chr6 (254-292)||(23649888-23649926)
chr6 (229-273)||(32938876-32938920)
chr6 (228-284)||(32939274-32939330)
chr6 (202-284)||(10129704-10129787)
chr6 (178-285)||(31383393-31383499)
chr6 (234-284)||(4920803-4920853)
chr6 (228-282)||(5414759-5414813)
chr6 (234-284)||(17321894-17321944)
chr6 (214-284)||(32799459-32799529)
chr6 (212-273)||(2536569-2536630)
chr6 (203-284)||(7980484-7980565)
chr6 (172-284)||(13846493-13846606)
chr6 (239-284)||(14356677-14356722)
chr6 (255-292)||(16436914-16436951)
chr6 (239-284)||(32937782-32937827)
chr6 (214-285)||(13704040-13704112)
chr6 (203-279)||(14224571-14224647)
[»] chr4 (43 HSPs)
chr4 (202-284)||(47393532-47393614)
chr4 (213-282)||(6028628-6028697)
chr4 (200-284)||(3092357-3092441)
chr4 (213-285)||(24670081-24670153)
chr4 (203-283)||(47044843-47044923)
chr4 (177-284)||(10214329-10214435)
chr4 (211-292)||(24610612-24610690)
chr4 (213-284)||(55109867-55109938)
chr4 (238-292)||(1237529-1237583)
chr4 (176-285)||(32820037-32820146)
chr4 (203-284)||(46058383-46058464)
chr4 (203-284)||(48458024-48458105)
chr4 (233-292)||(44857455-44857514)
chr4 (229-284)||(56084800-56084855)
chr4 (203-273)||(6484712-6484782)
chr4 (234-284)||(20004783-20004833)
chr4 (189-283)||(27746684-27746778)
chr4 (199-284)||(28704036-28704122)
chr4 (203-283)||(4815870-4815951)
chr4 (244-285)||(8897412-8897453)
chr4 (213-262)||(12294314-12294363)
chr4 (172-284)||(23315858-23315971)
chr4 (215-284)||(48171785-48171854)
chr4 (169-245)||(32639961-32640037)
chr4 (210-284)||(22160347-22160422)
chr4 (213-284)||(26067243-26067313)
chr4 (213-284)||(26492362-26492433)
chr4 (213-284)||(28715411-28715482)
chr4 (228-282)||(10582090-10582144)
chr4 (234-284)||(19554822-19554872)
chr4 (254-284)||(26108865-26108895)
chr4 (219-284)||(32204184-32204247)
chr4 (213-284)||(33389904-33389979)
chr4 (199-281)||(39678076-39678158)
chr4 (8-66)||(52437550-52437608)
chr4 (177-285)||(4505760-4505866)
chr4 (203-284)||(46250893-46250974)
chr4 (247-284)||(47683473-47683510)
chr4 (228-268)||(14065296-14065336)
chr4 (248-284)||(26509624-26509660)
chr4 (256-284)||(31444965-31444993)
chr4 (209-261)||(33144186-33144238)
chr4 (213-257)||(44277356-44277400)
[»] scaffold1017 (1 HSPs)
scaffold1017 (203-284)||(2047-2128)
[»] scaffold0003 (1 HSPs)
scaffold0003 (199-284)||(226399-226483)
[»] scaffold0025 (1 HSPs)
scaffold0025 (228-284)||(11678-11734)
[»] scaffold1777 (1 HSPs)
scaffold1777 (238-284)||(595-641)
[»] scaffold0636 (1 HSPs)
scaffold0636 (185-279)||(3335-3429)
[»] scaffold0013 (1 HSPs)
scaffold0013 (218-284)||(101112-101178)
[»] scaffold0035 (1 HSPs)
scaffold0035 (172-284)||(81778-81891)
[»] scaffold0018 (1 HSPs)
scaffold0018 (239-284)||(36811-36856)
[»] scaffold1793 (1 HSPs)
scaffold1793 (247-282)||(573-608)
[»] scaffold0002 (1 HSPs)
scaffold0002 (8-66)||(452478-452537)
[»] scaffold0009 (1 HSPs)
scaffold0009 (189-284)||(53670-53762)


