View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF15395_low_21 (Length: 373)

Name: NF15395_low_21
Description: NF15395
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF15395_low_21
NF15395_low_21
[»] scaffold1301 (1 HSPs)
scaffold1301 (16-355)||(1658-1997)
[»] chr7 (25 HSPs)
chr7 (18-166)||(14816638-14816786)
chr7 (18-166)||(15263634-15263782)
chr7 (18-166)||(46254870-46255021)
chr7 (26-166)||(35794491-35794631)
chr7 (18-162)||(43458191-43458334)
chr7 (18-166)||(25529091-25529239)
chr7 (18-166)||(34847857-34848008)
chr7 (26-166)||(33950943-33951086)
chr7 (18-166)||(36312064-36312214)
chr7 (195-298)||(35794692-35794795)
chr7 (232-298)||(33951198-33951264)
chr7 (232-299)||(25528915-25528982)
chr7 (230-298)||(34847631-34847699)
chr7 (208-298)||(46255106-46255196)
chr7 (232-297)||(14816464-14816529)
chr7 (232-297)||(15263460-15263525)
chr7 (225-298)||(43458440-43458513)
chr7 (119-164)||(44866155-44866200)
chr7 (19-134)||(1377355-1377470)
chr7 (18-97)||(42321186-42321265)
chr7 (225-291)||(44866307-44866373)
chr7 (18-79)||(44863021-44863082)
chr7 (18-102)||(31326669-31326753)
chr7 (208-298)||(36311889-36311979)
chr7 (18-78)||(1852154-1852214)
[»] chr5 (38 HSPs)
chr5 (18-166)||(27114309-27114457)
chr5 (16-166)||(8197411-8197564)
chr5 (18-166)||(8734699-8734846)
chr5 (18-166)||(37012829-37012977)
chr5 (20-151)||(37883431-37883562)
chr5 (18-166)||(12785159-12785310)
chr5 (18-166)||(18808986-18809137)
chr5 (18-151)||(37030261-37030394)
chr5 (18-164)||(3556626-3556772)
chr5 (18-166)||(12723676-12723827)
chr5 (18-166)||(38679434-38679585)
chr5 (20-151)||(26279041-26279172)
chr5 (26-162)||(13822058-13822197)
chr5 (18-160)||(16513581-16513725)
chr5 (18-151)||(25977135-25977264)
chr5 (18-151)||(9715312-9715445)
chr5 (208-298)||(25976922-25977014)
chr5 (28-151)||(11719938-11720061)
chr5 (208-295)||(37883683-37883770)
chr5 (232-298)||(13821879-13821945)
chr5 (233-298)||(27114567-27114632)
chr5 (233-298)||(37013090-37013155)
chr5 (232-298)||(18809246-18809312)
chr5 (241-298)||(8197651-8197708)
chr5 (60-166)||(8299204-8299313)
chr5 (213-298)||(26279297-26279384)
chr5 (247-298)||(38679271-38679322)
chr5 (233-298)||(3556887-3556952)
chr5 (233-294)||(16513401-16513462)
chr5 (245-295)||(12785434-12785484)
chr5 (241-298)||(8734967-8735024)
chr5 (208-298)||(11719725-11719817)
chr5 (26-75)||(15858831-15858880)
chr5 (247-298)||(8299026-8299077)
chr5 (245-295)||(12723951-12724001)
chr5 (20-63)||(2606076-2606119)
chr5 (208-298)||(9715096-9715189)
chr5 (26-75)||(23252487-23252536)
[»] chr4 (59 HSPs)
chr4 (18-166)||(33281091-33281239)
chr4 (18-166)||(51538650-51538798)
chr4 (18-164)||(52416917-52417066)
chr4 (18-164)||(31093111-31093257)
chr4 (18-164)||(35158724-35158870)
chr4 (18-166)||(16023878-16024026)
chr4 (26-166)||(28780760-28780900)
chr4 (18-166)||(1602789-1602936)
chr4 (26-166)||(40728039-40728179)
chr4 (26-166)||(45229083-45229223)
chr4 (18-166)||(49374323-49374470)
chr4 (18-151)||(168540-168673)
chr4 (16-164)||(45462254-45462402)
chr4 (20-151)||(38551270-38551401)
chr4 (18-151)||(2013733-2013866)
chr4 (18-151)||(4189874-4190007)
chr4 (18-164)||(30003616-30003764)
chr4 (18-151)||(28310890-28311024)
chr4 (18-151)||(4048138-4048271)
chr4 (16-166)||(43841859-43842012)
chr4 (18-159)||(9036089-9036232)
chr4 (18-151)||(6963459-6963592)
chr4 (18-166)||(38218247-38218398)
chr4 (30-151)||(45924615-45924736)
chr4 (18-159)||(55136670-55136814)
chr4 (18-151)||(15542841-15542973)
chr4 (33-166)||(56463631-56463767)
chr4 (225-298)||(2013522-2013595)
chr4 (18-151)||(16451935-16452068)
chr4 (208-298)||(30003854-30003944)
chr4 (213-298)||(15542639-15542724)
chr4 (18-151)||(35319896-35320029)
chr4 (208-299)||(49374555-49374646)
chr4 (225-299)||(33281341-33281415)
chr4 (233-298)||(6963738-6963803)
chr4 (225-298)||(52416740-52416813)
chr4 (225-298)||(55136925-55136998)
chr4 (208-339)||(4189622-4189753)
chr4 (225-296)||(35158976-35159047)
chr4 (225-295)||(4048407-4048477)
chr4 (208-298)||(9035907-9035997)
chr4 (185-294)||(28310697-28310806)
chr4 (225-298)||(35319686-35319759)
chr4 (225-298)||(45462495-45462568)
chr4 (230-298)||(1603046-1603114)
chr4 (230-298)||(16024128-16024195)
chr4 (242-298)||(52499595-52499651)
chr4 (231-298)||(45229333-45229400)
chr4 (208-298)||(40728267-40728357)
chr4 (235-298)||(31093374-31093437)
chr4 (241-298)||(56463454-56463511)
chr4 (225-339)||(168289-168402)
chr4 (247-298)||(28780582-28780633)
chr4 (240-298)||(38218083-38218141)
chr4 (26-78)||(20516682-20516734)
chr4 (213-290)||(38551065-38551144)
chr4 (18-78)||(39807350-39807410)
chr4 (208-272)||(45924857-45924921)
chr4 (256-298)||(16452238-16452280)
[»] chr8 (39 HSPs)
chr8 (18-164)||(39318582-39318728)
chr8 (18-164)||(8239974-8240120)
chr8 (18-164)||(40105236-40105382)
chr8 (19-164)||(35684002-35684147)
chr8 (18-162)||(11076233-11076377)
chr8 (18-151)||(6347300-6347433)
chr8 (18-151)||(37098338-37098471)
chr8 (18-151)||(43098545-43098678)
chr8 (18-166)||(39260274-39260425)
chr8 (20-151)||(20091867-20091998)
chr8 (18-151)||(23144107-23144241)
chr8 (26-151)||(627387-627512)
chr8 (18-151)||(32337815-32337948)
chr8 (26-151)||(586411-586536)
chr8 (18-151)||(31701047-31701177)
chr8 (230-298)||(43098334-43098402)
chr8 (227-298)||(20092138-20092209)
chr8 (225-298)||(11076486-11076559)
chr8 (216-298)||(23143910-23143992)
chr8 (230-298)||(39260099-39260167)
chr8 (18-109)||(32947084-32947175)
chr8 (225-299)||(13546047-13546121)
chr8 (225-299)||(13678352-13678426)
chr8 (208-298)||(32947265-32947355)
chr8 (225-299)||(40105055-40105129)
chr8 (225-298)||(35683822-35683895)
chr8 (225-294)||(39318406-39318475)
chr8 (208-299)||(6347554-6347647)
chr8 (225-298)||(8239795-8239868)
chr8 (119-166)||(42131885-42131932)
chr8 (213-298)||(586198-586285)
chr8 (246-298)||(31700836-31700888)
chr8 (230-298)||(42131707-42131775)
chr8 (208-295)||(32338069-32338157)
chr8 (213-257)||(627638-627682)
chr8 (112-151)||(13546259-13546298)
chr8 (112-151)||(13678175-13678214)
chr8 (247-291)||(37098611-37098655)
chr8 (18-50)||(42131969-42132001)
[»] chr3 (36 HSPs)
chr3 (18-166)||(47646921-47647072)
chr3 (18-166)||(26502173-26502324)
chr3 (18-166)||(149331-149479)
chr3 (18-165)||(47013701-47013848)
chr3 (18-166)||(10509203-10509354)
chr3 (18-151)||(32529804-32529937)
chr3 (18-166)||(36402692-36402843)
chr3 (16-166)||(39586576-39586726)
chr3 (18-151)||(6936472-6936605)
chr3 (18-154)||(227634-227770)
chr3 (18-162)||(40937222-40937366)
chr3 (18-151)||(41193717-41193850)
chr3 (26-151)||(39353310-39353435)
chr3 (20-151)||(49166110-49166240)
chr3 (18-146)||(31765207-31765335)
chr3 (20-109)||(41174816-41174905)
chr3 (181-291)||(32530017-32530128)
chr3 (213-294)||(31764995-31765078)
chr3 (227-298)||(149586-149657)
chr3 (231-298)||(41182164-41182231)
chr3 (242-298)||(41193554-41193610)
chr3 (242-298)||(47013570-47013626)
chr3 (241-298)||(26501996-26502053)
chr3 (230-298)||(47647182-47647250)
chr3 (245-292)||(53814919-53814966)
chr3 (230-296)||(10509027-10509093)
chr3 (208-298)||(39586811-39586900)
chr3 (119-164)||(41182006-41182051)
chr3 (240-292)||(6936743-6936795)
chr3 (18-79)||(33843521-33843582)
chr3 (18-79)||(42899222-42899283)
chr3 (233-298)||(49165900-49165964)
chr3 (18-79)||(51329000-51329061)
chr3 (208-268)||(36402547-36402607)
chr3 (26-84)||(53393958-53394016)
chr3 (19-79)||(25214606-25214666)
[»] chr2 (35 HSPs)
chr2 (26-166)||(44760105-44760245)
chr2 (26-166)||(6404128-6404268)
chr2 (18-166)||(15911780-15911931)
chr2 (18-151)||(13278698-13278831)
chr2 (18-166)||(17308962-17309112)
chr2 (26-166)||(30490662-30490805)
chr2 (18-166)||(38703569-38703719)
chr2 (18-164)||(17137689-17137842)
chr2 (18-166)||(45117075-45117230)
chr2 (18-151)||(7942742-7942875)
chr2 (18-151)||(31994077-31994210)
chr2 (20-151)||(1209930-1210062)
chr2 (225-298)||(17137510-17137583)
chr2 (208-298)||(13278952-13279042)
chr2 (21-147)||(18137596-18137722)
chr2 (230-298)||(17309222-17309290)
chr2 (213-296)||(1115362-1115447)
chr2 (208-298)||(38208572-38208662)
chr2 (213-298)||(45234479-45234564)
chr2 (225-293)||(1209725-1209793)
chr2 (232-296)||(38703393-38703457)
chr2 (225-291)||(6404372-6404438)
chr2 (18-96)||(38207489-38207567)
chr2 (216-298)||(31993864-31993948)
chr2 (244-296)||(30490487-30490539)
chr2 (92-166)||(38208410-38208487)
chr2 (242-298)||(44760319-44760375)
chr2 (28-109)||(1114722-1114803)
chr2 (216-257)||(7942573-7942614)
chr2 (256-298)||(15911998-15912040)
chr2 (18-79)||(21485330-21485391)
chr2 (230-287)||(45117337-45117394)
chr2 (16-79)||(37127964-37128027)
chr2 (119-151)||(1115204-1115236)
chr2 (19-79)||(33945933-33945993)
[»] chr1 (47 HSPs)
chr1 (18-166)||(37952305-37952453)
chr1 (20-162)||(29961404-29961546)
chr1 (16-166)||(44496488-44496638)
chr1 (20-151)||(41086406-41086537)
chr1 (20-151)||(41091174-41091305)
chr1 (18-166)||(14587322-14587476)
chr1 (18-151)||(11952421-11952554)
chr1 (26-163)||(42882578-42882715)
chr1 (18-151)||(50261992-50262125)
chr1 (26-151)||(41900288-41900413)
chr1 (18-151)||(49851713-49851846)
chr1 (18-166)||(33801368-33801519)
chr1 (18-151)||(38860681-38860814)
chr1 (18-149)||(52632362-52632493)
chr1 (16-151)||(12528448-12528583)
chr1 (18-151)||(23984039-23984169)
chr1 (26-166)||(12700521-12700664)
chr1 (18-166)||(3517560-3517708)
chr1 (18-159)||(41723533-41723676)
chr1 (208-298)||(12528704-12528794)
chr1 (18-146)||(27216803-27216931)
chr1 (231-298)||(3517397-3517464)
chr1 (225-298)||(42882397-42882470)
chr1 (18-101)||(44757581-44757664)
chr1 (208-298)||(49851967-49852058)
chr1 (247-339)||(52632110-52632202)
chr1 (230-298)||(44496748-44496816)
chr1 (208-298)||(11952210-11952300)
chr1 (225-299)||(29961653-29961727)
chr1 (232-298)||(50261781-50261847)
chr1 (115-166)||(22858800-22858851)
chr1 (208-299)||(41086658-41086749)
chr1 (208-299)||(41091426-41091517)
chr1 (204-298)||(22858920-22859014)
chr1 (232-298)||(23983828-23983894)
chr1 (225-291)||(41900090-41900156)
chr1 (230-287)||(41723793-41723850)
chr1 (241-298)||(48964770-48964827)
chr1 (93-166)||(48964913-48964986)
chr1 (213-298)||(27217061-27217148)
chr1 (230-294)||(14587148-14587212)
chr1 (208-298)||(38860935-38861022)
chr1 (204-298)||(12700360-12700454)
chr1 (245-295)||(37952578-37952628)
chr1 (241-298)||(33801605-33801661)
chr1 (263-298)||(44755217-44755252)
chr1 (26-67)||(48964984-48965025)
[»] chr6 (16 HSPs)
chr6 (18-166)||(9304938-9305086)
chr6 (18-166)||(31271354-31271502)
chr6 (18-150)||(31318539-31318671)
chr6 (21-164)||(31722855-31723001)
chr6 (18-166)||(439036-439187)
chr6 (18-166)||(16395320-16395471)
chr6 (208-299)||(9304762-9304853)
chr6 (18-160)||(303759-303904)
chr6 (232-298)||(31271614-31271680)
chr6 (232-298)||(31722689-31722755)
chr6 (213-298)||(16395564-16395649)
chr6 (231-297)||(304020-304085)
chr6 (230-299)||(11975247-11975316)
chr6 (231-294)||(439298-439361)
chr6 (18-134)||(20818537-20818653)
chr6 (241-298)||(31318792-31318849)
[»] scaffold0121 (1 HSPs)
scaffold0121 (208-298)||(47239-47331)
[»] scaffold0054 (1 HSPs)
scaffold0054 (21-102)||(19071-19152)


Alignment Details
Target: scaffold1301 (Bit Score: 305; Significance: 1e-171; HSPs: 1)
Name: scaffold1301
Description:

Target: scaffold1301; HSP #1
Raw Score: 305; E-Value: 1e-171
Query Start/End: Original strand, 16 - 355
Target Start/End: Original strand, 1658 - 1997
Alignment:
Q  16 ataggtgaactgaagaatgaaggtatttgttgaagttggaagcttatttatagtctaaaacaagccttaagtcattaatacagtcaacgaaaacaagtta 115  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1658 ataggtgaactgaagaatgaaggtatttgttgaagttggaagcctatttatagtctaaaacaagccttaagtcattaatacagtcaacgaaaacaagtta 1757  T
Q  116 gtggttgtaaccgtccaaacccacattaatggctctgaatctttccggattccggaacataaccattccctcgttcacaattatcactttaatccgtaaa 215  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1758 gtggttgtaaccgtccaaacccacattaatggctctgaatctttccggattccggaacataaccattccctcgttcacaattatcactttaatccgtaaa 1857  T
Q  216 acaaaggtacatttcggattttattttccggaatgcatcagtcatgaccggtggtctgcaccacacgtttttgtcggtggtcagatnnnnnnnnntgcgt 315  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||         |||||    
T  1858 acaaaggtacatttcggattttattttccggaatgcatcagtcatgaccggtggtctgcaccacacgtttttgtcagtggtcagataaaaaaaaatgcgt 1957  T
Q  316 tttaccacgttttttgactgcattacggcattcaagttat 355  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  1958 tttaccacgttttttgactgcattacggcattcaagttat 1997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 101; Significance: 6e-50; HSPs: 25)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 18 - 166
Target Start/End: Complemental strand, 14816786 - 14816638
Alignment:
Q  18 aggtgaactgaagaatgaaggtatttgttgaagttggaagcttatttatagtctaaaacaagccttaagtcattaatacagtcaacgaaaacaagttagt 117  Q
    ||||||| ||||||||||||||||||||||||| ||||||| ||||||||| |||||||||| | || ||||||||||||||||| ||||||  ||||||    
T  14816786 aggtgaagtgaagaatgaaggtatttgttgaagatggaagcctatttataggctaaaacaagtcctaggtcattaatacagtcaatgaaaacgtgttagt 14816687  T
Q  118 ggttgtaaccgtccaaacccacattaatggctctgaatctttccggatt 166  Q
    ||||||||||||||||||||||||||||||||||| ||||||| |||||    
T  14816686 ggttgtaaccgtccaaacccacattaatggctctggatctttctggatt 14816638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 18 - 166
Target Start/End: Complemental strand, 15263782 - 15263634
Alignment:
Q  18 aggtgaactgaagaatgaaggtatttgttgaagttggaagcttatttatagtctaaaacaagccttaagtcattaatacagtcaacgaaaacaagttagt 117  Q
    ||||||| ||||||||||||||||||||||||| ||||||| ||||||||| |||||||||| | || ||||||||||||||||| ||||||  ||||||    
T  15263782 aggtgaagtgaagaatgaaggtatttgttgaagatggaagcctatttataggctaaaacaagtcctaggtcattaatacagtcaatgaaaacgtgttagt 15263683  T
Q  118 ggttgtaaccgtccaaacccacattaatggctctgaatctttccggatt 166  Q
    ||||||||||||||||||||||||||||||||||| ||||||| |||||    
T  15263682 ggttgtaaccgtccaaacccacattaatggctctggatctttctggatt 15263634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 18 - 166
Target Start/End: Original strand, 46254870 - 46255021
Alignment:
Q  18 aggtgaactgaagaatgaaggtatttgttgaagttggaagcttatttatagtctaaaacaagccttaagtcattaatacagtcaacgaaaacaagttagt 117  Q
    ||||||| ||||||||||||||||||||||||| ||||||| ||||||||| |||||||||| | || ||||||||||||||||| ||||||  ||||||    
T  46254870 aggtgaagtgaagaatgaaggtatttgttgaagatggaagcctatttatagcctaaaacaagtcctaggtcattaatacagtcaatgaaaacgtgttagt 46254969  T
Q  118 g---gttgtaaccgtccaaacccacattaatggctctgaatctttccggatt 166  Q
    |   |||||||||||||||||||||||||||||||||||||||||| |||||    
T  46254970 ggttgttgtaaccgtccaaacccacattaatggctctgaatctttctggatt 46255021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 26 - 166
Target Start/End: Original strand, 35794491 - 35794631
Alignment:
Q  26 tgaagaatgaaggtatttgttgaagttggaagcttatttatagtctaaaacaagccttaagtcattaatacagtcaacgaaaacaagttagtggttgtaa 125  Q
    ||||||||||||||||||||||||| ||||||| ||||||||| |||||||||| | || ||||||||||||||||| ||||||  ||||||||||||||    
T  35794491 tgaagaatgaaggtatttgttgaagatggaagcctatttatagcctaaaacaagtcataggtcattaatacagtcaatgaaaacgtgttagtggttgtaa 35794590  T
Q  126 ccgtccaaacccacattaatggctctgaatctttccggatt 166  Q
    ||||||||| ||| |||||||||||| ||||||||||||||    
T  35794591 ccgtccaaatccatattaatggctctaaatctttccggatt 35794631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 18 - 162
Target Start/End: Original strand, 43458191 - 43458334
Alignment:
Q  18 aggtgaactgaagaatgaaggtatttgttgaagttggaagcttatttatagtctaaaacaagccttaagtcattaatacagtcaacgaaaacaagttagt 117  Q
    ||||||| ||||||||||||||||||||||||| || | || ||||||||| |||||||||| | || ||||||||||||||||| ||||||  ||||||    
T  43458191 aggtgaagtgaagaatgaaggtatttgttgaagatgta-gcctatttatagcctaaaacaagtcctatgtcattaatacagtcaatgaaaacgtgttagt 43458289  T
Q  118 ggttgtaaccgtccaaacccacattaatggctctgaatctttccg 162  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  43458290 ggttgtaaccgtccaaacccacattaatggctctgaatctttccg 43458334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 18 - 166
Target Start/End: Complemental strand, 25529239 - 25529091
Alignment:
Q  18 aggtgaactgaagaatgaaggtatttgttgaagttggaagcttatttatagtctaaaacaagccttaagtcattaatacagtcaacgaaaacaagttagt 117  Q
    ||||||| ||||||||||||||||||||||||| ||||||| ||||||||| |||||||||| | || |||||||||||| |||| ||| ||  || |||    
T  25529239 aggtgaagtgaagaatgaaggtatttgttgaagatggaagcctatttatagcctaaaacaagtcctaggtcattaatacaatcaatgaatacgtgtcagt 25529140  T
Q  118 ggttgtaaccgtccaaacccacattaatggctctgaatctttccggatt 166  Q
    ||||||||||||||||||||||||||||| ||||||||||||| |||||    
T  25529139 ggttgtaaccgtccaaacccacattaatgactctgaatctttctggatt 25529091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 18 - 166
Target Start/End: Complemental strand, 34848008 - 34847857
Alignment:
Q  18 aggtgaactgaagaatgaaggtatttgttgaagttggaagcttatttatagtctaaaacaagccttaagtcattaatacagtcaacgaaaacaagttagt 117  Q
    ||||||| |||||||||||||||| |||||||| ||||||| |||||||||  ||||||||| | || ||||||||||||||||| ||||||  ||||||    
T  34848008 aggtgaagtgaagaatgaaggtatctgttgaagatggaagcctatttatagcataaaacaagtcctaggtcattaatacagtcaatgaaaacgtgttagt 34847909  T
Q  118 gg---ttgtaaccgtccaaacccacattaatggctctgaatctttccggatt 166  Q
    ||   ||||||| |||||||||||||||||||||||||||||||||||||||    
T  34847908 ggttgttgtaactgtccaaacccacattaatggctctgaatctttccggatt 34847857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 26 - 166
Target Start/End: Original strand, 33950943 - 33951086
Alignment:
Q  26 tgaagaatgaaggtatttgttgaagttggaagcttatttatagtctaaaacaagccttaagtcattaatacagtcaacgaaaacaagttagtg---gttg 122  Q
    |||||||| |||||||||||||||| | ||| ||||||||||| |||||||||| | || ||||||||||||||||| ||||||  |||||||   ||||    
T  33950943 tgaagaataaaggtatttgttgaagatagaaacttatttatagcctaaaacaagtcctaggtcattaatacagtcaatgaaaacgtgttagtggttgttg 33951042  T
Q  123 taaccgtccaaacccacattaatggctctgaatctttccggatt 166  Q
    ||||| |||||||||||||||||||||||||||| |||||||||    
T  33951043 taaccatccaaacccacattaatggctctgaatcgttccggatt 33951086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 18 - 166
Target Start/End: Complemental strand, 36312214 - 36312064
