View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15395_high_37 (Length: 242)
Name: NF15395_high_37
Description: NF15395
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15395_high_37 |
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Alignment Details
Target: chr3 (Bit Score: 212; Significance: 1e-116; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 212; E-Value: 1e-116
Query Start/End: Original strand, 1 - 224
Target Start/End: Complemental strand, 32340834 - 32340611
Alignment:
| Q |
1 |
ttacaatgctggaaatataaggtttgagataactgaagaagttgtgaaagatggaatggaattttcttctagtataagaagaatgatagattattttgat |
100 |
Q |
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| T |
32340834 |
ttacaatgctggaaatataaggtttgagataactgaagaagttgtgaaagatggaatagaattttcttctagtataagaagaatgatagattattttgat |
32340735 |
T |
|
| Q |
101 |
ttagttatggttgggaggggacatcctcaatctgttttgttacatggacatgatcaatggagtgagtgtcctgagttaggtgtgtttggtgatatgttgg |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |
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| T |
32340734 |
ttagttatggttgggaggggacatcctcaatctgttttgttacatggacatgatcaatggagtgagtgtcctgagttaggtgtggttggtgatatgttgg |
32340635 |
T |
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| Q |
201 |
cttcaacagattttgggacaaagg |
224 |
Q |
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||||||||||||||| |||||||| |
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| T |
32340634 |
cttcaacagattttgtgacaaagg |
32340611 |
T |
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