Alignment Details
Target: chr5 (Bit Score: 178; Significance: 7e-96; HSPs: 49)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 178; E-Value: 7e-96
Query Start/End: Original strand, 165 - 365
Target Start/End: Original strand, 6252386 - 6252589
Alignment:
Q  165 gtgaataagagatttttggctgaatttttcatttttctaattacacctttaaacaaatttgcatataa---gaatgttatattgatggtgttattaaaaa 261  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||   |||||||||||||||| |||||| |||||    
T  6252386 gtgaataagggatttttggctgaatttttcatttttctaattacacctttaaacaaatttgcatataattagaatgttatattgatgctgttataaaaaa 6252485  T
Q  262 atataagaatttatattatattttctttattttggaaataataaattcatagcttgttacaattagaaagttacaaacatgtataactttaattttaatc 361  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6252486 atataagaatttatattatattttctttattttggaaataataaattcatagcttgttacaattagaaagttacaaacatgtataactttaattttaatc 6252585  T
Q  362 aaat 365  Q
    ||||    
T  6252586 aaat 6252589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 6252235 - 6252309
Alignment:
Q  1 aggtatatatttaaccactttatagttacaacttgctaaaatactcctttgaaaaaatgagtgggtctacgttag 75  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  6252235 aggtatatatttaaccactttatagttacaacttgctaaaatactcctttgaaaaaacgagtgggtctacgttag 6252309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 228 - 284
Target Start/End: Complemental strand, 42522778 - 42522722
Alignment:
Q  228 tataagaatgttatattgatggtgttattaaaaaatataagaatttatattatattt 284  Q
    ||||| |||||||||||| ||||||||||||||||||||||||||| ||||||||||    
T  42522778 tataataatgttatattgttggtgttattaaaaaatataagaatttttattatattt 42522722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 213 - 280
Target Start/End: Original strand, 40483058 - 40483125
Alignment:
Q  213 ttaaacaaatttgcatataagaatgttatattgatggtgttattaaaaaatataagaatttatattat 280  Q
    |||||||||||||| |||||||||  |||||||||||||| ||| || ||||||||||||||||||||    
T  40483058 ttaaacaaatttgcctataagaatactatattgatggtgtcattcaacaatataagaatttatattat 40483125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 230 - 283
Target Start/End: Original strand, 14725289 - 14725342
Alignment:
Q  230 taagaatgttatattgatggtgttattaaaaaatataagaatttatattatatt 283  Q
    |||||||||||||||| |||||||||| |||||||||||||||| |||||||||    
T  14725289 taagaatgttatattgctggtgttattgaaaaatataagaatttttattatatt 14725342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 213 - 284
Target Start/End: Original strand, 27598335 - 27598406
Alignment:
Q  213 ttaaacaaatttgcatataagaatgttatattgatggtgttattaaaaaatataagaatttatattatattt 284  Q
    |||||||||||| | ||||| | |||||||||| |||| |||||||||||||||||||||| |||| |||||    
T  27598335 ttaaacaaattttcttataatagtgttatattgttggtattattaaaaaatataagaatttttattttattt 27598406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 203 - 282
Target Start/End: Original strand, 35695243 - 35695322
Alignment:
Q  203 aattacacctttaaacaaatttgcatataagaatgttatattgatggtgttattaaaaaatataagaatttatattatat 282  Q
    ||||| ||| ||||||||||||||||||||||||| ||||||| |||||  ||| ||||| |||  ||||||||||||||    
T  35695243 aattatacccttaaacaaatttgcatataagaatgctatattgctggtgccattcaaaaagatataaatttatattatat 35695322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 234 - 284
Target Start/End: Original strand, 835634 - 835684
Alignment:
Q  234 aatgttatattgatggtgttattaaaaaatataagaatttatattatattt 284  Q
    |||||||||| | ||||||||||||||||||||| ||||||||||||||||    
T  835634 aatgttatatcgttggtgttattaaaaaatataataatttatattatattt 835684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 234 - 284
Target Start/End: Complemental strand, 40693354 - 40693304
Alignment:
Q  234 aatgttatattgatggtgttattaaaaaatataagaatttatattatattt 284  Q
    ||||||||  || ||||||||||||||||||||||||||||||||||||||    
T  40693354 aatgttattatgttggtgttattaaaaaatataagaatttatattatattt 40693304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 216 - 285
Target Start/End: Complemental strand, 11487303 - 11487234
Alignment:
Q  216 aacaaatttgcatataagaatgttatattgatggtgttattaaaaaatataagaatttatattatatttt 285  Q
    ||||||||| | ||||| |||||||||||| | || |||||||||||||| ||||||| |||||||||||    
T  11487303 aacaaattttcctataaaaatgttatattgttcgtattattaaaaaatatcagaatttttattatatttt 11487234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 234 - 283
Target Start/End: Complemental strand, 14861898 - 14861849
Alignment:
Q  234 aatgttatattgatggtgttattaaaaaatataagaatttatattatatt 283  Q
    |||||||||||| |||||| ||||||||||||||||||| ||||||||||    
T  14861898 aatgttatattgttggtgtcattaaaaaatataagaattaatattatatt 14861849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 175 - 284
Target Start/End: Original strand, 27175125 - 27175234
Alignment:
Q  175 gatttttggctgaatttttcatttttctaattacacctttaaacaaatttgcatataagaatgttatattgatggtgttattaaaaaatataagaattta 274  Q
    |||||| ||||| ||||||  || ||| ||||| ||| ||||||||  ||   ||||| |||||||||||| |||||||||||||||| ||||||||||     
T  27175125 gattttgggctggattttttgttattccaattataccattaaacaatgttttctataataatgttatattgttggtgttattaaaaaagataagaatttt 27175224  T
Q  275 tattatattt 284  Q
    | ||||||||    
T  27175225 tgttatattt 27175234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 168 - 284
Target Start/End: Complemental strand, 3955965 - 3955849
Alignment:
Q  168 aataagagatttttggctgaatttttcatttttctaattacacctttaaacaaatttgcatataagaatgttatattgatggtgttattaaaaaatataa 267  Q
    ||||||||||||| || || |||||||||| ||| ||||  ||||||||||||||||   | ||| |||| ||||||| || |||  || |||| |||||    
T  3955965 aataagagattttgggttggatttttcattattccaattgtacctttaaacaaatttttctttaataatgatatattgttgatgtcgttgaaaactataa 3955866  T
Q  268 gaatttatattatattt 284  Q
    || ||||||||||||||    
T  3955865 gagtttatattatattt 3955849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 212 - 284
Target Start/End: Original strand, 39850393 - 39850465
Alignment:
Q  212 tttaaacaaatttgcatataagaatgttatattgatggtgttattaaaaaatataagaatttatattatattt 284  Q
    ||||||||||||||  ||||| |||||||||||| |   |||||||||||  |||||||||||||||||||||    
T  39850393 tttaaacaaatttgtctataataatgttatattgttaaagttattaaaaatgataagaatttatattatattt 39850465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 213 - 284
Target Start/End: Complemental strand, 13998697 - 13998626
Alignment:
Q  213 ttaaacaaatttgcatataagaatgttatattgatggtgttattaaaaaatataagaatttatattatattt 284  Q
    |||||||||||| ||||||| | |||||||||| |||||||||||||| | |||| ||||| | ||||||||    
T  13998697 ttaaacaaattttcatataatagtgttatattgttggtgttattaaaatagataataatttttgttatattt 13998626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 177 - 284
Target Start/End: Original strand, 19840291 - 19840398
Alignment:
Q  177 tttttggctgaatttttcatttttctaattacacctttaaacaaatttgcatataagaatgttatattgatggtgttattaaaaaatataagaatttata 276  Q
    |||| |||||||||| || || || || ||| ||| ||||| ||| |||| | |||||||| || |||| | |||||||||||||| |||||||||| ||    
T  19840291 ttttgggctgaatttctctttattttagttatacccttaaataaacttgcttttaagaatgatacattgtttgtgttattaaaaaagataagaattttta 19840390  T
Q  277 ttatattt 284  Q
    ||||||||    
T  19840391 ttatattt 19840398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 189 - 284
Target Start/End: Complemental strand, 43530629 - 43530534
Alignment:
Q  189 tttttcatttttctaattacacctttaaacaaatttgcatataagaatgttatattgatggtgttattaaaaaatataagaatttatattatattt 284  Q
    ||||||||| ||| ||||| ||| || |||||||| || |||||||||||||||||| |||  | ||| ||||| || |||||||||||| |||||    
T  43530629 tttttcattcttccaattatacccttcaacaaattggcctataagaatgttatattgttgggatcattgaaaaagatgagaatttatattttattt 43530534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 203 - 292
Target Start/End: Complemental strand, 28727987 - 28727900
Alignment:
Q  203 aattacacctttaaacaaatttgcatataagaatgttatattgatggtgttattaaaaaatataagaatttatattatattttctttatt 292  Q
    ||||| ||| ||||||||||||||  | ||||||||||||||| |||||| ||| ||||| |||||  | |||||||||||| |||||||    
T  28727987 aattatacccttaaacaaatttgccaaaaagaatgttatattgttggtgtcattgaaaaacataag--tgtatattatatttactttatt 28727900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 213 - 278
Target Start/End: Complemental strand, 3945249 - 3945184
Alignment:
Q  213 ttaaacaaatttgcatataagaatgttatattgatggtgttattaaaaaatataagaatttatatt 278  Q
    |||||||||||||  ||||| |||||||| |||  ||||| ||||||||||||||||| |||||||    
T  3945249 ttaaacaaatttgactataacaatgttattttgtaggtgtcattaaaaaatataagaacttatatt 3945184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 199 - 284
Target Start/End: Complemental strand, 39178220 - 39178135
Alignment:
Q  199 ttctaattacacctttaaacaaatttgcatataagaatgttatattgatggtgttattaaaaaatataagaatttatattatattt 284  Q
    ||||||||| ||| ||||| |||||| | ||||| |||||||||||| || ||||||||||| | |||| ||||| | ||||||||    
T  39178220 ttctaattatacccttaaataaattttcctataataatgttatattgttgatgttattaaaatagataataatttttgttatattt 39178135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 228 - 273
Target Start/End: Original strand, 39585056 - 39585101
Alignment:
Q  228 tataagaatgttatattgatggtgttattaaaaaatataagaattt 273  Q
    ||||| ||||||||||||||||||||||||||||| || |||||||    
T  39585056 tataataatgttatattgatggtgttattaaaaaagatgagaattt 39585101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 172 - 284
Target Start/End: Complemental strand, 41879910 - 41879797
Alignment:
Q  172 agagatttttggctgaatttttcatttttctaattacacctttaaacaaatttgcatataagaatgttatattgatggtgttattaaaaaat-ataagaa 270  Q
    ||||| ||| |||||||||||| ||  ||  ||||| ||| |||||||||||| | ||||  ||||||| |||  ||||| ||||||||||  |||||||    
T  41879910 agagactttgggctgaattttttataatttcaattatacccttaaacaaattttcctatattaatgttacattcttggtggtattaaaaaaagataagaa 41879811  T
Q  271 tttatattatattt 284  Q
    ||||||||||||||    
T  41879810 tttatattatattt 41879797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 202 - 262
Target Start/End: Original strand, 31202017 - 31202077
Alignment:
Q  202 taattacacctttaaacaaatttgcatataagaatgttatattgatggtgttattaaaaaa 262  Q
    |||||| ||| |||||||||||| | ||||| |||||||||| | ||||||||||||||||    
T  31202017 taattatacccttaaacaaattttcttataacaatgttatatcgttggtgttattaaaaaa 31202077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 8 - 66
Target Start/End: Complemental strand, 1951604 - 1951545
Alignment:
Q  8 tatttaaccactttatagttaca-acttgctaaaatactcctttgaaaaaatgagtgggt 66  Q
    |||||||||||||| ||||||   |||||||||||||||||||| ||||||| |||||||    
T  1951604 tatttaaccactttttagttattcacttgctaaaatactccttttaaaaaataagtgggt 1951545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 237 - 292
Target Start/End: Original strand, 3165635 - 3165690
Alignment:
Q  237 gttatattgatggtgttattaaaaaatataagaatttatattatattttctttatt 292  Q
    |||||| || ||||||||||||||||||||| |||| || ||||||||||| ||||    
T  3165635 gttatagtgttggtgttattaaaaaatataaaaattcatgttatattttctatatt 3165690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 213 - 284
Target Start/End: Complemental strand, 11487596 - 11487526
Alignment:
Q  213 ttaaacaaatttgcatataagaatgttatattgatggtgttattaaaaaatataagaatttatattatattt 284  Q
    |||||||||||| | ||||| |||||||||||  ||| ||||||| |||| |||||||||| ||||||||||    
T  11487596 ttaaacaaattttcctataataatgttatattattggcgttatta-aaaagataagaatttttattatattt 11487526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 229 - 284
Target Start/End: Complemental strand, 14001180 - 14001125
Alignment:
Q  229 ataagaatgttatattgatggtgttattaaaaaatataagaatttatattatattt 284  Q
    ||||||||||||| ||| || ||| ||| ||||| |||||||||||||||||||||    
T  14001180 ataagaatgttattttgttgatgtcattcaaaaagataagaatttatattatattt 14001125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 209 - 284
Target Start/End: Complemental strand, 18282346 - 18282271
Alignment:
Q  209 acctttaaacaaatttgcatataagaatgttatattgatggtgttattaaaaaatataagaatttatattatattt 284  Q
    |||||||||||||||||  ||||||||| |||| ||| |||||| ||| ||||| |||| ||||| |||| |||||    
T  18282346 acctttaaacaaatttgactataagaatattattttgttggtgtcattcaaaaagataaaaatttgtattctattt 18282271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 213 - 285
Target Start/End: Original strand, 28040231 - 28040305
Alignment:
Q  213 ttaaacaaatttgcatataagaatgttatattgatggtgttattaaaaaat--ataagaatttatattatatttt 285  Q
    |||||||||||| |  ||||||||||||||||| ||| || ||| ||||||  |||| |||||||||||||||||    
T  28040231 ttaaacaaattttctcataagaatgttatattgttggcgtcattcaaaaataaataaaaatttatattatatttt 28040305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 213 - 284
Target Start/End: Complemental strand, 29686300 - 29686229
Alignment:
Q  213 ttaaacaaatttgcatataagaatgttatattgatggtgttattaaaaaatataagaatttatattatattt 284  Q
    ||||||||||||   |||||||||||||  ||  |||||| ||| ||||| |||||||||||||||||||||    
T  29686300 ttaaacaaattttactataagaatgttaatttattggtgtcattcaaaaagataagaatttatattatattt 29686229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 240 - 282
Target Start/End: Original strand, 11832445 - 11832487
Alignment:
Q  240 atattgatggtgttattaaaaaatataagaatttatattatat 282  Q
    |||||| |||||| ||||||||| |||||||||||||||||||    
T  11832445 atattgttggtgtcattaaaaaagataagaatttatattatat 11832487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 8 - 66
Target Start/End: Original strand, 14369779 - 14369837
Alignment:
Q  8 tatttaaccactttatagttacaacttgctaaaatactcctttgaaaaaatgagtgggt 66  Q
    |||||||| ||||| |||||| |||||||||||| || ||||| ||||||| |||||||    
T  14369779 tatttaactactttttagttataacttgctaaaacacaccttttaaaaaataagtgggt 14369837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 234 - 284
Target Start/End: Complemental strand, 16321077 - 16321027
Alignment:
Q  234 aatgttatattgatggtgttattaaaaaatataagaatttatattatattt 284  Q
    |||||||||||| |||||| ||| ||||||||||||| ||||||| |||||    
T  16321077 aatgttatattgttggtgtcattgaaaaatataagaaattatattgtattt 16321027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 214 - 284
Target Start/End: Original strand, 29663396 - 29663466
Alignment:
Q  214 taaacaaatttgcatataagaatgttatattgatggtgttattaaaaaatataagaatttatattatattt 284  Q
    ||||||||||||  |||||||||| ||||||  || ||| ||||||||| || | ||||||||||||||||    
T  29663396 taaacaaatttgtgtataagaatgctatattattgctgtcattaaaaaagattataatttatattatattt 29663466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 232 - 281
Target Start/End: Complemental strand, 42170114 - 42170064
Alignment:
Q  232 agaatgttatattgatggtgttattaa-aaaatataagaatttatattata 281  Q
    ||||||||||||| ||||| ||||||| |||| ||||||||||||||||||    
T  42170114 agaatgttatatttatggtattattaaaaaaaaataagaatttatattata 42170064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 231 - 284
Target Start/End: Original strand, 833873 - 833926
Alignment:
Q  231 aagaatgttatattgatggtgttattaaaaaatataagaatttatattatattt 284  Q
    |||| |||||||||| |||||| ||| ||||| ||||||||||| |||||||||    
T  833873 aagattgttatattgttggtgtcattcaaaaagataagaatttagattatattt 833926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 203 - 284
Target Start/End: Original strand, 4460475 - 4460556
Alignment:
Q  203 aattacacctttaaacaaatttgcatataagaatgttatattgatggtgttattaaaaaatataagaatttatattatattt 284  Q
    ||||| ||| ||||||||| || | ||||| |||| ||||||| |||| | ||| ||||| ||||||| |||||||||||||    
T  4460475 aattatacccttaaacaaaattacctataaaaatgctatattgttggtatcattcaaaaagataagaaattatattatattt 4460556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 231 - 284
Target Start/End: Complemental strand, 23085398 - 23085345
Alignment:
Q  231 aagaatgttatattgatggtgttattaaaaaatataagaatttatattatattt 284  Q
    ||||||||||| ||| |||||| | | ||||| |||||||||||||||||||||    
T  23085398 aagaatgttattttgttggtgtcagttaaaaaaataagaatttatattatattt 23085345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 172 - 284
Target Start/End: Complemental strand, 27263943 - 27263830
Alignment:
Q  172 agagatttttggctgaatttttcatttttctaattacacctttaaacaaatttgcatataagaatgttatattgatggtgttatt-aaaaaatataagaa 270  Q
    ||||| ||| |||||||||||| ||  ||  ||||| ||| |||||||||||| | ||||  ||||||| |||  ||||| |||| |||||| |||||||    
T  27263943 agagactttgggctgaattttttataatttcaattatacccttaaacaaattttcctatattaatgttacattcttggtggtattaaaaaaagataagaa 27263844  T
Q  271 tttatattatattt 284  Q
    ||| ||||||||||    
T  27263843 tttgtattatattt 27263830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 172 - 284
Target Start/End: Complemental strand, 28394771 - 28394658
Alignment:
Q  172 agagatttttggctgaatttttcatttttctaattacacctttaaacaaatttgcatataagaatgttatattgatggtgttatt-aaaaaatataagaa 270  Q
    ||||| ||| |||||||||||| ||  ||  ||||| ||| |||||||||||| | ||||  ||||||| |||  ||||| |||| |||||| |||||||    
T  28394771 agagactttgggctgaattttttataatttcaattatacccttaaacaaattttcctatattaatgttacattcttggtggtattaaaaaaagataagaa 28394672  T
Q  271 tttatattatattt 284  Q
    ||| ||||||||||    
T  28394671 tttgtattatattt 28394658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 247 - 284
Target Start/End: Complemental strand, 37516930 - 37516893
Alignment:
Q  247 tggtgttattaaaaaatataagaatttatattatattt 284  Q
    |||||| ||| |||||||||||||||||||||||||||    
T  37516930 tggtgtcattcaaaaatataagaatttatattatattt 37516893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 228 - 284
Target Start/End: Complemental strand, 14205380 - 14205324
Alignment:
Q  228 tataagaatgttatattgatggtgttattaaaaaatataagaatttatattatattt 284  Q
    |||||||||  ||||||  |||||| ||| ||||| |||||||||||||||||||||    
T  14205380 tataagaatactatatttttggtgtcatttaaaaagataagaatttatattatattt 14205324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 252 - 284
Target Start/End: Original strand, 14930730 - 14930762
Alignment:
Q  252 ttattaaaaaatataagaatttatattatattt 284  Q
    |||||||||||||||||||||| ||||||||||    
T  14930730 ttattaaaaaatataagaatttgtattatattt 14930762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 213 - 273
Target Start/End: Original strand, 17704300 - 17704360
Alignment:
Q  213 ttaaacaaatttgcatataagaatgttatattgatggtgttattaaaaaatataagaattt 273  Q
    ||||||||||||   ||||| |||||||||||  || ||||||||||||| ||||||||||    
T  17704300 ttaaacaaattttactataacaatgttatattattgatgttattaaaaaagataagaattt 17704360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 256 - 284
Target Start/End: Complemental strand, 32654067 - 32654039
Alignment:
Q  256 taaaaaatataagaatttatattatattt 284  Q
    |||||||||||||||||||||||||||||    
T  32654067 taaaaaatataagaatttatattatattt 32654039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 249 - 285
Target Start/End: Complemental strand, 35627281 - 35627245
Alignment:
Q  249 gtgttattaaaaaatataagaatttatattatatttt 285  Q
    |||| ||||||||| ||||||||||||||||||||||    
T  35627281 gtgtcattaaaaaaaataagaatttatattatatttt 35627245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 252 - 280
Target Start/End: Original strand, 36629689 - 36629717
Alignment:
Q  252 ttattaaaaaatataagaatttatattat 280  Q
    |||||||||||||||||||||||||||||    
T  36629689 ttattaaaaaatataagaatttatattat 36629717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 6 - 66
Target Start/End: Complemental strand, 39549012 - 39548952
Alignment:
Q  6 tatatttaaccactttatagttacaacttgctaaaatactcctttgaaaaaatgagtgggt 66  Q
    |||||||||| ||||| |||||| |||||||||||| || ||||  ||||||| |||||||    
T  39549012 tatatttaactactttttagttataacttgctaaaacacaccttctaaaaaataagtgggt 39548952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 230 - 278
Target Start/End: Complemental strand, 41863374 - 41863326
Alignment:
Q  230 taagaatgttatattgatggtgttattaaaaaatataagaatttatatt 278  Q
    |||||||| ||| ||| |||||| ||||||||| |||||||||||||||    
T  41863374 taagaatgctattttgttggtgtcattaaaaaagataagaatttatatt 41863326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 54; Significance: 7e-22; HSPs: 36)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 175 - 280
Target Start/End: Original strand, 23914731 - 23914836
Alignment:
Q  175 gatttttggctgaatttttcatttttctaattacacctttaaacaaatttgcatataagaatgttatattgatggtgttattaaaaaatataagaattta 274  Q
    |||||| | ||| |||||||||| ||| ||||| ||  |||||||||||||| |||||||||||||||||| ||||  |||| |||||||||||||||||    
T  23914731 gattttggactggatttttcattattccaattatactcttaaacaaatttgcctataagaatgttatattgttggtaatattgaaaaatataagaattta 23914830  T
Q  275 tattat 280  Q
    ||||||    
T  23914831 tattat 23914836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 190 - 284
Target Start/End: Original strand, 23914547 - 23914641
Alignment:
Q  190 ttttcatttttctaattacacctttaaacaaatttgcatataagaatgttatattgatggtgttattaaaaaatataagaatttatattatattt 284  Q
    |||||||| | | ||||| ||| |||||||||||||  |||||||||||||||||| | |||||||| ||||| |||||||||||||||||||||    
T  23914547 ttttcattatgcaaattatacccttaaacaaatttggctataagaatgttatattgtttgtgttattgaaaaagataagaatttatattatattt 23914641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 212 - 284
Target Start/End: Original strand, 35468717 - 35468789
Alignment:
Q  212 tttaaacaaatttgcatataagaatgttatattgatggtgttattaaaaaatataagaatttatattatattt 284  Q
    ||||| ||||||||  |||||||||||||| ||| |||||| | |||||||||||||||||||||||||||||    
T  35468717 tttaagcaaatttgactataagaatgttattttgttggtgtcaataaaaaatataagaatttatattatattt 35468789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 213 - 284
Target Start/End: Complemental strand, 744982 - 744911
Alignment:
Q  213 ttaaacaaatttgcatataagaatgttatattgatggtgttattaaaaaatataagaatttatattatattt 284  Q
    ||||| |||||||  |||||||||||||||||| |||||||||| ||||| |||| ||||||||||||||||    
T  744982 ttaaataaatttgtctataagaatgttatattgttggtgttatttaaaaagataaaaatttatattatattt 744911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 234 - 284
Target Start/End: Complemental strand, 30675594 - 30675544
Alignment:
Q  234 aatgttatattgatggtgttattaaaaaatataagaatttatattatattt 284  Q
    |||||||||||| ||||||||||||||||||||||| ||||||||||||||    
T  30675594 aatgttatattgttggtgttattaaaaaatataagagtttatattatattt 30675544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 203 - 280
Target Start/End: Complemental strand, 21384740 - 21384663
Alignment:
Q  203 aattacacctttaaacaaatttgcatataagaatgttatattgatggtgttattaaaaaatataagaatttatattat 280  Q
    ||||| ||| |||||||| ||| ||||||| |||| ||||||| ||||||| ||||||||||||||||||| ||||||    
T  21384740 aattatacccttaaacaatttttcatataataatgctatattgttggtgtttttaaaaaatataagaatttttattat 21384663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 175 - 283
Target Start/End: Original strand, 13277888 - 13277995
Alignment:
Q  175 gatttttggctgaatttttcatttttctaattacacctttaaacaaatttgcatataagaatgttatattgatggtgttattaaaaaatataagaattta 274  Q
    |||||| |||||||||||||||| ||  ||||| | | ||||| |||||||| ||||| |||||||||||| | ||||||||  |||| |||| ||||||    
T  13277888 gattttgggctgaatttttcattatttcaattatatccttaaataaatttgcctataacaatgttatattgttagtgttatt-gaaaagataataattta 13277986  T
Q  275 tattatatt 283  Q
    |||||||||    
T  13277987 tattatatt 13277995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 203 - 280
Target Start/End: Complemental strand, 41860365 - 41860288
Alignment:
Q  203 aattacacctttaaacaaatttgcatataagaatgttatattgatggtgttattaaaaaatataagaatttatattat 280  Q
    ||||| ||||||| | ||||||||||||||||||| ||||||| || |||  || ||||| |||||||||||||||||    
T  41860365 aattatacctttatataaatttgcatataagaatgctatattgttgatgtcctttaaaaagataagaatttatattat 41860288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 209 - 284
Target Start/End: Original strand, 6674931 - 6675006
Alignment:
Q  209 acctttaaacaaatttgcatataagaatgttatattgatggtgttattaaaaaatataagaatttatattatattt 284  Q
    ||||||||| ||| |||| ||||||| |||| ||||| || |  |||| |||||||||||||||||||||||||||    
T  6674931 acctttaaagaaagttgcctataagagtgttgtattgttgattgtattgaaaaatataagaatttatattatattt 6675006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 173 - 284
Target Start/End: Complemental strand, 26966518 - 26966407
Alignment:
Q  173 gagatttttggctgaatttttcatttttctaattacacctttaaacaaatttgcatataagaatgttatattgatggtgttattaaaaaatataagaatt 272  Q
    |||||||||| |||||||||| ||  ||| ||||| ||| |||||||||      ||||  |||||||||||| ||||| |||||||||  |||||||||    
T  26966518 gagatttttgactgaattttttataattccaattatacccttaaacaaaaaaatttatattaatgttatattgttggtgatattaaaaatgataagaatt 26966419  T
Q  273 tatattatattt 284  Q
    ||||||||||||    
T  26966418 tatattatattt 26966407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 234 - 284
Target Start/End: Complemental strand, 34119008 - 34118958
Alignment:
Q  234 aatgttatattgatggtgttattaaaaaatataagaatttatattatattt 284  Q
    |||||||||||| | ||| |||||||||||||||| |||||||||||||||    
T  34119008 aatgttatattgttagtggtattaaaaaatataaggatttatattatattt 34118958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 172 - 284
Target Start/End: Original strand, 352320 - 352433
Alignment:
Q  172 agagatttttggctgaatttttcatttttctaattacacctttaaac-aaatttgcatataagaatgttatattgatggtgttattaaaaaatataagaa 270  Q
    ||||||||| |||| ||||||| ||  ||| ||||| ||| |||||  |||||| | ||||  |||||||||||| ||||| |||| ||||| ||||| |    
T  352320 agagattttgggctaaattttttataattccaattatacccttaaaataaattttcctatattaatgttatattgttggtggtattgaaaaagataagga 352419  T
Q  271 tttatattatattt 284  Q
    ||||||||||||||    
T  352420 tttatattatattt 352433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 203 - 284
Target Start/End: Complemental strand, 14690188 - 14690108
Alignment:
Q  203 aattacacctttaaacaaatttgcatataagaatgttatattgatggtgttattaaaaaatataagaatttatattatattt 284  Q
    ||||| ||| ||||||| |||| | ||||| |||||||||||| |||||||||||||||| | |||| ||| ||||||||||    
T  14690188 aattatacccttaaacatattttcctataataatgttatattgttggtgttattaaaaaa-aaaagattttttattatattt 14690108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 228 - 284
Target Start/End: Original strand, 10886557 - 10886613
Alignment:
Q  228 tataagaatgttatattgatggtgttattaaaaaatataagaatttatattatattt 284  Q
    ||||| |||||||||||| || ||||||||||||| |||||||||| |||| |||||    
T  10886557 tataataatgttatattgttgatgttattaaaaaagataagaatttttattttattt 10886613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 228 - 284
Target Start/End: Original strand, 11538383 - 11538439
Alignment:
Q  228 tataagaatgttatattgatggtgttattaaaaaatataagaatttatattatattt 284  Q
    ||||| ||||| |||||| |||||||||||||||| |||||||||| | ||||||||    
T  11538383 tataataatgtcatattgttggtgttattaaaaaagataagaatttttgttatattt 11538439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 167 - 267
Target Start/End: Original strand, 16568210 - 16568310
Alignment:
Q  167 gaataagagatttttggctgaatttttcatttttctaattacacctttaaacaaatttgcatataagaatgttatattgatggtgttattaaaaaatata 266  Q
    ||||| |||||||| ||  || ||||| ||| || |||||| ||||||||| ||||||   ||||  |||||||||||| || |||||||||||||||||    
T  16568210 gaatatgagattttagggagatttttttattattttaattatacctttaaataaatttttctatactaatgttatattgttgatgttattaaaaaatata 16568309  T
Q  267 a 267  Q
    |    
T  16568310 a 16568310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 229 - 284
Target Start/End: Complemental strand, 11694273 - 11694218