Alignment:
Q  18 aggtgaactgaagaatgaaggtatttgttgaagttggaagcttatttatagtctaaaacaagccttaagtcattaatacagtcaacgaaaacaagttagt 117  Q
    ||||||| |||| ||||||| |||||||||||| ||||||  |||| |||| ||||||||||   || |||||||||||||||||  |||||  ||||||    
T  36312214 aggtgaagtgaacaatgaagatatttgttgaagatggaagtctatt-atagcctaaaacaagttctaggtcattaatacagtcaataaaaacgtgttagt 36312116  T
Q  118 ggttgt---aaccgtccaaacccacattaatggctctgaatctttccggatt 166  Q
    ||||||   |||||||||||||||||||||||||||||||||||||||||||    
T  36312115 ggttgttgtaaccgtccaaacccacattaatggctctgaatctttccggatt 36312064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 195 - 298
Target Start/End: Original strand, 35794692 - 35794795
Alignment:
Q  195 attatcactttaatccgtaaaacaaaggtacatttcggattttattttccggaatgcatcagtcatgaccggtggtctgcaccacacgtttttgtcggtg 294  Q
    |||||| | |||||||| |||||| | || |||| |||||||||| ||||||||||||||||||||| || |||||||||||||||||||||||||||||    
T  35794692 attatcgcattaatccggaaaacatatgtgcattccggattttatattccggaatgcatcagtcatggccagtggtctgcaccacacgtttttgtcggtg 35794791  T
Q  295 gtca 298  Q
    ||||    
T  35794792 gtca 35794795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 232 - 298
Target Start/End: Original strand, 33951198 - 33951264
Alignment:
Q  232 gattttattttccggaatgcatcagtcatgaccggtggtctgcaccacacgtttttgtcggtggtca 298  Q
    |||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33951198 gattatatattccggaatgcatcagtcatgaccggtggtctgcaccacacgtttttgtcggtggtca 33951264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 232 - 299
Target Start/End: Complemental strand, 25528982 - 25528915
Alignment:
Q  232 gattttattttccggaatgcatcagtcatgaccggtggtctgcaccacacgtttttgtcggtggtcag 299  Q
    |||||||| ||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||    
T  25528982 gattttatattccggaatgcatcagtcatggccggtggtctgcaccacatgtttttgtcggtggtcag 25528915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 230 - 298
Target Start/End: Complemental strand, 34847699 - 34847631
Alignment:
Q  230 cggattttattttccggaatgcatcagtcatgaccggtggtctgcaccacacgtttttgtcggtggtca 298  Q
    |||||| ||| ||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  34847699 cggattatatattctggaatgcatcagtcatggccggtggtctgcaccacacgtttttgtcggtggtca 34847631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 208 - 298
Target Start/End: Original strand, 46255106 - 46255196
Alignment:
Q  208 tccgtaaaacaaaggtacatttcggattttattttccggaatgcatcagtcatgaccggtggtctgcaccacacgtttttgtcggtggtca 298  Q
    |||| |||||| | || |||| || ||||||| |||||||||||||||||||||  |||||||||||||||||| ||||||||||||||||    
T  46255106 tccggaaaacagatgtgcattccgaattttatattccggaatgcatcagtcatggtcggtggtctgcaccacacatttttgtcggtggtca 46255196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 232 - 297
Target Start/End: Complemental strand, 14816529 - 14816464
Alignment:
Q  232 gattttattttccggaatgcatcagtcatgaccggtggtctgcaccacacgtttttgtcggtggtc 297  Q
    |||||||| ||||| |||| |||||||||||||||||||||||| |||||||||||||||||||||    
T  14816529 gattttatattccgaaatgtatcagtcatgaccggtggtctgcaacacacgtttttgtcggtggtc 14816464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 232 - 297
Target Start/End: Complemental strand, 15263525 - 15263460
Alignment:
Q  232 gattttattttccggaatgcatcagtcatgaccggtggtctgcaccacacgtttttgtcggtggtc 297  Q
    |||||||| ||||| |||| |||||||||||||||||||||||| |||||||||||||||||||||    
T  15263525 gattttatattccgaaatgtatcagtcatgaccggtggtctgcaacacacgtttttgtcggtggtc 15263460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 225 - 298
Target Start/End: Original strand, 43458440 - 43458513
Alignment:
Q  225 catttcggattttattttccggaatgcatcagtcatgaccggtggtctgcaccacacgtttttgtcggtggtca 298  Q
    |||| |||||||||| ||||  |||||||||||||||  ||||||||||||||| |||||||||||||| ||||    
T  43458440 cattccggattttatattccataatgcatcagtcatggtcggtggtctgcaccatacgtttttgtcggtagtca 43458513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 119 - 164
Target Start/End: Original strand, 44866155 - 44866200
Alignment:
Q  119 gttgtaaccgtccaaacccacattaatggctctgaatctttccgga 164  Q
    |||||||||||||||||||||| |||||||||||||||||||||||    
T  44866155 gttgtaaccgtccaaacccacaataatggctctgaatctttccgga 44866200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 19 - 134
Target Start/End: Original strand, 1377355 - 1377470
Alignment:
Q  19 ggtgaactgaagaatgaaggtatttgttgaagttggaagcttatttatagtctaaaacaagccttaagtcattaatacagtcaacgaaaacaagttagtg 118  Q
    |||||| ||||||||||||  ||||||||||| ||||||| ||||||||| |||||| ||| | || ||||| | ||||||||| ||||||  ||| |||    
T  1377355 ggtgaagtgaagaatgaagaaatttgttgaagatggaagcctatttatagcctaaaataagtcatatgtcataagtacagtcaatgaaaacgtgtttgtg 1377454  T
Q  119 gttgtaaccgtccaaa 134  Q
    ||  ||||| ||||||    
T  1377455 gtgctaaccatccaaa 1377470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 18 - 97
Target Start/End: Complemental strand, 42321265 - 42321186
Alignment:
Q  18 aggtgaactgaagaatgaaggtatttgttgaagttggaagcttatttatagtctaaaacaagccttaagtcattaataca 97  Q
    ||||||| |||||||||||| |||||||||||| ||||||| ||||||||  |||||||||| | || || |||||||||    
T  42321265 aggtgaagtgaagaatgaagatatttgttgaagatggaagcctatttataacctaaaacaagtcataggttattaataca 42321186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 225 - 291
Target Start/End: Original strand, 44866307 - 44866373
Alignment:
Q  225 catttcggattttattttccggaatgcatcagtcatgaccggtggtctgcaccacacgtttttgtcg 291  Q
    |||| |||||||||  |||| ||||||||||||||||  |||||||||||| |||||||||||||||    
T  44866307 cattccggattttaaattccagaatgcatcagtcatggtcggtggtctgcatcacacgtttttgtcg 44866373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 18 - 79
Target Start/End: Original strand, 44863021 - 44863082
Alignment:
Q  18 aggtgaactgaagaatgaaggtatttgttgaagttggaagcttatttatagtctaaaacaag 79  Q
    ||||||| ||||||||||||||||||||| ||| | ||||| |||||||||  |||||||||    
T  44863021 aggtgaagtgaagaatgaaggtatttgttcaagattgaagcatatttatagcttaaaacaag 44863082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 18 - 102
Target Start/End: Complemental strand, 31326753 - 31326669
Alignment:
Q  18 aggtgaactgaagaatgaaggtatttgttgaagttggaagcttatttatagtctaaaacaagccttaagtcattaatacagtcaa 102  Q
    ||||||| ||||||||||||  ||||||||||| || || | |||||||||| ||||||||| | ||| |||| | |||||||||    
T  31326753 aggtgaagtgaagaatgaagaaatttgttgaagatgcaaacctatttatagtataaaacaagtcctaaatcataattacagtcaa 31326669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 208 - 298
Target Start/End: Complemental strand, 36311979 - 36311889
Alignment:
Q  208 tccgtaaaacaaaggtacatttcggattttattttccggaatgcatcagtcatgaccggtggtctgcaccacacgtttttgtcggtggtca 298  Q
    |||| |||||| | || |||| |||||||||| ||||| ||||||||||||||  ||| |||||| |||| ||| |||||||  |||||||    
T  36311979 tccggaaaacagatgtgcattccggattttatattccgaaatgcatcagtcatagccgctggtctacaccgcacatttttgtaagtggtca 36311889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 18 - 78
Target Start/End: Original strand, 1852154 - 1852214
Alignment:
Q  18 aggtgaactgaagaatgaaggtatttgttgaagttggaagcttatttatagtctaaaacaa 78  Q
    ||||||| |||||||||||||  |||||| ||| || |||||||| ||||| |||||||||    
T  1852154 aggtgaagtgaagaatgaaggactttgttcaagatgcaagcttatatatagcctaaaacaa 1852214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 101; Significance: 6e-50; HSPs: 38)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 18 - 166
Target Start/End: Original strand, 27114309 - 27114457
Alignment:
Q  18 aggtgaactgaagaatgaaggtatttgttgaagttggaagcttatttatagtctaaaacaagccttaagtcattaatacagtcaacgaaaacaagttagt 117  Q
    ||||||| |||||||||||| |||||||||||| ||||||| ||||||||| |||||||||| | || ||||||||||||||||| ||||||  ||| ||    
T  27114309 aggtgaagtgaagaatgaagatatttgttgaagatggaagcctatttatagcctaaaacaagtcctatgtcattaatacagtcaatgaaaacgtgttggt 27114408  T
Q  118 ggttgtaaccgtccaaacccacattaatggctctgaatctttccggatt 166  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||    
T  27114409 ggttgtaaccgtccaaacccacattaatggctctgaatctttccggatt 27114457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 16 - 166
Target Start/End: Original strand, 8197411 - 8197564
Alignment:
Q  16 ataggtgaactgaagaatgaaggtatttgttgaagttggaagcttatttatagtctaaaacaagccttaagtcattaatacagtcaacgaaaacaagtta 115  Q
    |||||| || ||||||||||||||||||||||||| ||||||| |||||||||||||||||||| | || ||||||||||||||||| ||||||  ||||    
T  8197411 ataggtaaagtgaagaatgaaggtatttgttgaagatggaagcctatttatagtctaaaacaagtcctaggtcattaatacagtcaatgaaaacgtgtta 8197510  T
Q  116 gtg---gttgtaaccgtccaaacccacattaatggctctgaatctttccggatt 166  Q
    |||   ||||||||||||||||||||||||||||||||| ||||||||||||||    
T  8197511 gtggttgttgtaaccgtccaaacccacattaatggctctaaatctttccggatt 8197564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 18 - 166
Target Start/End: Original strand, 8734699 - 8734846
Alignment:
Q  18 aggtgaactgaagaatgaaggtatttgttgaagttggaagcttatttatagtctaaaacaagccttaagtcattaatacagtcaacgaaaacaagttagt 117  Q
    ||||||| ||||||||||||||||||||| | | ||||||| ||||||||| |||||||||| | || ||||||||||||||||| ||||||  ||||||    
T  8734699 aggtgaagtgaagaatgaaggtatttgttca-gatggaagcctatttatagcctaaaacaagtcctaggtcattaatacagtcaatgaaaacgtgttagt 8734797  T
Q  118 ggttgtaaccgtccaaacccacattaatggctctgaatctttccggatt 166  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||    
T  8734798 ggttgtaatcgtccaaacccacattaatggctctgaatctttccggatt 8734846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 18 - 166
Target Start/End: Original strand, 37012829 - 37012977
Alignment:
Q  18 aggtgaactgaagaatgaaggtatttgttgaagttggaagcttatttatagtctaaaacaagccttaagtcattaatacagtcaacgaaaacaagttagt 117  Q
    ||||||| ||||||||||| ||||||||||||| ||||||| ||||||||| ||||||||||   || |||||| |||||||||| ||||||  ||||||    
T  37012829 aggtgaagtgaagaatgaaagtatttgttgaagatggaagcctatttatagcctaaaacaagttctaggtcattcatacagtcaatgaaaacgtgttagt 37012928  T
Q  118 ggttgtaaccgtccaaacccacattaatggctctgaatctttccggatt 166  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||    
T  37012929 ggttgtaaccgtccaaacccacattaatggctctgaatcttttcggatt 37012977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 20 - 151
Target Start/End: Original strand, 37883431 - 37883562
Alignment:
Q  20 gtgaactgaagaatgaaggtatttgttgaagttggaagcttatttatagtctaaaacaagccttaagtcattaatacagtcaacgaaaacaagttagtgg 119  Q
    ||||| ||||||||||||||||||||||||| ||||||| |||||||||  ||||||||| |||| ||||||| || |||||| ||||||| ||||||||    
T  37883431 gtgaagtgaagaatgaaggtatttgttgaagatggaagcctatttatagcttaaaacaagtcttaggtcattactatagtcaatgaaaacatgttagtgg 37883530  T
Q  120 ttgtaaccgtccaaacccacattaatggctct 151  Q
    ||||||||||||||||||||||||||||||||    
T  37883531 ttgtaaccgtccaaacccacattaatggctct 37883562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 18 - 166
Target Start/End: Original strand, 12785159 - 12785310
Alignment:
Q  18 aggtgaactgaagaatgaaggtatttgttgaagttggaagcttatttatagtctaaaacaagccttaagtcattaatacagtcaacgaaaacaagttagt 117  Q
    ||||||| ||||||||||||||||||||||||| | ||||| ||||||||| |||||||||| | || ||||||||||||||||| ||||||  ||||||    
T  12785159 aggtgaagtgaagaatgaaggtatttgttgaagattgaagcctatttatagcctaaaacaagtcctaggtcattaatacagtcaatgaaaacgtgttagt 12785258  T
Q  118 g---gttgtaaccgtccaaacccacattaatggctctgaatctttccggatt 166  Q
    |   |||||||||||||||||||||||||| |||| ||||||||||||||||    
T  12785259 ggttgttgtaaccgtccaaacccacattaacggctatgaatctttccggatt 12785310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 18 - 166
Target Start/End: Original strand, 18808986 - 18809137
Alignment:
Q  18 aggtgaactgaagaatgaaggtatttgttgaagttggaagcttatttatagtctaaaacaagccttaagtcattaatacagtcaacgaaaacaagttagt 117  Q
    ||||||| ||||||||||||||||||||||||| ||||||  ||||||||| |||||||||| | || ||||||||||||||||| ||||||  ||||||    
T  18808986 aggtgaagtgaagaatgaaggtatttgttgaagatggaagactatttatagcctaaaacaagtcataggtcattaatacagtcaatgaaaacgtgttagt 18809085  T
Q  118 g---gttgtaaccgtccaaacccacattaatggctctgaatctttccggatt 166  Q
    |   |||||||||||||||||| |||||||||||||||||||||| ||||||    
T  18809086 ggttgttgtaaccgtccaaacctacattaatggctctgaatcttttcggatt 18809137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 18 - 151
Target Start/End: Complemental strand, 37030394 - 37030261
Alignment:
Q  18 aggtgaactgaagaatgaaggtatttgttgaagttggaagcttatttatagtctaaaacaagccttaagtcattaatacagtcaacgaaaacaagttagt 117  Q
    ||||||| ||||||||||||||||||||||||| ||||||  ||||||||| |||||||||| | || ||||||||||||||||| ||||||  ||||||    
T  37030394 aggtgaagtgaagaatgaaggtatttgttgaagatggaagtctatttatagcctaaaacaagtcctaggtcattaatacagtcaatgaaaacgtgttagt 37030295  T
Q  118 ggttgtaaccgtccaaacccacattaatggctct 151  Q
    |||||||||| |||||||||||||||||||||||    
T  37030294 ggttgtaaccatccaaacccacattaatggctct 37030261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 18 - 164
Target Start/End: Original strand, 3556626 - 3556772
Alignment:
Q  18 aggtgaactgaagaatgaaggtatttgttgaagttggaagcttatttatagtctaaaacaagccttaagtcattaatacagtcaacgaaaacaagttagt 117  Q
    ||||||| ||||||||||||| ||||||| ||| ||||||| ||||||||| |||||||||| | || ||||||||||||||||| ||||||  ||||||    
T  3556626 aggtgaagtgaagaatgaaggaatttgttaaagatggaagcatatttatagcctaaaacaagtcctaggtcattaatacagtcaatgaaaacgtgttagt 3556725  T
Q  118 ggttgtaaccgtccaaacccacattaatggctctgaatctttccgga 164  Q
    | |||||| |||||||||||||| ||| ||||| |||||||||||||    
T  3556726 gcttgtaatcgtccaaacccacaataacggctccgaatctttccgga 3556772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 18 - 166
Target Start/End: Original strand, 12723676 - 12723827
Alignment:
Q  18 aggtgaactgaagaatgaaggtatttgttgaagttggaagcttatttatagtctaaaacaagccttaagtcattaatacagtcaacgaaaacaagttagt 117  Q
    ||||||| ||||||||||||||||||||||||| || || | ||||||||| |||||||||| | || ||||||||||||||||| ||||||  ||||||    
T  12723676 aggtgaagtgaagaatgaaggtatttgttgaagatgaaaacctatttatagcctaaaacaagtcctaggtcattaatacagtcaatgaaaacgtgttagt 12723775  T
Q  118 g---gttgtaaccgtccaaacccacattaatggctctgaatctttccggatt 166  Q
    |   |||||||||||||||||||||||||| | || ||||||||||||||||    
T  12723776 ggttgttgtaaccgtccaaacccacattaacgactatgaatctttccggatt 12723827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 18 - 166
Target Start/End: Complemental strand, 38679585 - 38679434
Alignment:
Q  18 aggtgaactgaagaatgaaggtatttgttgaagttggaagcttatttatagtctaaaacaagccttaagtcattaatacagtcaacgaaaacaagttagt 117  Q
    ||||||| ||||||||| || |||||||||||| | ||||| ||||||||| |||||||||| | |||||||||||||||||||| | |||   ||||||    
T  38679585 aggtgaagtgaagaatgtagatatttgttgaagattgaagcctatttatagcctaaaacaagtcctaagtcattaatacagtcaatgcaaaagtgttagt 38679486  T
Q  118 gg---ttgtaaccgtccaaacccacattaatggctctgaatctttccggatt 166  Q
    ||   ||||||||||||||| |||||||||||||||||||||||||||||||    
T  38679485 ggttgttgtaaccgtccaaatccacattaatggctctgaatctttccggatt 38679434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 20 - 151
Target Start/End: Original strand, 26279041 - 26279172
Alignment:
Q  20 gtgaactgaagaatgaaggtatttgttgaagttggaagcttatttatagtctaaaacaagccttaagtcattaatacagtcaacgaaaacaagttagtgg 119  Q
    ||||| ||||||||||||||||||||||||| ||||||| ||||||||| |||||||||| | |  ||||||| ||||||||| ||||||  ||||||||    
T  26279041 gtgaagtgaagaatgaaggtatttgttgaagatggaagcctatttatagcctaaaacaagtcctgggtcattagtacagtcaatgaaaacgtgttagtgg 26279140  T
Q  120 ttgtaaccgtccaaacccacattaatggctct 151  Q
    ||||||||||||||||| ||||||||| ||||    
T  26279141 ttgtaaccgtccaaacctacattaatgactct 26279172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 26 - 162
Target Start/End: Complemental strand, 13822197 - 13822058
Alignment:
Q  26 tgaagaatgaaggtatttgttgaagttggaagcttatttatagtctaaaacaagccttaagtcattaatacagtcaacgaaaacaagttagtgg---ttg 122  Q
    ||||||||||||||||||||||||| ||||| | ||||||||| |||||||||| | ||  |||||||||||||||| ||||||  ||||||||   |||    
T  13822197 tgaagaatgaaggtatttgttgaagatggaaacctatttatagcctaaaacaagtcatagatcattaatacagtcaatgaaaacgtgttagtggttgttg 13822098  T
Q  123 taaccgtccaaacccacattaatggctctgaatctttccg 162  Q
    ||||||| |||| |||||||||||||||||||||||||||    
T  13822097 taaccgttcaaatccacattaatggctctgaatctttccg 13822058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 18 - 160
Target Start/End: Complemental strand, 16513725 - 16513581
Alignment:
Q  18 aggtgaactgaagaatgaaggtatttgttgaagttggaagcttatttatagtctaaaacaagccttaagtcattaatacagtcaacgaaaacaagttagt 117  Q
    ||||||| ||||||||||||||||||||||||  | ||||| |||||||||| ||||||||| | || ||||||||||||||| | ||||||  ||||||    
T  16513725 aggtgaagtgaagaatgaaggtatttgttgaaaattgaagcctatttatagtttaaaacaagtcataggtcattaatacagtcgatgaaaacgtgttagt 16513626  T
Q  118 ggttgt--aaccgtccaaacccacattaatggctctgaatctttc 160  Q
    ||||||   | ||| |||| ||||| |||||||||||||||||||    
T  16513625 ggttgttgtaacgtacaaaaccacaataatggctctgaatctttc 16513581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 18 - 151
Target Start/End: Complemental strand, 25977264 - 25977135
Alignment:
Q  18 aggtgaactgaagaatgaaggtatttgttgaagttggaagcttatttatagtctaaaacaagccttaagtcattaatacagtcaacgaaaacaagttagt 117  Q
    ||||||| ||||||||||||||    ||||||| ||||||| ||||||||  |||||||||| | |||||||||| ||||||||| ||||||  ||||||    
T  25977264 aggtgaagtgaagaatgaaggt----gttgaagatggaagcctatttataacctaaaacaagtcctaagtcattactacagtcaatgaaaacgtgttagt 25977169  T
Q  118 ggttgtaaccgtccaaacccacattaatggctct 151  Q
    |||||||| |||||||||| ||||||||| ||||    
T  25977168 ggttgtaatcgtccaaacctacattaatgactct 25977135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 18 - 151
Target Start/End: Complemental strand, 9715445 - 9715312
Alignment:
Q  18 aggtgaactgaagaatgaaggtatttgttgaagttggaagcttatttatagtctaaaacaagccttaagtcattaatacagtcaacgaaaacaagttagt 117  Q
    ||||||| |||||||||||| |||||||||||| ||||||  ||||||||| |||||| ||| | || ||||||| | ||||||| ||||||  ||| ||    
T  9715445 aggtgaagtgaagaatgaagctatttgttgaagatggaagtctatttatagcctaaaaaaagtcataggtcattagtgcagtcaatgaaaacgtgttggt 9715346  T
Q  118 ggttgtaaccgtccaaacccacattaatggctct 151  Q
    ||||||||||||||||||| |||| |||| ||||    
T  9715345 ggttgtaaccgtccaaacctacatcaatgactct 9715312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 208 - 298