Alignment:
Q  229 ataagaatgttatattgatggtgttattaaaaaatataagaatttatattatattt 284  Q
    ||||||||| ||| ||| |||||| ||| |||||||||| ||||||||||||||||    
T  11694273 ataagaatgctattttgttggtgtcattcaaaaatataaaaatttatattatattt 11694218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 213 - 284
Target Start/End: Complemental strand, 21501258 - 21501188
Alignment:
Q  213 ttaaacaaatttgcatataagaatgttatattgatggtgttattaaaaaatataagaatttatattatattt 284  Q
    |||||||||||| | ||||  |||||| ||||||||||| |||| ||||||||||  |||||||||||||||    
T  21501258 ttaaacaaattttcctatataaatgttttattgatggtggtatt-aaaaatataatgatttatattatattt 21501188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 250 - 284
Target Start/End: Complemental strand, 9546165 - 9546131
Alignment:
Q  250 tgttattaaaaaatataagaatttatattatattt 284  Q
    ||||||| |||||||||||||||||||||||||||    
T  9546165 tgttattgaaaaatataagaatttatattatattt 9546131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 227 - 281
Target Start/End: Original strand, 12541464 - 12541518
Alignment:
Q  227 atataagaatgttatattgatggtgttattaaaaaatataagaatttatattata 281  Q
    ||||||||||||||| ||  || ||| |||||||||||||| |||||||||||||    
T  12541464 atataagaatgttattttattgatgtcattaaaaaatataataatttatattata 12541518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 250 - 284
Target Start/End: Complemental strand, 29353810 - 29353776
Alignment:
Q  250 tgttattaaaaaatataagaatttatattatattt 284  Q
    ||||||||||||||| |||||||||||||||||||    
T  29353810 tgttattaaaaaatacaagaatttatattatattt 29353776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 234 - 284
Target Start/End: Original strand, 31054297 - 31054347
Alignment:
Q  234 aatgttatattgatggtgttattaaaaaatataagaatttatattatattt 284  Q
    ||||||||||||   ||| |||||||||| |||||||||||||||||||||    
T  31054297 aatgttatattgtcagtgatattaaaaaagataagaatttatattatattt 31054347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 234 - 284
Target Start/End: Original strand, 31525272 - 31525322
Alignment:
Q  234 aatgttatattgatggtgttattaaaaaatataagaatttatattatattt 284  Q
    |||||||||||  ||||| |||||||||| ||||| |||||||||||||||    
T  31525272 aatgttatattattggtggtattaaaaaagataaggatttatattatattt 31525322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 188 - 250
Target Start/End: Complemental strand, 33838987 - 33838925
Alignment:
Q  188 atttttcatttttctaattacacctttaaacaaatttgcatataagaatgttatattgatggt 250  Q
    |||||||||| ||||||||| || ||||||||||||||  | ||||||| |||||||| ||||    
T  33838987 atttttcattcttctaattatacttttaaacaaatttgtttgtaagaatattatattgttggt 33838925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 250 - 284
Target Start/End: Original strand, 34423875 - 34423909
Alignment:
Q  250 tgttattaaaaaatataagaatttatattatattt 284  Q
    ||||||||||||| |||||||||||||||||||||    
T  34423875 tgttattaaaaaagataagaatttatattatattt 34423909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 203 - 284
Target Start/End: Complemental strand, 40324455 - 40324373
Alignment:
Q  203 aattacacctttaaacaaatttgcatataagaatgttatattgatggtgttattaaaaaa-tataagaatttatattatattt 284  Q
    ||||| ||| |||||||||||| | ||||  ||||||| |||  ||||| |||||||||| ||||||||||| ||||||||||    
T  40324455 aattatacccttaaacaaatttccctatattaatgttacattcttggtggtattaaaaaaatataagaatttgtattatattt 40324373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 228 - 285
Target Start/End: Original strand, 2001175 - 2001232
Alignment:
Q  228 tataagaatgttatattgatggtgttattaaaaaatataagaatttatattatatttt 285  Q
    ||||||||| |||||||| | |||| ||| |||||  |||||||||||||||||||||    
T  2001175 tataagaatattatattgtttgtgtcatttaaaaagttaagaatttatattatatttt 2001232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 213 - 274
Target Start/End: Original strand, 7301588 - 7301649
Alignment:
Q  213 ttaaacaaatttgcatataagaatgttatattgatggtgttattaaaaaatataagaattta 274  Q
    |||||||||||||  ||||| ||| |||||||| |||||||||| ||||| || ||||||||    
T  7301588 ttaaacaaatttgtctataaaaatattatattgttggtgttattcaaaaagattagaattta 7301649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 199 - 284
Target Start/End: Complemental strand, 8905045 - 8904960
Alignment:
Q  199 ttctaattacacctttaaacaaatttgcatataagaatgttatattgatggtgttattaaaaaatataagaatttatattatattt 284  Q
    ||||||||| || || || ||||||||  |||||||||| ||| ||| |||||| ||| || || |||||||||||||| ||||||    
T  8905045 ttctaattatactttaaatcaaatttgactataagaatgctattttgctggtgtcattcaacaagataagaatttatatcatattt 8904960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 234 - 283
Target Start/End: Complemental strand, 18175310 - 18175261
Alignment:
Q  234 aatgttatattgatggtgttattaaaaaatataagaatttatattatatt 283  Q
    |||||||||||  |||||||||||||||| |||||||||| | |||||||    
T  18175310 aatgttatattcttggtgttattaaaaaagataagaatttttgttatatt 18175261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 203 - 284
Target Start/End: Original strand, 19133856 - 19133937
Alignment:
Q  203 aattacacctttaaacaaatttgcatataagaatgttatattgatggtgttattaaaaaatataagaatttatattatattt 284  Q
    ||||| ||| |||||||||||| |  |||  ||||||||| || ||||| ||||||||||  |||| |||||||||||||||    
T  19133856 aattatacccttaaacaaattttccaatattaatgttataatgttggtggtattaaaaaaagtaaggatttatattatattt 19133937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 212 - 284
Target Start/End: Complemental strand, 3752554 - 3752482
Alignment:
Q  212 tttaaacaaatttgcatataagaatgttatattgatggtgttattaaaaaatataagaatttatattatattt 284  Q
    ||||||||||||| | |||||||||  || |||| || ||| ||| ||||| |||||||||||||||| ||||    
T  3752554 tttaaacaaattttcttataagaatactacattgttgatgtcatttaaaaagataagaatttatattacattt 3752482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 236 - 284
Target Start/End: Original strand, 9402894 - 9402942
Alignment:
Q  236 tgttatattgatggtgttattaaaaaatataagaatttatattatattt 284  Q
    |||||||||| || ||||||| |||||||||| ||| ||||||||||||    
T  9402894 tgttatattgttgttgttattgaaaaatataaaaatgtatattatattt 9402942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 228 - 284
Target Start/End: Original strand, 29241767 - 29241823
Alignment:
Q  228 tataagaatgttatattgatggtgttattaaaaaatataagaatttatattatattt 284  Q
    |||||||||| ||| ||| | |||||||||||||| ||| ||||||||| |||||||    
T  29241767 tataagaatgctattttgttagtgttattaaaaaagatatgaatttatagtatattt 29241823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 228 - 284
Target Start/End: Original strand, 34983769 - 34983825
Alignment:
Q  228 tataagaatgttatattgatggtgttattaaaaaatataagaatttatattatattt 284  Q
    ||||| ||| |||||||| |||||||||||||||| | || ||||| ||||||||||    
T  34983769 tataataatattatattgttggtgttattaaaaaagaaaataatttttattatattt 34983825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 226 - 262
Target Start/End: Complemental strand, 44104170 - 44104134
Alignment:
Q  226 catataagaatgttatattgatggtgttattaaaaaa 262  Q
    ||||||| |||||||||||| ||||||||||||||||    
T  44104170 catataataatgttatattgttggtgttattaaaaaa 44104134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 51; Significance: 4e-20; HSPs: 34)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 182 - 284
Target Start/End: Original strand, 15920025 - 15920126
Alignment:
Q  182 ggctgaatttttcatttttctaattacacctttaaacaaatttgcatataagaatgttatattgatggtgttattaaaaaatataagaatttatattata 281  Q
    ||||||||||||  || ||||||||| ||| |||||||||||| | ||||| |||||||||||| |||||||||| ||||| |||||||||| |||||||    
T  15920025 ggctgaattttttgttattctaattatacccttaaacaaattttcttataataatgttatattgttggtgttatt-aaaaagataagaatttttattata 15920123  T
Q  282 ttt 284  Q
    |||    
T  15920124 ttt 15920126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 203 - 269
Target Start/End: Complemental strand, 7976011 - 7975945
Alignment:
Q  203 aattacacctttaaacaaatttgcatataagaatgttatattgatggtgttattaaaaaatataaga 269  Q
    ||||| |||||||||||||||| | ||||| ||||| |||||| |||||||||||||||||||||||    
T  7976011 aattatacctttaaacaaattttcttataataatgtcatattgttggtgttattaaaaaatataaga 7975945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 228 - 284
Target Start/End: Original strand, 4438542 - 4438598
Alignment:
Q  228 tataagaatgttatattgatggtgttattaaaaaatataagaatttatattatattt 284  Q
    |||||||||||||||||| |||| | ||||||||| |||||||||||||||||||||    
T  4438542 tataagaatgttatattgttggtatcattaaaaaagataagaatttatattatattt 4438598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 213 - 284
Target Start/End: Complemental strand, 13206201 - 13206130
Alignment:
Q  213 ttaaacaaatttgcatataagaatgttatattgatggtgttattaaaaaatataagaatttatattatattt 284  Q
    |||||||||||||| | |||||||||||||||| |||||||| | ||||| |||||||||| || |||||||    
T  13206201 ttaaacaaatttgcttttaagaatgttatattgttggtgttaatgaaaaagataagaatttttaatatattt 13206130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 228 - 283
Target Start/End: Original strand, 19341860 - 19341915
Alignment:
Q  228 tataagaatgttatattgatggtgttattaaaaaatataagaatttatattatatt 283  Q
    ||||| |||||||||||| ||| ||||||||||||||||||||||| |||||||||    
T  19341860 tataataatgttatattgttggcgttattaaaaaatataagaatttttattatatt 19341915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 203 - 284
Target Start/End: Complemental strand, 11420505 - 11420424
Alignment:
Q  203 aattacacctttaaacaaatttgcatataagaatgttatattgatggtgttattaaaaaatataagaatttatattatattt 284  Q
    ||||| || |||||| |||||||  ||||||||| |||| ||| ||||||| || ||||| |||||||||||||||||||||    
T  11420505 aattatacatttaaataaatttgactataagaatattattttgttggtgttgttcaaaaagataagaatttatattatattt 11420424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 178 - 270
Target Start/End: Complemental strand, 35173462 - 35173369
Alignment:
Q  178 ttttggctgaatttttcattt-ttctaattacacctttaaacaaatttgcatataagaatgttatattgatggtgttattaaaaaatataagaa 270  Q
    ||||||||| ||||||  ||| ||||||||| ||| |||||||||| | | |||||||||||||||||| || ||||||||||| | |||||||    
T  35173462 ttttggctgtattttttttttattctaattatacccttaaacaaatgttcctataagaatgttatattgttgatgttattaaaatagataagaa 35173369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 200 - 284
Target Start/End: Complemental strand, 4205245 - 4205161
Alignment:
Q  200 tctaattacacctttaaacaaatttgcatataagaatgttatattgatggtgttattaaaaaatataagaatttatattatattt 284  Q
    |||||||| ||  |||||||||||| | ||||  |||||||||||| | ||| |||||||||| ||| |||||||||||||||||    
T  4205245 tctaattatactcttaaacaaattttcttatattaatgttatattgttcgtgatattaaaaaagataggaatttatattatattt 4205161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 234 - 284
Target Start/End: Original strand, 2442259 - 2442309
Alignment:
Q  234 aatgttatattgatggtgttattaaaaaatataagaatttatattatattt 284  Q
    |||||||||||| || ||||||||||||| |||| ||||||||||||||||    
T  2442259 aatgttatattgttgatgttattaaaaaagataaaaatttatattatattt 2442309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 238 - 284
Target Start/End: Original strand, 23038506 - 23038552
Alignment:
Q  238 ttatattgatggtgttattaaaaaatataagaatttatattatattt 284  Q
    |||||||| ||||||||||||||||  ||||||||||||||||||||    
T  23038506 ttatattgttggtgttattaaaaaaggtaagaatttatattatattt 23038552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 222 - 284
Target Start/End: Original strand, 34103436 - 34103498
Alignment:
Q  222 tttgcatataagaatgttatattgatggtgttattaaaaaatataagaatttatattatattt 284  Q
    ||||| ||||| |||||| ||||| || | |||||||||||||||| ||||||||||||||||    
T  34103436 tttgcttataataatgttttattgttgctattattaaaaaatataaaaatttatattatattt 34103498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 172 - 285
Target Start/End: Original strand, 36801828 - 36801942
Alignment:
Q  172 agagatttttggctgaatttttcatttttctaattacacctttaaacaaatttgcatataagaatgttatattgatggtgttattaaaaaata-taagaa 270  Q
    ||||| ||| |||||||||||| ||  ||  ||||| ||| |||||||||||| | ||||  ||||||| |||  ||||| |||||||||| | ||||||    
T  36801828 agagactttgggctgaattttttataatttcaattatacccttaaacaaattttcctatattaatgttacattcttggtggtattaaaaaaaaataagaa 36801927  T
Q  271 tttatattatatttt 285  Q
    |||||||||||||||    
T  36801928 tttatattatatttt 36801942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 172 - 284
Target Start/End: Original strand, 1657861 - 1657974
Alignment:
Q  172 agagatttttggctgaatttttcatttttctaattacacctttaaacaaatttgcatataagaatgttatattgatggtgttattaaaaaat-ataagaa 270  Q
    ||||| ||| |||||||||||| ||  ||  ||||| ||| |||||||||||| | ||||  ||||||| |||  ||||| ||||||||||  |||||||    
T  1657861 agagactttgggctgaattttttataatttcaattatacccttaaacaaattttcctatattaatgttacattcttggtggtattaaaaaaagataagaa 1657960  T
Q  271 tttatattatattt 284  Q
    ||||||||||||||    
T  1657961 tttatattatattt 1657974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 199 - 284
Target Start/End: Complemental strand, 11439154 - 11439069
Alignment:
Q  199 ttctaattacacctttaaacaaatttgcatataagaatgttatattgatggtgttattaaaaaatataagaatttatattatattt 284  Q
    ||||||||| || ||||||||||||| | ||||| ||| |||||||  ||| ||| ||||||| ||||| | ||||||||||||||    
T  11439154 ttctaattatacttttaaacaaattttcttataataatattatatttttggcgttgttaaaaattataaaattttatattatattt 11439069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 203 - 284
Target Start/End: Original strand, 34882270 - 34882350
Alignment:
Q  203 aattacacctttaaacaaatttgcatataagaatgttatattgatggtgttattaaaaaatataagaatttatattatattt 284  Q
    ||||| ||||||||||||| ||||| |||||||||||| |||| || ||| ||| ||||  |||| ||||||||||||||||    
T  34882270 aattatacctttaaacaaacttgca-ataagaatgttacattgttgatgtcattcaaaatgataataatttatattatattt 34882350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 203 - 283
Target Start/End: Original strand, 3539284 - 3539364
Alignment:
Q  203 aattacacctttaaacaaatttgcatataagaatgttatattgatggtgttattaaaaaatataagaatttatattatatt 283  Q
    ||||| ||| |||||||||||| ||||||| || ||||||||| ||  |||||||| ||| |||||||||| | |||||||    
T  3539284 aattatacccttaaacaaattttcatataataacgttatattgttgaggttattaataaagataagaattttttttatatt 3539364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 213 - 277
Target Start/End: Complemental strand, 40038964 - 40038900
Alignment:
Q  213 ttaaacaaatttgcatataagaatgttatattgatggtgttattaaaaaatataagaatttatat 277  Q
    |||||||||||| ||||||| | ||||||| || |||||| ||||||||  ||||||||||||||    
T  40038964 ttaaacaaatttacatataaaactgttataatgttggtgtcattaaaaatgataagaatttatat 40038900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 254 - 293
Target Start/End: Complemental strand, 4437525 - 4437486
Alignment:
Q  254 attaaaaaatataagaatttatattatattttctttattt 293  Q
    ||||||||||||||||||||||||||||||| || |||||    
T  4437525 attaaaaaatataagaatttatattatatttgctatattt 4437486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 220 - 283
Target Start/End: Original strand, 6629149 - 6629211
Alignment:
Q  220 aatttgcatataagaatgttatattgatggtgttattaaaaaatataagaatttatattatatt 283  Q
    ||||||| |||||||||  ||||||| |||||| ||||||||||||| ||||||| ||||||||    
T  6629149 aatttgcctataagaatactatattgttggtgtcattaaaaaatataggaattta-attatatt 6629211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 238 - 285
Target Start/End: Original strand, 11912045 - 11912092
Alignment:
Q  238 ttatattgatggtgttattaaaaaatataagaatttatattatatttt 285  Q
    |||||||| || ||||||||||||| |||||||||||||||| |||||    
T  11912045 ttatattgttgatgttattaaaaaagataagaatttatattacatttt 11912092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 213 - 284
Target Start/End: Original strand, 16337997 - 16338068
Alignment:
Q  213 ttaaacaaatttgcatataagaatgttatattgatggtgttattaaaaaatataagaatttatattatattt 284  Q
    |||||||||||||  |||||||||| ||||||| |||||| ||| ||||| ||||  | |||||||||||||    
T  16337997 ttaaacaaatttgtctataagaatgatatattgttggtgtcatttaaaaagataaacaattatattatattt 16338068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 213 - 284
Target Start/End: Complemental strand, 41790388 - 41790317
Alignment:
Q  213 ttaaacaaatttgcatataagaatgttatattgatggtgttattaaaaaatataagaatttatattatattt 284  Q
    ||||||||| |||  ||| | ||| |||||||| |||||||||||||||  |||||||||||||| ||||||    
T  41790388 ttaaacaaacttgtctattaaaatattatattgttggtgttattaaaaatgataagaatttatatcatattt 41790317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 214 - 284
Target Start/End: Complemental strand, 8082868 - 8082798
Alignment:
Q  214 taaacaaatttgcatataagaatgttatattgatggtgttattaaaaaatataagaatttatattatattt 284  Q
    ||||||||||| ||||||| |||||||||||  || ||| ||| ||||| |||| ||||| ||||||||||    
T  8082868 taaacaaatttacatataaaaatgttatatttttgttgtcattcaaaaagataaaaatttctattatattt 8082798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 8 - 66
Target Start/End: Original strand, 26042967 - 26043025
Alignment:
Q  8 tatttaaccactttatagttacaacttgctaaaatactcctttgaaaaaatgagtgggt 66  Q
    |||||||| ||||| |||||| |||||||||||| || ||||| ||||||| |||||||    
T  26042967 tatttaactactttttagttataacttgctaaaacacaccttttaaaaaataagtgggt 26043025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 213 - 267
Target Start/End: Complemental strand, 29038065 - 29038011
Alignment:
Q  213 ttaaacaaatttgcatataagaatgttatattgatggtgttattaaaaaatataa 267  Q
    ||||||| |||| | ||||| |||||||||||| |||||||||||||||| ||||    
T  29038065 ttaaacatattttcctataataatgttatattgttggtgttattaaaaaagataa 29038011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 234 - 284
Target Start/End: Complemental strand, 30567863 - 30567813
Alignment:
Q  234 aatgttatattgatggtgttattaaaaaatataagaatttatattatattt 284  Q
    |||||||||||| || | ||||||||||| |||| ||||||||||||||||    
T  30567863 aatgttatattgttgatattattaaaaaagataataatttatattatattt 30567813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 236 - 282
Target Start/End: Original strand, 41372490 - 41372536
Alignment:
Q  236 tgttatattgatggtgttattaaaaaatataagaatttatattatat 282  Q
    |||||||||| ||| || ||||||||| |||||||||||||||||||    
T  41372490 tgttatattgttggcgtcattaaaaaaaataagaatttatattatat 41372536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 172 - 284
Target Start/End: Original strand, 415130 - 415243
Alignment:
Q  172 agagatttttggctgaatttttcatttttctaattacacctttaaacaaatttgcatataagaatgttatattgatggtgttatt-aaaaaatataagaa 270  Q
    ||||| ||| |||||||||||| ||  ||  ||||| ||| |||||||||||| | ||||  ||||||| |||  ||||| |||| |||||| |||||||    
T  415130 agagactttgggctgaattttttataatttcaattatacccttaaacaaattttcctatattaatgttacattcttggtggtattaaaaaaagataagaa 415229  T
Q  271 tttatattatattt 284  Q
    ||| ||||||||||    
T  415230 tttgtattatattt 415243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 228 - 273
Target Start/End: Complemental strand, 11876489 - 11876444
Alignment:
Q  228 tataagaatgttatattgatggtgttattaaaaaatataagaattt 273  Q
    ||||| |||||||||||| || ||| ||||||||||||||||||||    
T  11876489 tataataatgttatattgttgttgtgattaaaaaatataagaattt 11876444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 228 - 273
Target Start/End: Complemental strand, 11891496 - 11891451
Alignment:
Q  228 tataagaatgttatattgatggtgttattaaaaaatataagaattt 273  Q
    ||||| |||||||||||| || ||| ||||||||||||||||||||    
T  11891496 tataataatgttatattgttgttgtgattaaaaaatataagaattt 11891451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 172 - 284
Target Start/End: Complemental strand, 14031871 - 14031758
Alignment:
Q  172 agagatttttggctgaatttttcatttttctaattacacctttaaacaaatttgcatataagaatgttatattgatggtgttatt-aaaaaatataagaa 270  Q
    ||||| ||| |||||||||||| ||  ||  ||||| ||| |||||||||||| | ||||  ||||||| |||  ||||| |||| |||||| |||||||    
T  14031871 agagactttgggctgaattttttataatttcaattatacccttaaacaaattttcctatattaatgttacattcttggtggtattaaaaaaagataagaa 14031772  T
Q  271 tttatattatattt 284  Q
    || |||||||||||    
T  14031771 ttcatattatattt 14031758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 172 - 284
Target Start/End: Complemental strand, 37402315 - 37402202
Alignment:
Q  172 agagatttttggctgaatttttcatttttctaattacacctttaaacaaatttgcatataagaatgttatattgatggtgttatt-aaaaaatataagaa 270  Q
    ||||| ||| |||||||||||| ||  ||  ||||| ||| |||||||||||| | ||||  ||||||| |||  ||||| |||| |||||| |||||||    
T  37402315 agagactttgggctgaattttttataatttcaattatacccttaaacaaattttcctatattaatgttacattcttggtggtattaaaaaaagataagaa 37402216  T
Q  271 tttatattatattt 284  Q
    ||| ||||||||||    
T  37402215 tttgtattatattt 37402202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 202 - 283
Target Start/End: Original strand, 39199211 - 39199292
Alignment:
Q  202 taattacacctttaaacaaatttgcatataagaatgttatattgatggtgttattaaaaaatataagaatttatattatatt 283  Q
    |||||| ||| |||||||||||||   ||| ||||||||| ||| | ||| |||| ||||| |||| |||||||||||||||    
T  39199211 taattatacccttaaacaaatttgacaatatgaatgttattttgttagtgatattcaaaaagataataatttatattatatt 39199292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 247 - 283
Target Start/End: Original strand, 40721264 - 40721300
Alignment:
Q  247 tggtgttattaaaaaatataagaatttatattatatt 283  Q
    ||||||||||||||||  |||||||||||||||||||    
T  40721264 tggtgttattaaaaaaggtaagaatttatattatatt 40721300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 48; Significance: 3e-18; HSPs: 42)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 216 - 287
Target Start/End: Complemental strand, 1292154 - 1292083
Alignment:
Q  216 aacaaatttgcatataagaatgttatattgatggtgttattaaaaaatataagaatttatattatattttct 287  Q
    ||||||||| | |||||||||| ||||||| |||||| ||||||||| ||||||||||||||||||||||||    
T  1292154 aacaaatttacttataagaatgctatattgttggtgtcattaaaaaagataagaatttatattatattttct 1292083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 209 - 285
Target Start/End: Complemental strand, 47437882 - 47437806
Alignment:
Q  209 acctttaaacaaatttgcatataagaatgttatattgatggtgttattaaaaaatataagaatttatattatatttt 285  Q
    ||||||||||| |||||  ||||||||| | || ||| |||||||||||||||| ||||||||||||||||||||||    
T  47437882 acctttaaacatatttgactataagaatttgattttgttggtgttattaaaaaagataagaatttatattatatttt 47437806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 213 - 292
Target Start/End: Complemental strand, 10039493 - 10039414
Alignment:
Q  213 ttaaacaaatttgcatataagaatgttatattgatggtgttattaaaaaatataagaatttatattatattttctttatt 292  Q
    ||||||||| ||||||||||| ||||||| ||| ||| || |||| ||||||||| ||||||||||||||||||| ||||    
T  10039493 ttaaacaaacttgcatataagcatgttattttgttggcgtcattagaaaatataaaaatttatattatattttctatatt 10039414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 214 - 284
Target Start/End: Original strand, 32358849 - 32358919
Alignment:
Q  214 taaacaaatttgcatataagaatgttatattgatggtgttattaaaaaatataagaatttatattatattt 284  Q
    ||||||||||||||||||| |||||||||||  || ||| ||| ||||| |||||||||||||||||||||    
T  32358849 taaacaaatttgcatataaaaatgttatatttttgttgtcattgaaaaagataagaatttatattatattt 32358919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 199 - 284
Target Start/End: Original strand, 43358729 - 43358814
Alignment:
Q  199 ttctaattacacctttaaacaaatttgcatataagaatgttatattgatggtgttattaaaaaatataagaatttatattatattt 284  Q
    ||||||||| || |||||| |||||||  ||||| |||||||| ||| |||||| ||| ||||| |||||||||||||||||||||    
T  43358729 ttctaattatacttttaaataaatttgactataaaaatgttattttgttggtgtaatttaaaaagataagaatttatattatattt 43358814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 232 - 284
Target Start/End: Original strand, 35338366 - 35338418
Alignment:
Q  232 agaatgttatattgatggtgttattaaaaaatataagaatttatattatattt 284  Q
    |||||||||||||| |||||| ||||||||| |||||||||||||||||||||    
T  35338366 agaatgttatattgttggtgtcattaaaaaagataagaatttatattatattt 35338418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 213 - 292
Target Start/End: Complemental strand, 10039705 - 10039626
Alignment:
Q  213 ttaaacaaatttgcatataagaatgttatattgatggtgttattaaaaaatataagaatttatattatattttctttatt 292  Q
    ||||||||| |||| |||||| ||||||| ||| |||||| |||| |||| |||| ||||||||||||||||||| ||||    
T  10039705 ttaaacaaacttgcttataagcatgttattttgttggtgtcattagaaaagataaaaatttatattatattttctatatt 10039626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 234 - 284
Target Start/End: Original strand, 29285585 - 29285635
Alignment:
Q  234 aatgttatattgatggtgttattaaaaaatataagaatttatattatattt 284  Q
    |||||||||||| |||||||||| ||||| |||||||||||||||||||||    
T  29285585 aatgttatattgttggtgttattgaaaaacataagaatttatattatattt 29285635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 204 - 273
Target Start/End: Original strand, 40358459 - 40358528
Alignment:
Q  204 attacacctttaaacaaatttgcatataagaatgttatattgatggtgttattaaaaaatataagaattt 273  Q
    |||| ||| |||||||||||| | ||||| |||||||||||| || ||||||||||||| ||||||||||    
T  40358459 attatacccttaaacaaattttcctataacaatgttatattgttgatgttattaaaaaagataagaattt 40358528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 182 - 262
Target Start/End: Complemental strand, 10040924 - 10040844
Alignment:
Q  182 ggctgaatttttcatttttctaattacacctttaaacaaatttgcatataagaatgttatattgatggtgttattaaaaaa 262  Q
    ||||||||||||  |  ||||||||| ||| |||||||||||| | ||||| |||||||||||| |||||||||| |||||    
T  10040924 ggctgaattttttgtaattctaattatacccttaaacaaattttcctataaaaatgttatattgttggtgttattgaaaaa 10040844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 209 - 273
Target Start/End: Original strand, 39617376 - 39617440
Alignment:
Q  209 acctttaaacaaatttgcatataagaatgttatattgatggtgttattaaaaaatataagaattt 273  Q
    ||||||||||||||||   ||| | |||||||||| | |||||||||||||||||||||||||||    
T  39617376 acctttaaacaaatttttctatgataatgttatatcgttggtgttattaaaaaatataagaattt 39617440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 213 - 284
Target Start/End: Complemental strand, 9059385 - 9059314
Alignment:
Q  213 ttaaacaaatttgcatataagaatgttatattgatggtgttattaaaaaatataagaatttatattatattt 284  Q
    ||||||||||||   ||||  |||||||||||| |||||||||||||||| ||||  |||||||||||||||    
T  9059385 ttaaacaaatttttctatattaatgttatattgttggtgttattaaaaaagataaagatttatattatattt 9059314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 234 - 285
Target Start/End: Complemental strand, 44410588 - 44410537
Alignment:
Q  234 aatgttatattgatggtgttattaaaaaatataagaatttatattatatttt 285  Q
    |||||||  ||| |||||| ||||||||||||||||||||||||||||||||    
T  44410588 aatgttactttgttggtgtcattaaaaaatataagaatttatattatatttt 44410537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 234 - 284
Target Start/End: Original strand, 42181693 - 42181743
Alignment:
Q  234 aatgttatattgatggtgttattaaaaaatataagaatttatattatattt 284  Q
    |||||||||||| | |||||||||| |||||||| ||||||||||||||||    
T  42181693 aatgttatattgttagtgttattaataaatataaaaatttatattatattt 42181743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 172 - 284
Target Start/End: Complemental strand, 5096625 - 5096512
Alignment:
Q  172 agagatttttggctgaatttttcatttttctaattacacctttaaacaaatttgcatataagaatgttatattgatggtgttattaaaaaat-ataagaa 270  Q
    ||||| ||| |||||||||||| ||  ||  ||||| ||| |||||||||||| | ||||  ||||||| |||  ||||| ||||||||||  |||||||    
T  5096625 agagactttgggctgaattttttataatttcaattatacccttaaacaaattttcctatattaatgttacattcttggtggtattaaaaaaagataagaa 5096526  T
Q  271 tttatattatattt 284  Q
    ||||||||||||||    
T  5096525 tttatattatattt 5096512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 203 - 284
Target Start/End: Complemental strand, 14624106 - 14624025
Alignment:
Q  203 aattacacctttaaacaaatttgcatataagaatgttatattgatggtgttattaaaaaatataagaatttatattatattt 284  Q
    ||||| ||| |||| ||||||| ||||||  |||||| ||||| ||||| | |||||||| |||| ||||||||||||||||    
T  14624106 aattatacccttaatcaaattttcatatattaatgttgtattgttggtggtgttaaaaaagataaaaatttatattatattt 14624025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 227 - 284
Target Start/End: Complemental strand, 38237545 - 38237488
Alignment:
Q  227 atataagaatgttatattgatggtgttattaaaaaatataagaatttatattatattt 284  Q
    |||||| ||||||||| || |||||| ||| ||||| |||||||||||||||||||||    
T  38237545 atataaaaatgttatactgttggtgtcattgaaaaagataagaatttatattatattt 38237488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 228 - 273
Target Start/End: Complemental strand, 40659505 - 40659460
Alignment:
Q  228 tataagaatgttatattgatggtgttattaaaaaatataagaattt 273  Q
    ||||| |||||||||||| |||||||||||||||| ||||||||||    
T  40659505 tataataatgttatattgttggtgttattaaaaaagataagaattt 40659460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 199 - 267
Target Start/End: Complemental strand, 31177414 - 31177346
Alignment:
Q  199 ttctaattacacctttaaacaaatttgcatataagaatgttatattgatggtgttattaaaaaatataa 267  Q
    ||||||||| |||| ||||||||||| | ||||| |||||||||  | |||||||||||||||| ||||    
T  31177414 ttctaattatacctataaacaaattttcttataataatgttataccgttggtgttattaaaaaagataa 31177346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 174 - 284
Target Start/End: Original strand, 4962258 - 4962368
Alignment:
Q  174 agatttttggctgaatttttcat-ttttctaattacacctttaaacaaatttgcatataagaatgttatattgatggtgttattaaaaaatataagaatt 272  Q
    |||||||||||||||||||| || ||||||| ||| | | | |||||||||| | | ||  ||| |||||||| || || |||||||||| ||||| |||    
T  4962258 agatttttggctgaattttttatattttcta-ttatatcctaaaacaaattttcttgtattaatattatattgttgatggtattaaaaaagataaggatt 4962356  T
Q  273 tatattatattt 284  Q
    ||||||||||||    
T  4962357 tatattatattt 4962368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 213 - 284
Target Start/End: Original strand, 37250655 - 37250726
Alignment:
Q  213 ttaaacaaatttgcatataagaatgttatattgatggtgttattaaaaaatataagaatttatattatattt 284  Q
    |||||||||||||   ||||||||  ||||||| || ||||||||||||| | |||||||| ||||||||||    
T  37250655 ttaaacaaatttgtcaataagaattctatattgttgttgttattaaaaaagacaagaatttttattatattt 37250726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 216 - 279
Target Start/End: Complemental strand, 41750351 - 41750288
Alignment:
Q  216 aacaaatttgcatataagaatgttatattgatggtgttattaaaaaatataagaatttatatta 279  Q
    ||||||||| | ||||| |||||||||||| | || | |||||||| |||||||||||||||||    
T  41750351 aacaaattttcttataaaaatgttatattgtttgtttcattaaaaattataagaatttatatta 41750288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 8 - 66
Target Start/End: Original strand, 45225288 - 45225347
Alignment:
Q  8 tatttaaccactttatagttac-aacttgctaaaatactcctttgaaaaaatgagtgggt 66  Q
    |||||||||||||| ||||||  ||||||||||||||||||||  ||||||| |||||||    
T  45225288 tatttaaccactttttagttattaacttgctaaaatactccttctaaaaaataagtgggt 45225347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 8 - 66
Target Start/End: Original strand, 45225421 - 45225480
Alignment:
Q  8 tatttaaccactttatagttac-aacttgctaaaatactcctttgaaaaaatgagtgggt 66  Q
    |||||||||||||| ||||||  ||||||||||||||||||||  ||||||| |||||||    
T  45225421 tatttaaccactttttagttattaacttgctaaaatactccttctaaaaaataagtgggt 45225480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 8 - 66
Target Start/End: Original strand, 938923 - 938981
Alignment:
Q  8 tatttaaccactttatagttacaacttgctaaaatactcctttgaaaaaatgagtgggt 66  Q
    |||||||| ||||| |||||| |||||||||||| || ||||| ||||||| |||||||    
T  938923 tatttaactactttttagttataacttgctaaaacacaccttttaaaaaataagtgggt 938981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 203 - 284
Target Start/End: Complemental strand, 4094380 - 4094301
Alignment:
Q  203 aattacacctttaaacaaatttgcatataagaatgttatattgatggtgttattaaaaaatataagaatttatattatattt 284  Q
    ||||| || |||||| |||||||||||||| |||  ||| ||| |||||| ||| |||||||| | ||||||||||||||||    
T  4094380 aattatacatttaaataaatttgcatataataat--tatgttgttggtgtcattcaaaaatatgataatttatattatattt 4094301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 228 - 282
Target Start/End: Original strand, 4492630 - 4492684
Alignment:
Q  228 tataagaatgttatattgatggtgttattaaaaaatataagaatttatattatat 282  Q
    ||||||||| | |||||  |||||||||| ||||| |||||||||||||||||||    
T  4492630 tataagaatatcatatttttggtgttatttaaaaagataagaatttatattatat 4492684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 214 - 284
Target Start/End: Original strand, 5789219 - 5789289
Alignment:
Q  214 taaacaaatttgcatataagaatgttatattgatggtgttattaaaaaatataagaatttatattatattt 284  Q
    ||||||||||| | ||||  |||||||||||| ||||| |||||||||| |||   |||||||||||||||    
T  5789219 taaacaaattttcttatattaatgttatattgttggtggtattaaaaaagatacagatttatattatattt 5789289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 203 - 284
Target Start/End: Complemental strand, 7192385 - 7192301
Alignment:
Q  203 aattacacctttaaacaaatttgcatataagaatgtta---tattgatggtgttattaaaaaatataagaatttatattatattt 284  Q
    ||||| ||| ||||| |||||||  |||||||||||||   | ||| | |||||||| ||||| |||||||||||||||||||||    
T  7192385 aattatacccttaaataaatttgactataagaatgttaattttttgtttgtgttatttaaaaagataagaatttatattatattt 7192301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 233 - 283
Target Start/End: Original strand, 8146064 - 8146114
Alignment:
Q  233 gaatgttatattgatggtgttattaaaaaatataagaatttatattatatt 283  Q
    |||||| |||||| |||||| ||||||||| ||||||| ||||||||||||    
T  8146064 gaatgtaatattgttggtgtcattaaaaaagataagaaattatattatatt 8146114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 214 - 284
Target Start/End: Original strand, 13640921 - 13640991
Alignment:
Q  214 taaacaaatttgcatataagaatgttatattgatggtgttattaaaaaatataagaatttatattatattt 284  Q
    |||||||||||   ||||| |||||||||||| |||| ||||||||||| || | ||||| ||||||||||    
T  13640921 taaacaaattttgttataataatgttatattgttggttttattaaaaaagatgataatttttattatattt 13640991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 214 - 272
Target Start/End: Complemental strand, 21819607 - 21819549
Alignment:
Q  214 taaacaaatttgcatataagaatgttatattgatggtgttattaaaaaatataagaatt 272  Q
    ||||||||||||  |||||||||||||| ||| || ||||||||| |||||||| ||||    
T  21819607 taaacaaatttgattataagaatgttattttgttgatgttattaacaaatataacaatt 21819549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 199 - 284
Target Start/End: Original strand, 31309725 - 31309811
Alignment:
Q  199 ttctaattacacctttaaacaaatttgcatataagaatgttatattgatggtgttatt-aaaaaatataagaatttatattatattt 284  Q
    ||||||||| ||| ||||||||||||   ||||  |||||||||||| ||||| |||| |||||| |||||  ||||||||||||||    
T  31309725 ttctaattatacccttaaacaaattttattatattaatgttatattgttggtggtattaaaaaaagataaggttttatattatattt 31309811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 202 - 284
Target Start/End: Original strand, 35791927 - 35792008
Alignment:
Q  202 taattacacctttaaacaaatttgcatataagaatgttatattgatggtgttattaaaaaatataagaatttatattatattt 284  Q
    |||||| |||||||||||||||| | ||||| |||||||||||| || ||| |  |||||| |||| |||| |||||||||||    
T  35791927 taattatacctttaaacaaattttcctataataatgttatattgttgatgtcaccaaaaaagataa-aattaatattatattt 35792008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 213 - 282
Target Start/End: Original strand, 11485596 - 11485665
Alignment:
Q  213 ttaaacaaatttgcatataagaatgttatattgatggtgttattaaaaaatataagaatttatattatat 282  Q
    |||||||||||| | ||||  |||||||||||| | |||  ||||||||| ||||| |||||||||||||    
T  11485596 ttaaacaaattttcctatattaatgttatattgtttgtggcattaaaaaagataaggatttatattatat 11485665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 231 - 284
Target Start/End: Complemental strand, 25603097 - 25603045
Alignment:
Q  231 aagaatgttatattgatggtgttattaaaaaatataagaatttatattatattt 284  Q
    ||||||||||||| | |||||| ||||||||| |||||||||| ||||||||||    
T  25603097 aagaatgttatatcgttggtgtgattaaaaaa-ataagaatttttattatattt 25603045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 228 - 285
Target Start/End: Original strand, 32310772 - 32310829
Alignment:
Q  228 tataagaatgttatattgatggtgttattaaaaaatataagaatttatattatatttt 285  Q
    |||||||||||||| ||| | || | ||||||||| |||||||||||||| |||||||    
T  32310772 tataagaatgttattttgttagtctcattaaaaaagataagaatttatataatatttt 32310829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 213 - 273
Target Start/End: Complemental strand, 14625182 - 14625122
Alignment:
Q  213 ttaaacaaatttgcatataagaatgttatattgatggtgttattaaaaaatataagaattt 273  Q
    ||||| |||||| | ||||| |||||||||||  || ||||||||||||| ||||||||||    
T  14625182 ttaaataaattttcctataacaatgttatattattgatgttattaaaaaagataagaattt 14625122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 203 - 267
Target Start/End: Complemental strand, 25611281 - 25611217
Alignment:
Q  203 aattacacctttaaacaaatttgcatataagaatgttatattgatggtgttattaaaaaatataa 267  Q
    ||||| || ||||||||||||| ||| ||| ||| ||||||||  ||||||||||||||| ||||    
T  25611281 aattatacatttaaacaaattttcatgtaataatattatattgtcggtgttattaaaaaagataa 25611217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 212 - 284
Target Start/End: Original strand, 27362826 - 27362898
Alignment:
Q  212 tttaaacaaatttgcatataagaatgttatattgatggtgttattaaaaaatataagaatttatattatattt 284  Q
    |||||||||||||   | ||| |||||||||||| || |||||  |||||||||||||||  |||||||||||    
T  27362826 tttaaacaaatttttctttaataatgttatattgttgatgttaacaaaaaatataagaatggatattatattt 27362898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 203 - 267
Target Start/End: Original strand, 34751869 - 34751933
Alignment:
Q  203 aattacacctttaaacaaatttgcatataagaatgttatattgatggtgttattaaaaaatataa 267  Q
    ||||| ||| ||||| |||||| |||||||  ||||||||||| | |||||||||||||| ||||    
T  34751869 aattataccattaaataaattttcatataatgatgttatattgttagtgttattaaaaaagataa 34751933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 8 - 64
Target Start/End: Complemental strand, 38368024 - 38367968
Alignment:
Q  8 tatttaaccactttatagttacaacttgctaaaatactcctttgaaaaaatgagtgg 64  Q
    |||||||| ||||| |||||| |||||||||||| || ||||| ||||||| |||||    
T  38368024 tatttaactactttttagttataacttgctaaaacacaccttttaaaaaataagtgg 38367968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 48; Significance: 3e-18; HSPs: 43)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 173 - 284
Target Start/End: Original strand, 37681301 - 37681412
Alignment:
Q  173 gagatttttggctgaatttttcatttttctaattacacctttaaacaaatttgcatataagaatgttatattgatggtgttattaaaaaatataagaatt 272  Q
    |||||||| |||||||||||| ||  ||  ||||| ||| |||||||||||| | ||||  |||||||||||| ||||| |||||||||| ||||| |||    
T  37681301 gagattttgggctgaattttttataatttcaattatacccttaaacaaattttcctatattaatgttatattgttggtggtattaaaaaagataaggatt 37681400  T
Q  273 tatattatattt 284  Q
    ||||||||||||    
T  37681401 tatattatattt 37681412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 213 - 284
Target Start/End: Original strand, 19578675 - 19578746
Alignment:
Q  213 ttaaacaaatttgcatataagaatgttatattgatggtgttattaaaaaatataagaatttatattatattt 284  Q
    |||||||||||| |  |||| |||||||||||| ||||||||||||||||||||||| ||| ||||||||||    
T  19578675 ttaaacaaattttccaataataatgttatattgttggtgttattaaaaaatataagagtttttattatattt 19578746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 234 - 284
Target Start/End: Original strand, 17583224 - 17583274
Alignment:
Q  234 aatgttatattgatggtgttattaaaaaatataagaatttatattatattt 284  Q
    |||||||||||| |||||||||||||||| |||||||||| ||||||||||    
T  17583224 aatgttatattgttggtgttattaaaaaagataagaatttttattatattt 17583274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 177 - 283
Target Start/End: Complemental strand, 26513130 - 26513024
Alignment:
Q  177 tttttggctgaatttttcatttttctaattacacctttaaacaaatttgcatataagaatgttatattgatggtgttattaaaaaatataagaatttata 276  Q
    |||| |||| ||||||||||| ||  || || ||||||||||||||||   | |||||||||||||||| | || |||| |||||| |||||||||| ||    
T  26513130 ttttaggcttaatttttcattatttcaactatacctttaaacaaatttatttttaagaatgttatattgttcgttttatcaaaaaagataagaattttta 26513031  T
Q  277 ttatatt 283  Q
    |||||||    
T  26513030 ttatatt 26513024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 203 - 284
Target Start/End: Original strand, 2594462 - 2594543
Alignment:
Q  203 aattacacctttaaacaaatttgcatataagaatgttatattgatggtgttattaaaaaatataagaatttatattatattt 284  Q
    ||||||||| |||| ||||||||   |||| |||||||| ||| |||||| ||| ||||| |||||||||||||||||||||    
T  2594462 aattacacccttaatcaaatttgaccataacaatgttattttgctggtgtcattcaaaaagataagaatttatattatattt 2594543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 176 - 261
Target Start/End: Complemental strand, 2699610 - 2699525
Alignment:
Q  176 atttttggctgaatttttcatttttctaattacacctttaaacaaatttgcatataagaatgttatattgatggtgttattaaaaa 261  Q
    |||||||||||| ||||||||| ||  ||||| ||| ||| | ||||||  |||||| |||||||||||| |||||||||||||||    
T  2699610 atttttggctgactttttcattatttcaattatacccttatataaatttttatataataatgttatattgttggtgttattaaaaa 2699525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 214 - 283
Target Start/End: Complemental strand, 14771325 - 14771256
Alignment:
Q  214 taaacaaatttgcatataagaatgttatattgatggtgttattaaaaaatataagaatttatattatatt 283  Q
    ||||||||||| | ||||| |||| ||||||| ||| |||| |||||||||||||||||| |||||||||    
T  14771325 taaacaaattttcttataataatgctatattgttggcgttactaaaaaatataagaatttttattatatt 14771256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 172 - 284
Target Start/End: Original strand, 28247262 - 28247374
Alignment:
Q  172 agagatttttggctgaatttttcatttttctaattacacctttaaacaaatttgcatataagaatgttatattgatggtgttattaaaaaatataagaat 271  Q
    ||||||||| || || |||||| ||| ||| ||||| ||| |||||||||||| |||||||  ||||||||| | || ||| ||| ||||  |||| |||    
T  28247262 agagattttgggttggattttttattgttccaattatacccttaaacaaattttcatataatgatgttatatagttgatgtcattgaaaatgataaaaat 28247361  T
Q  272 ttatattatattt 284  Q
    |||||||||||||    
T  28247362 ttatattatattt 28247374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 205 - 284
Target Start/End: Original strand, 54114326 - 54114403
Alignment:
Q  205 ttacacctttaaacaaatttgcatataagaatgttatattgatggtgttattaaaaaatataagaatttatattatattt 284  Q
    ||||||| |||  ||||||||| |||| ||||||||||||  || ||||||||||||| |||||||||||||||||||||    
T  54114326 ttacacccttatgcaaatttgcctatatgaatgttatattagtg-tgttattaaaaaa-ataagaatttatattatattt 54114403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 212 - 274
Target Start/End: Original strand, 1149688 - 1149750
Alignment:
Q  212 tttaaacaaatttgcatataagaatgttatattgatggtgttattaaaaaatataagaattta 274  Q
    ||||||||||||||| | ||| ||||||||| || |||||||||| ||||| |||||||||||    
T  1149688 tttaaacaaatttgcctgtaacaatgttataatgttggtgttattgaaaaaaataagaattta 1149750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 203 - 285
Target Start/End: Original strand, 37761154 - 37761236
Alignment:
Q  203 aattacacctttaaacaaatttgcatataagaatgttatattgatggtgttattaaaaaatataagaatttatattatatttt 285  Q
    ||||| || ||||| ||| ||||  |||||||||||||| ||  |||||||||| ||||| |||||||||||||| |||||||    
T  37761154 aattatacttttaagcaattttgattataagaatgttattttactggtgttatttaaaaagataagaatttatataatatttt 37761236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 174 - 267
Target Start/End: Complemental strand, 7982904 - 7982812
Alignment:
Q  174 agatttttggctgaatttttcatttttctaattacacctttaaacaaatttgcatataagaatgttatattgatggtgttattaaaaaatataa 267  Q
    ||||||| ||||||  ||||  || ||| ||||| |||||||||||||||| |||| || ||| |||||||| |||||||||||||||| ||||    
T  7982904 agattttgggctgacatttttgttattccaattatacctttaaacaaattttcata-aataatattatattgttggtgttattaaaaaagataa 7982812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 228 - 281
Target Start/End: Original strand, 34804381 - 34804434
Alignment:
Q  228 tataagaatgttatattgatggtgttattaaaaaatataagaatttatattata 281  Q
    ||||| |||||||||||| || ||||||||||||||||||||| |||| |||||    
T  34804381 tataataatgttatattgttgatgttattaaaaaatataagaacttattttata 34804434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 199 - 284
Target Start/End: Original strand, 39948866 - 39948951
Alignment:
Q  199 ttctaattacacctttaaacaaatttgcatataagaatgttatattgatggtgttattaaaaaatataagaatttatattatattt 284  Q
    ||||||||| ||  ||||||| ||||   ||||| |||||||||||| |||| || |||||||| |||||||||| ||||||||||    
T  39948866 ttctaattatacacttaaacatatttttctataataatgttatattgttggtcttgttaaaaaaaataagaatttttattatattt 39948951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 234 - 287
Target Start/End: Original strand, 41922977 - 41923029
Alignment:
Q  234 aatgttatattgatggtgttattaaaaaatataagaatttatattatattttct 287  Q
    |||||||||||| | || |||||||||||||||||||||||| |||||||||||    
T  41922977 aatgttatattgtttgt-ttattaaaaaatataagaatttatgttatattttct 41923029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 172 - 284
Target Start/End: Complemental strand, 44177125 - 44177012
Alignment:
Q  172 agagatttttggctgaatttttcatttttctaattacacctttaaacaaatttgcatataagaatgttatattgatggtgttattaaaaaat-ataagaa 270  Q
    ||||| ||| |||||||||||| ||  ||  ||||| ||| |||||||||||| | ||||  ||||||| |||  ||||| ||||||||||  |||||||    
T  44177125 agagactttgggctgaattttttataatttcaattatacccttaaacaaattttcctatattaatgttacattcttggtggtattaaaaaaagataagaa 44177026  T
Q  271 tttatattatattt 284  Q
    ||||||||||||||    
T  44177025 tttatattatattt 44177012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 172 - 284
Target Start/End: Complemental strand, 44183806 - 44183693
Alignment:
Q  172 agagatttttggctgaatttttcatttttctaattacacctttaaacaaatttgcatataagaatgttatattgatggtgttatt-aaaaaatataagaa 270  Q
    ||||| ||| |||||||||||| ||  || |||||| ||| |||||||||||| | ||||  ||||||| |||  ||||| |||| |||||| |||||||    
T  44183806 agagagtttgggctgaattttttataattttaattatacccttaaacaaattttcctatattaatgttacattcttggtggtattaaaaaaagataagaa 44183707  T
Q  271 tttatattatattt 284  Q
    ||| ||||||||||    
T  44183706 tttgtattatattt 44183693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 228 - 281
Target Start/End: Original strand, 47410924 - 47410977
Alignment:
Q  228 tataagaatgttatattgatggtgttattaaaaaatataagaatttatattata 281  Q
    |||||||||  ||| ||| |||||||||||||||| ||||||||||||||||||    
T  47410924 tataagaattatattttgttggtgttattaaaaaagataagaatttatattata 47410977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 228 - 281
Target Start/End: Original strand, 47411060 - 47411113
Alignment:
Q  228 tataagaatgttatattgatggtgttattaaaaaatataagaatttatattata 281  Q
    |||||||||  ||| ||| |||||||||||||||| ||||||||||||||||||    
T  47411060 tataagaattatattttgttggtgttattaaaaaagataagaatttatattata 47411113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 216 - 284
Target Start/End: Complemental strand, 20037670 - 20037602
Alignment:
Q  216 aacaaatttgcatataagaatgttatattgatggtgttattaaaaaatataagaatttatattatattt 284  Q
    ||||||||||| | ||| |||| ||| ||| |||||||||||||||| |||||||||  ||||||||||    
T  20037670 aacaaatttgcttttaaaaatgctattttgttggtgttattaaaaaagataagaattattattatattt 20037602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 213 - 277
Target Start/End: Complemental strand, 42097380 - 42097316
Alignment:
Q  213 ttaaacaaatttgcatataagaatgttatattgatggtgttattaaaaaatataagaatttatat 277  Q
    |||||||||||||| ||||||| ||||| ||||  ||||||||| ||| ||| ||||||||||||    
T  42097380 ttaaacaaatttgcttataagagtgttacattgtcggtgttattcaaacataaaagaatttatat 42097316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 213 - 245
Target Start/End: Complemental strand, 51103277 - 51103245
Alignment:
Q  213 ttaaacaaatttgcatataagaatgttatattg 245  Q
    |||||||||||||||||||||||||||||||||    
T  51103277 ttaaacaaatttgcatataagaatgttatattg 51103245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 233 - 284
Target Start/End: Original strand, 36637167 - 36637218
Alignment:
Q  233 gaatgttatattgatggtgttattaaaaaatataagaatttatattatattt 284  Q
    ||||| ||||||| | |||||||||||||| |||||||||| ||||||||||    
T  36637167 gaatgatatattgtttgtgttattaaaaaagataagaatttttattatattt 36637218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 229 - 284
Target Start/End: Original strand, 50585749 - 50585804
Alignment:
Q  229 ataagaatgttatattgatggtgttattaaaaaatataagaatttatattatattt 284  Q
    |||||||| |||| ||| |||||||||| ||||| |||| ||||||||||||||||    
T  50585749 ataagaatattattttgttggtgttattcaaaaagataaaaatttatattatattt 50585804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 213 - 284
Target Start/End: Original strand, 51103401 - 51103471
Alignment:
Q  213 ttaaacaaatttgcatataagaatgttatattgatggtgttattaaaaaatataagaatttatattatattt 284  Q
    |||||||||||||   |||  |||||||| ||| ||||||||| |||||||||||||| |||||||||||||    
T  51103401 ttaaacaaatttgaccatacaaatgttattttgttggtgttat-aaaaaatataagaacttatattatattt 51103471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 203 - 273
Target Start/End: Complemental strand, 21585914 - 21585844
Alignment:
Q  203 aattacacctttaaacaaatttgcatataagaatgttatattgatggtgttattaaaaaatataagaattt 273  Q
    ||||| |||||||||||| ||| | ||||| |||||||||||| |  | ||||||||||| ||||||||||    
T  21585914 aattatacctttaaacaacttttcgtataataatgttatattgttactattattaaaaaagataagaattt 21585844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 234 - 284
Target Start/End: Complemental strand, 25441644 - 25441594
Alignment:
Q  234 aatgttatattgatggtgttattaaaaaatataagaatttatattatattt 284  Q
    |||| ||||||| ||||| |||||||||| |||| ||||||||||||||||    
T  25441644 aatgctatattgttggtgatattaaaaaagataataatttatattatattt 25441594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 203 - 277
Target Start/End: Original strand, 26838556 - 26838630
Alignment:
Q  203 aattacacctttaaacaaatttgcatataagaatgttatattgatggtgttattaaaaaatataagaatttatat 277  Q
    |||||||||||| |||||||||   ||||||| ||||||||||  ||||| ||| ||||| |||| |||||||||    
T  26838556 aattacacctttcaacaaatttatttataagattgttatattgtcggtgtcattcaaaaagataaaaatttatat 26838630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 234 - 284
Target Start/End: Complemental strand, 38373950 - 38373901
Alignment:
Q  234 aatgttatattgatggtgttattaaaaaatataagaatttatattatattt 284  Q
    ||||||||||||||||||||||||||||| |||| || | |||||||||||    
T  38373950 aatgttatattgatggtgttattaaaaaa-ataaaaaataatattatattt 38373901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 234 - 284
Target Start/End: Original strand, 46530243 - 46530293
Alignment:
Q  234 aatgttatattgatggtgttattaaaaaatataagaatttatattatattt 284  Q
    |||||||||||| ||||||||||||||||  |||||| || ||||||||||    
T  46530243 aatgttatattgttggtgttattaaaaaagttaagaacttttattatattt 46530293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 234 - 284
Target Start/End: Original strand, 49428591 - 49428641
Alignment:
Q  234 aatgttatattgatggtgttattaaaaaatataagaatttatattatattt 284  Q
    |||||||||||| || ||||||||||||| |||||||||| | ||||||||    
T  49428591 aatgttatattgttgctgttattaaaaaagataagaatttttcttatattt 49428641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 172 - 284
Target Start/End: Original strand, 3806619 - 3806732
Alignment:
Q  172 agagatttttggctgaatttttcatttttctaattacacctttaaacaaatttgcatataagaatgttatattgatggtgttatt-aaaaaatataagaa 270  Q
    ||||| ||| |||||||||||| ||  ||  ||||| ||| |||||||||||| | ||||  ||||||| |||  ||||| |||| |||||| |||||||    
T  3806619 agagactttgggctgaattttttataatttcaattatacccttaaacaaattttcctatattaatgttacattcttggtggtattaaaaaaagataagaa 3806718  T
Q  271 tttatattatattt 284  Q
    ||| ||||||||||    
T  3806719 tttttattatattt 3806732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 203 - 284
Target Start/End: Original strand, 7534030 - 7534111
Alignment:
Q  203 aattacacctttaaacaaatttgcatataagaatgttatattgatggtgttattaaaaaatataagaatttatattatattt 284  Q
    ||||| ||| || ||||||||||  |||||||| | || |||| | ||||| || |||||||||||||| ||||||||||||    
T  7534030 aattatacccttgaacaaatttgtctataagaaagctacattgtttgtgtttttcaaaaatataagaatgtatattatattt 7534111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 254 - 287
Target Start/End: Complemental strand, 8231720 - 8231687
Alignment:
Q  254 attaaaaaatataagaatttatattatattttct 287  Q
    ||||||||| ||||||||||||||||||||||||    
T  8231720 attaaaaaagataagaatttatattatattttct 8231687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 249 - 282
Target Start/End: Complemental strand, 22934608 - 22934575
Alignment:
Q  249 gtgttattaaaaaatataagaatttatattatat 282  Q
    |||||||||||||| |||||||||||||||||||    
T  22934608 gtgttattaaaaaagataagaatttatattatat 22934575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 251 - 284
Target Start/End: Complemental strand, 26495166 - 26495133
Alignment:
Q  251 gttattaaaaaatataagaatttatattatattt 284  Q
    |||||| |||||||||||||||||||||||||||    
T  26495166 gttattgaaaaatataagaatttatattatattt 26495133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 212 - 273
Target Start/End: Original strand, 34666972 - 34667033
Alignment:
Q  212 tttaaacaaatttgcatataagaatgttatattgatggtgttattaaaaaatataagaattt 273  Q
    |||||||||||||   ||||| |||  ||||||| |||||||||||||||| ||||||||||    
T  34666972 tttaaacaaatttttctataataatagtatattgttggtgttattaaaaaagataagaattt 34667033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 234 - 283
Target Start/End: Complemental strand, 35258926 - 35258877
Alignment:
Q  234 aatgttatattgatggtgttattaaaaaatataagaatttatattatatt 283  Q
    |||||||||||| || ||||||| ||||| |||||||||| |||||||||    
T  35258926 aatgttatattgttgatgttattgaaaaagataagaatttttattatatt 35258877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 172 - 284
Target Start/End: Original strand, 37980248 - 37980361
Alignment:
Q  172 agagatttttggctgaatttttcatttttctaattacacctttaaacaaatttgcatataagaatgttatattgatggtgttatt-aaaaaatataagaa 270  Q
    ||||| ||| |||||||||||| ||  || |||||| ||| || ||||||||| | ||||  ||||||| |||  ||||| |||| |||||| |||||||    
T  37980248 agagactttgggctgaattttttataattttaattatacccttcaacaaattttcctatattaatgttacattcttggtggtattaaaaaaagataagaa 37980347  T
Q  271 tttatattatattt 284  Q
    ||| ||||||||||    
T  37980348 tttgtattatattt 37980361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 204 - 268
Target Start/End: Original strand, 10282368 - 10282432
Alignment:
Q  204 attacacctttaaacaaatttgcatataagaatgttatattgatggtgttattaaaaaatataag 268  Q
    |||| ||||||||||||||||   ||||||| |||||||||| || ||| ||| |||||||||||    
T  10282368 attatacctttaaacaaatttatttataagattgttatattgttgatgtcattcaaaaatataag 10282432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 203 - 267
Target Start/End: Original strand, 17035216 - 17035280