Target Start/End: Complemental strand, 25977014 - 25976922
Alignment:
Q  208 tccgtaaaacaaaggtacatttcggattttattttccggaatgcatca--gtcatgaccggtggtctgcaccacacgtttttgtcggtggtca 298  Q
    |||| |||||||||||||||| |||||||||||||||||| |||||||  |||||| |||||||| ||||||||| |||||||||||||||||    
T  25977014 tccggaaaacaaaggtacattccggattttattttccggactgcatcagtgtcatggccggtggtttgcaccacatgtttttgtcggtggtca 25976922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 28 - 151
Target Start/End: Complemental strand, 11720061 - 11719938
Alignment:
Q  28 aagaatgaaggtatttgttgaagttggaagcttatttatagtctaaaacaagccttaagtcattaatacagtcaacgaaaacaagttagtggttgtaacc 127  Q
    ||||||||||||||||||||||| || |||  ||||||| | |||||| ||| | || ||||||| ||||||||| ||||||  ||||||||| ||||||    
T  11720061 aagaatgaaggtatttgttgaagatgaaagtctatttatggcctaaaataagtcctaggtcattagtacagtcaatgaaaacgtgttagtggtcgtaacc 11719962  T
Q  128 gtccaaacccacattaatggctct 151  Q
    || |||||| ||||||||||||||    
T  11719961 gttcaaacctacattaatggctct 11719938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 208 - 295
Target Start/End: Original strand, 37883683 - 37883770
Alignment:
Q  208 tccgtaaaacaaaggtacatttcggattttattttccggaatgcatcagtcatgaccggtggtctgcaccacacgtttttgtcggtgg 295  Q
    |||| |||||| | || |||| |||||||||| ||||||||||||||||||||| ||||||||||||||||||| |||||||||||||    
T  37883683 tccgaaaaacagatgtgcattccggattttatattccggaatgcatcagtcatggccggtggtctgcaccacacatttttgtcggtgg 37883770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 232 - 298
Target Start/End: Complemental strand, 13821945 - 13821879
Alignment:
Q  232 gattttattttccggaatgcatcagtcatgaccggtggtctgcaccacacgtttttgtcggtggtca 298  Q
    |||||||| ||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  13821945 gattttatattctggaatgcatcagtcatggccggtggtctgcaccacacgtttttgtcggtggtca 13821879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 233 - 298
Target Start/End: Original strand, 27114567 - 27114632
Alignment:
Q  233 attttattttccggaatgcatcagtcatgaccggtggtctgcaccacacgtttttgtcggtggtca 298  Q
    ||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||    
T  27114567 attttatattccggaatgcatcagtcatggccggtggtctgcaccacacgtttttgtcgatggtca 27114632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 233 - 298
Target Start/End: Original strand, 37013090 - 37013155
Alignment:
Q  233 attttattttccggaatgcatcagtcatgaccggtggtctgcaccacacgtttttgtcggtggtca 298  Q
    ||||||| ||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||    
T  37013090 attttatattccggaatgcatcagtcatggctggtggtctgcaccacacgtttttgtcggtggtca 37013155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 232 - 298
Target Start/End: Original strand, 18809246 - 18809312
Alignment:
Q  232 gattttattttccggaatgcatcagtcatgaccggtggtctgcaccacacgtttttgtcggtggtca 298  Q
    |||||||| |||||||||||||||||||||  |||||||||||| ||||||||||||||||||||||    
T  18809246 gattttatattccggaatgcatcagtcatggtcggtggtctgcatcacacgtttttgtcggtggtca 18809312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 241 - 298
Target Start/End: Original strand, 8197651 - 8197708
Alignment:
Q  241 ttccggaatgcatcagtcatgaccggtggtctgcaccacacgtttttgtcggtggtca 298  Q
    ||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||    
T  8197651 ttccggaatgcatcagtcatggccgctggtctgcaccacacgtttttgtcggtggtca 8197708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 60 - 166
Target Start/End: Complemental strand, 8299313 - 8299204
Alignment:
Q  60 tatttatagtctaaaacaagccttaagtcattaatacagtcaacgaaaacaagttagtggttgt---aaccgtccaaacccacattaatggctctgaatc 156  Q
    ||||||||| |||||||||  |||| |||||||||||||||||  |||||  ||| ||||||||   |||||| |||||||| ||||||| |||||||||    
T  8299313 tatttatagcctaaaacaattcttaggtcattaatacagtcaataaaaacgtgttggtggttgttgtaaccgttcaaacccaaattaatgactctgaatc 8299214  T
Q  157 tttccggatt 166  Q
    ||||||||||    
T  8299213 tttccggatt 8299204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 213 - 298
Target Start/End: Original strand, 26279297 - 26279384
Alignment:
Q  213 aaaacaaaggtacatttcggattttattttccggaatgcatca--gtcatgaccggtggtctgcaccacacgtttttgtcggtggtca 298  Q
    ||||||||||| |||| ||||||||||||||| ||||| ||||  |||||| |||||||| ||||||||| ||||||||| |||||||    
T  26279297 aaaacaaaggtgcattccggattttattttccagaatgaatcagtgtcatggccggtggtttgcaccacatgtttttgtcagtggtca 26279384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 247 - 298
Target Start/End: Complemental strand, 38679322 - 38679271
Alignment:
Q  247 aatgcatcagtcatgaccggtggtctgcaccacacgtttttgtcggtggtca 298  Q
    ||||||||||||||| ||||||||||||||||||||||||||| ||||||||    
T  38679322 aatgcatcagtcatggccggtggtctgcaccacacgtttttgttggtggtca 38679271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 233 - 298
Target Start/End: Original strand, 3556887 - 3556952
Alignment:
Q  233 attttattttccggaatgcatcagtcatgaccggtggtctgcaccacacgtttttgtcggtggtca 298  Q
    ||||||| || |||||||||||||||||  |||||||| |||| ||||||||||||||||||||||    
T  3556887 attttatatttcggaatgcatcagtcattgccggtggtttgcatcacacgtttttgtcggtggtca 3556952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 233 - 294
Target Start/End: Complemental strand, 16513462 - 16513401
Alignment:
Q  233 attttattttccggaatgcatcagtcatgaccggtggtctgcaccacacgtttttgtcggtg 294  Q
    ||||||| ||||| || |||||||||||| ||||||||||||| ||||||||||||||||||    
T  16513462 attttatattccgaaaagcatcagtcatggccggtggtctgcatcacacgtttttgtcggtg 16513401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 245 - 295
Target Start/End: Original strand, 12785434 - 12785484
Alignment:
Q  245 ggaatgcatcagtcatgaccggtggtctgcaccacacgtttttgtcggtgg 295  Q
    ||||| ||||||||||| |||||||||| ||||||||||||||||||||||    
T  12785434 ggaatacatcagtcatggccggtggtctacaccacacgtttttgtcggtgg 12785484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 241 - 298
Target Start/End: Original strand, 8734967 - 8735024
Alignment:
Q  241 ttccggaatgcatcagtcatgaccggtggtctgcaccacacgtttttgtcggtggtca 298  Q
    |||| ||||||||||||||||  || |||||||||||||||||||||||| |||||||    
T  8734967 ttccagaatgcatcagtcatggtcgatggtctgcaccacacgtttttgtctgtggtca 8735024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 208 - 298
Target Start/End: Complemental strand, 11719817 - 11719725
Alignment:
Q  208 tccgtaaaacaaaggtacatttcggattttattttccggaatgcatcagt--catgaccggtggtctgcaccacacgtttttgtcggtggtca 298  Q
    |||| |||||| | || |||| |||||| |||||| |||| |||||||||  ||||  ||||||||||||||||| |||||||||||||||||    
T  11719817 tccggaaaacagatgtgcattccggattatatttttcggactgcatcagtgtcatggtcggtggtctgcaccacatgtttttgtcggtggtca 11719725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 26 - 75
Target Start/End: Original strand, 15858831 - 15858880
Alignment:
Q  26 tgaagaatgaaggtatttgttgaagttggaagcttatttatagtctaaaa 75  Q
    ||||||||||||||||||||||||| ||||||| ||||||||| ||||||    
T  15858831 tgaagaatgaaggtatttgttgaagatggaagcctatttatagcctaaaa 15858880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 247 - 298
Target Start/End: Complemental strand, 8299077 - 8299026
Alignment:
Q  247 aatgcatcagtcatgaccggtggtctgcaccacacgtttttgtcggtggtca 298  Q
    ||||||||||||||| |||||| |||||||||| |||||||||| |||||||    
T  8299077 aatgcatcagtcatggccggtgatctgcaccacgcgtttttgtcagtggtca 8299026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 245 - 295
Target Start/End: Original strand, 12723951 - 12724001
Alignment:
Q  245 ggaatgcatcagtcatgaccggtggtctgcaccacacgtttttgtcggtgg 295  Q
    ||||| ||||||||||| || ||||||| ||||||||||||||||||||||    
T  12723951 ggaatacatcagtcatggccagtggtctacaccacacgtttttgtcggtgg 12724001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 20 - 63
Target Start/End: Complemental strand, 2606119 - 2606076
Alignment:
Q  20 gtgaactgaagaatgaaggtatttgttgaagttggaagcttatt 63  Q
    ||||| ||||||||||||||||||||||||| ||||||| ||||    
T  2606119 gtgaagtgaagaatgaaggtatttgttgaagatggaagcctatt 2606076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 208 - 298
Target Start/End: Complemental strand, 9715189 - 9715096
Alignment:
Q  208 tccgtaaaacaaaggtacatttcggattttattttccggaatgcatca--gtcatgaccggtggtctgcaccacacg-tttttgtcggtggtca 298  Q
    |||| ||| |||| || |||| |||||||||||||||||||||||| |  ||||||  ||||| | ||||||||| | ||||||||||||||||    
T  9715189 tccggaaatcaaaagtgcattccggattttattttccggaatgcattagtgtcatggtcggtgctttgcaccacatgttttttgtcggtggtca 9715096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 26 - 75
Target Start/End: Original strand, 23252487 - 23252536
Alignment:
Q  26 tgaagaatgaaggtatttgttgaagttggaagcttatttatagtctaaaa 75  Q
    ||||||||||||| ||||||| ||| || ||| |||||||||||||||||    
T  23252487 tgaagaatgaaggaatttgtttaagatgcaagtttatttatagtctaaaa 23252536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 101; Significance: 6e-50; HSPs: 59)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 18 - 166
Target Start/End: Original strand, 33281091 - 33281239
Alignment:
Q  18 aggtgaactgaagaatgaaggtatttgttgaagttggaagcttatttatagtctaaaacaagccttaagtcattaatacagtcaacgaaaacaagttagt 117  Q
    ||||||| ||||||||||||||||||||||||| || |||| ||||||||| |||||||||| |||| |||||||||||| |||| ||||||  ||||||    
T  33281091 aggtgaagtgaagaatgaaggtatttgttgaagatgtaagcctatttatagcctaaaacaagtcttaggtcattaatacaatcaatgaaaacgtgttagt 33281190  T
Q  118 ggttgtaaccgtccaaacccacattaatggctctgaatctttccggatt 166  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||    
T  33281191 ggttgtaaccgtccaaacccacattaatggctctgaatctttctggatt 33281239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 18 - 166
Target Start/End: Original strand, 51538650 - 51538798
Alignment:
Q  18 aggtgaactgaagaatgaaggtatttgttgaagttggaagcttatttatagtctaaaacaagccttaagtcattaatacagtcaacgaaaacaagttagt 117  Q
    ||||||| ||||||||||||||||||||||||| ||||||| ||||||||| |||||||||| | |||||||||||||||||||| ||||||| ||| ||    
T  51538650 aggtgaagtgaagaatgaaggtatttgttgaagatggaagcatatttatagcctaaaacaagtcctaagtcattaatacagtcaatgaaaacatgttggt 51538749  T
Q  118 ggttgtaaccgtccaaacccacattaatggctctgaatctttccggatt 166  Q
    ||||| ||| ||||||||||||||||||||| |||||||||||||||||    
T  51538750 ggttgcaactgtccaaacccacattaatggccctgaatctttccggatt 51538798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 18 - 164
Target Start/End: Complemental strand, 52417066 - 52416917
Alignment:
Q  18 aggtgaactgaagaatgaaggtatttgttgaagttggaagcttatttatagtctaaaacaagccttaagtcattaatacagtcaacgaaaacaagttagt 117  Q
    ||||||| |||||||||| |||||||||||||| ||||||| ||||||||| |||||||||| |||| ||||||||||||||||| ||||||  ||||||    
T  52417066 aggtgaagtgaagaatgagggtatttgttgaagatggaagcctatttatagcctaaaacaagtcttaggtcattaatacagtcaatgaaaacgtgttagt 52416967  T
Q  118 gg---ttgtaaccgtccaaacccacattaatggctctgaatctttccgga 164  Q
    ||   |||||||||||||||||||||||||||||||||||||||||||||    
T  52416966 ggttgttgtaaccgtccaaacccacattaatggctctgaatctttccgga 52416917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 18 - 164
Target Start/End: Original strand, 31093111 - 31093257
Alignment:
Q  18 aggtgaactgaagaatgaaggtatttgttgaagttggaagcttatttatagtctaaaacaagccttaagtcattaatacagtcaacgaaaacaagttagt 117  Q
    ||||||| ||||||||||||||||||||||||| ||||||| ||||||||| |||||||||| | || ||||||||||||||||| || | |  ||||||    
T  31093111 aggtgaagtgaagaatgaaggtatttgttgaagatggaagcctatttatagcctaaaacaagtcataggtcattaatacagtcaatgagatcgtgttagt 31093210  T
Q  118 ggttgtaaccgtccaaacccacattaatggctctgaatctttccgga 164  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||    
T  31093211 ggttgtaaccgtccaaacccacaataatggctctgaatctttccgga 31093257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 18 - 164
Target Start/End: Original strand, 35158724 - 35158870
Alignment:
Q  18 aggtgaactgaagaatgaaggtatttgttgaagttggaagcttatttatagtctaaaacaagccttaagtcattaatacagtcaacgaaaacaagttagt 117  Q
    ||||||| ||||||||||||||||||||||||| ||||||| ||||||||| |||||||||| | || |||||||||||||| || ||||||  ||||||    
T  35158724 aggtgaagtgaagaatgaaggtatttgttgaagatggaagcctatttatagcctaaaacaagtcctaggtcattaatacagtaaatgaaaacgtgttagt 35158823  T
Q  118 ggttgtaaccgtccaaacccacattaatggctctgaatctttccgga 164  Q
    |||| |||||||||||||||||| |||||||||||||||||||||||    
T  35158824 ggttctaaccgtccaaacccacaataatggctctgaatctttccgga 35158870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 18 - 166
Target Start/End: Original strand, 16023878 - 16024026
Alignment:
Q  18 aggtgaactgaagaatgaaggtatttgttgaagttggaagcttatttatagtctaaaacaagccttaagtcattaatacagtcaacgaaaacaagttagt 117  Q
    ||||||| ||||||||||||||||||||||||  ||||||| ||||||||| |||||||||| | || || |||||||||||||| ||||||  ||||||    
T  16023878 aggtgaagtgaagaatgaaggtatttgttgaatatggaagcctatttatagcctaaaacaagtcataggttattaatacagtcaatgaaaacgtgttagt 16023977  T
Q  118 ggttgtaaccgtccaaacccacattaatggctctgaatctttccggatt 166  Q
    ||||| ||||||||||||||||||||||| |||||||||||||||||||    
T  16023978 ggttgcaaccgtccaaacccacattaatgactctgaatctttccggatt 16024026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 26 - 166
Target Start/End: Complemental strand, 28780900 - 28780760
Alignment:
Q  26 tgaagaatgaaggtatttgttgaagttggaagcttatttatagtctaaaacaagccttaagtcattaatacagtcaacgaaaacaagttagtggttgtaa 125  Q
    ||||||||||||||||||||||||| ||||||| ||||||||| |||||||||| | || ||||||||||||||||| ||||||  ||||||||||||||    
T  28780900 tgaagaatgaaggtatttgttgaagatggaagcctatttatagcctaaaacaagtcatatgtcattaatacagtcaatgaaaacgtgttagtggttgtaa 28780801  T
Q  126 ccgtccaaacccacattaatggctctgaatctttccggatt 166  Q
    ||| ||||| |||||||||||||||||||||||||| ||||    
T  28780800 ccgcccaaaaccacattaatggctctgaatctttccagatt 28780760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 18 - 166
Target Start/End: Original strand, 1602789 - 1602936
Alignment:
Q  18 aggtgaactgaagaatgaaggtatttgttgaagttggaagcttatttatagtctaaaacaagccttaagtcattaatacagtcaacgaaaacaagttagt 117  Q
    ||||||| ||||||||||||||||||||||||| || |||| ||||||||| |||||||||| | || |||||||||||||||||  |||||  ||||||    
T  1602789 aggtgaagtgaagaatgaaggtatttgttgaagatgaaagcctatttatagcctaaaacaagtcctaggtcattaatacagtcaa-taaaacgtgttagt 1602887  T
Q  118 ggttgtaaccgtccaaacccacattaatggctctgaatctttccggatt 166  Q
    ||||||||||||||||| ||||||||||| |||||||||||||||||||    
T  1602888 ggttgtaaccgtccaaatccacattaatgactctgaatctttccggatt 1602936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 26 - 166
Target Start/End: Original strand, 40728039 - 40728179
Alignment:
Q  26 tgaagaatgaaggtatttgttgaagttggaagcttatttatagtctaaaacaagccttaagtcattaatacagtcaacgaaaacaagttagtggttgtaa 125  Q
    ||||||||||||||||||||||||| || |||| ||||||||| |||||||||| | || ||||||||||||||||| ||||||  ||||||||||||||    
T  40728039 tgaagaatgaaggtatttgttgaagatgaaagcctatttatagcctaaaacaagtcctaggtcattaatacagtcaatgaaaacgtgttagtggttgtaa 40728138  T
Q  126 ccgtccaaacccacattaatggctctgaatctttccggatt 166  Q
    || |||| |||||||||||||||| ||||||||||||||||    
T  40728139 ccatccatacccacattaatggctatgaatctttccggatt 40728179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 26 - 166
Target Start/End: Original strand, 45229083 - 45229223
Alignment:
Q  26 tgaagaatgaaggtatttgttgaagttggaagcttatttatagtctaaaacaagccttaagtcattaatacagtcaacgaaaacaagttagtggttgtaa 125  Q
    |||||||||||  |||||||||||| ||||| | ||||||||| |||||||||| | || ||||||||||||||| | ||||||  ||||||||||||||    
T  45229083 tgaagaatgaatatatttgttgaagatggaatcctatttatagcctaaaacaagtcctaggtcattaatacagtccatgaaaacgtgttagtggttgtaa 45229182  T
Q  126 ccgtccaaacccacattaatggctctgaatctttccggatt 166  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  45229183 ccgtccaaacccacattaatggctctgaatctttccggatt 45229223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 18 - 166
Target Start/End: Original strand, 49374323 - 49374470
Alignment:
Q  18 aggtgaactgaagaatgaaggtatttgttgaagttggaagcttatttatagtctaaaacaagccttaagtcattaatacagtcaacgaaaacaagttagt 117  Q
    ||||||| ||||||||| |||| |||||||||| ||||||| ||||||||| |||||||||| | || ||||||| ||||||||| ||||||  ||||||    
T  49374323 aggtgaagtgaagaatggaggtttttgttgaagatggaagcctatttatagcctaaaacaagtcataggtcatta-tacagtcaatgaaaacgtgttagt 49374421  T
Q  118 ggttgtaaccgtccaaacccacattaatggctctgaatctttccggatt 166  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||    
T  49374422 ggttgtaactgtccaaacccacattaatggctctgaatctttccggatt 49374470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 18 - 151
Target Start/End: Complemental strand, 168673 - 168540
Alignment:
Q  18 aggtgaactgaagaatgaaggtatttgttgaagttggaagcttatttatagtctaaaacaagccttaagtcattaatacagtcaacgaaaacaagttagt 117  Q
    ||||||| ||||||||||||||||||||||||| ||||||  |||||||||||||||||||| | || ||||||||||||||||| ||||||  ||||||    
T  168673 aggtgaagtgaagaatgaaggtatttgttgaagatggaaggctatttatagtctaaaacaagtcataggtcattaatacagtcaatgaaaacgtgttagt 168574  T
Q  118 ggttgtaaccgtccaaacccacattaatggctct 151  Q
    |||||||| ||||||||||||||||| |||||||    
T  168573 ggttgtaaacgtccaaacccacattagtggctct 168540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 16 - 164
Target Start/End: Original strand, 45462254 - 45462402
Alignment:
Q  16 ataggtgaactgaagaatgaaggtatttgttgaagttggaagcttatttatagtctaaaacaagccttaagtcattaatacagtcaacgaaaacaagtta 115  Q
    ||||||||| |||||||||||| |||||||||||| || |||  ||||||||| |||||||||| | ||  |||||||||||||||| ||||||  || |    
T  45462254 ataggtgaagtgaagaatgaagatatttgttgaagatgaaagtctatttatagcctaaaacaagtcatagatcattaatacagtcaatgaaaacgtgtca 45462353  T
Q  116 gtggttgtaaccgtccaaacccacattaatggctctgaatctttccgga 164  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||    
T  45462354 gtggttgtaaccgtccaaacccacaataatggctctgaatctttccgga 45462402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 20 - 151
Target Start/End: Complemental strand, 38551401 - 38551270
Alignment:
Q  20 gtgaactgaagaatgaaggtatttgttgaagttggaagcttatttatagtctaaaacaagccttaagtcattaatacagtcaacgaaaacaagttagtgg 119  Q
    ||||| ||||||||||||||||||||||||| ||||||| ||||||||| |||||||||| | || ||||||| ||||||||| ||||||  ||||||||    
T  38551401 gtgaagtgaagaatgaaggtatttgttgaagatggaagcctatttatagcctaaaacaagtcctaggtcattagtacagtcaatgaaaacgtgttagtgg 38551302  T
Q  120 ttgtaaccgtccaaacccacattaatggctct 151  Q
    ||||||||||||||||| ||||||||||||||    
T  38551301 ttgtaaccgtccaaacctacattaatggctct 38551270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 18 - 151
Target Start/End: Complemental strand, 2013866 - 2013733
Alignment:
Q  18 aggtgaactgaagaatgaaggtatttgttgaagttggaagcttatttatagtctaaaacaagccttaagtcattaatacagtcaacgaaaacaagttagt 117  Q
    ||||||| ||||||||||||||||||||||||| |||||||  |||||||| |||||||||| | || ||||||||||||||||| ||||||  ||||||    
T  2013866 aggtgaagtgaagaatgaaggtatttgttgaagatggaagccaatttatagcctaaaacaagtcctaggtcattaatacagtcaatgaaaacgtgttagt 2013767  T
Q  118 ggttgtaaccgtccaaacccacattaatggctct 151  Q
    ||||||||||||||||| ||||||||||| ||||    
T  2013766 ggttgtaaccgtccaaatccacattaatgactct 2013733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 18 - 151
Target Start/End: Complemental strand, 4190007 - 4189874
Alignment:
Q  18 aggtgaactgaagaatgaaggtatttgttgaagttggaagcttatttatagtctaaaacaagccttaagtcattaatacagtcaacgaaaacaagttagt 117  Q
    ||||||| ||||||||||||||||||||||||| ||||||| ||||||||| |||||||||| | || |||||||||| ||||||  |||||  ||||||    
T  4190007 aggtgaagtgaagaatgaaggtatttgttgaagatggaagcctatttatagcctaaaacaagtcctaggtcattaatatagtcaataaaaacgtgttagt 4189908  T
Q  118 ggttgtaaccgtccaaacccacattaatggctct 151  Q
    ||||||||||||||||||||||||||||| ||||    
T  4189907 ggttgtaaccgtccaaacccacattaatgactct 4189874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 18 - 164
Target Start/End: Original strand, 30003616 - 30003764
Alignment:
Q  18 aggtgaactgaagaatgaaggtatttgttgaagttggaagcttatttatagtctaa--aacaagccttaagtcattaatacagtcaacgaaaacaagtta 115  Q
    ||||||| ||||||||||||||||||||||||| ||||||| ||||||||| ||||  |||||| | || ||||||||||||||||| ||||||  ||||    
T  30003616 aggtgaagtgaagaatgaaggtatttgttgaagatggaagcctatttatagcctaataaacaagtcctaggtcattaatacagtcaatgaaaacgtgtta 30003715  T
Q  116 gtggttgtaaccgtccaaacccacattaatggctctgaatctttccgga 164  Q
     || ||||||||||||||||||||| ||||| |||||||||||||||||    
T  30003716 ttgcttgtaaccgtccaaacccacaataatgactctgaatctttccgga 30003764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 18 - 151
Target Start/End: Complemental strand, 28311024 - 28310890
Alignment:
Q  18 aggtgaactgaagaatgaaggtatttgttgaagttggaagcttatttatagtctaaaac-aagccttaagtcattaatacagtcaacgaaaacaagttag 116  Q
    ||||||| ||||||||||||||||||||||||| ||||||| |||||||||| |||||| ||| |||| ||||||||||| ||||| ||||||  |||||    
T  28311024 aggtgaaatgaagaatgaaggtatttgttgaagatggaagcctatttatagtataaaacaaagtcttaggtcattaatacggtcaatgaaaacgtgttag 28310925  T
Q  117 tggttgtaaccgtccaaacccacattaatggctct 151  Q
    ||||||||||||| |||||||||||||||| ||||    
T  28310924 tggttgtaaccgttcaaacccacattaatgactct 28310890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 18 - 151
Target Start/End: Original strand, 4048138 - 4048271
Alignment:
Q  18 aggtgaactgaagaatgaaggtatttgttgaagttggaagcttatttatagtctaaaacaagccttaagtcattaatacagtcaacgaaaacaagttagt 117  Q
    ||||||| ||||||||||||||||||||||||| ||||||| ||||||||| |||||||||| | || || ||||||||| |||| ||||||  ||||||    
T  4048138 aggtgaagtgaagaatgaaggtatttgttgaagatggaagcctatttatagcctaaaacaagtcctaggttattaatacaatcaatgaaaacgtgttagt 4048237  T
Q  118 ggttgtaaccgtccaaacccacattaatggctct 151  Q
    ||||||||||||||||||| ||||||||| ||||    
T  4048238 ggttgtaaccgtccaaacctacattaatgactct 4048271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 16 - 166
Target Start/End: Complemental strand, 43842012 - 43841859
Alignment:
Q  16 ataggtgaactgaagaatgaaggtatttgttgaagttggaagcttatttatagtctaaaacaagccttaagtcattaatacagtcaacgaaaacaagtta 115  Q
    ||||||||| ||||||||||| ||||||||||||| || |||  ||||||||| |||||||||| | || |||||||||||||||||  |||||   |||    
T  43842012 ataggtgaattgaagaatgaatgtatttgttgaagatgaaagtctatttatagcctaaaacaagtcataggtcattaatacagtcaattaaaacgtctta 43841913  T
Q  116 gtgg---ttgtaaccgtccaaacccacattaatggctctgaatctttccggatt 166  Q
    ||||   |||||||||||||||||||||||||||||| ||||||||||||||||    
T  43841912 gtggttgttgtaaccgtccaaacccacattaatggctatgaatctttccggatt 43841859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 18 - 159
Target Start/End: Complemental strand, 9036232 - 9036089
Alignment:
Q  18 aggtgaactgaagaatgaaggtatttgttgaagttggaagcttatttatagtctaaaacaagccttaagtcattaatacagtcaacgaaaacaagttagt 117  Q
    ||||||| ||||||||||| ||||||||||||| || |||| ||||||||| |||||| ||| | |||||||||||||||||||| ||||||  ||||||    
T  9036232 aggtgaaatgaagaatgaatgtatttgttgaagatgaaagcctatttatagcctaaaa-aagtcctaagtcattaatacagtcaatgaaaacgtgttagt 9036134  T
Q  118 ggttgt---aaccgtccaaacccacattaatggctctgaatcttt 159  Q
    ||||||   ||||||||||||||||||||||| ||||||||||||    
T  9036133 ggttgttgtaaccgtccaaacccacattaatgactctgaatcttt 9036089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 18 - 151
Target Start/End: Original strand, 6963459 - 6963592
Alignment:
Q  18 aggtgaactgaagaatgaaggtatttgttgaagttggaagcttatttatagtctaaaacaagccttaagtcattaatacagtcaacgaaaacaagttagt 117  Q
    ||||||| ||||||||||||||||||||||||| ||||||| ||||||||| |||||| ||| | || ||||||| || |||||| |||||   ||||||    
T  6963459 aggtgaagtgaagaatgaaggtatttgttgaagatggaagcctatttatagcctaaaataagtcctaggtcattactatagtcaatgaaaatgtgttagt 6963558  T
Q  118 ggttgtaaccgtccaaacccacattaatggctct 151  Q
    | ||||||||||||||||||||||||||||||||    
T  6963559 gattgtaaccgtccaaacccacattaatggctct 6963592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 18 - 166
Target Start/End: Complemental strand, 38218398 - 38218247
Alignment:
Q  18 aggtgaactgaagaatgaaggtatttgttgaagttggaagcttatttatagtctaaaacaagccttaagtcattaatacagtcaacgaaaacaagttagt 117  Q
    ||||||| ||||||||| ||||||||||||||| ||||||| ||||||||| ||||||||||   || ||||||||||||||||| ||||||  ||||||    
T  38218398 aggtgaagtgaagaatgtaggtatttgttgaagatggaagcctatttataggctaaaacaagttctaggtcattaatacagtcaatgaaaacgtgttagt 38218299  T
Q  118 gg---ttgtaaccgtccaaacccacattaatggctctgaatctttccggatt 166  Q
    ||   |||||| ||||||||||||||||| ||||||| || |||||||||||    
T  38218298 ggttgttgtaatcgtccaaacccacattagtggctctaaacctttccggatt 38218247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 30 - 151
Target Start/End: Original strand, 45924615 - 45924736
Alignment:
Q  30 gaatgaaggtatttgttgaagttggaagcttatttatagtctaaaacaagccttaagtcattaatacagtcaacgaaaacaagttagtggttgtaaccgt 129  Q
    ||||||||||||||||||||| | ||| | ||||||||| |||||||||| | || ||||||||||||||||| ||||||  ||||||||||| ||||||    
T  45924615 gaatgaaggtatttgttgaagattgaaacctatttatagcctaaaacaagtcataggtcattaatacagtcaatgaaaacgtgttagtggttgcaaccgt 45924714  T
Q  130 ccaaacccacattaatggctct 151  Q
    ||||||||||||||||||||||    
T  45924715 ccaaacccacattaatggctct 45924736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 18 - 159
Target Start/End: Original strand, 55136670 - 55136814
Alignment:
Q  18 aggtgaactgaagaatgaaggtatttgttgaagttggaagcttatttatagtctaaaacaagccttaagtcattaatacagtcaacgaaaacaagttagt 117  Q
    ||||||| ||||||||||||||||||||||||| || |||| ||||||||| |||||||||| | || |||||||||||| |||| || |||  ||||||    
T  55136670 aggtgaagtgaagaatgaaggtatttgttgaagatgaaagcctatttatagcctaaaacaagtcataggtcattaatacaatcaatgataacgtgttagt 55136769  T
Q  118 g---gttgtaaccgtccaaacccacattaatggctctgaatcttt 159  Q
    |   ||||||||||||||||||||||||||||| | |||||||||    
T  55136770 ggttgttgtaaccgtccaaacccacattaatggatttgaatcttt 55136814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 18 - 151
Target Start/End: Complemental strand, 15542973 - 15542841
Alignment:
Q  18 aggtgaactgaagaatgaaggtatttgttgaagttggaagcttatttatagtctaaaacaagccttaagtcattaatacagtcaacgaaaacaagttagt 117  Q
    ||||||| ||||||||||||||||||||||||| ||||||| ||||||||| |||||||||| | || ||||||| || |||||| ||||||  ||||||    
T  15542973 aggtgaagtgaagaatgaaggtatttgttgaagatggaagcctatttatagcctaaaacaagtcctaggtcattactatagtcaatgaaaacgtgttagt 15542874  T
Q  118 ggttgtaaccgtccaaacccacattaatggctct 151  Q
     ||| ||||||||||||||||||||||| |||||    
T  15542873 -gttttaaccgtccaaacccacattaattgctct 15542841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 33 - 166
Target Start/End: Complemental strand, 56463767 - 56463631
Alignment:
Q  33 tgaaggtatttgttgaagttggaagcttatttatagtctaaaacaagccttaagtcattaatacagtcaacgaaaacaagttagtggttgt---aaccgt 129  Q
    |||||||||||||||||| ||||||| ||||||||| |||||||||| |    ||||||||||||||||| |||||   ||||||||||||   ||||||    
T  56463767 tgaaggtatttgttgaagatggaagcctatttatagcctaaaacaagtccacggtcattaatacagtcaatgaaaatgtgttagtggttgttgtaaccgt 56463668  T
Q  130 ccaaacccacattaatggctctgaatctttccggatt 166  Q
    ||||||||||||||||||||| || ||||||||||||    
T  56463667 ccaaacccacattaatggctccgagtctttccggatt 56463631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 225 - 298
Target Start/End: Complemental strand, 2013595 - 2013522
Alignment:
Q  225 catttcggattttattttccggaatgcatcagtcatgaccggtggtctgcaccacacgtttttgtcggtggtca 298  Q
    ||||||||||||||| |||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  2013595 catttcggattttatattccagaatgcatcagtcatggccggtggtctgcaccacacgtttttgtcggtggtca 2013522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 18 - 151
Target Start/End: Original strand, 16451935 - 16452068
Alignment:
Q  18 aggtgaactgaagaatgaaggtatttgttgaagttggaagcttatttatagtctaaaacaagccttaagtcattaatacagtcaacgaaaacaagttagt 117  Q
    ||||||| |||||||||||||||| || ||||| ||||||| ||||||||| |||||||||| | ||  |||||| ||||||||| ||||||  ||||||    
T  16451935 aggtgaagtgaagaatgaaggtatctgctgaagatggaagcctatttatagcctaaaacaagtcctagatcattactacagtcaatgaaaacgtgttagt 16452034  T
Q  118 ggttgtaaccgtccaaacccacattaatggctct 151  Q
    |||||||||||| |||||  ||||||||| ||||    
T  16452035 ggttgtaaccgttcaaacatacattaatgactct 16452068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 208 - 298
Target Start/End: Original strand, 30003854 - 30003944
Alignment:
Q  208 tccgtaaaacaaaggtacatttcggattttattttccggaatgcatcagtcatgaccggtggtctgcaccacacgtttttgtcggtggtca 298  Q
    |||| |||||||  || |||| |||||||||| ||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||    
T  30003854 tccgaaaaacaagtgtgcattccggattttatattccggaatgcatcagtcatggccggtggtctgcatcacacgtttttgtcggtggtca 30003944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 213 - 298
Target Start/End: Complemental strand, 15542724 - 15542639
Alignment:
Q  213 aaaacaaaggtacatttcggattttattttccggaatgcatcagtcatgaccggtggtctgcaccacacgtttttgtcggtggtca 298  Q
    |||||| | ||||||| | |||||||||||||| ||||||||||||||| ||||||| ||||||||||||||||||||||||||||    
T  15542724 aaaacagatgtacattccagattttattttccgaaatgcatcagtcatggccggtggactgcaccacacgtttttgtcggtggtca 15542639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 18 - 151
Target Start/End: Complemental strand, 35320029 - 35319896
Alignment:
Q  18 aggtgaactgaagaatgaaggtatttgttgaagttggaagcttatttatagtctaaaacaagccttaagtcattaatacagtcaacgaaaacaagttagt 117  Q
    ||||||| || |||||||| ||||||||||||| ||||||| |||||||||  ||||||||| | || ||||||| || ||| || ||||||  ||||||    
T  35320029 aggtgaagtggagaatgaaagtatttgttgaagatggaagcctatttatagcttaaaacaagtcataggtcattactatagttaatgaaaacgtgttagt 35319930  T
Q  118 ggttgtaaccgtccaaacccacattaatggctct 151  Q
     ||||||||||||||||| |||||||||| ||||    
T  35319929 agttgtaaccgtccaaactcacattaatgactct 35319896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 208 - 299
Target Start/End: Original strand, 49374555 - 49374646
Alignment:
Q  208 tccgtaaaacaaaggtacatttcggattttattttccggaatgcatcagtcatgaccggtggtctgcaccacacgtttttgtcggtggtcag 299  Q
    |||| |||||| | || |||| ||||||||||  ||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||    
T  49374555 tccggaaaacagatgtgcattccggattttatactccggaatgcatcagccatggccggtggtctgcaccacacgtttttgtcggtggtcag 49374646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 225 - 299
Target Start/End: Original strand, 33281341 - 33281415
Alignment:
Q  225 catttcggattttattttccggaatgcatcagtcatgaccggtggtctgcaccacacgtttttgtcggtggtcag 299  Q
    ||||||||||||||| ||||||||||||||||| |||  |||||||||||||||||||||||||||| |||||||    
T  33281341 catttcggattttatattccggaatgcatcagtaatgggcggtggtctgcaccacacgtttttgtcgatggtcag 33281415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 233 - 298
Target Start/End: Original strand, 6963738 - 6963803
Alignment:
Q  233 attttattttccggaatgcatcagtcatgaccggtggtctgcaccacacgtttttgtcggtggtca 298  Q
    ||||||| |||||||||||||||||||||  |||||||||||||||||||||||||||||||||||    
T  6963738 attttatattccggaatgcatcagtcatggtcggtggtctgcaccacacgtttttgtcggtggtca 6963803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 225 - 298
Target Start/End: Complemental strand, 52416813 - 52416740
Alignment:
Q  225 catttcggattttattttccggaatgcatcagtcatgaccggtggtctgcaccacacgtttttgtcggtggtca 298  Q
    |||| |||||||||| ||||||||||||| |||||||  |||||||||||||||||||||||||||||||||||    
T  52416813 cattccggattttatattccggaatgcattagtcatggtcggtggtctgcaccacacgtttttgtcggtggtca 52416740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 225 - 298
Target Start/End: Original strand, 55136925 - 55136998
Alignment:
Q  225 catttcggattttattttccggaatgcatcagtcatgaccggtggtctgcaccacacgtttttgtcggtggtca 298  Q
    |||||| |||||||| ||||||||||||||||||||| ||||||||||||| ||||||||||||| ||||||||    
T  55136925 catttcagattttatattccggaatgcatcagtcatggccggtggtctgcatcacacgtttttgttggtggtca 55136998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 208 - 339
Target Start/End: Complemental strand, 4189753 - 4189622
Alignment:
Q  208 tccgtaaaacaaaggtacatttcggattttattttccggaatgcatcagtcatgaccggtggtctgcaccacacgtttttgtcggtggtcagatnnnnnn 307  Q
    |||| |||||| | || |||| ||||||||||  ||| |||||||||||||||| | ||||||||||||||||||||||||||||||||||  |          
T  4189753 tccggaaaacagatgttcattccggattttatactccagaatgcatcagtcatggctggtggtctgcaccacacgtttttgtcggtggtcaagtaaaaaa 4189654  T
Q  308 nnntgcgttttaccacgttttttgactgcatt 339  Q
       |||||||||||||||||||||| ||||||    
T  4189653 aaatgcgttttaccacgttttttgattgcatt 4189622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 225 - 296
Target Start/End: Original strand, 35158976 - 35159047
Alignment:
Q  225 catttcggattttattttccggaatgcatcagtcatgaccggtggtctgcaccacacgtttttgtcggtggt 296  Q
    |||| ||||||| || ||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||    
T  35158976 cattccggatttaatattccggaatgcatcagtcatggccggtggtctgcatcacacgtttttgtcggtggt 35159047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 225 - 295
Target Start/End: Original strand, 4048407 - 4048477
Alignment:
Q  225 catttcggattttattttccggaatgcatcagtcatgaccggtggtctgcaccacacgtttttgtcggtgg 295  Q
    |||| |||||||||| ||||||||||||||||||||| ||| ||||||||||||||||||||| |||||||    
T  4048407 cattacggattttatattccggaatgcatcagtcatggccgatggtctgcaccacacgtttttttcggtgg 4048477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 208 - 298
Target Start/End: Complemental strand, 9035997 - 9035907
Alignment:
Q  208 tccgtaaaacaaaggtacatttcggattttattttccggaatgcatcagtcatgaccggtggtctgcaccacacgtttttgtcggtggtca 298  Q
    |||| |||||| | || |||| |||||||||| |||| |||||||||||||||| |||||||||||||||||| |||||||||| ||||||    
T  9035997 tccggaaaacagatgtgcattccggattttatattccagaatgcatcagtcatggccggtggtctgcaccacatgtttttgtcgatggtca 9035907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 185 - 294
Target Start/End: Complemental strand, 28310806 - 28310697
Alignment:
Q  185 ctcgttcacaattatcactttaatccgtaaaacaaaggtacatttcggattttattttccggaatgcatcagtcatgaccggtggtctgcaccacacgtt 284  Q
    ||||||||| ||||||   |||||||| |||||| | || |||| |||||||||| ||||  |||||||||||||||  |||||||||| ||||||||||    
T  28310806 ctcgttcaccattatcgtattaatccggaaaacagaagtgcattccggattttatattccataatgcatcagtcatggtcggtggtctgtaccacacgtt 28310707  T
Q  285 tttgtcggtg 294  Q
    ||||||||||    
T  28310706 tttgtcggtg 28310697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 225 - 298
Target Start/End: Complemental strand, 35319759 - 35319686
Alignment:
Q  225 catttcggattttattttccggaatgcatcagtcatgaccggtggtctgcaccacacgtttttgtcggtggtca 298  Q
    |||| |||||||||| || |||||||||| ||||||| | ||||||||||||||||||||||||||||||||||    
T  35319759 cattccggattttatatttcggaatgcattagtcatggctggtggtctgcaccacacgtttttgtcggtggtca 35319686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 225 - 298
Target Start/End: Original strand, 45462495 - 45462568
Alignment:
Q  225 catttcggattttattttccggaatgcatcagtcatgaccggtggtctgcaccacacgtttttgtcggtggtca 298  Q
    |||| |||||||||| |||||||||||||||||||||  |||||||||||| || |||||||||||||||||||    
T  45462495 cattccggattttatattccggaatgcatcagtcatggtcggtggtctgcatcaaacgtttttgtcggtggtca 45462568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 230 - 298
Target Start/End: Original strand, 1603046 - 1603114
Alignment:
Q  230 cggattttattttccggaatgcatcagtcatgaccggtggtctgcaccacacgtttttgtcggtggtca 298  Q
    |||||||||| |||||||||||||||| |||| ||||||||||||| ||||| ||||||||||||||||    
T  1603046 cggattttatattccggaatgcatcagacatggccggtggtctgcatcacacatttttgtcggtggtca 1603114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 230 - 298
Target Start/End: Original strand, 16024128 - 16024195
Alignment:
Q  230 cggattttattttccggaatgcatcagtcatgaccggtggtctgcaccacacgtttttgtcggtggtca 298  Q
    |||||| ||| ||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||    
T  16024128 cggattatatattccggaatgcatcagtcatggccggtggtctgcaccacacg-ttttgtcggtggtca 16024195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 242 - 298
Target Start/End: Original strand, 52499595 - 52499651
Alignment:
Q  242 tccggaatgcatcagtcatgaccggtggtctgcaccacacgtttttgtcggtggtca 298  Q
    |||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||    
T  52499595 tccggaatgcatcagtcatggccggtggtctgcaccacacatttttgtcggtggtca 52499651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 231 - 298
Target Start/End: Original strand, 45229333 - 45229400
Alignment:
Q  231 ggattttattttccggaatgcatcagtcatgaccggtggtctgcaccacacgtttttgtcggtggtca 298  Q
    ||||| ||| ||||||||||||||||||||| ||||||||||||||||||| ||||| ||||||||||    
T  45229333 ggattgtatattccggaatgcatcagtcatggccggtggtctgcaccacacatttttatcggtggtca 45229400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 208 - 298