Alignment:
Q  203 aattacacctttaaacaaatttgcatataagaatgttatattgatggtgttattaaaaaatataa 267  Q
    ||||| ||| |||||||||| | ||||| | ||| |||||||| |||||||||||||||| ||||    
T  17035216 aattatacccttaaacaaatcttcatatgataatattatattgttggtgttattaaaaaagataa 17035280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 172 - 224
Target Start/End: Complemental strand, 21301874 - 21301822
Alignment:
Q  172 agagatttttggctgaatttttcatttttctaattacacctttaaacaaattt 224  Q
    ||||||||| |||||||||||| ||  ||||||||| ||| ||||||||||||    
T  21301874 agagattttgggctgaattttttataattctaattatacccttaaacaaattt 21301822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 228 - 284
Target Start/End: Complemental strand, 36643646 - 36643590
Alignment:
Q  228 tataagaatgttatattgatggtgttattaaaaaatataagaatttatattatattt 284  Q
    |||||||||||||| ||| |||| | ||| ||||  |||||||||||||||||||||    
T  36643646 tataagaatgttattttgttggtatcattcaaaacgataagaatttatattatattt 36643590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 47; Significance: 1e-17; HSPs: 35)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 230 - 284
Target Start/End: Original strand, 35632987 - 35633041
Alignment:
Q  230 taagaatgttatattgatggtgttattaaaaaatataagaatttatattatattt 284  Q
    |||||||||||| ||| ||||||||||||||||||||||||||||||||||||||    
T  35632987 taagaatgttattttgttggtgttattaaaaaatataagaatttatattatattt 35633041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 199 - 284
Target Start/End: Complemental strand, 4968788 - 4968703
Alignment:
Q  199 ttctaattacacctttaaacaaatttgcatataagaatgttatattgatggtgttattaaaaaatataagaatttatattatattt 284  Q
    ||||||||| || ||||||||||||| | ||||| |||||||||||| |||||||||||| | | |||||||||| | ||||||||    
T  4968788 ttctaattatacttttaaacaaattttcttataataatgttatattgttggtgttattaagatagataagaatttttgttatattt 4968703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 168 - 281
Target Start/End: Complemental strand, 42561766 - 42561653
Alignment:
Q  168 aataagagatttttggctgaatttttcatttttctaattacacctttaaacaaatttgcatataagaatgttatattgatggtgttattaaaaaatataa 267  Q
    ||||||||||||| |||||| ||||||||| ||| |||||  || || |||||||||   ||||| |||||||||||| |||| | ||||||||  ||||    
T  42561766 aataagagattttgggctgactttttcattattccaattattcccttcaacaaatttttctataacaatgttatattgttggtttcattaaaaagcataa 42561667  T
Q  268 gaatttatattata 281  Q
    ||| ||||||||||    
T  42561666 gaaattatattata 42561653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 203 - 277
Target Start/End: Original strand, 40780787 - 40780861
Alignment:
Q  203 aattacacctttaaacaaatttgcatataagaatgttatattgatggtgttattaaaaaatataagaatttatat 277  Q
    ||||||| ||||||| ||||||   ||||| ||| |||||||| |||||||||||||||| ||||||||||||||    
T  40780787 aattacatctttaaataaatttttctataataatattatattgttggtgttattaaaaaagataagaatttatat 40780861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 213 - 282
Target Start/End: Complemental strand, 10428332 - 10428263
Alignment:
Q  213 ttaaacaaatttgcatataagaatgttatattgatggtgttattaaaaaatataagaatttatattatat 282  Q
    |||||||||||||| | |||||||| ||||||| ||||||| || ||||| |||||||||| ||||||||    
T  10428332 ttaaacaaatttgcttttaagaatgctatattgttggtgttcttgaaaaagataagaatttttattatat 10428263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 214 - 283
Target Start/End: Complemental strand, 14487155 - 14487086
Alignment:
Q  214 taaacaaatttgcatataagaatgttatattgatggtgttattaaaaaatataagaatttatattatatt 283  Q
    |||||||||||  |||||| |||||||||||| |||||||||||||||  |||||||||| | |||||||    
T  14487155 taaacaaatttttatataataatgttatattgttggtgttattaaaaaggataagaatttttgttatatt 14487086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 209 - 262
Target Start/End: Complemental strand, 26768247 - 26768194
Alignment:
Q  209 acctttaaacaaatttgcatataagaatgttatattgatggtgttattaaaaaa 262  Q
    |||||||||||||||| | ||||| |||||||||||| ||||||||||||||||    
T  26768247 acctttaaacaaattttcctataacaatgttatattggtggtgttattaaaaaa 26768194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 175 - 292
Target Start/End: Original strand, 27506509 - 27506626
Alignment:
Q  175 gatttttggctgaatttttcatttttctaattacacctttaaacaaatttgcatataa--gaatgttatattgatggtgttattaaaaaatataagaatt 272  Q
    |||||| || || |||||||||||||  ||||| ||| ||||| |||||| | |||||  ||||||||||||| | ||||  || ||||||||||||| |    
T  27506509 gattttggggtgcatttttcattttt--aattatacccttaaataaatttacgtataaaagaatgttatattgttagtgtcgttcaaaaatataagaact 27506606  T
Q  273 tatattatattttctttatt 292  Q
    ||||||||||||||| ||||    
T  27506607 tatattatattttctatatt 27506626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 229 - 285
Target Start/End: Complemental strand, 11067151 - 11067095
Alignment:
Q  229 ataagaatgttatattgatggtgttattaaaaaatataagaatttatattatatttt 285  Q
    |||| |||||||||||| |||||||||||||||| |||||||||| | |||||||||    
T  11067151 ataataatgttatattgttggtgttattaaaaaagataagaatttttgttatatttt 11067095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 228 - 284
Target Start/End: Original strand, 15881346 - 15881402
Alignment:
Q  228 tataagaatgttatattgatggtgttattaaaaaatataagaatttatattatattt 284  Q
    ||||| |||||||||||| |||||| || |||||||||||||||| |||||||||||    
T  15881346 tataataatgttatattgttggtgtcataaaaaaatataagaattaatattatattt 15881402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 188 - 284
Target Start/End: Complemental strand, 42561056 - 42560960
Alignment:
Q  188 atttttcatttttctaattacacctttaaacaaatttgcatataagaatgttatattgatggtgttattaaaaaatataagaatttatattatattt 284  Q
    |||||||||| ||| ||||| ||| ||||||||||||   ||||| |||||||||||| |||||| ||| ||||  | |||| ||||||||||||||    
T  42561056 atttttcattattccaattatacccttaaacaaatttttctataataatgttatattgttggtgtcattgaaaatgacaagagtttatattatattt 42560960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 213 - 284
Target Start/End: Complemental strand, 46738189 - 46738117
Alignment:
Q  213 ttaaacaaatttgcatataagaatgttatattgatggtgttattaaaaa-atataagaatttatattatattt 284  Q
    |||||||||||| | |||||||||||||||||  |  |||||||||||| | |||||||||||||||||||||    
T  46738189 ttaaacaaatttccttataagaatgttatattcttattgttattaaaaacaaataagaatttatattatattt 46738117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 232 - 285
Target Start/End: Original strand, 36564079 - 36564132
Alignment:
Q  232 agaatgttatattgatggtgttattaaaaaatataagaatttatattatatttt 285  Q
    |||||||||| ||| || ||| ||||||||| ||||||||||||||||||||||    
T  36564079 agaatgttattttgttgatgtcattaaaaaaaataagaatttatattatatttt 36564132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 239 - 284
Target Start/End: Complemental strand, 42470453 - 42470408
Alignment:
Q  239 tatattgatggtgttattaaaaaatataagaatttatattatattt 284  Q
    ||||||| || ||| |||||||||||||||||||||||||||||||    
T  42470453 tatattgttgttgtcattaaaaaatataagaatttatattatattt 42470408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 229 - 285
Target Start/End: Original strand, 10427493 - 10427549
Alignment:
Q  229 ataagaatgttatattgatggtgttattaaaaaatataagaatttatattatatttt 285  Q
    ||||||||| ||| ||| || ||| ||||||||| ||||||||||||||||||||||    
T  10427493 ataagaatgctattttgttgatgtcattaaaaaaaataagaatttatattatatttt 10427549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 236 - 284
Target Start/End: Complemental strand, 44717414 - 44717366
Alignment:
Q  236 tgttatattgatggtgttattaaaaaatataagaatttatattatattt 284  Q
    |||||||||| |||||||||||||||| |||||||||| |||| |||||    
T  44717414 tgttatattgttggtgttattaaaaaagataagaatttttattttattt 44717366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 236 - 284
Target Start/End: Complemental strand, 49840534 - 49840486
Alignment:
Q  236 tgttatattgatggtgttattaaaaaatataagaatttatattatattt 284  Q
    |||||||| | |||||| |||||||||||||||||| ||||||||||||    
T  49840534 tgttatatcgttggtgtcattaaaaaatataagaatgtatattatattt 49840486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 218 - 284
Target Start/End: Complemental strand, 10448215 - 10448148
Alignment:
Q  218 caaatttgcatataagaatgttatattgatggtgttattaa-aaaatataagaatttatattatattt 284  Q
    |||||||| ||||||||||| ||| ||| || ||||||||| |||| ||||||||||||| |||||||    
T  10448215 caaatttgaatataagaatgatattttgttgatgttattaaaaaaagataagaatttatactatattt 10448148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 189 - 284
Target Start/End: Original strand, 11080133 - 11080228
Alignment:
Q  189 tttttcatttttctaattacacctttaaacaaatttgcatataagaatgttatattgatggtgttattaaaaaatataagaatttatattatattt 284  Q
    ||||||||| || |||||| | | |||||||| ||| ||||||  ||||||||| || ||||||  || ||||| |||| ||||||||||||||||    
T  11080133 tttttcattattttaattatatccttaaacaatttttcatatactaatgttataatgttggtgtattttaaaaagataataatttatattatattt 11080228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 8 - 66
Target Start/End: Original strand, 12864308 - 12864367
Alignment:
Q  8 tatttaaccactttatagttaca-acttgctaaaatactcctttgaaaaaatgagtgggt 66  Q
    |||||||||||||| ||||||   |||||||||||||||||||| ||||||| |||||||    
T  12864308 tatttaaccactttttagttattcacttgctaaaatactccttttaaaaaataagtgggt 12864367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 205 - 284
Target Start/End: Complemental strand, 35056278 - 35056199
Alignment:
Q  205 ttacacctttaaacaaatttgcatataagaatgttatattgatggtgttattaaaaaatataagaatttatattatattt 284  Q
    ||||||| ||||||||||||   ||||| | |||||||||| || ||| ||||||| | |||||||||||||| ||||||    
T  35056278 ttacaccgttaaacaaattttgctataatagtgttatattgttgttgtcattaaaataaataagaatttatatcatattt 35056199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 213 - 279
Target Start/End: Complemental strand, 6294743 - 6294677
Alignment:
Q  213 ttaaacaaatttgcatataagaatgttatattgatggtgttattaaaaaatataagaatttatatta 279  Q
    ||||| ||||| || ||||||||| | |||||| | |||| | ||||||||||||||||||||||||    
T  6294743 ttaaataaattcgcctataagaatataatattgttagtgtcaataaaaaatataagaatttatatta 6294677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 234 - 284
Target Start/End: Original strand, 33129428 - 33129478
Alignment:
Q  234 aatgttatattgatggtgttattaaaaaatataagaatttatattatattt 284  Q
    ||||||||| || | |||||||||||||| || ||||||||||||||||||    
T  33129428 aatgttatagtgtttgtgttattaaaaaagatgagaatttatattatattt 33129478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 8 - 66
Target Start/End: Complemental strand, 34515299 - 34515241
Alignment:
Q  8 tatttaaccactttatagttacaacttgctaaaatactcctttgaaaaaatgagtgggt 66  Q
    |||||||| ||||| |||||| |||||||||||| || ||||| ||||||| |||||||    
T  34515299 tatttaactactttttagttataacttgctaaaacacaccttttaaaaaataagtgggt 34515241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 8 - 66
Target Start/End: Complemental strand, 36389627 - 36389569
Alignment:
Q  8 tatttaaccactttatagttacaacttgctaaaatactcctttgaaaaaatgagtgggt 66  Q
    |||||||| ||||| |||||| |||||||||||| || ||||| ||||||| |||||||    
T  36389627 tatttaactactttttagttataacttgctaaaacacaccttttaaaaaataagtgggt 36389569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 214 - 280
Target Start/End: Original strand, 36528944 - 36529010
Alignment:
Q  214 taaacaaatttgcatataagaatgttatattgatggtgttattaaaaaatataagaatttatattat 280  Q
    |||| |||||||||||||| ||| |||||||  || | ||||| ||||| |||||||||||||||||    
T  36528944 taaataaatttgcatataaaaatattatatttttgttattattcaaaaagataagaatttatattat 36529010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 228 - 282
Target Start/End: Original strand, 39729402 - 39729456
Alignment:
Q  228 tataagaatgttatattgatggtgttattaaaaaatataagaatttatattatat 282  Q
    ||||||||| |||||||  |||||| ||| ||||| |||||||||||||||||||    
T  39729402 tataagaatattatatttttggtgtcatttaaaaagataagaatttatattatat 39729456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 231 - 281
Target Start/End: Original strand, 42825193 - 42825243
Alignment:
Q  231 aagaatgttatattgatggtgttattaaaaaatataagaatttatattata 281  Q
    ||||||||||||||| | || ||||||||||| |||| |||||||||||||    
T  42825193 aagaatgttatattgtttgtattattaaaaaagataataatttatattata 42825243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 228 - 282
Target Start/End: Complemental strand, 49222692 - 49222638
Alignment:
Q  228 tataagaatgttatattgatggtgttattaaaaaatataagaatttatattatat 282  Q
    ||||||||| |||||||  ||||||  |||||||| |||||||||||||||||||    
T  49222692 tataagaatattatatttttggtgtctttaaaaaagataagaatttatattatat 49222638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 209 - 286
Target Start/End: Original strand, 25788695 - 25788772
Alignment:
Q  209 acctttaaacaaatttgcatataagaatgttatattgatggtgttattaaaaaatataagaatttatattatattttc 286  Q
    ||||||||||||||||   ||||| ||| |||||||| |||||| | | ||||  |||||| ||||||||||||||||    
T  25788695 acctttaaacaaatttttctataataatattatattgttggtgtcaattaaaatgataagagtttatattatattttc 25788772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 203 - 284
Target Start/End: Original strand, 38340089 - 38340170
Alignment:
Q  203 aattacacctttaaacaaatttgcatataagaatgttatattgatggtgttattaaaaaatataagaatttatattatattt 284  Q
    ||||| ||| || |||| |||| | ||||| || ||||||||  |||||||||||||||| |||||||||| ||||| ||||    
T  38340089 aattatacccttcaacatattttcctataataaagttatattattggtgttattaaaaaagataagaatttttattacattt 38340170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 228 - 284
Target Start/End: Original strand, 4790240 - 4790296
Alignment:
Q  228 tataagaatgttatattgatggtgttattaaaaaatataagaatttatattatattt 284  Q
    |||||||||| |||  || |||||||| |||||||||||| ||||||||||| ||||    
T  4790240 tataagaatgctattatgttggtgttaataaaaaatataaaaatttatattaaattt 4790296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 228 - 284
Target Start/End: Original strand, 21966246 - 21966302
Alignment:
Q  228 tataagaatgttatattgatggtgttattaaaaaatataagaatttatattatattt 284  Q
    ||||||||| | |||||  |||||| ||| ||||| |||||||||||||||||||||    
T  21966246 tataagaatatcatatttttggtgtcattcaaaaagataagaatttatattatattt 21966302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 182 - 282
Target Start/End: Complemental strand, 38339942 - 38339842
Alignment:
Q  182 ggctgaatttttcatttttctaattacacctttaaacaaatttgcatataagaatgttatattgatggtgttattaaaaaatataagaatttatattata 281  Q
    ||||||| |||| ||  ||| ||||| ||| |||| ||||||| | ||||  |||||||||||  ||||| |||||||||| ||||  ||||||||||||    
T  38339942 ggctgaactttttataattccaattatacccttaatcaaattttcctatattaatgttatattattggtggtattaaaaaagataaagatttatattata 38339843  T
Q  282 t 282  Q
    |    
T  38339842 t 38339842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 212 - 280
Target Start/End: Complemental strand, 50942438 - 50942370
Alignment:
Q  212 tttaaacaaatttgcatataagaatgttatattgatggtgttattaaaaaatataagaatttatattat 280  Q
    |||||||||||||   ||||  |||||||||||  ||||  |||||||||| |||||||||||||||||    
T  50942438 tttaaacaaattttactatattaatgttatattattggtagtattaaaaaagataagaatttatattat 50942370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 45; Significance: 2e-16; HSPs: 28)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 176 - 280
Target Start/End: Complemental strand, 20469685 - 20469581
Alignment:
Q  176 atttttggctgaatttttcatttttctaattacacctttaaacaaatttgcatataagaatgttatattgatggtgttattaaaaaatataagaatttat 275  Q
    ||||| |||||||||||| ||  ||| ||||| ||| |||||||||||| | ||||  |||||||||||| ||||| |||||||||| ||||| ||||||    
T  20469685 attttaggctgaattttttataattccaattatacccttaaacaaattttcctatattaatgttatattgttggtggtattaaaaaagataaggatttat 20469586  T
Q  276 attat 280  Q
    |||||    
T  20469585 attat 20469581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 187 - 284
Target Start/End: Complemental strand, 4119222 - 4119125
Alignment:
Q  187 aatttttcatttttctaattacacctttaaacaaatttgcatataagaatgttatattgatggtgttattaaaaaatataagaatttatattatattt 284  Q
    ||||||||||||||||||||| ||| ||||||||||||   ||||| |||| | ||||| | |||| ||||||||| || |||||||||||| |||||    
T  4119222 aatttttcatttttctaattatacccttaaacaaattttgttataataatgctttattgtttgtgtcattaaaaaagattagaatttatattgtattt 4119125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 228 - 284
Target Start/End: Complemental strand, 8866928 - 8866872
Alignment:
Q  228 tataagaatgttatattgatggtgttattaaaaaatataagaatttatattatattt 284  Q
    |||||||||||| ||||| |||||| ||||||||| |||||||||||||||||||||    
T  8866928 tataagaatgttttattgttggtgtcattaaaaaagataagaatttatattatattt 8866872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 173 - 285
Target Start/End: Complemental strand, 34672706 - 34672594
Alignment:
Q  173 gagatttttggctgaatttttcatttttctaattacacctttaaacaaatttgcatataagaatgttatattgatggtgttattaaaaaatataagaatt 272  Q
    |||||||||| |||||||||| ||  ||| ||||| ||| ||||| ||||||   ||||  |||||||||||| || || |||||||||  |||||||||    
T  34672706 gagatttttgactgaattttttataattccaattatacccttaaataaatttttttatattaatgttatattgttgatgatattaaaaatgataagaatt 34672607  T
Q  273 tatattatatttt 285  Q
    |||||||||||||    
T  34672606 tatattatatttt 34672594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 228 - 283
Target Start/End: Complemental strand, 8872619 - 8872564
Alignment:
Q  228 tataagaatgttatattgatggtgttattaaaaaatataagaatttatattatatt 283  Q
    |||||||||||| ||||| |||||| ||||||||| ||||||||||||||||||||    
T  8872619 tataagaatgttttattgttggtgtcattaaaaaagataagaatttatattatatt 8872564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 203 - 281
Target Start/End: Complemental strand, 33803973 - 33803894
Alignment:
Q  203 aattacacctttaaacaaatttgcatataagaatgttatattgatggtgttatt-aaaaaatataagaatttatattata 281  Q
    ||||| ||| |||| ||||| |||||||||||||| ||||||| |||||| ||| |||||| ||||||||||||||||||    
T  33803973 aattatacccttaatcaaatatgcatataagaatgctatattgttggtgtcattaaaaaaagataagaatttatattata 33803894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 182 - 284
Target Start/End: Original strand, 8478930 - 8479032
Alignment:
Q  182 ggctgaatttttcatttttctaattacacctttaaacaaatttgcatataagaatgttatattgatggtgttattaaaaaatataagaatttatattata 281  Q
    |||||||||||||||| ||| || ||  || |||||||||||||| | | ||||  |||||||| || ||||| | |||||||||||||||| |||||||    
T  8478930 ggctgaatttttcattattccaaataagcccttaaacaaatttgctttttagaagtttatattgttgatgttaatgaaaaatataagaatttttattata 8479029  T
Q  282 ttt 284  Q
    |||    
T  8479030 ttt 8479032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 199 - 284
Target Start/End: Complemental strand, 32279704 - 32279619
Alignment:
Q  199 ttctaattacacctttaaacaaatttgcatataagaatgttatattgatggtgttattaaaaaatataagaatttatattatattt 284  Q
    ||||||||| | | |||| ||||||||   |||| |||||||| ||| |||||| ||||||||| |||||||||||||||||||||    
T  32279704 ttctaattatatccttaagcaaatttgaccataaaaatgttattttgttggtgtcattaaaaaagataagaatttatattatattt 32279619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 229 - 284
Target Start/End: Complemental strand, 22793744 - 22793689
Alignment:
Q  229 ataagaatgttatattgatggtgttattaaaaaatataagaatttatattatattt 284  Q
    |||| |||||||||||| |||||||||| ||||| |||||||||| ||||||||||    
T  22793744 ataataatgttatattgttggtgttatttaaaaagataagaatttttattatattt 22793689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 203 - 285
Target Start/End: Original strand, 3533205 - 3533286
Alignment:
Q  203 aattacacctttaaacaaatttgcatataagaatgttatattgatggtgttattaaaaaatataagaatttatattatatttt 285  Q
    ||||| ||| ||||||||||||   ||||| ||| |||||||| |||||||||||||||| ||||||| | ||||||||||||    
T  3533205 aattagacccttaaacaaatttttctataa-aatattatattgttggtgttattaaaaaaaataagaaatcatattatatttt 3533286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 173 - 275
Target Start/End: Original strand, 11734171 - 11734273
Alignment:
Q  173 gagatttttggctgaatttttcatttttctaattacacctttaaacaaatttgcatataagaatgttatattgatggtgttattaaaaaatataagaatt 272  Q
    |||||||| |||||||||||| ||  ||| | ||| ||||||||| |||||| | ||||  |||||||||||| ||||| |||| ||||  |||||||||    
T  11734171 gagattttgggctgaattttttataattccagttatacctttaaataaattttcctatattaatgttatattgttggtggtatttaaaaggataagaatt 11734270  T
Q  273 tat 275  Q
    |||    
T  11734271 tat 11734273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 254 - 292
Target Start/End: Complemental strand, 23649926 - 23649888
Alignment:
Q  254 attaaaaaatataagaatttatattatattttctttatt 292  Q
    |||||||||||||||||||||||||||||||||| ||||    
T  23649926 attaaaaaatataagaatttatattatattttctatatt 23649888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 229 - 273
Target Start/End: Original strand, 32938876 - 32938920
Alignment:
Q  229 ataagaatgttatattgatggtgttattaaaaaatataagaattt 273  Q
    |||| |||||||||||| |||||| ||||||||||||||||||||    
T  32938876 ataataatgttatattgttggtgtcattaaaaaatataagaattt 32938920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 228 - 284
Target Start/End: Original strand, 32939274 - 32939330
Alignment:
Q  228 tataagaatgttatattgatggtgttattaaaaaatataagaatttatattatattt 284  Q
    ||||| ||||| |||||| |||||||||||||||  |||||||||| ||||||||||    
T  32939274 tataataatgtcatattggtggtgttattaaaaaggataagaatttttattatattt 32939330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 202 - 284
Target Start/End: Complemental strand, 10129787 - 10129704
Alignment:
Q  202 taattacacctttaaacaaatttgcatataagaatgttatattgatggtgttattaaaaaat-ataagaatttatattatattt 284  Q
    |||||| ||| |||||||||||||  ||||| || | ||||| | | |||| |||||||||| |||||||||||||||||||||    
T  10129787 taattatacccttaaacaaatttgtgtataaaaaggctatatagttagtgtcattaaaaaattataagaatttatattatattt 10129704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 178 - 285
Target Start/End: Original strand, 31383393 - 31383499
Alignment:
Q  178 ttttggctgaatttttcatttttctaattacacctttaaacaaatttgcatataagaatgttatattgatggtgttattaaaaaatataagaatttatat 277  Q
    |||||||||| ||||| ||  ||| ||||| ||  |||||||||||| | ||||  |||||||||||| ||||| |||||||||| ||||| || |||||    
T  31383393 ttttggctgatttttttataattccaattatacacttaaacaaattttc-tatattaatgttatattgttggtggtattaaaaaagataaggatatatat 31383491  T
Q  278 tatatttt 285  Q
    ||| ||||    
T  31383492 tatttttt 31383499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 234 - 284
Target Start/End: Original strand, 4920803 - 4920853
Alignment:
Q  234 aatgttatattgatggtgttattaaaaaatataagaatttatattatattt 284  Q
    |||||||||||| |||||||||||||||| |||||||| | | ||||||||    
T  4920803 aatgttatattgttggtgttattaaaaaagataagaatatttgttatattt 4920853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 228 - 282
Target Start/End: Original strand, 5414759 - 5414813
Alignment:
Q  228 tataagaatgttatattgatggtgttattaaaaaatataagaatttatattatat 282  Q
    ||||||||| | |||||  |||||||||| ||||| |||||||||||||||||||    
T  5414759 tataagaatatcatatttttggtgttatttaaaaagataagaatttatattatat 5414813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 234 - 284
Target Start/End: Original strand, 17321894 - 17321944
Alignment:
Q  234 aatgttatattgatggtgttattaaaaaatataagaatttatattatattt 284  Q
    ||||||||| || ||||| |||||||||| ||||| |||||||||||||||    
T  17321894 aatgttataatgctggtggtattaaaaaagataagtatttatattatattt 17321944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 214 - 284
Target Start/End: Complemental strand, 32799529 - 32799459
Alignment:
Q  214 taaacaaatttgcatataagaatgttatattgatggtgttattaaaaaatataagaatttatattatattt 284  Q
    ||||||||||| | |||||||||||||||||| || ||  ||| ||||| |||| ||| ||||||||||||    
T  32799529 taaacaaatttacttataagaatgttatattgttgatgacattcaaaaagataaaaatctatattatattt 32799459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 212 - 273
Target Start/End: Complemental strand, 2536630 - 2536569
Alignment:
Q  212 tttaaacaaatttgcatataagaatgttatattgatggtgttattaaaaaatataagaattt 273  Q
    |||||||||||||   ||||| ||| |||||||| || ||||||||||||| ||||||||||    
T  2536630 tttaaacaaatttttctataataatattatattgttgttgttattaaaaaagataagaattt 2536569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 203 - 284
Target Start/End: Original strand, 7980484 - 7980565
Alignment:
Q  203 aattacacctttaaacaaatttgcatataagaatgttatattgatggtgttattaaaaaatataagaatttatattatattt 284  Q
    ||||| ||| ||||| |||||||| | ||| || |  |||||| |||| ||||||||||| |||||||||| ||||||||||    
T  7980484 aattatacccttaaataaatttgcttttaaaaacgcgatattgttggttttattaaaaaagataagaatttttattatattt 7980565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 172 - 284
Target Start/End: Original strand, 13846493 - 13846606
Alignment:
Q  172 agagatttttggctgaatttttcatttttctaattacacctttaaacaaatttgcatataagaatgttatattgatggtgttatt-aaaaaatataagaa 270  Q
    ||||| ||| |||||||||||| ||  ||  ||||| ||| |||||||||||| | ||||  ||||||| |||  ||||| |||| |||||| |||||||    
T  13846493 agagactttgggctgaattttttataatttaaattataccattaaacaaattttcctatattaatgttacattcttggtggtattaaaaaaagataagaa 13846592  T
Q  271 tttatattatattt 284  Q
    ||| ||||||||||    
T  13846593 tttgtattatattt 13846606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 239 - 284
Target Start/End: Complemental strand, 14356722 - 14356677
Alignment:
Q  239 tatattgatggtgttattaaaaaatataagaatttatattatattt 284  Q
    ||||||| | || ||||| |||||||||||||||||||||||||||    
T  14356722 tatattgtttgtattattgaaaaatataagaatttatattatattt 14356677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 255 - 292
Target Start/End: Complemental strand, 16436951 - 16436914
Alignment:
Q  255 ttaaaaaatataagaatttatattatattttctttatt 292  Q
    |||||||| |||||||||||||||||||||||| ||||    
T  16436951 ttaaaaaagataagaatttatattatattttctatatt 16436914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 239 - 284
Target Start/End: Original strand, 32937782 - 32937827
Alignment:
Q  239 tatattgatggtgttattaaaaaatataagaatttatattatattt 284  Q
    ||||||| |||||||| |||||||  ||||||||||||||||||||    
T  32937782 tatattgttggtgttactaaaaaaggtaagaatttatattatattt 32937827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 214 - 285
Target Start/End: Complemental strand, 13704112 - 13704040
Alignment:
Q  214 taaacaaatttgcatataagaatgttatattgatggtgttattaaaaaatat-aagaatttatattatatttt 285  Q
    ||||||||||| | ||||||||||  | |||| || ||||||| |||||||| || |||||||||||||||||    
T  13704112 taaacaaattttcctataagaatgccacattgttgatgttattcaaaaatataaaaaatttatattatatttt 13704040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 203 - 279
Target Start/End: Complemental strand, 14224647 - 14224571
Alignment:
Q  203 aattacacctttaaacaaatttgcatataagaatgttatattgatggtgttattaaaaaatataagaatttatatta 279  Q
    ||||| ||| ||||| |||||||||| |||||||  ||||||| || | | ||| |||||||||||||||| |||||    
T  14224647 aattataccattaaataaatttgcatgtaagaataatatattgttgatatcatttaaaaatataagaatttgtatta 14224571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 43)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 202 - 284
Target Start/End: Original strand, 47393532 - 47393614
Alignment:
Q  202 taattacacctttaaacaaatttgcatataagaatgttatattgatggtgttattaaaaaatataagaatttatattatattt 284  Q
    |||||| | ||||||||||| || | ||||| |||||||||||| |||||| ||| ||||||||||||| |||||||||||||    
T  47393532 taattatatctttaaacaaaatttcttataaaaatgttatattgttggtgtcattcaaaaatataagaaattatattatattt 47393614  T