Target Start/End: Original strand, 40728267 - 40728357
Alignment:
Q  208 tccgtaaaacaaaggtacatttcggattttattttccggaatgcatcagtcatgaccggtggtctgcaccacacgtttttgtcggtggtca 298  Q
    ||||||||||| | || |||| |||| | ||  ||||||||||||||| | ||| ||||||||||||||||||||||||||||||||||||    
T  40728267 tccgtaaaacatatgtgcattccggaatgtagattccggaatgcatcaatgatggccggtggtctgcaccacacgtttttgtcggtggtca 40728357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 235 - 298
Target Start/End: Original strand, 31093374 - 31093437
Alignment:
Q  235 tttattttccggaatgcatcagtcatgaccggtggtctgcaccacacgtttttgtcggtggtca 298  Q
    ||||| ||||||||||||||||||||| ||||||||||||||| ||| ||||||| ||||||||    
T  31093374 tttatattccggaatgcatcagtcatggccggtggtctgcaccgcacatttttgttggtggtca 31093437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 241 - 298
Target Start/End: Complemental strand, 56463511 - 56463454
Alignment:
Q  241 ttccggaatgcatcagtcatgaccggtggtctgcaccacacgtttttgtcggtggtca 298  Q
    ||||||||||||||||||||| | ||||||||||||||||||||| |||| |||||||    
T  56463511 ttccggaatgcatcagtcatggcaggtggtctgcaccacacgtttatgtcagtggtca 56463454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 225 - 339
Target Start/End: Complemental strand, 168402 - 168289
Alignment:
Q  225 catttcggattttattttccggaatgcatcagtcatgaccggtggtctgcaccacacgtttttgtcggtggtcagatnnnnnnnnntgcgttttaccacg 324  Q
    |||||| |||||||| ||| ||||||| ||||||||| | |||||||||||||| || ||| ||||||||||||| |          |||||||||||||    
T  168402 catttcagattttatattctggaatgcttcagtcatggctggtggtctgcaccaaacatttatgtcggtggtcaggtcaaaaaaac-gcgttttaccacg 168304  T
Q  325 ttttttgactgcatt 339  Q
    |||||||||||||||    
T  168303 ttttttgactgcatt 168289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 247 - 298
Target Start/End: Complemental strand, 28780633 - 28780582
Alignment:
Q  247 aatgcatcagtcatgaccggtggtctgcaccacacgtttttgtcggtggtca 298  Q
    ||||||||||| ||| |||||||||||||||||| |||||||||||||||||    
T  28780633 aatgcatcagtgatggccggtggtctgcaccacatgtttttgtcggtggtca 28780582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 240 - 298
Target Start/End: Complemental strand, 38218141 - 38218083
Alignment:
Q  240 tttccggaatgcatcagtcatgaccggtggtctgcaccacacgtttttgtcggtggtca 298  Q
    |||||||||||||| ||||||| ||||||||||||||| | || |||||||| ||||||    
T  38218141 tttccggaatgcattagtcatggccggtggtctgcacctctcgcttttgtcgttggtca 38218083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 26 - 78
Target Start/End: Original strand, 20516682 - 20516734
Alignment:
Q  26 tgaagaatgaaggtatttgttgaagttggaagcttatttatagtctaaaacaa 78  Q
    ||||||||||||| ||||||||||| || |||| ||||||||| |||||||||    
T  20516682 tgaagaatgaaggaatttgttgaagatgcaagcctatttatagcctaaaacaa 20516734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 213 - 290
Target Start/End: Complemental strand, 38551144 - 38551065
Alignment:
Q  213 aaaacaaaggtacatttcggattttattttccggaatgcatca--gtcatgaccggtggtctgcaccacacgtttttgtc 290  Q
    ||||||||||| |||| |  |||||||||| ||||||||||||  |||||| | |||||| ||||||||| |||||||||    
T  38551144 aaaacaaaggtgcattccaaattttatttttcggaatgcatcagtgtcatggctggtggtttgcaccacatgtttttgtc 38551065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 18 - 78
Target Start/End: Complemental strand, 39807410 - 39807350
Alignment:
Q  18 aggtgaactgaagaatgaaggtatttgttgaagttggaagcttatttatagtctaaaacaa 78  Q
    ||||||| ||||||||||||| ||||||||||| || |||| |||||||||  ||||||||    
T  39807410 aggtgaagtgaagaatgaaggaatttgttgaagatgaaagcctatttatagcgtaaaacaa 39807350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 208 - 272
Target Start/End: Original strand, 45924857 - 45924921
Alignment:
Q  208 tccgtaaaacaaaggtacatttcggattttattttccggaatgcatcagtcatgaccggtggtct 272  Q
    |||| |||||| | || |||| |||||||||| ||| ||||||||||||||||| ||||||||||    
T  45924857 tccggaaaacagatgtgcattccggattttatattctggaatgcatcagtcatggccggtggtct 45924921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 256 - 298
Target Start/End: Original strand, 16452238 - 16452280
Alignment:
Q  256 gtcatgaccggtggtctgcaccacacgtttttgtcggtggtca 298  Q
    |||||| |||||||| ||||||||| |||||||||||||||||    
T  16452238 gtcatggccggtggtttgcaccacatgtttttgtcggtggtca 16452280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 99; Significance: 9e-49; HSPs: 39)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 99; E-Value: 9e-49
Query Start/End: Original strand, 18 - 164
Target Start/End: Complemental strand, 39318728 - 39318582
Alignment:
Q  18 aggtgaactgaagaatgaaggtatttgttgaagttggaagcttatttatagtctaaaacaagccttaagtcattaatacagtcaacgaaaacaagttagt 117  Q
    ||||||| |||| |||||||||||||||||||| ||||||| ||||||||| |||||||||| | || ||||||||||||||||| ||||||  ||||||    
T  39318728 aggtgaagtgaataatgaaggtatttgttgaagatggaagcctatttatagcctaaaacaagtcataggtcattaatacagtcaatgaaaacgtgttagt 39318629  T
Q  118 ggttgtaaccgtccaaacccacattaatggctctgaatctttccgga 164  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||    
T  39318628 ggttgtaaccgtccaaacccacaataatggctctgaatctttccgga 39318582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 18 - 164
Target Start/End: Complemental strand, 8240120 - 8239974
Alignment:
Q  18 aggtgaactgaagaatgaaggtatttgttgaagttggaagcttatttatagtctaaaacaagccttaagtcattaatacagtcaacgaaaacaagttagt 117  Q
    ||||||| ||||||||||||||||||||||||| ||||||| ||||||||| |||||||||| | || || ||||||||||| || ||||||  ||||||    
T  8240120 aggtgaagtgaagaatgaaggtatttgttgaagatggaagcctatttatagcctaaaacaagtcctatgttattaatacagttaatgaaaacgtgttagt 8240021  T
Q  118 ggttgtaaccgtccaaacccacattaatggctctgaatctttccgga 164  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||    
T  8240020 ggttgtaaccgtccaaacccacaataatggctctgaatctttccgga 8239974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 18 - 164
Target Start/End: Complemental strand, 40105382 - 40105236
Alignment:
Q  18 aggtgaactgaagaatgaaggtatttgttgaagttggaagcttatttatagtctaaaacaagccttaagtcattaatacagtcaacgaaaacaagttagt 117  Q
    ||||||| ||||||||||||||||||||||||| || |||| ||||||||| |||||||||| | || ||||||||||||||||| ||||||  ||||||    
T  40105382 aggtgaattgaagaatgaaggtatttgttgaagatgaaagcctatttatagcctaaaacaagtcctaggtcattaatacagtcaatgaaaacgtgttagt 40105283  T
Q  118 ggttgtaaccgtccaaacccacattaatggctctgaatctttccgga 164  Q
    ||||| ||||||||||||||||| ||||| |||||||||||||||||    
T  40105282 ggttgcaaccgtccaaacccacaataatgactctgaatctttccgga 40105236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 19 - 164
Target Start/End: Complemental strand, 35684147 - 35684002
Alignment:
Q  19 ggtgaactgaagaatgaaggtatttgttgaagttggaagcttatttatagtctaaaacaagccttaagtcattaatacagtcaacgaaaacaagttagtg 118  Q
    |||||| ||||||||||||||||||||||||| ||||||| ||||||||| ||||||||||   |  |||||||| |||||||| ||||||  |||||||    
T  35684147 ggtgaagtgaagaatgaaggtatttgttgaagatggaagcctatttatagcctaaaacaagtactgggtcattaaaacagtcaatgaaaacgtgttagtg 35684048  T
Q  119 gttgtaaccgtccaaacccacattaatggctctgaatctttccgga 164  Q
    |||||||||||||||||||||| |||||||||||||||||||||||    
T  35684047 gttgtaaccgtccaaacccacaataatggctctgaatctttccgga 35684002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 18 - 162
Target Start/End: Original strand, 11076233 - 11076377
Alignment:
Q  18 aggtgaactgaagaatgaaggtatttgttgaagttggaagcttatttatagtctaaaacaagccttaagtcattaatacagtcaacgaaaacaagttagt 117  Q
    ||||||| |||||||| |||||||||||||||  ||||||  |||||||||||||||||||| | || |||||||||||||||||  |||||  ||||||    
T  11076233 aggtgaagtgaagaattaaggtatttgttgaaaatggaagtctatttatagtctaaaacaagtcctaggtcattaatacagtcaataaaaacgtgttagt 11076332  T
Q  118 ggttgtaaccgtccaaacccacattaatggctctgaatctttccg 162  Q
    ||||||||||||||||||||||| ||||| |||||||||||||||    
T  11076333 ggttgtaaccgtccaaacccacaataatgactctgaatctttccg 11076377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 18 - 151
Target Start/End: Original strand, 6347300 - 6347433
Alignment:
Q  18 aggtgaactgaagaatgaaggtatttgttgaagttggaagcttatttatagtctaaaacaagccttaagtcattaatacagtcaacgaaaacaagttagt 117  Q
    ||||||| ||||||||||||||||||||||||| ||||||| | ||||||| |||||||||| | || ||||||| |||||| || ||||||  ||||||    
T  6347300 aggtgaaatgaagaatgaaggtatttgttgaagatggaagcatgtttatagcctaaaacaagtcctaggtcattagtacagtaaatgaaaacgtgttagt 6347399  T
Q  118 ggttgtaaccgtccaaacccacattaatggctct 151  Q
    ||||||||||||||||||||||||||||||||||    
T  6347400 ggttgtaaccgtccaaacccacattaatggctct 6347433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 18 - 151
Target Start/End: Original strand, 37098338 - 37098471
Alignment:
Q  18 aggtgaactgaagaatgaaggtatttgttgaagttggaagcttatttatagtctaaaacaagccttaagtcattaatacagtcaacgaaaacaagttagt 117  Q
    ||||||| ||||||||||||||||||||||||| || |||||||||||||| |||||||||| |  | |||||||||||||||||  |||||  ||||||    
T  37098338 aggtgaagtgaagaatgaaggtatttgttgaagatgaaagcttatttatagcctaaaacaagtcccatgtcattaatacagtcaataaaaacgtgttagt 37098437  T
Q  118 ggttgtaaccgtccaaacccacattaatggctct 151  Q
    ||||||||||||| ||||||||||||||||||||    
T  37098438 ggttgtaaccgtctaaacccacattaatggctct 37098471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 18 - 151
Target Start/End: Complemental strand, 43098678 - 43098545
Alignment:
Q  18 aggtgaactgaagaatgaaggtatttgttgaagttggaagcttatttatagtctaaaacaagccttaagtcattaatacagtcaacgaaaacaagttagt 117  Q
    ||||||| ||||||||||| ||||||||||||| ||||||| ||||||||| |||||||||| | || ||||||| || |||||| ||||||  ||||||    
T  43098678 aggtgaagtgaagaatgaatgtatttgttgaagatggaagcctatttatagcctaaaacaagtcctaggtcattattatagtcaatgaaaacgtgttagt 43098579  T
Q  118 ggttgtaaccgtccaaacccacattaatggctct 151  Q
    ||||||||||||||||||||||||||||||||||    
T  43098578 ggttgtaaccgtccaaacccacattaatggctct 43098545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 18 - 166
Target Start/End: Complemental strand, 39260425 - 39260274
Alignment:
Q  18 aggtgaactgaagaatgaaggtatttgttgaagttggaagcttatttatagtctaaaacaagccttaagtcattaatacagtcaacgaaaacaagtta-- 115  Q
    ||||||| ||||||||||| ||||||||||||| | ||||| ||||||||| |||||||||| | || |||||||||||||||||  |||||  ||||      
T  39260425 aggtgaagtgaagaatgaatgtatttgttgaagatagaagcctatttatagcctaaaacaagtcctaggtcattaatacagtcaataaaaacgtgttaat 39260326  T
Q  116 -gtggttgtaaccgtccaaacccacattaatggctctgaatctttccggatt 166  Q
     || |||||||||||||||||||||||||||| |||||||||||||||||||    
T  39260325 ggttgttgtaaccgtccaaacccacattaatgactctgaatctttccggatt 39260274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 20 - 151
Target Start/End: Original strand, 20091867 - 20091998
Alignment:
Q  20 gtgaactgaagaatgaaggtatttgttgaagttggaagcttatttatagtctaaaacaagccttaagtcattaatacagtcaacgaaaacaagttagtgg 119  Q
    ||||| ||||||||||||||||||||||||| ||||||| ||| ||||| |||||||||| | || ||||||| ||| ||||| ||||||  ||||||||    
T  20091867 gtgaagtgaagaatgaaggtatttgttgaagatggaagcctatatatagcctaaaacaagtcctatgtcattactacggtcaatgaaaacgtgttagtgg 20091966  T
Q  120 ttgtaaccgtccaaacccacattaatggctct 151  Q
    ||||||| ||||||||| ||||||||||||||    
T  20091967 ttgtaactgtccaaaccgacattaatggctct 20091998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 18 - 151
Target Start/End: Complemental strand, 23144241 - 23144107
Alignment:
Q  18 aggtgaactgaagaatgaaggtatttgttgaagttggaagcttatttatagtctaaaacaagccttaagtca-ttaatacagtcaacgaaaacaagttag 116  Q
    ||||||| ||||||||||||||||||||||||| ||||||| ||||||||  |||||||||| | || |||| ||| ||||||||| ||||||| |||||    
T  23144241 aggtgaagtgaagaatgaaggtatttgttgaagatggaagcctatttataacctaaaacaagtcctaggtcatttactacagtcaatgaaaacatgttag 23144142  T
Q  117 tggttgtaaccgtccaaacccacattaatggctct 151  Q
    ||||||||| |||||||||| ||||||||| ||||    
T  23144141 tggttgtaatcgtccaaacctacattaatgactct 23144107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 26 - 151
Target Start/End: Original strand, 627387 - 627512
Alignment:
Q  26 tgaagaatgaaggtatttgttgaagttggaagcttatttatagtctaaaacaagccttaagtcattaatacagtcaacgaaaacaagttagtggttgtaa 125  Q
    ||||||||||||||||||||||||| | ||||| ||||||||| |||||||||| ||||  |||||| ||||||||| ||||||  ||||||||||||||    
T  627387 tgaagaatgaaggtatttgttgaagatagaagcctatttatagcctaaaacaagtcttagttcattagtacagtcaatgaaaacttgttagtggttgtaa 627486  T
Q  126 ccgtccaaacccacattaatggctct 151  Q
    ||||||||| | ||||| ||||||||    
T  627487 ccgtccaaagctacattgatggctct 627512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 18 - 151
Target Start/End: Original strand, 32337815 - 32337948
Alignment:
Q  18 aggtgaactgaagaatgaaggtatttgttgaagttggaagcttatttatagtctaaaacaagccttaagtcattaatacagtcaacgaaaacaagttagt 117  Q
    ||||||| ||||||||||||||||||||||||| ||||||| ||||||||| ||||| |||| | || ||||||| |||| |||| ||||||  ||||||    
T  32337815 aggtgaagtgaagaatgaaggtatttgttgaagatggaagcctatttatagcctaaaccaagtcctaggtcattagtacaatcaatgaaaacgtgttagt 32337914  T
Q  118 ggttgtaaccgtccaaacccacattaatggctct 151  Q
    | ||||||||||||||||| ||||| ||||||||    
T  32337915 gattgtaaccgtccaaacctacattgatggctct 32337948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 26 - 151
Target Start/End: Complemental strand, 586536 - 586411
Alignment:
Q  26 tgaagaatgaaggtatttgttgaagttggaagcttatttatagtctaaaacaagccttaagtcattaatacagtcaacgaaaacaagttagtggttgtaa 125  Q
    ||||||||||||||||||||||||| | ||||| ||||||||| |||||||||| ||||  |||||| ||||||||| ||||||  ||||||||||||||    
T  586536 tgaagaatgaaggtatttgttgaagatagaagcctatttatagcctaaaacaagtcttagttcattagtacagtcaatgaaaacttgttagtggttgtaa 586437  T
Q  126 ccgtccaaacccacattaatggctct 151  Q
    ||||||||| | ||| | ||||||||    
T  586436 ccgtccaaagctacactgatggctct 586411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 18 - 151
Target Start/End: Complemental strand, 31701177 - 31701047
Alignment:
Q  18 aggtgaactgaagaatgaaggtatttgttgaagttggaagcttatttatagtctaaaacaagccttaagtcattaatacagtcaacgaaaacaagttagt 117  Q
    ||||||| ||||||||||||||||||||||||| ||||||| ||||||||| |||||||||| | || ||||||| ||||||||| ||||||  |||| |    
T  31701177 aggtgaagtgaagaatgaaggtatttgttgaagatggaagcctatttatagcctaaaacaagtcctaggtcattactacagtcaatgaaaacgtgttatt 31701078  T
Q  118 ggttgtaaccgtccaaacccacattaatggctct 151  Q
    |||| ||||||   |||||||||||||| |||||    
T  31701077 ggttataaccg---aaacccacattaatagctct 31701047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 230 - 298
Target Start/End: Complemental strand, 43098402 - 43098334
Alignment:
Q  230 cggattttattttccggaatgcatcagtcatgaccggtggtctgcaccacacgtttttgtcggtggtca 298  Q
    |||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  43098402 cggattttatcttccggaatgcatcagtcatggccggtggtctgcaccacacgtttttgtcggtggtca 43098334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 227 - 298
Target Start/End: Original strand, 20092138 - 20092209
Alignment:
Q  227 tttcggattttattttccggaatgcatcagtcatgaccggtggtctgcaccacacgtttttgtcggtggtca 298  Q
    ||||||||||||| ||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||    
T  20092138 tttcggattttatattccggaatgcatcagtcatggccggtggtctgcaccccacgtttttgtcggtggtca 20092209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 225 - 298
Target Start/End: Original strand, 11076486 - 11076559
Alignment:
Q  225 catttcggattttattttccggaatgcatcagtcatgaccggtggtctgcaccacacgtttttgtcggtggtca 298  Q
    ||||||||||||||| ||||||||||||||||||||| ||||||||||||| ||||||||||||||| ||||||    
T  11076486 catttcggattttatattccggaatgcatcagtcatggccggtggtctgcatcacacgtttttgtcgatggtca 11076559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 216 - 298
Target Start/End: Complemental strand, 23143992 - 23143910
Alignment:
Q  216 acaaaggtacatttcggattttattttccggaatgcatcagtcatgaccggtggtctgcaccacacgtttttgtcggtggtca 298  Q
    ||||||| ||||| |||||||||| ||  |||| |||||||||||| ||||||||||||||||||||||||||||||||||||    
T  23143992 acaaaggcacattccggattttatattttggaacgcatcagtcatggccggtggtctgcaccacacgtttttgtcggtggtca 23143910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 230 - 298
Target Start/End: Complemental strand, 39260167 - 39260099
Alignment:
Q  230 cggattttattttccggaatgcatcagtcatgaccggtggtctgcaccacacgtttttgtcggtggtca 298  Q
    |||||||||| ||||||||||||| ||||||| | ||||||||||||||||||||||||||||||||||    
T  39260167 cggattttatattccggaatgcattagtcatggctggtggtctgcaccacacgtttttgtcggtggtca 39260099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 18 - 109
Target Start/End: Original strand, 32947084 - 32947175
Alignment:
Q  18 aggtgaactgaagaatgaaggtatttgttgaagttggaagcttatttatagtctaaaacaagccttaagtcattaatacagtcaacgaaaac 109  Q
    ||||||| ||||||||||||||||||||||||| | ||||| || |||||| |||||||||| | || ||||||||||||||||| ||||||    
T  32947084 aggtgaagtgaagaatgaaggtatttgttgaagatagaagcctacttatagcctaaaacaagtcctaggtcattaatacagtcaatgaaaac 32947175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 225 - 299
Target Start/End: Complemental strand, 13546121 - 13546047
Alignment:
Q  225 catttcggattttattttccggaatgcatcagtcatgaccggtggtctgcaccacacgtttttgtcggtggtcag 299  Q
    |||| |||||||||| ||||||||||||| ||||||| | ||||||||||| |||||||||||||||||||||||    
T  13546121 cattccggattttatattccggaatgcattagtcatggctggtggtctgcatcacacgtttttgtcggtggtcag 13546047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 225 - 299
Target Start/End: Original strand, 13678352 - 13678426
Alignment:
Q  225 catttcggattttattttccggaatgcatcagtcatgaccggtggtctgcaccacacgtttttgtcggtggtcag 299  Q
    |||| |||||||||| ||||||||||||| ||||||| | ||||||||||| |||||||||||||||||||||||    
T  13678352 cattccggattttatattccggaatgcattagtcatggctggtggtctgcatcacacgtttttgtcggtggtcag 13678426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 208 - 298
Target Start/End: Original strand, 32947265 - 32947355
Alignment:
Q  208 tccgtaaaacaaaggtacatttcggattttattttccggaatgcatcagtcatgaccggtggtctgcaccacacgtttttgtcggtggtca 298  Q
    |||| |||||| | || |||| |||||||||| ||| ||||||||||||| ||| || |||||||||||||||||||||||||||||||||    
T  32947265 tccggaaaacagatgtgcattccggattttatattctggaatgcatcagttatggccagtggtctgcaccacacgtttttgtcggtggtca 32947355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 225 - 299
Target Start/End: Complemental strand, 40105129 - 40105055