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Target: chr4; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 213 - 282
Target Start/End: Complemental strand, 6028697 - 6028628
Alignment:
Q  213 ttaaacaaatttgcatataagaatgttatattgatggtgttattaaaaaatataagaatttatattatat 282  Q
    |||||||||||| |||| ||||||| ||||||  |||||| ||||||||| |||||||||||||||||||    
T  6028697 ttaaacaaattttcatacaagaatgctatatttttggtgtcattaaaaaagataagaatttatattatat 6028628  T

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Target: chr4; HSP #3
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 200 - 284
Target Start/End: Original strand, 3092357 - 3092441
Alignment:
Q  200 tctaattacacctttaaacaaatttgcatataagaatgttatattgatggtgttattaaaaaatataagaatttatattatattt 284  Q
    ||||||||||||||||| ||||||||| ||| | |||||||||||| || ||| ||||||||| |||| |||||| ||| |||||    
T  3092357 tctaattacacctttaagcaaatttgcctatgaaaatgttatattgttgatgtaattaaaaaagataaaaatttagattgtattt 3092441  T

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Target: chr4; HSP #4
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 213 - 285
Target Start/End: Original strand, 24670081 - 24670153
Alignment:
Q  213 ttaaacaaatttgcatataagaatgttatattgatggtgttattaaaaaatataagaatttatattatatttt 285  Q
    |||||||||||||  |||||||||||||||||  |  ||||||| ||||| ||||||||||||||||||||||    
T  24670081 ttaaacaaatttgtctataagaatgttatattttttatgttatttaaaaagataagaatttatattatatttt 24670153  T

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Target: chr4; HSP #5
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 203 - 283
Target Start/End: Complemental strand, 47044923 - 47044843
Alignment:
Q  203 aattacacctttaaacaaatttgcatataagaatgttatattgatggtgttattaaaaaatataagaatttatattatatt 283  Q
    ||||| ||| || ||||||||||  |||||||||||||| ||| |||||||||| ||||| ||||||||||| ||||||||    
T  47044923 aattatacccttgaacaaatttgattataagaatgttattttgctggtgttattgaaaaagataagaatttaaattatatt 47044843  T

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Target: chr4; HSP #6
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 177 - 284
Target Start/End: Complemental strand, 10214435 - 10214329
Alignment:
Q  177 tttttggctgaatttttcatttttctaattacacctttaaacaaatttgcatataagaatgttatattgatggtgttattaaaaaatataagaatttata 276  Q
    |||| ||||||||||||| |  ||| ||||| ||| ||||| |||||||  |||||||||||||| ||| |||||| ||| ||| |||||||||||| ||    
T  10214435 ttttgggctgaatttttc-tccttccaattatacccttaaataaatttgactataagaatgttattttgttggtgtcattcaaatatataagaatttgta 10214337  T
Q  277 ttatattt 284  Q
    ||||||||    
T  10214336 ttatattt 10214329  T

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Target: chr4; HSP #7
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 211 - 292
Target Start/End: Original strand, 24610612 - 24610690
Alignment:
Q  211 ctttaaacaaatttgcatataagaatgttatattgatggtgttattaaaaaatataagaatttatattatattttctttatt 292  Q
    |||||||||||||||| ||||| |||||||||||| || |   ||| |||||||||||||||| ||||||||||||| ||||    
T  24610612 ctttaaacaaatttgcctataaaaatgttatattgttgct---attcaaaaatataagaatttgtattatattttctatatt 24610690  T

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Target: chr4; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 213 - 284
Target Start/End: Original strand, 55109867 - 55109938
Alignment:
Q  213 ttaaacaaatttgcatataagaatgttatattgatggtgttattaaaaaatataagaatttatattatattt 284  Q
    ||||| |||||||  |||||||||||||| ||| |||||||| ||||||  |||||||||||||||||||||    
T  55109867 ttaaataaatttgattataagaatgttattttgttggtgttactaaaaataataagaatttatattatattt 55109938  T

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Target: chr4; HSP #9
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 238 - 292
Target Start/End: Original strand, 1237529 - 1237583
Alignment:
Q  238 ttatattgatggtgttattaaaaaatataagaatttatattatattttctttatt 292  Q
    |||||||| |||||| ||||||||| |||||||||||||||||||||||| ||||    
T  1237529 ttatattgttggtgtcattaaaaaagataagaatttatattatattttctatatt 1237583  T

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Target: chr4; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 176 - 285
Target Start/End: Complemental strand, 32820146 - 32820037
Alignment:
Q  176 atttttggctgaatttttcatttttctaattacacctttaaacaaatttgcatataagaatgttatattgatggtgttattaaaaaatataagaatttat 275  Q
    ||||| ||||||  |||| ||| ||||||||| || |||||| ||||||   ||||   ||||||||||  |||||||||||||||| |||| |||||||    
T  32820146 attttgggctgatatttttattattctaattatacttttaaataaatttttctatactgatgttatatttttggtgttattaaaaaagataaaaatttat 32820047  T
Q  276 attatatttt 285  Q
    ||||||||||    
T  32820046 attatatttt 32820037  T

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Target: chr4; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 203 - 284
Target Start/End: Original strand, 46058383 - 46058464
Alignment:
Q  203 aattacacctttaaacaaatttgcatataagaatgttatattgatggtgttattaaaaaatataagaatttatattatattt 284  Q
    ||||| || ||||||||||||||||||||| |||| || |||| |||||  ||| |||||||||| | ||||||||||||||    
T  46058383 aattatacttttaaacaaatttgcatataaaaatgatacattgttggtgccattcaaaaatataaaagtttatattatattt 46058464  T

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Target: chr4; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 203 - 284
Target Start/End: Original strand, 48458024 - 48458105
Alignment:
Q  203 aattacacctttaaacaaatttgcatataagaatgttatattgatggtgttattaaaaaatataagaatttatattatattt 284  Q
    ||||| ||||||||| ||| |||  |||||||||| ||| ||| | |||||||||||||| |||||| ||||||||||||||    
T  48458024 aattatacctttaaaaaaacttgactataagaatgctattttgtttgtgttattaaaaaagataagactttatattatattt 48458105  T

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Target: chr4; HSP #13
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 233 - 292
Target Start/End: Original strand, 44857455 - 44857514
Alignment:
Q  233 gaatgttatattgatggtgttattaaaaaatataagaatttatattatattttctttatt 292  Q
    |||||||||||||  ||||||| ||||||| ||||||||||||||||||| | |||||||    
T  44857455 gaatgttatattgtcggtgttactaaaaaaaataagaatttatattatatatgctttatt 44857514  T