Alignment:
Q  225 catttcggattttattttccggaatgcatcagtcatgaccggtggtctgcaccacacgtttttgtcggtggtcag 299  Q
    |||| |||||||||| |||||||||||||||||||||  |||||||| ||| |||||||||||||||||||||||    
T  40105129 cattccggattttatattccggaatgcatcagtcatggtcggtggtcagcatcacacgtttttgtcggtggtcag 40105055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 225 - 298
Target Start/End: Complemental strand, 35683895 - 35683822
Alignment:
Q  225 catttcggattttattttccggaatgcatcagtcatgaccggtggtctgcaccacacgtttttgtcggtggtca 298  Q
    |||| |||||||||| |||||| ||||||||||||||  |||||||||||| ||||||||||||||||||||||    
T  35683895 cattccggattttatattccgggatgcatcagtcatgggcggtggtctgcatcacacgtttttgtcggtggtca 35683822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 225 - 294
Target Start/End: Complemental strand, 39318475 - 39318406
Alignment:
Q  225 catttcggattttattttccggaatgcatcagtcatgaccggtggtctgcaccacacgtttttgtcggtg 294  Q
    |||| |||||||||| ||||||||||||||||||||| ||||||||||||| |||| |||||||||||||    
T  39318475 cattccggattttatattccggaatgcatcagtcatggccggtggtctgcatcacaagtttttgtcggtg 39318406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 208 - 299
Target Start/End: Original strand, 6347554 - 6347647
Alignment:
Q  208 tccgtaaaacaaaggtacatttcggattttattttccggaatgcatca--gtcatgaccggtggtctgcaccacacgtttttgtcggtggtcag 299  Q
    |||| ||||||||||| |||||| |||||||||||| |||||||| ||  |||||| || |||||||||||||||| ||||||||| |||||||    
T  6347554 tccggaaaacaaaggtgcatttcagattttattttctggaatgcaacaatgtcatggccagtggtctgcaccacacatttttgtcgatggtcag 6347647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 225 - 298
Target Start/End: Complemental strand, 8239868 - 8239795
Alignment:
Q  225 catttcggattttattttccggaatgcatcagtcatgaccggtggtctgcaccacacgtttttgtcggtggtca 298  Q
    |||| |||||||||| ||  ||||||||||||||||| ||||||||||||| ||||| ||||||||||||||||    
T  8239868 cattccggattttatattttggaatgcatcagtcatgcccggtggtctgcatcacacttttttgtcggtggtca 8239795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 119 - 166
Target Start/End: Complemental strand, 42131932 - 42131885
Alignment:
Q  119 gttgtaaccgtccaaacccacattaatggctctgaatctttccggatt 166  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||    
T  42131932 gttgtaaccgtccaaacccatattaatggctctgaatctttccggatt 42131885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 213 - 298
Target Start/End: Complemental strand, 586285 - 586198
Alignment:
Q  213 aaaacaaaggtacatttcggattttattttccggaatgcatcagt--catgaccggtggtctgcaccacacgtttttgtcggtggtca 298  Q
    ||||||||| |||||| ||||||||||||||||||||||||||||  |||| | |||  | || |||||| |||||||||||||||||    
T  586285 aaaacaaagctacattccggattttattttccggaatgcatcagtgtcatggctggttctttgtaccacatgtttttgtcggtggtca 586198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 246 - 298
Target Start/End: Complemental strand, 31700888 - 31700836
Alignment:
Q  246 gaatgcatcagtcatgaccggtggtctgcaccacacgtttttgtcggtggtca 298  Q
    ||||| |||||||||| ||||| ||||||||||||||||||||||||||||||    
T  31700888 gaatgtatcagtcatggccggtagtctgcaccacacgtttttgtcggtggtca 31700836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 230 - 298
Target Start/End: Complemental strand, 42131775 - 42131707
Alignment:
Q  230 cggattttattttccggaatgcatcagtcatgaccggtggtctgcaccacacgtttttgtcggtggtca 298  Q
    |||||| ||| |||| |||||||||||||||| | |||||||||||||| || ||||||||||||||||    
T  42131775 cggattatatattccagaatgcatcagtcatggctggtggtctgcaccatacatttttgtcggtggtca 42131707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 208 - 295
Target Start/End: Original strand, 32338069 - 32338157
Alignment:
Q  208 tccgtaaaacaaaggtacatttcggattttattttccggaatgcatca--gtcatgaccggtggtctgcaccacacgtttttgtcggtgg 295  Q
    |||| ||||||||||| |||| |||||||||||||| |||||||||||  ||||||  ||||||| ||||||||| ||||||||| ||||    
T  32338069 tccggaaaacaaaggtgcattccggattttattttctggaatgcatcagtgtcatg-gcggtggtttgcaccacatgtttttgtcagtgg 32338157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 213 - 257
Target Start/End: Original strand, 627638 - 627682
Alignment:
Q  213 aaaacaaaggtacatttcggattttattttccggaatgcatcagt 257  Q
    ||||||||| |||||| ||||||||||||||||||||||||||||    
T  627638 aaaacaaagctacattccggattttattttccggaatgcatcagt 627682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 112 - 151
Target Start/End: Complemental strand, 13546298 - 13546259
Alignment:
Q  112 gttagtggttgtaaccgtccaaacccacattaatggctct 151  Q
    |||||||||||||||||||||||| |||||||||||||||    
T  13546298 gttagtggttgtaaccgtccaaacacacattaatggctct 13546259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 112 - 151
Target Start/End: Original strand, 13678175 - 13678214
Alignment:
Q  112 gttagtggttgtaaccgtccaaacccacattaatggctct 151  Q
    |||||||||||||||||||||||| |||||||||||||||    
T  13678175 gttagtggttgtaaccgtccaaacacacattaatggctct 13678214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 247 - 291
Target Start/End: Original strand, 37098611 - 37098655
Alignment:
Q  247 aatgcatcagtcatgaccggtggtctgcaccacacgtttttgtcg 291  Q
    ||||||||||||||| ||| |||||||||||||||| ||||||||    
T  37098611 aatgcatcagtcatggccgttggtctgcaccacacggttttgtcg 37098655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 18 - 50
Target Start/End: Complemental strand, 42132001 - 42131969
Alignment:
Q  18 aggtgaactgaagaatgaaggtatttgttgaag 50  Q
    ||||||| |||||||||||||||||||||||||    
T  42132001 aggtgaagtgaagaatgaaggtatttgttgaag 42131969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 98; Significance: 3e-48; HSPs: 36)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 18 - 166
Target Start/End: Original strand, 47646921 - 47647072
Alignment:
Q  18 aggtgaactgaagaatgaaggtatttgttgaagttggaagcttatttatagtctaaaacaagccttaagtcattaatacagtcaacgaaaacaagttagt 117  Q
    ||||||| ||||||||||||||||||||||||| ||||||| ||||||||| |||||||||| | || ||||||||||||||||| ||||||  ||||||    
T  47646921 aggtgaagtgaagaatgaaggtatttgttgaagatggaagcctatttatagcctaaaacaagtcctaggtcattaatacagtcaatgaaaacgtgttagt 47647020  T
Q  118 g---gttgtaaccgtccaaacccacattaatggctctgaatctttccggatt 166  Q
    |   ||||||||||||||||||||||||||||||||||||||||||||||||    
T  47647021 ggttgttgtaaccgtccaaacccacattaatggctctgaatctttccggatt 47647072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 18 - 166
Target Start/End: Complemental strand, 26502324 - 26502173
Alignment:
Q  18 aggtgaactgaagaatgaaggtatttgttgaagttggaagcttatttatagtctaaaacaagccttaagtcattaatacagtcaacgaaaacaagttagt 117  Q
    ||||||| ||||||||| ||||||||||||||| ||||||| |||||||||||||||||||| | || ||||||||||||||||| ||||||  ||||||    
T  26502324 aggtgaagtgaagaatgtaggtatttgttgaagatggaagcctatttatagtctaaaacaagtcctaggtcattaatacagtcaatgaaaacgtgttagt 26502225  T
Q  118 gg---ttgtaaccgtccaaacccacattaatggctctgaatctttccggatt 166  Q
    ||   ||||||| |||||||||||||||||||||||||||||||||||||||    
T  26502224 ggttgttgtaactgtccaaacccacattaatggctctgaatctttccggatt 26502173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 18 - 166
Target Start/End: Original strand, 149331 - 149479
Alignment:
Q  18 aggtgaactgaagaatgaaggtatttgttgaagttggaagcttatttatagtctaaaacaagccttaagtcattaatacagtcaacgaaaacaagttagt 117  Q
    ||||||| ||||||||| | ||||||||||||| ||||||| ||||||||| |||||||||| | || ||||||||||||||||| ||||||  ||||||    
T  149331 aggtgaagtgaagaatgtaagtatttgttgaagatggaagcctatttatagcctaaaacaagtcataggtcattaatacagtcaatgaaaacgtgttagt 149430  T
Q  118 ggttgtaaccgtccaaacccacattaatggctctgaatctttccggatt 166  Q
    |||||||||||||||||||||| |||||| |||||||||||||||||||    
T  149431 ggttgtaaccgtccaaacccacgttaatgactctgaatctttccggatt 149479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 18 - 165
Target Start/End: Complemental strand, 47013848 - 47013701
Alignment:
Q  18 aggtgaactgaagaatgaaggtatttgttgaagttggaagcttatttatagtctaaaacaagccttaagtcattaatacagtcaacgaaaacaagttagt 117  Q
    ||||||| ||||||||||||||||||||||||| ||||| | ||||||||| |||||||||| | || ||||||||||| ||||| ||||||  ||||||    
T  47013848 aggtgaagtgaagaatgaaggtatttgttgaagatggaaacctatttatagcctaaaacaagtcctaggtcattaatacggtcaatgaaaacgtgttagt 47013749  T
Q  118 ggttgtaaccgtccaaacccacattaatggctctgaatctttccggat 165  Q
    |||||||||| ||||||||||||||||||||||||||||||| |||||    
T  47013748 ggttgtaaccatccaaacccacattaatggctctgaatcttttcggat 47013701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 18 - 166
Target Start/End: Complemental strand, 10509354 - 10509203
Alignment:
Q  18 aggtgaactgaagaatgaaggtatttgttgaagttggaagcttatttatagtctaaaacaagccttaagtcattaatacagtcaacgaaaacaagttagt 117  Q
    ||||||| ||||||||||||||||||||||||| | ||||| ||||||||| |||||| ||| | || ||||||||||||||||| ||||||  ||||||    
T  10509354 aggtgaagtgaagaatgaaggtatttgttgaagatagaagcctatttatagcctaaaagaagtcctaggtcattaatacagtcaatgaaaacgtgttagt 10509255  T
Q  118 gg---ttgtaaccgtccaaacccacattaatggctctgaatctttccggatt 166  Q
    ||   |||||||||||||||||||||||||||||||||||||||||||||||    
T  10509254 ggttgttgtaaccgtccaaacccacattaatggctctgaatctttccggatt 10509203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 18 - 151
Target Start/End: Original strand, 32529804 - 32529937
Alignment:
Q  18 aggtgaactgaagaatgaaggtatttgttgaagttggaagcttatttatagtctaaaacaagccttaagtcattaatacagtcaacgaaaacaagttagt 117  Q
    ||||||| ||||||||||||||||||||||||| ||||||| ||||||||| |||||||||| | || |||||||||||||| || ||||||  ||||||    
T  32529804 aggtgaagtgaagaatgaaggtatttgttgaagatggaagcctatttatagcctaaaacaagtcctaggtcattaatacagttaatgaaaacgtgttagt 32529903  T
Q  118 ggttgtaaccgtccaaacccacattaatggctct 151  Q
    ||||||||||||||||||||||||||||||||||    
T  32529904 ggttgtaaccgtccaaacccacattaatggctct 32529937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 18 - 166
Target Start/End: Complemental strand, 36402843 - 36402692
Alignment:
Q  18 aggtgaactgaagaatgaaggtatttgttgaagttggaagcttatttatagtctaaaacaagccttaagtcattaatacagtcaacgaaaacaagttagt 117  Q
    ||||||| ||||||||||||||||||||||||| ||||||| ||||||||  |||||||||| | || ||||||||||||||||| ||||||  ||||||    
T  36402843 aggtgaagtgaagaatgaaggtatttgttgaagatggaagcctatttataacctaaaacaagtcctaggtcattaatacagtcaatgaaaacgtgttagt 36402744  T
Q  118 gg---ttgtaaccgtccaaacccacattaatggctctgaatctttccggatt 166  Q
    ||   ||||||||||||||||||||||||||| |||||||||||||||||||    
T  36402743 ggttgttgtaaccgtccaaacccacattaatgactctgaatctttccggatt 36402692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 16 - 166
Target Start/End: Original strand, 39586576 - 39586726
Alignment:
Q  16 ataggtgaactgaagaatgaaggtatttgttgaagttggaagcttatttatagtctaaaacaagccttaagtcattaatacagtcaacgaaaacaagtta 115  Q
    ||||||||| ||||||||||| ||||||||||||  ||||||| |||||||||  ||||||||  | || ||||||||||||||||| |||| |  ||||    
T  39586576 ataggtgaattgaagaatgaaagtatttgttgaaaatggaagcctatttatagcttaaaacaaatcctaggtcattaatacagtcaatgaaaccgtgtta 39586675  T
Q  116 gtggttgtaaccgtccaaacccacattaatggctctgaatctttccggatt 166  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  39586676 gtggttgtaaccatccaaacccacattaatggctctgaatctttccggatt 39586726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 18 - 151
Target Start/End: Original strand, 6936472 - 6936605
Alignment:
Q  18 aggtgaactgaagaatgaaggtatttgttgaagttggaagcttatttatagtctaaaacaagccttaagtcattaatacagtcaacgaaaacaagttagt 117  Q
    ||||||| ||||||||||| ||||||||||||| ||||||| ||||||||| |||||||||| | |||||||||||||||||||| ||||||  ||||||    
T  6936472 aggtgaagtgaagaatgaatgtatttgttgaagatggaagcctatttatagcctaaaacaagtcctaagtcattaatacagtcaatgaaaacgtgttagt 6936571  T
Q  118 ggttgtaaccgtccaaacccacattaatggctct 151  Q
    ||||||||||| ||||||||| ||||||||||||    
T  6936572 ggttgtaaccgcccaaacccatattaatggctct 6936605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 18 - 154
Target Start/End: Original strand, 227634 - 227770
Alignment:
Q  18 aggtgaactgaagaatgaaggtatttgttgaagttggaagcttatttatagtctaaaacaagccttaagtcattaatacagtcaacgaaaacaagttagt 117  Q
    ||||||| ||||||||||||||||||||| ||| ||||||  ||||||||| |||||||||| | || ||||||||||||||||| ||||||  ||||||    
T  227634 aggtgaagtgaagaatgaaggtatttgttaaagatggaagtctatttatagcctaaaacaagtcctaggtcattaatacagtcaatgaaaacgtgttagt 227733  T
Q  118 ggttgtaaccgtccaaacccacattaatggctctgaa 154  Q
    |||||||||||||||||||||||| ||||||||||||    
T  227734 ggttgtaaccgtccaaacccacatcaatggctctgaa 227770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 18 - 162
Target Start/End: Original strand, 40937222 - 40937366
Alignment:
Q  18 aggtgaactgaagaatgaaggtatttgttgaagttggaagcttatttatagtctaaaacaagccttaagtcattaatacagtcaacgaaaacaagttagt 117  Q
    ||||||| |||| |||||| ||||||||||||| ||||||| ||||||||| |||||||||  | || ||||||||||||||||| ||||||  ||||||    
T  40937222 aggtgaagtgaaaaatgaaagtatttgttgaagatggaagcctatttatagcctaaaacaaatcctaggtcattaatacagtcaatgaaaacgtgttagt 40937321  T
Q  118 ggttgtaaccgtccaaacccacattaatggctctgaatctttccg 162  Q
    ||||||||||||||||||||||||||| | |||||||||||||||    
T  40937322 ggttgtaaccgtccaaacccacattaaagactctgaatctttccg 40937366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 18 - 151
Target Start/End: Complemental strand, 41193850 - 41193717
Alignment:
Q  18 aggtgaactgaagaatgaaggtatttgttgaagttggaagcttatttatagtctaaaacaagccttaagtcattaatacagtcaacgaaaacaagttagt 117  Q
    ||||||| || |||||||||||||||||||||| ||||||| ||||||||| |||||||||| | || ||||||| ||||||||| ||||||  ||||||    
T  41193850 aggtgaagtggagaatgaaggtatttgttgaagatggaagcatatttatagcctaaaacaagtcctaggtcattactacagtcaatgaaaacgtgttagt 41193751  T
Q  118 ggttgtaaccgtccaaacccacattaatggctct 151  Q
    |||||||||||||||||||||||||||| |||||    
T  41193750 ggttgtaaccgtccaaacccacattaatagctct 41193717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 26 - 151
Target Start/End: Original strand, 39353310 - 39353435
Alignment:
Q  26 tgaagaatgaaggtatttgttgaagttggaagcttatttatagtctaaaacaagccttaagtcattaatacagtcaacgaaaacaagttagtggttgtaa 125  Q
    ||||||||||| |||| |||||||| ||||||| ||||||||| |||||||||  | || ||||||||||||||||| ||||||  ||||||||||||||    
T  39353310 tgaagaatgaatgtatctgttgaagatggaagcctatttatagcctaaaacaaatcctaggtcattaatacagtcaatgaaaacgtgttagtggttgtaa 39353409  T
Q  126 ccgtccaaacccacattaatggctct 151  Q
    ||||||||||||||||||||| ||||    
T  39353410 ccgtccaaacccacattaatgactct 39353435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 20 - 151
Target Start/End: Complemental strand, 49166240 - 49166110
Alignment:
Q  20 gtgaactgaagaatgaaggtatttgttgaagttggaagcttatttatagtctaaaacaagccttaagtcattaatacagtcaacgaaaacaagttagtgg 119  Q
    ||||| |||||||||||||||||||| |||| ||||||| ||||||||| |||||||||| | ||  |||||| ||||||||| ||||||| ||||||||    
T  49166240 gtgaagtgaagaatgaaggtatttgt-gaagatggaagcctatttatagcctaaaacaagtcctagatcattactacagtcaatgaaaacatgttagtgg 49166142  T
Q  120 ttgtaaccgtccaaacccacattaatggctct 151  Q
    |||||||||||| |||| ||||||||| ||||    
T  49166141 ttgtaaccgtcctaacctacattaatgactct 49166110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 18 - 146
Target Start/End: Complemental strand, 31765335 - 31765207
Alignment:
Q  18 aggtgaactgaagaatgaaggtatttgttgaagttggaagcttatttatagtctaaaacaagccttaagtcattaatacagtcaacgaaaacaagttagt 117  Q
    ||||||| ||||||||||||||||||||||||| ||||||| ||||||||  |||||||||| | || ||||||| | |||||||  |||||  ||||||    
T  31765335 aggtgaagtgaagaatgaaggtatttgttgaagatggaagcctatttataacctaaaacaagtcctaggtcattagtgcagtcaataaaaacgtgttagt 31765236  T
Q  118 ggttgtaaccgtccaaacccacattaatg 146  Q
    |||||||||||| |||||| |||||||||    
T  31765235 ggttgtaaccgttcaaacctacattaatg 31765207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 20 - 109
Target Start/End: Original strand, 41174816 - 41174905
Alignment:
Q  20 gtgaactgaagaatgaaggtatttgttgaagttggaagcttatttatagtctaaaacaagccttaagtcattaatacagtcaacgaaaac 109  Q
    ||||| ||||||||||||||||||||||||| ||||||| ||||||||| |||||||||| | || ||||||||||||||||| ||||||    
T  41174816 gtgaagtgaagaatgaaggtatttgttgaagatggaagcctatttatagcctaaaacaagtcctatgtcattaatacagtcaatgaaaac 41174905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 181 - 291
Target Start/End: Original strand, 32530017 - 32530128
Alignment:
Q  181 ttccctcgttcacaattatcactttaatccgtaaaacaaaggtacatttcggattttattttccg-gaatgcatcagtcatgaccggtggtctgcaccac 279  Q
    ||||||||||||| |||||| | |||||||| |||||| | || ||||||||||||||| |||||  |||||||||| |||| ||| |||||||||||||    
T  32530017 ttccctcgttcaccattatcgcattaatccggaaaacacatgtgcatttcggattttatattccgaaaatgcatcagacatggccgatggtctgcaccac 32530116  T
Q  280 acgtttttgtcg 291  Q
    ||||||||||||    
T  32530117 acgtttttgtcg 32530128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 213 - 294
Target Start/End: Complemental strand, 31765078 - 31764995
Alignment:
Q  213 aaaacaaaggtacatttcggattttattttccggaatgcatca--gtcatgaccggtggtctgcaccacacgtttttgtcggtg 294  Q
    |||||||||||||||| |||||| ||||||||||| |||||||  |||||| |||||||||||||||||| |||||||||||||    
T  31765078 aaaacaaaggtacattccggattgtattttccggactgcatcagtgtcatggccggtggtctgcaccacaagtttttgtcggtg 31764995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 227 - 298
Target Start/End: Original strand, 149586 - 149657
Alignment:
Q  227 tttcggattttattttccggaatgcatcagtcatgaccggtggtctgcaccacacgtttttgtcggtggtca 298  Q
    ||||||||||||| |||| |||||||||||||||| |||||||||||||||| |||||||| ||||||||||    
T  149586 tttcggattttatgttccagaatgcatcagtcatggccggtggtctgcaccatacgtttttttcggtggtca 149657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 231 - 298
Target Start/End: Original strand, 41182164 - 41182231
Alignment:
Q  231 ggattttattttccggaatgcatcagtcatgaccggtggtctgcaccacacgtttttgtcggtggtca 298  Q
    ||||| ||| ||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||    
T  41182164 ggattatatattccggaatgcatcagtcatggccggtggtctgcaccacacgtttttttcggtggtca 41182231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 242 - 298
Target Start/End: Complemental strand, 41193610 - 41193554
Alignment:
Q  242 tccggaatgcatcagtcatgaccggtggtctgcaccacacgtttttgtcggtggtca 298  Q
    ||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||    
T  41193610 tccggaatgcatcagtcataaccggtagtctgcaccacacgtttttgtcggtggtca 41193554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 242 - 298