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Target: chr4; HSP #14
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 229 - 284
Target Start/End: Complemental strand, 56084855 - 56084800
Alignment:
Q  229 ataagaatgttatattgatggtgttattaaaaaatataagaatttatattatattt 284  Q
    |||| |||||||||||| |||||||||||||||| | |||||||| ||||||||||    
T  56084855 ataataatgttatattgttggtgttattaaaaaagaaaagaatttgtattatattt 56084800  T

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Target: chr4; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 203 - 273
Target Start/End: Original strand, 6484712 - 6484782
Alignment:
Q  203 aattacacctttaaacaaatttgcatataagaatgttatattgatggtgttattaaaaaatataagaattt 273  Q
    ||||| ||| |||||||||||||||||||| |||  ||||||  |||||| ||| ||||||||||||||||    
T  6484712 aattatacccttaaacaaatttgcatataataattatatattattggtgtcattcaaaaatataagaattt 6484782  T

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Target: chr4; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 234 - 284
Target Start/End: Complemental strand, 20004833 - 20004783
Alignment:
Q  234 aatgttatattgatggtgttattaaaaaatataagaatttatattatattt 284  Q
    |||| ||| ||| |||||| |||||||||||||||||||||||||||||||    
T  20004833 aatgctattttgttggtgtcattaaaaaatataagaatttatattatattt 20004783  T

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Target: chr4; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 189 - 283
Target Start/End: Complemental strand, 27746778 - 27746684
Alignment:
Q  189 tttttcatttttctaattacacctttaaacaaatttgcatataagaatgttatattgatggtgttattaaaaaatataagaatttatattatatt 283  Q
    ||||||||| ||| | ||| ||| |||||||||||  | || || |||||||||||  |||||| ||| ||||| ||||||||||||||||||||    
T  27746778 tttttcattcttccagttatacccttaaacaaattcacctacaataatgttatattattggtgtcattgaaaaagataagaatttatattatatt 27746684  T

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Target: chr4; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 199 - 284
Target Start/End: Complemental strand, 28704122 - 28704036
Alignment:
Q  199 ttctaattacacctttaaacaaa-tttgcatataagaatgttatattgatggtgttattaaaaaatataagaatttatattatattt 284  Q
    |||||| || ||| ||||||||| ||| | |||||||||| ||||||| |||||| ||||||||| || ||||||||||| ||||||    
T  28704122 ttctaaatatacccttaaacaaaatttacttataagaatgctatattgttggtgtcattaaaaaagatgagaatttatataatattt 28704036  T

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Target: chr4; HSP #19
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 203 - 283
Target Start/End: Original strand, 4815870 - 4815951
Alignment:
Q  203 aattacacctttaaacaaatttgcatataagaatgttatattgatggtgttattaaaaaata-taagaatttatattatatt 283  Q
    ||||| ||| |||| ||||||| | ||||| |||||||||||| |||||||||||||||| | ||||||||| | |||||||    
T  4815870 aattatacccttaagcaaattttcgtataataatgttatattgttggtgttattaaaaaagattaagaatttttgttatatt 4815951  T

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Target: chr4; HSP #20
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 244 - 285
Target Start/End: Complemental strand, 8897453 - 8897412
Alignment:
Q  244 tgatggtgttattaaaaaatataagaatttatattatatttt 285  Q
    ||||||||| ||||||||| ||||||||||||||||||||||    
T  8897453 tgatggtgtcattaaaaaaaataagaatttatattatatttt 8897412  T

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Target: chr4; HSP #21
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 213 - 262
Target Start/End: Original strand, 12294314 - 12294363
Alignment:
Q  213 ttaaacaaatttgcatataagaatgttatattgatggtgttattaaaaaa 262  Q
    |||||||||||| ||||||| ||| |||||||| ||||||||||||||||    
T  12294314 ttaaacaaattttcatataataatattatattgttggtgttattaaaaaa 12294363  T

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Target: chr4; HSP #22
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 172 - 284
Target Start/End: Original strand, 23315858 - 23315971
Alignment:
Q  172 agagatttttggctgaatttttcatttttctaattacacctttaaacaaatttgcatataagaatgttatattgatggtgttattaaaaaat-ataagaa 270  Q
    ||||| ||| |||||||||||| ||  ||  ||||| ||| |||||||||||| | ||||  ||||||| |||  ||||| ||||||||||  |||||||    
T  23315858 agagactttgggctgaattttttataatttcaattatacccttaaacaaattttcctatattaatgttacattcttggtggtattaaaaaaagataagaa 23315957  T
Q  271 tttatattatattt 284  Q
    ||||||||||||||    
T  23315958 tttatattatattt 23315971  T

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Target: chr4; HSP #23
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 215 - 284
Target Start/End: Original strand, 48171785 - 48171854
Alignment:
Q  215 aaacaaatttgcatataagaatgttatattgatggtgttattaaaaaatataagaatttatattatattt 284  Q
    ||||||||||   ||||| |||||||||||  |||||| |||||||||||||||||||| | ||||||||    
T  48171785 aaacaaatttttctataataatgttatattattggtgtaattaaaaaatataagaatttttgttatattt 48171854  T

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Target: chr4; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 169 - 245
Target Start/End: Complemental strand, 32640037 - 32639961
Alignment:
Q  169 ataagagatttttggctgaatttttcatttttctaattacacctttaaacaaatttgcatataagaatgttatattg 245  Q
    |||||||||||  || ||||||||||||| ||| ||||||| ||||||| ||||||   ||||| ||||||||||||    
T  32640037 ataagagatttcaggttgaatttttcattattcaaattacatctttaaataaatttttctataataatgttatattg 32639961  T

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Target: chr4; HSP #25
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 210 - 284
Target Start/End: Original strand, 22160347 - 22160422
Alignment:
Q  210 cctttaaacaaatttgcatataagaatgttatattgatggtgttattaaaaaat-ataagaatttatattatattt 284  Q
    ||||||||||||||| | ||||  ||||||| |||  ||||| ||||||||||  |||||||||||||||||||||    
T  22160347 cctttaaacaaattttcctatattaatgttacatttttggtggtattaaaaaaagataagaatttatattatattt 22160422  T

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Target: chr4; HSP #26
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 213 - 284
Target Start/End: Original strand, 26067243 - 26067313
Alignment:
Q  213 ttaaacaaatttgcatataagaatgttatattgatggtgttattaaaaaatataagaatttatattatattt 284  Q
    ||||||||| |||| |||||||||| ||| ||| || ||| |||| |||||||| |||||||||||||||||    
T  26067243 ttaaacaaacttgcctataagaatgctat-ttgttgatgtcattacaaaatatatgaatttatattatattt 26067313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 213 - 284
Target Start/End: Original strand, 26492362 - 26492433
Alignment:
Q  213 ttaaacaaatttgcatataagaatgttatattgatggtgttattaaaaaatataagaatttatattatattt 284  Q
    |||||||||||| | ||||  |||||||||||| ||||| | |||||||| ||||| ||||||| |||||||    
T  26492362 ttaaacaaattttcctatattaatgttatattgttggtggtgttaaaaaagataaggatttatactatattt 26492433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 213 - 284
Target Start/End: Complemental strand, 28715482 - 28715411
Alignment:
Q  213 ttaaacaaatttgcatataagaatgttatattgatggtgttattaaaaaatataagaatttatattatattt 284  Q
    |||||||||||||| ||||| |||||||||||  ||||||  || ||| | |||||||||||||||| ||||    
T  28715482 ttaaacaaatttgcttataaaaatgttatattattggtgtctttcaaacagataagaatttatattacattt 28715411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 228 - 282
Target Start/End: Original strand, 10582090 - 10582144
Alignment:
Q  228 tataagaatgttatattgatggtgttattaaaaaatataagaatttatattatat 282  Q
    ||||||||| | |||||  |||||| ||| |||||||||||||||||||||||||    
T  10582090 tataagaatatcatatttttggtgtcatttaaaaatataagaatttatattatat 10582144  T

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Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 234 - 284
Target Start/End: Complemental strand, 19554872 - 19554822
Alignment:
Q  234 aatgttatattgatggtgttattaaaaaatataagaatttatattatattt 284  Q
    |||||||||||| ||||| |||||||||| | ||| |||||||||||||||    
T  19554872 aatgttatattgttggtgatattaaaaaaaaaaaggatttatattatattt 19554822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 254 - 284
Target Start/End: Original strand, 26108865 - 26108895
Alignment:
Q  254 attaaaaaatataagaatttatattatattt 284  Q
    |||||||||||||||||||||||||||||||    
T  26108865 attaaaaaatataagaatttatattatattt 26108895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 219 - 284
Target Start/End: Complemental strand, 32204247 - 32204184
Alignment:
Q  219 aaatttgcatataagaatgttatattgatggtgttattaaaaaatataagaatttatattatattt 284  Q
    |||||| ||||||| |||||||||||| |||| ||||||||||  |||||||||| | ||||||||    
T  32204247 aaattttcatataataatgttatattgttggtattattaaaaa--ataagaatttttgttatattt 32204184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 213 - 284
Target Start/End: Complemental strand, 33389979 - 33389904
Alignment:
Q  213 ttaaacaaatttgcatataagaatgttatattgatggtgttattaa----aaaatataagaatttatattatattt 284  Q
    |||||||||||||  ||||| ||| |||| ||| ||||||||||||    |||| |||||||||||||||||||||    
T  33389979 ttaaacaaatttgattataaaaatattattttgttggtgttattaattcaaaaagataagaatttatattatattt 33389904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 199 - 281
Target Start/End: Original strand, 39678076 - 39678158
Alignment:
Q  199 ttctaattacacctttaaacaaatttgcatataagaatgttatattgatggtgttattaaaaaatataagaatttatattata 281  Q
    ||||||||| ||||||||||||| |||  || ||||||||||||||  |||||| |||  |||  |||| |||||||||||||    
T  39678076 ttctaattatacctttaaacaaaattgtctacaagaatgttatatttttggtgtcattctaaatgataaaaatttatattata 39678158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 8 - 66
Target Start/End: Complemental strand, 52437608 - 52437550
Alignment:
Q  8 tatttaaccactttatagttacaacttgctaaaatactcctttgaaaaaatgagtgggt 66  Q
    |||||||||||||| |||||| |||||||||||| || ||||  ||||||| |||||||    
T  52437608 tatttaaccactttttagttataacttgctaaaacacaccttctaaaaaataagtgggt 52437550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 177 - 285
Target Start/End: Original strand, 4505760 - 4505866
Alignment:
Q  177 tttttggctgaatttttcatttttctaattacacctttaaacaaatttgcatataagaatgttatattgatggtgttattaaaaaatataagaatttata 276  Q
    |||| |||||| ||||||||||  | | ||| ||| ||||||| |||||  ||||| |||  ||| ||| |||||| ||| ||||| |||||||||||||    
T  4505760 ttttaggctgactttttcattt--ccagttatacccttaaacatatttgactataataatcctattttgttggtgtcattcaaaaagataagaatttata 4505857  T
Q  277 ttatatttt 285  Q
    |||||||||    
T  4505858 ttatatttt 4505866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 203 - 284
Target Start/End: Complemental strand, 46250974 - 46250893
Alignment:
Q  203 aattacacctttaaacaaatttgcatataagaatgttatattgatggtgttattaaaaaatataagaatttatattatattt 284  Q
    ||||| ||| |||||||||||||   ||||||||||||| ||| || ||| ||| ||| | | |||||||||||||||||||    
T  46250974 aattatacccttaaacaaatttgatcataagaatgttattttgttgatgtaattcaaagagaaaagaatttatattatattt 46250893  T

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Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 247 - 284
Target Start/End: Original strand, 47683473 - 47683510
Alignment:
Q  247 tggtgttattaaaaaatataagaatttatattatattt 284  Q
    |||||| ||| |||||||||||||||||||||||||||    
T  47683473 tggtgtcattcaaaaatataagaatttatattatattt 47683510  T

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Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 228 - 268
Target Start/End: Original strand, 14065296 - 14065336
Alignment:
Q  228 tataagaatgttatattgatggtgttattaaaaaatataag 268  Q
    ||||| |||||||||||| |||||||||||||||| |||||    
T  14065296 tataataatgttatattggtggtgttattaaaaaagataag 14065336  T

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Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 248 - 284
Target Start/End: Complemental strand, 26509660 - 26509624
Alignment:
Q  248 ggtgttattaaaaaatataagaatttatattatattt 284  Q
    ||||||||||| ||||||||||| |||||||||||||    
T  26509660 ggtgttattaagaaatataagaacttatattatattt 26509624  T

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Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 256 - 284
Target Start/End: Complemental strand, 31444993 - 31444965
Alignment:
Q  256 taaaaaatataagaatttatattatattt 284  Q
    |||||||||||||||||||||||||||||    
T  31444993 taaaaaatataagaatttatattatattt 31444965  T

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Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 209 - 261
Target Start/End: Complemental strand, 33144238 - 33144186
Alignment:
Q  209 acctttaaacaaatttgcatataagaatgttatattgatggtgttattaaaaa 261  Q
    ||||||||| |||||||| | ||| |||||||||||| || ||||||||||||    
T  33144238 acctttaaataaatttgcttttaaaaatgttatattgttgatgttattaaaaa 33144186  T

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Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 213 - 257
Target Start/End: Complemental strand, 44277400 - 44277356
Alignment:
Q  213 ttaaacaaatttgcatataagaatgttatattgatggtgttatta 257  Q
    |||||||||||| ||||||| ||| |||||||| |||||||||||    
T  44277400 ttaaacaaattttcatataataatattatattgttggtgttatta 44277356  T

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Target: scaffold1017 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold1017
Description:

Target: scaffold1017; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 203 - 284
Target Start/End: Complemental strand, 2128 - 2047
Alignment:
Q  203 aattacacctttaaacaaatttgcatataagaatgttatattgatggtgttattaaaaaatataagaatttatattatattt 284  Q
    ||||| ||| ||||||| ||||   ||||| |||||||||||| | |||||||||||||| |||||||||| ||||||||||    
T  2128 aattatacccttaaacatatttttctataataatgttatattgtttgtgttattaaaaaagataagaatttttattatattt 2047  T

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Target: scaffold0003 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 199 - 284
Target Start/End: Complemental strand, 226483 - 226399
Alignment:
Q  199 ttctaattacacctttaaacaaatttgcatataagaatgttatattgatggtgttattaaaaaatataagaatttatattatattt 284  Q
    ||||||||| ||  |||||||||||| | ||||  |||||||||||| | |||||||||||||| |||||||||| ||||||||||    
T  226483 ttctaattatacgattaaacaaattttcttatat-aatgttatattgttcgtgttattaaaaaaaataagaatttttattatattt 226399  T

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Target: scaffold0025 (Bit Score: 37; Significance: 0.000000000009; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 228 - 284
Target Start/End: Original strand, 11678 - 11734
Alignment:
Q  228 tataagaatgttatattgatggtgttattaaaaaatataagaatttatattatattt 284  Q
    ||||| |||||||||||| |||||||||||||||| |||||||||| | ||||||||    
T  11678 tataataatgttatattgttggtgttattaaaaaagataagaatttttgttatattt 11734  T

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Target: scaffold1777 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold1777
Description:

Target: scaffold1777; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 238 - 284
Target Start/End: Original strand, 595 - 641
Alignment:
Q  238 ttatattgatggtgttattaaaaaatataagaatttatattatattt 284  Q
    |||||||| |||| ||||| |||||||||||||||||||||||||||    
T  595 ttatattgttggtattattgaaaaatataagaatttatattatattt 641  T

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Target: scaffold0636 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0636
Description:

Target: scaffold0636; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 185 - 279
Target Start/End: Complemental strand, 3429 - 3335
Alignment:
Q  185 tgaatttttcatttttctaattacacctttaaacaaatttgcatataagaatgttatattgatggtgttattaaaaaatataagaatttatatta 279  Q
    ||||||||  ||| ||||||| | ||||||||||||||||  |||||  |||||||||||  ||||  |||| ||||| ||||||||||||||||    
T  3429 tgaattttgtattattctaataatacctttaaacaaatttttatatattaatgttatattattggtcatatttaaaaagataagaatttatatta 3335  T

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Target: scaffold0013 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 218 - 284
Target Start/End: Complemental strand, 101178 - 101112
Alignment:
Q  218 caaatttgcatataagaatgttatattgatggtgttattaaaaaatataagaatttatattatattt 284  Q
    ||||||||||||||  |||||||||||| ||||   ||||||||| ||| |||||||||||||||||    
T  101178 caaatttgcatatattaatgttatattgttggtcacattaaaaaagatatgaatttatattatattt 101112  T

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Target: scaffold0035 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 172 - 284
Target Start/End: Original strand, 81778 - 81891
Alignment:
Q  172 agagatttttggctgaatttttcatttttctaattacacctttaaacaaatttgcatataagaatgttatattgatggtgttattaaaaaat-ataagaa 270  Q
    ||||| ||| |||||||||||| ||  ||  ||||| ||| |||||||||||| | ||||  ||||||| |||  ||||| ||||||||||  |||||||    
T  81778 agagactttgggctgaattttttataatttcaattatacccttaaacaaattttcctatattaatgttacattcttggtggtattaaaaaaagataagaa 81877  T
Q  271 tttatattatattt 284  Q
    ||||||||||||||    
T  81878 tttatattatattt 81891  T

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Target: scaffold0018 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 239 - 284
Target Start/End: Original strand, 36811 - 36856
Alignment:
Q  239 tatattgatggtgttattaaaaaatataagaatttatattatattt 284  Q
    ||||||| |||||||||||||||| |||||||||| ||||||||||    
T  36811 tatattgttggtgttattaaaaaagataagaatttttattatattt 36856  T

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Target: scaffold1793 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold1793
Description:

Target: scaffold1793; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 247 - 282
Target Start/End: Complemental strand, 608 - 573
Alignment:
Q  247 tggtgttattaaaaaatataagaatttatattatat 282  Q
    |||||| |||||||||||||||||||||||||||||    
T  608 tggtgtcattaaaaaatataagaatttatattatat 573  T

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Target: scaffold0002 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 8 - 66
Target Start/End: Complemental strand, 452537 - 452478
Alignment:
Q  8 tatttaaccactttatagttaca-acttgctaaaatactcctttgaaaaaatgagtgggt 66  Q
    |||||||||||||| |||||| | |||||||||||||||||||  ||||||| |||||||    
T  452537 tatttaaccactttttagttatatacttgctaaaatactccttctaaaaaataagtgggt 452478  T

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Target: scaffold0009 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 189 - 284
Target Start/End: Original strand, 53670 - 53762
Alignment:
Q  189 tttttcatttttctaattacacctttaaacaaatttgcatataagaatgttatattgatggtgttattaaaaaatataagaatttatattatattt 284  Q
    ||||||||| ||  ||||| | ||||||||||||||   ||||| |||||||||||| ||   | ||||||||| |||| ||||||||||||||||    
T  53670 tttttcattatttcaattatatctttaaacaaatttttctataataatgttatattgttg---tcattaaaaaagataaaaatttatattatattt 53762  T

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