Target Start/End: Complemental strand, 47013626 - 47013570
Alignment:
Q  242 tccggaatgcatcagtcatgaccggtggtctgcaccacacgtttttgtcggtggtca 298  Q
    |||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||    
T  47013626 tccggaatgcatcagtcatggccggtggtctgcaccacacgtttttttcggtggtca 47013570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 241 - 298
Target Start/End: Complemental strand, 26502053 - 26501996
Alignment:
Q  241 ttccggaatgcatcagtcatgaccggtggtctgcaccacacgtttttgtcggtggtca 298  Q
    ||||||||||||||| ||||| |||||||||||||||||||||||||||| |||||||    
T  26502053 ttccggaatgcatcaatcatggccggtggtctgcaccacacgtttttgtcagtggtca 26501996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 230 - 298
Target Start/End: Original strand, 47647182 - 47647250
Alignment:
Q  230 cggattttattttccggaatgcatcagtcatgaccggtggtctgcaccacacgtttttgtcggtggtca 298  Q
    |||||| ||| || |||||||||||||| ||| ||||||||||||| ||||||||||||||||||||||    
T  47647182 cggattatatatttcggaatgcatcagttatggccggtggtctgcatcacacgtttttgtcggtggtca 47647250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 245 - 292
Target Start/End: Original strand, 53814919 - 53814966
Alignment:
Q  245 ggaatgcatcagtcatgaccggtggtctgcaccacacgtttttgtcgg 292  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||    
T  53814919 ggaatgcatcagtcatggccggtggtctgcaccacacgtttttgtcgg 53814966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 230 - 296
Target Start/End: Complemental strand, 10509093 - 10509027
Alignment:
Q  230 cggattttattttccggaatgcatcagtcatgaccggtggtctgcaccacacgtttttgtcggtggt 296  Q
    |||||| ||| ||| ||||||||||| ||||| ||||||||||||||||||||||||||| ||||||    
T  10509093 cggattatatattctggaatgcatcattcatgtccggtggtctgcaccacacgtttttgttggtggt 10509027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 208 - 298
Target Start/End: Original strand, 39586811 - 39586900
Alignment:
Q  208 tccgtaaaacaaaggtacatttcggattttattttccggaatgcatcagtcatgaccggtggtctgcaccacacgtttttgtcggtggtca 298  Q
    |||| |||||| | || |||| ||||||||| || | ||||||||||||||||| |||||| ||||||||||||||||||||| |||||||    
T  39586811 tccgaaaaacagatgtgcattccggattttaatt-ctggaatgcatcagtcatggccggtgatctgcaccacacgtttttgtcagtggtca 39586900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 119 - 164
Target Start/End: Original strand, 41182006 - 41182051
Alignment:
Q  119 gttgtaaccgtccaaacccacattaatggctctgaatctttccgga 164  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||    
T  41182006 gttgtaaccatccaaacccacattaatggctctgaatctttccgga 41182051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 240 - 292
Target Start/End: Original strand, 6936743 - 6936795
Alignment:
Q  240 tttccggaatgcatcagtcatgaccggtggtctgcaccacacgtttttgtcgg 292  Q
    ||||||||||||||||||||||  |||||||||||||||||| ||||||||||    
T  6936743 tttccggaatgcatcagtcatggtcggtggtctgcaccacacttttttgtcgg 6936795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 18 - 79
Target Start/End: Original strand, 33843521 - 33843582
Alignment:
Q  18 aggtgaactgaagaatgaaggtatttgttgaagttggaagcttatttatagtctaaaacaag 79  Q
    ||||||| ||||||||||||| ||||||||||| ||||| | ||||||||| ||||||||||    
T  33843521 aggtgaagtgaagaatgaaggaatttgttgaagatggaaacctatttatagcctaaaacaag 33843582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 18 - 79
Target Start/End: Original strand, 42899222 - 42899283
Alignment:
Q  18 aggtgaactgaagaatgaaggtatttgttgaagttggaagcttatttatagtctaaaacaag 79  Q
    ||||||| ||||||||||||| ||||||||||  || |||| ||||||||| ||||||||||    
T  42899222 aggtgaagtgaagaatgaaggaatttgttgaaaatgcaagcctatttatagcctaaaacaag 42899283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 233 - 298
Target Start/End: Complemental strand, 49165964 - 49165900
Alignment:
Q  233 attttattttccggaatgcatcagtcatgaccggtggtctgcaccacacgtttttgtcggtggtca 298  Q
    ||||||| ||||||| ||||| |||| |  ||| ||||||||||||||||||||||||||||||||    
T  49165964 attttatattccggagtgcat-agtcttagccgatggtctgcaccacacgtttttgtcggtggtca 49165900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 18 - 79
Target Start/End: Complemental strand, 51329061 - 51329000
Alignment:
Q  18 aggtgaactgaagaatgaaggtatttgttgaagttggaagcttatttatagtctaaaacaag 79  Q
    ||||||| ||||||||||||| ||||||||||  || |||| ||||||||| ||||||||||    
T  51329061 aggtgaagtgaagaatgaaggaatttgttgaacatgcaagcctatttatagcctaaaacaag 51329000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 208 - 268
Target Start/End: Complemental strand, 36402607 - 36402547
Alignment:
Q  208 tccgtaaaacaaaggtacatttcggattttattttccggaatgcatcagtcatgaccggtg 268  Q
    |||| |||||| | || |||| |||||||||| ||||||||||||||||||||| ||||||    
T  36402607 tccggaaaacagatgtgcattccggattttatattccggaatgcatcagtcatggccggtg 36402547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 26 - 84
Target Start/End: Original strand, 53393958 - 53394016
Alignment:
Q  26 tgaagaatgaaggtatttgttgaagttggaagcttatttatagtctaaaacaagcctta 84  Q
    ||||||||||||| ||||||||||  || |||| ||||||||| |||||||||| ||||    
T  53393958 tgaagaatgaaggaatttgttgaacatgcaagcctatttatagcctaaaacaagtctta 53394016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 19 - 79
Target Start/End: Complemental strand, 25214666 - 25214606
Alignment:
Q  19 ggtgaactgaagaatgaaggtatttgttgaagttggaagcttatttatagtctaaaacaag 79  Q
    |||||| ||||||||||||| ||||||| ||| || |||  ||||||||| ||||||||||    
T  25214666 ggtgaattgaagaatgaaggaatttgttaaagatgtaagtctatttatagcctaaaacaag 25214606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 97; Significance: 1e-47; HSPs: 35)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 26 - 166
Target Start/End: Original strand, 44760105 - 44760245
Alignment:
Q  26 tgaagaatgaaggtatttgttgaagttggaagcttatttatagtctaaaacaagccttaagtcattaatacagtcaacgaaaacaagttagtggttgtaa 125  Q
    |||| ||||||||||| | |||||| ||||||||||||||||| |||||||||| | || ||||||||||||||||| ||||||  ||||||||||||||    
T  44760105 tgaataatgaaggtatatcttgaagatggaagcttatttatagcctaaaacaagtcctaggtcattaatacagtcaatgaaaacgtgttagtggttgtaa 44760204  T
Q  126 ccgtccaaacccacattaatggctctgaatctttccggatt 166  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  44760205 ccgtccaaacccacattaatggctctgaatctttccggatt 44760245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 26 - 166
Target Start/End: Original strand, 6404128 - 6404268
Alignment:
Q  26 tgaagaatgaaggtatttgttgaagttggaagcttatttatagtctaaaacaagccttaagtcattaatacagtcaacgaaaacaagttagtggttgtaa 125  Q
    ||||||||||||||||||||||||| ||||||| ||||||||| |||||||||| | || ||||||||||| ||||||||||||  ||||||||||||||    
T  6404128 tgaagaatgaaggtatttgttgaagatggaagcctatttatagcctaaaacaagtcctaggtcattaatacggtcaacgaaaacgtgttagtggttgtaa 6404227  T
Q  126 ccgtccaaacccacattaatggctctgaatctttccggatt 166  Q
    |||||||||||| ||||||||||||| ||||||||| ||||    
T  6404228 ccgtccaaacccgcattaatggctctaaatctttcccgatt 6404268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 18 - 166
Target Start/End: Original strand, 15911780 - 15911931
Alignment:
Q  18 aggtgaactgaagaatgaaggtatttgttgaagttggaagcttatttatagtctaaaacaagccttaagtcattaatacagtcaacgaaaacaagttagt 117  Q
    ||||||| |||||||| |||||||||||||||| ||||||| ||||||||| |||||||||| | || ||||||||||||||||| |||||   ||||||    
T  15911780 aggtgaagtgaagaatcaaggtatttgttgaagatggaagcctatttatagcctaaaacaagtcctaggtcattaatacagtcaatgaaaatgtgttagt 15911879  T
Q  118 g---gttgtaaccgtccaaacccacattaatggctctgaatctttccggatt 166  Q
    |   ||||||||||||||||||||||||||||||||||||||||||||||||    
T  15911880 ggttgttgtaaccgtccaaacccacattaatggctctgaatctttccggatt 15911931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 18 - 151
Target Start/End: Original strand, 13278698 - 13278831
Alignment:
Q  18 aggtgaactgaagaatgaaggtatttgttgaagttggaagcttatttatagtctaaaacaagccttaagtcattaatacagtcaacgaaaacaagttagt 117  Q
    ||||||| ||||||||||||||||||||||||| ||||||| ||||||||| |||||||||| | |  ||||||||||||||||| ||||||  ||||||    
T  13278698 aggtgaagtgaagaatgaaggtatttgttgaagatggaagcctatttatagcctaaaacaagtcctttgtcattaatacagtcaatgaaaacgtgttagt 13278797  T
Q  118 ggttgtaaccgtccaaacccacattaatggctct 151  Q
    |||||||||||||||| |||||||||||||||||    
T  13278798 ggttgtaaccgtccaaccccacattaatggctct 13278831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 18 - 166
Target Start/End: Original strand, 17308962 - 17309112
Alignment:
Q  18 aggtgaactgaagaatgaaggtatttgttgaagttggaagcttatttatagtctaaaacaagccttaagtcattaatacagtcaacgaaaacaagttagt 117  Q
    ||||||| |||||||||||||||||||| |||| ||||||| ||||||||| | |||||||| | || ||||||||||||||||| ||||||  ||||||    
T  17308962 aggtgaagtgaagaatgaaggtatttgt-gaagatggaagcctatttatagccgaaaacaagtcataggtcattaatacagtcaatgaaaacgtgttagt 17309060  T
Q  118 ggttg---taaccgtccaaacccacattaatggctctgaatctttccggatt 166  Q
    |||||   ||||||||||||||||||||||||||||||||||||||||||||    
T  17309061 ggttgttgtaaccgtccaaacccacattaatggctctgaatctttccggatt 17309112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 26 - 166
Target Start/End: Complemental strand, 30490805 - 30490662
Alignment:
Q  26 tgaagaatgaaggtatttgttgaagttggaagcttatttatagtctaaaacaagccttaagtcattaatacagtcaacgaaaacaagttagtgg---ttg 122  Q
    ||||||||| ||||||||||||||| || |||| ||||||| | |||||||||| | || ||||||||||||||||| ||||||  ||||||||   |||    
T  30490805 tgaagaatgtaggtatttgttgaagatgaaagcctatttatggcctaaaacaagtcctaggtcattaatacagtcaatgaaaacgtgttagtggttgttg 30490706  T
Q  123 taaccgtccaaacccacattaatggctctgaatctttccggatt 166  Q
    |||||||||||||||||||||||||||||||||||||| |||||    
T  30490705 taaccgtccaaacccacattaatggctctgaatctttctggatt 30490662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 18 - 166
Target Start/End: Complemental strand, 38703719 - 38703569
Alignment:
Q  18 aggtgaactgaagaatgaaggtatttgttgaagttggaagcttatttatagtctaaaacaagccttaagtcattaatacagtcaacgaaaacaagttagt 117  Q
    ||||||| |||||||| |||||||||||||||| |||||||  |||||||| |||||| ||| | || ||||||||||||||||| ||||||  ||||||    
T  38703719 aggtgaagtgaagaataaaggtatttgttgaagatggaagcc-atttatagcctaaaagaagtcctaggtcattaatacagtcaatgaaaacgtgttagt 38703621  T
Q  118 ggttgt---aaccgtccaaacccacattaatggctctgaatctttccggatt 166  Q
    ||||||   ||||||||||||||||||||||| |||||||||||||||||||    
T  38703620 ggttgttgtaaccgtccaaacccacattaatgactctgaatctttccggatt 38703569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 18 - 164
Target Start/End: Complemental strand, 17137842 - 17137689
Alignment:
Q  18 aggtgaactgaagaatgaaggtatttgttgaagttggaagc----ttatttatagtctaaaacaagccttaagtcattaatacagtcaacgaaaacaagt 113  Q
    ||||||| ||||||||||||||||||||||||| | |||||    |||||||||| |||||||||| | || ||||||||||||||||| ||||||  ||    
T  17137842 aggtgaagtgaagaatgaaggtatttgttgaagatagaagcctgtttatttatagcctaaaacaagtcctaggtcattaatacagtcaatgaaaacgtgt 17137743  T
Q  114 tagtggttgt---aaccgtccaaacccacattaatggctctgaatctttccgga 164  Q
    ||||||||||   |||||||||||||||||||||||||||| ||| ||||||||    
T  17137742 tagtggttgttgtaaccgtccaaacccacattaatggctctaaatgtttccgga 17137689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 18 - 166
Target Start/End: Original strand, 45117075 - 45117230
Alignment:
Q  18 aggtgaactgaagaatgaaggtatttgttgaagttggaagct-------tatttatagtctaaaacaagccttaagtcattaatacagtcaacgaaaaca 110  Q
    ||||||| ||||||||||| ||||||||||||| |||||| |       ||||||||| |||||||||| |||| |||||||||| |||||| ||||||     
T  45117075 aggtgaagtgaagaatgaaagtatttgttgaagatggaagatggaagcctatttatagcctaaaacaagtcttaggtcattaatagagtcaatgaaaacg 45117174  T
Q  111 agttagtggttgtaaccgtccaaacccacattaatggctctgaatctttccggatt 166  Q
     ||||||||||||||||||||||| ||||||||| ||||||||||||||| |||||    
T  45117175 tgttagtggttgtaaccgtccaaatccacattaacggctctgaatctttctggatt 45117230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 18 - 151
Target Start/End: Complemental strand, 7942875 - 7942742
Alignment:
Q  18 aggtgaactgaagaatgaaggtatttgttgaagttggaagcttatttatagtctaaaacaagccttaagtcattaatacagtcaacgaaaacaagttagt 117  Q
    ||||||| |||| |||||||||||||||||||| ||||||  | |||||||  ||||||||| | || ||| ||| ||||||||| ||||||| ||||||    
T  7942875 aggtgaagtgaacaatgaaggtatttgttgaagatggaagtctgtttatagcataaaacaagtcctaggtccttactacagtcaatgaaaacatgttagt 7942776  T
Q  118 ggttgtaaccgtccaaacccacattaatggctct 151  Q
    ||||||||||||||||||| ||||||||||||||    
T  7942775 ggttgtaaccgtccaaacctacattaatggctct 7942742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 18 - 151
Target Start/End: Complemental strand, 31994210 - 31994077
Alignment:
Q  18 aggtgaactgaagaatgaaggtatttgttgaagttggaagcttatttatagtctaaaacaagccttaagtcattaatacagtcaacgaaaacaagttagt 117  Q
    ||||||| ||| |||||||| |||||||||||  ||||| | ||||||||| |||||||||| | || ||||||| ||||||||| ||||||  ||||||    
T  31994210 aggtgaagtgatgaatgaagatatttgttgaatatggaaacctatttatagcctaaaacaagtcctaggtcattactacagtcaatgaaaacgtgttagt 31994111  T
Q  118 ggttgtaaccgtccaaacccacattaatggctct 151  Q
    ||||||||||||||||||| ||||||||||||||    
T  31994110 ggttgtaaccgtccaaacctacattaatggctct 31994077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 20 - 151
Target Start/End: Complemental strand, 1210062 - 1209930
Alignment:
Q  20 gtgaactgaagaatgaaggtatttgttgaagttggaagcttatttatagtctaaaacaagccttaagtcattaatacagtcaacgaaaacaagttagtgg 119  Q
    ||||| ||||||||| |||||||||| |||| ||||||| |||||||||  ||||||||| | || |||||||||| |||||| ||||||  ||||||||    
T  1210062 gtgaagtgaagaatgcaggtatttgtcgaagatggaagcctatttatagcttaaaacaagtcctaggtcattaataaagtcaatgaaaacgtgttagtgg 1209963  T
Q  120 ttgtaaccgtccaaacccaca-ttaatggctct 151  Q
    ||||||||||||||||||||| |||||||||||    
T  1209962 ttgtaaccgtccaaacccacatttaatggctct 1209930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 225 - 298
Target Start/End: Complemental strand, 17137583 - 17137510
Alignment:
Q  225 catttcggattttattttccggaatgcatcagtcatgaccggtggtctgcaccacacgtttttgtcggtggtca 298  Q
    ||||||||||||||| |||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  17137583 catttcggattttatattccagaatgcatcagtcatggccggtggtctgcaccacacgtttttgtcggtggtca 17137510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 208 - 298
Target Start/End: Original strand, 13278952 - 13279042
Alignment:
Q  208 tccgtaaaacaaaggtacatttcggattttattttccggaatgcatcagtcatgaccggtggtctgcaccacacgtttttgtcggtggtca 298  Q
    |||| |||||| | || |||| |||||||||| ||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||    
T  13278952 tccggaaaacacatgtgcattccggattttatattccggaatgcatcagtcaaggccggtggtctgcaccacacgtttttgtcggtggtca 13279042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 21 - 147
Target Start/End: Original strand, 18137596 - 18137722
Alignment:
Q  21 tgaactgaagaatgaaggtatttgttgaagttggaagcttatttatagtctaaaacaagccttaagtcattaatacagtcaacgaaaacaagttagtggt 120  Q
    |||| ||||||||||||||||||||||||| |  |||| ||||||||| |||||| ||| | || ||||||| |||| |||| ||||||  |||||||||    
T  18137596 tgaagtgaagaatgaaggtatttgttgaagataaaagcctatttatagcctaaaataagtcctaggtcattagtacaatcaatgaaaacgtgttagtggt 18137695  T
Q  121 tgtaaccgtccaaacccacattaatgg 147  Q
    ||||||||||| |||| ||||||||||    
T  18137696 tgtaaccgtcccaacctacattaatgg 18137722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 230 - 298
Target Start/End: Original strand, 17309222 - 17309290
Alignment:
Q  230 cggattttattttccggaatgcatcagtcatgaccggtggtctgcaccacacgtttttgtcggtggtca 298  Q
    |||||| ||| ||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||    
T  17309222 cggattatatattccggaatgcatcagtcatggccggtggtctgcaccacatgtttttgtcggtggtca 17309290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 213 - 296
Target Start/End: Original strand, 1115362 - 1115447
Alignment:
Q  213 aaaacaaaggtacatttcggattttattttccggaatgcatca--gtcatgaccggtggtctgcaccacacgtttttgtcggtggt 296  Q
    ||||||||||| |||| | ||||||||||||||||||||||||  |||||| |||||||| ||||||||| |||||||||||||||    
T  1115362 aaaacaaaggtgcattccagattttattttccggaatgcatcagtgtcatggccggtggtttgcaccacatgtttttgtcggtggt 1115447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 208 - 298
Target Start/End: Original strand, 38208572 - 38208662
Alignment:
Q  208 tccgtaaaacaaaggtacatttcggattttattttccggaatgcatcagtcatgaccggtggtctgcaccacacgtttttgtcggtggtca 298  Q
    |||| |||||| | || |||| |||||||||| || |||||||||||||||||| ||||||||||||| || |||||||||||||||||||    
T  38208572 tccgaaaaacagatgtgcattccggattttatatttcggaatgcatcagtcatggccggtggtctgcatcatacgtttttgtcggtggtca 38208662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 213 - 298
Target Start/End: Original strand, 45234479 - 45234564
Alignment:
Q  213 aaaacaaaggtacatttcggattttattttccggaatgcatcagtcatgaccggtggtctgcaccacacgtttttgtcggtggtca 298  Q
    |||||||| || | || |||||| ||| ||||||||||||||| ||||| | ||||||||||||||||||||||||||||||||||    
T  45234479 aaaacaaatgtgctttccggattatatattccggaatgcatcaatcatggctggtggtctgcaccacacgtttttgtcggtggtca 45234564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 225 - 293
Target Start/End: Complemental strand, 1209793 - 1209725
Alignment:
Q  225 catttcggattttattttccggaatgcatcagtcatgaccggtggtctgcaccacacgtttttgtcggt 293  Q
    |||| |||||||||| ||||||||||||||||||| | |||||||||||||||||| ||||||||||||    
T  1209793 cattccggattttatattccggaatgcatcagtcaaggccggtggtctgcaccacaagtttttgtcggt 1209725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 232 - 296
Target Start/End: Complemental strand, 38703457 - 38703393
Alignment:
Q  232 gattttattttccggaatgcatcagtcatgaccggtggtctgcaccacacgtttttgtcggtggt 296  Q
    |||| ||| |||||||||||||||||||||  |||||||||||||||||||||||||||||||||    
T  38703457 gattatatattccggaatgcatcagtcatgggcggtggtctgcaccacacgtttttgtcggtggt 38703393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 225 - 291
Target Start/End: Original strand, 6404372 - 6404438
Alignment:
Q  225 catttcggattttattttccggaatgcatcagtcatgaccggtggtctgcaccacacgtttttgtcg 291  Q
    |||| |||||| ||| |||| |||||||||||||||| |||||||||||||||||||||||||||||    
T  6404372 cattccggattgtatattccagaatgcatcagtcatggccggtggtctgcaccacacgtttttgtcg 6404438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 18 - 96
Target Start/End: Original strand, 38207489 - 38207567
Alignment:
Q  18 aggtgaactgaagaatgaaggtatttgttgaagttggaagcttatttatagtctaaaacaagccttaagtcattaatac 96  Q
    ||||||| ||||||||||||||||||||||||| || |||| ||||||||| |||||||||| | || |||||||||||    
T  38207489 aggtgaagtgaagaatgaaggtatttgttgaagatgtaagcatatttatagcctaaaacaagtcctaggtcattaatac 38207567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 216 - 298
Target Start/End: Complemental strand, 31993948 - 31993864
Alignment:
Q  216 acaaaggtacatttcggattttattttccggaatgcatcagt--catgaccggtggtctgcaccacacgtttttgtcggtggtca 298  Q
    ||||||||||||| |||||||||||||||||||| |||||||  |||| |||||||  ||||||||| |||||||||| ||||||    
T  31993948 acaaaggtacattccggattttattttccggaatacatcagtggcatggccggtggcttgcaccacatgtttttgtcgatggtca 31993864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 244 - 296
Target Start/End: Complemental strand, 30490539 - 30490487
Alignment:
Q  244 cggaatgcatcagtcatgaccggtggtctgcaccacacgtttttgtcggtggt 296  Q
    |||||||||||||||||| ||||||||| ||||||||||||||||||||||||    
T  30490539 cggaatgcatcagtcatggccggtggtccgcaccacacgtttttgtcggtggt 30490487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 92 - 166
Target Start/End: Original strand, 38208410 - 38208487
Alignment:
Q  92 aatacagtcaacgaaaacaagttagtggttgt---aaccgtccaaacccacattaatggctctgaatctttccggatt 166  Q
    ||||| ||||| ||||||  ||||||||||||   |||||||||||||||||||||||||||||||||||||| ||||    
T  38208410 aatacggtcaatgaaaacgtgttagtggttgttgcaaccgtccaaacccacattaatggctctgaatctttccagatt 38208487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 242 - 298
Target Start/End: Original strand, 44760319 - 44760375
Alignment:
Q  242 tccggaatgcatcagtcatgaccggtggtctgcaccacacgtttttgtcggtggtca 298  Q
    |||| |||||||| |||||  ||||||||||||||||||||||||||||||||||||    
T  44760319 tccgaaatgcatctgtcatagccggtggtctgcaccacacgtttttgtcggtggtca 44760375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 28 - 109
Target Start/End: Original strand, 1114722 - 1114803
Alignment:
Q  28 aagaatgaaggtatttgttgaagttggaagcttatttatagtctaaaacaagccttaagtcattaatacagtcaacgaaaac 109  Q
    ||||||||||||||||||||||| || |||| |||||||||  ||||||||| | || ||||||| || |||||| ||||||    
T  1114722 aagaatgaaggtatttgttgaagatgaaagcctatttatagcttaaaacaagtcctaggtcattagtatagtcaatgaaaac 1114803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 216 - 257
Target Start/End: Complemental strand, 7942614 - 7942573
Alignment:
Q  216 acaaaggtacatttcggattttattttccggaatgcatcagt 257  Q
    ||||||||||||| ||||||||||||||||||||||||||||    
T  7942614 acaaaggtacattccggattttattttccggaatgcatcagt 7942573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 256 - 298
Target Start/End: Original strand, 15911998 - 15912040
Alignment:
Q  256 gtcatgaccggtggtctgcaccacacgtttttgtcggtggtca 298  Q
    |||||| |||||| |||||||||||||||||||||||||||||    
T  15911998 gtcatggccggtgctctgcaccacacgtttttgtcggtggtca 15912040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 18 - 79
Target Start/End: Complemental strand, 21485391 - 21485330
Alignment:
Q  18 aggtgaactgaagaatgaaggtatttgttgaagttggaagcttatttatagtctaaaacaag 79  Q
    ||||||| ||||||||||| | ||||||||||  || |||||||||||||| ||||||||||    
T  21485391 aggtgaagtgaagaatgaaagaatttgttgaatatgaaagcttatttatagcctaaaacaag 21485330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 230 - 287
Target Start/End: Original strand, 45117337 - 45117394
Alignment:
Q  230 cggattttattttccggaatgcatcagtcatgaccggtggtctgcaccacacgttttt 287  Q
    |||| ||||| ||| | ||||||||||| ||| |||||||||||||||||||||||||    
T  45117337 cggagtttatattctgaaatgcatcagttatggccggtggtctgcaccacacgttttt 45117394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 16 - 79
Target Start/End: Complemental strand, 37128027 - 37127964
Alignment:
Q  16 ataggtgaactgaagaatgaaggtatttgttgaagttggaagcttatttatagtctaaaacaag 79  Q
    ||||||||| ||||||||||| | ||||||| ||  || |||||||||||||| ||||||||||    
T  37128027 ataggtgaagtgaagaatgaaagaatttgttaaaaatgcaagcttatttatagcctaaaacaag 37127964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 119 - 151
Target Start/End: Original strand, 1115204 - 1115236
Alignment:
Q  119 gttgtaaccgtccaaacccacattaatggctct 151  Q
    |||||||||||||||||| ||||||||||||||    
T  1115204 gttgtaaccgtccaaacctacattaatggctct 1115236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 19 - 79
Target Start/End: Original strand, 33945933 - 33945993
Alignment:
Q  19 ggtgaactgaagaatgaaggtatttgttgaagttggaagcttatttatagtctaaaacaag 79  Q
    |||||| ||||||||||||| ||||||||||| || || | ||| ||||| ||||||||||    
T  33945933 ggtgaagtgaagaatgaaggaatttgttgaagatgcaaacctatatatagcctaaaacaag 33945993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 97; Significance: 1e-47; HSPs: 47)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 18 - 166
Target Start/End: Original strand, 37952305 - 37952453
Alignment:
Q  18 aggtgaactgaagaatgaaggtatttgttgaagttggaagcttatttatagtctaaaacaagccttaagtcattaatacagtcaacgaaaacaagttagt 117  Q
    ||||||| ||||||||||||||||||||||||| ||||||| | ||||||| |||||||||| | || ||||||||||||||||| ||||||  ||||||    
T  37952305 aggtgaagtgaagaatgaaggtatttgttgaagatggaagcctttttatagcctaaaacaagtcctaggtcattaatacagtcaatgaaaacgtgttagt 37952404  T
Q  118 ggttgtaaccgtccaaacccacattaatggctctgaatctttccggatt 166  Q
    ||||||||| ||||||||||||||||||| |||||||||||||||||||    
T  37952405 ggttgtaacggtccaaacccacattaatgactctgaatctttccggatt 37952453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 20 - 162
Target Start/End: Original strand, 29961404 - 29961546
Alignment:
Q  20 gtgaactgaagaatgaaggtatttgttgaagttggaagcttatttatagtctaaaacaagccttaagtcattaatacagtcaacgaaaacaagttagtgg 119  Q
    ||||| ||||||||||||||||||||||||| ||||||  ||||||||| |||||| ||| ||||||||||||||||| |||| ||||||  ||||||||    
T  29961404 gtgaagtgaagaatgaaggtatttgttgaagatggaagtctatttatagcctaaaataagtcttaagtcattaatacaatcaatgaaaacgtgttagtgg 29961503  T
Q  120 ttgtaaccgtccaaacccacattaatggctctgaatctttccg 162  Q
    |||||||||| ||||||||||||||||||||||||||||||||    
T  29961504 ttgtaaccgttcaaacccacattaatggctctgaatctttccg 29961546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 16 - 166
Target Start/End: Original strand, 44496488 - 44496638
Alignment:
Q  16 ataggtgaactgaagaatgaaggtatttgttgaagttggaagcttatttatagtctaaaacaagccttaagtcattaatacagtcaacgaaaacaagtta 115  Q
    ||||||| | ||||||||||| ||||||||||||| || |||| ||||||||| |||||||||| | || ||||||||||||||||| ||||||  ||||    
T  44496488 ataggtggagtgaagaatgaaagtatttgttgaagatgaaagcctatttatagcctaaaacaagtcctatgtcattaatacagtcaatgaaaacgtgtta 44496587  T
Q  116 gtggttgtaaccgtccaaacccacattaatggctctgaatctttccggatt 166  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  44496588 gtggttgtaaccgtccaaacccacattaatggctttgaatctttccggatt 44496638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 20 - 151
Target Start/End: Original strand, 41086406 - 41086537
Alignment:
Q  20 gtgaactgaagaatgaaggtatttgttgaagttggaagcttatttatagtctaaaacaagccttaagtcattaatacagtcaacgaaaacaagttagtgg 119  Q
    ||||| ||||||||||||||||||||||||| ||||||| |||||||||||||||||||| | || ||||||||||||||||| ||||||  ||||||||    
T  41086406 gtgaagtgaagaatgaaggtatttgttgaagatggaagcctatttatagtctaaaacaagtcctaggtcattaatacagtcaatgaaaacgtgttagtgg 41086505  T
Q  120 ttgtaaccgtccaaacccacattaatggctct 151  Q
    |||||||| |||||||||||||||||||||||    
T  41086506 ttgtaaccttccaaacccacattaatggctct 41086537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 20 - 151
Target Start/End: Original strand, 41091174 - 41091305
Alignment:
Q  20 gtgaactgaagaatgaaggtatttgttgaagttggaagcttatttatagtctaaaacaagccttaagtcattaatacagtcaacgaaaacaagttagtgg 119  Q
    ||||| ||||||||||||||||||||||||| ||||||| ||||||||| |||||||||| | || ||||||||||||||||| ||||||  ||||||||    
T  41091174 gtgaagtgaagaatgaaggtatttgttgaagatggaagcctatttatagcctaaaacaagtcctaggtcattaatacagtcaatgaaaacgtgttagtgg 41091273  T
Q  120 ttgtaaccgtccaaacccacattaatggctct 151  Q
    ||||||||||||||||||||||||||||||||    
T  41091274 ttgtaaccgtccaaacccacattaatggctct 41091305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 18 - 166
Target Start/End: Complemental strand, 14587476 - 14587322
Alignment:
Q  18 aggtgaactgaagaatgaaggtatttgttgaagttggaagct---tatttatagtctaaaacaagccttaagtcattaatacagtcaacgaaaacaagtt 114  Q
    ||||||| ||||||||||||||||||||||||| |||||||    ||||||||| |||||||||| | |||||||||||||||||||| ||||||  |||    
T  14587476 aggtgaagtgaagaatgaaggtatttgttgaagatggaagccgcctatttatagcctaaaacaagtcctaagtcattaatacagtcaatgaaaacgtgtt 14587377  T
Q  115 agtggttgt---aaccgtccaaacccacattaatggctctgaatctttccggatt 166  Q
    |||||||||   |||||||||||||||||| ||||||||||||||||||||||||    
T  14587376 agtggttgttgtaaccgtccaaacccacataaatggctctgaatctttccggatt 14587322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 18 - 151
Target Start/End: Complemental strand, 11952554 - 11952421
Alignment:
Q  18 aggtgaactgaagaatgaaggtatttgttgaagttggaagcttatttatagtctaaaacaagccttaagtcattaatacagtcaacgaaaacaagttagt 117  Q
    ||||||| ||||||||||||||||||||||||| ||||||| ||||||||| |||||| ||| |||  ||||||||||||||||| ||||||  ||||||    
T  11952554 aggtgaagtgaagaatgaaggtatttgttgaagatggaagcctatttatagcctaaaataagtcttttgtcattaatacagtcaatgaaaacgtgttagt 11952455  T
Q  118 ggttgtaaccgtccaaacccacattaatggctct 151  Q
    |||||||||||||||||| |||||||||||||||    
T  11952454 ggttgtaaccgtccaaactcacattaatggctct 11952421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 26 - 163
Target Start/End: Complemental strand, 42882715 - 42882578
Alignment:
Q  26 tgaagaatgaaggtatttgttgaagttggaagcttatttatagtctaaaacaagccttaagtcattaatacagtcaacgaaaacaagttagtggttgtaa 125  Q
    |||||||||||| |||||||||||| ||||||| ||||||||| |||||||||| | || ||||||||||||||||| |||||   ||||||||||||||    
T  42882715 tgaagaatgaagatatttgttgaagatggaagcctatttatagcctaaaacaagtcctaggtcattaatacagtcaatgaaaatgtgttagtggttgtaa 42882616  T
Q  126 ccgtccaaacccacattaatggctctgaatctttccgg 163  Q
    || |||||||||||| ||||||||||||||||||||||    
T  42882615 ccatccaaacccacaataatggctctgaatctttccgg 42882578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 18 - 151
Target Start/End: Complemental strand, 50262125 - 50261992
Alignment:
Q  18 aggtgaactgaagaatgaaggtatttgttgaagttggaagcttatttatagtctaaaacaagccttaagtcattaatacagtcaacgaaaacaagttagt 117  Q
    ||||||| ||||||||||||||||||||||||| ||||||| ||||||||| |||||||||| | || ||||||||||||||||| ||||||  ||||||    
T  50262125 aggtgaagtgaagaatgaaggtatttgttgaagatggaagcctatttatagcctaaaacaagtcctaggtcattaatacagtcaatgaaaacgtgttagt 50262026  T
Q  118 ggttgtaaccgtccaaacccacattaatggctct 151  Q
    |||||||||||| |||||||||||||||| ||||    
T  50262025 ggttgtaaccgttcaaacccacattaatgactct 50261992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 26 - 151
Target Start/End: Complemental strand, 41900413 - 41900288
Alignment:
Q  26 tgaagaatgaaggtatttgttgaagttggaagcttatttatagtctaaaacaagccttaagtcattaatacagtcaacgaaaacaagttagtggttgtaa 125  Q
    |||||||||||||||||| |||||| ||||||| ||||||||| |||||||||| | || ||||||||||||||||| |||||   ||||||||||||||    
T  41900413 tgaagaatgaaggtatttattgaagatggaagcctatttatagcctaaaacaagtcataggtcattaatacagtcaatgaaaatgtgttagtggttgtaa 41900314  T
Q  126 ccgtccaaacccacattaatggctct 151  Q
    ||||||||||||||||||||||||||    
T  41900313 ccgtccaaacccacattaatggctct 41900288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 18 - 151
Target Start/End: Original strand, 49851713 - 49851846
Alignment:
Q  18 aggtgaactgaagaatgaaggtatttgttgaagttggaagcttatttatagtctaaaacaagccttaagtcattaatacagtcaacgaaaacaagttagt 117  Q
    ||||||| ||||||||||||||||||||||||| || |||| ||||||||| |||||||||| | || ||||||| ||||||||| ||||||| ||||||    
T  49851713 aggtgaagtgaagaatgaaggtatttgttgaagatgaaagcctatttatagcctaaaacaagtcctaggtcattagtacagtcaatgaaaacatgttagt 49851812  T
Q  118 ggttgtaaccgtccaaacccacattaatggctct 151  Q
    ||||||||||||||||||| ||||| ||||||||    
T  49851813 ggttgtaaccgtccaaacctacattgatggctct 49851846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 18 - 166
Target Start/End: Original strand, 33801368 - 33801519
Alignment:
Q  18 aggtgaactgaagaatgaaggtatttgttgaagttggaagcttatttatagtctaaaacaagccttaagtcattaatacagtcaacgaaaacaagttagt 117  Q
    ||||||| ||||||||| |||||||| |||||| ||||||| ||||||||| |||||||||| | |||||||||| ||||||||| ||||||  ||||||    
T  33801368 aggtgaagtgaagaatgtaggtattttttgaagatggaagcctatttatagcctaaaacaagtcctaagtcattattacagtcaatgaaaacgtgttagt 33801467  T
Q  118 ggt---tgtaaccgtccaaacccacattaatggctctgaatctttccggatt 166  Q
    |||   ||||| |||||||||||||||||||| |||||||||||||| ||||    
T  33801468 ggttgctgtaatcgtccaaacccacattaatgactctgaatctttccagatt 33801519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 18 - 151
Target Start/End: Original strand, 38860681 - 38860814
Alignment:
Q  18 aggtgaactgaagaatgaaggtatttgttgaagttggaagcttatttatagtctaaaacaagccttaagtcattaatacagtcaacgaaaacaagttagt 117  Q
    ||||||| ||||||||||||||||||||||||| || |||| ||||||||| |||||||||| | ||  ||||||||||| |||| ||||||  ||||||    
T  38860681 aggtgaagtgaagaatgaaggtatttgttgaagatgaaagcctatttatagcctaaaacaagtcatagatcattaatacattcaatgaaaacgtgttagt 38860780  T
Q  118 ggttgtaaccgtccaaacccacattaatggctct 151  Q
    ||| ||||||||||||||||||||||||||||||    
T  38860781 ggtagtaaccgtccaaacccacattaatggctct 38860814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 18 - 149
Target Start/End: Complemental strand, 52632493 - 52632362
Alignment:
Q  18 aggtgaactgaagaatgaaggtatttgttgaagttggaagcttatttatagtctaaaacaagccttaagtcattaatacagtcaacgaaaacaagttagt 117  Q
    ||||||| ||||||||||||  ||||||||||| ||||||| ||||||||| |||||||||| | || |||||||||||| |||| ||||||  ||||||    
T  52632493 aggtgaagtgaagaatgaagacatttgttgaagatggaagcctatttatagcctaaaacaagtcctaggtcattaatacaatcaatgaaaacgtgttagt 52632394  T
Q  118 ggttgtaaccgtccaaacccacattaatggct 149  Q
    ||||||||||||| ||||||||||||||||||    
T  52632393 ggttgtaaccgtctaaacccacattaatggct 52632362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 16 - 151
Target Start/End: Original strand, 12528448 - 12528583
Alignment:
Q  16 ataggtgaactgaagaatgaaggtatttgttgaagttggaagcttatttatagtctaaaacaagccttaagtcattaatacagtcaacgaaaacaagtta 115  Q
    ||||||||| ||||||||||||||||||||||||| ||||||| ||||||||| |||||||||| | || ||||||||||||||||| ||||||  |||     
T  12528448 ataggtgaagtgaagaatgaaggtatttgttgaagatggaagcctatttatagcctaaaacaagtcctaggtcattaatacagtcaatgaaaacgtgttg 12528547  T
Q  116 gtggttgtaaccgtccaaacccacattaatggctct 151  Q
    ||||||||||||||| |||  || ||||||| ||||    
T  12528548 gtggttgtaaccgtcgaaattcatattaatgactct 12528583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 18 - 151
Target Start/End: Complemental strand, 23984169 - 23984039
Alignment:
Q  18 aggtgaactgaagaatgaaggtatttgttgaagttggaagcttatttatagtctaaaacaagccttaagtcattaatacagtcaacgaaaacaagttagt 117  Q
    ||||||| ||||||||||||||||||||||||| ||||| | ||||||||| |||||||||| | || |||||   ||||||||| ||||||| ||||||    
T  23984169 aggtgaagtgaagaatgaaggtatttgttgaagatggaaacctatttatagcctaaaacaagtcctaggtcat---tacagtcaatgaaaacatgttagt 23984073  T
Q  118 ggttgtaaccgtccaaacccacattaatggctct 151  Q
    |||||||||||||||||||| |||||||| ||||    
T  23984072 ggttgtaaccgtccaaaccctcattaatgactct 23984039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 26 - 166
Target Start/End: Complemental strand, 12700664 - 12700521
Alignment:
Q  26 tgaagaatgaaggtatttgttgaagttggaagcttatttatagtctaaaacaagccttaagtcattaatacagtcaacgaaaacaagtta---gtggttg 122  Q
    |||||||||||| |||||||||||| ||||||| ||||||||| |||||||||| | ||  |||||||||||||||| |||||   ||||   |||||||    
T  12700664 tgaagaatgaagatatttgttgaagatggaagcctatttatagcctaaaacaagtcctagatcattaatacagtcaatgaaaatgtgttagtggtggttg 12700565  T
Q  123 taaccgtccaaacccacattaatggctctgaatctttccggatt 166  Q
    |||| |||||||| ||||||||||||||||||||||||| ||||    
T  12700564 taactgtccaaacgcacattaatggctctgaatctttccagatt 12700521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 18 - 166
Target Start/End: Complemental strand, 3517708 - 3517560
Alignment:
Q  18 aggtgaactgaagaatgaaggtatttgttgaagttggaagcttatttatagtctaaaacaagccttaagtcattaatacagtcaacgaaaacaagttagt 117  Q
    ||||||| ||||||||||||||||||||||||| |  |||  ||||||||| |||||||||  | || |||||||   ||||||| ||||||  ||||||    
T  3517708 aggtgaagtgaagaatgaaggtatttgttgaagataaaagtctatttatagcctaaaacaactcctaggtcatta---cagtcaatgaaaacgtgttagt 3517612  T
Q  118 ggttgt---aaccgtccaaacccacattaatggctctgaatctttccggatt 166  Q
    ||||||   |||||||||||||||||||||||||||||||||||||||||||    
T  3517611 ggttgttgtaaccgtccaaacccacattaatggctctgaatctttccggatt 3517560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 18 - 159
Target Start/End: Original strand, 41723533 - 41723676
Alignment:
Q  18 aggtgaactgaagaatgaaggtatttgttgaagttggaagcttatttatagtctaaaacaagccttaagtcattaatacagtcaacgaaaacaagttagt 117  Q
    ||||||| ||||||||||||||||||||||||| || |||| ||||||||| |||||||||| || | |||||||||| |||||| ||||||  ||| ||    
T  41723533 aggtgaagtgaagaatgaaggtatttgttgaagatgaaagcctatttatagcctaaaacaagtct-aggtcattaatatagtcaatgaaaacgtgttggt 41723631  T
Q  118 ggttgta---accgtccaaacccacattaatggctctgaatcttt 159  Q
    ||||||    | |||||||||||||||||||||||||||||||||    
T  41723632 ggttgttgttatcgtccaaacccacattaatggctctgaatcttt 41723676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 208 - 298
Target Start/End: Original strand, 12528704 - 12528794
Alignment:
Q  208 tccgtaaaacaaaggtacatttcggattttattttccggaatgcatcagtcatgaccggtggtctgcaccacacgtttttgtcggtggtca 298  Q
    |||| |||||| | || |||| |||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  12528704 tccggaaaacagatgtgcattccggattttatattccggaatgcatcagtcatggccggtggtctgcaccacacgtttttgtcggtggtca 12528794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 18 - 146
Target Start/End: Original strand, 27216803 - 27216931
Alignment:
Q  18 aggtgaactgaagaatgaaggtatttgttgaagttggaagcttatttatagtctaaaacaagccttaagtcattaatacagtcaacgaaaacaagttagt 117  Q
    ||||||| ||||||||||| |||||| |||||| || |||| ||||||||| |||||||||| | || ||||||| |||| |||| ||||||  ||||||    
T  27216803 aggtgaagtgaagaatgaaagtattttttgaagatgaaagcctatttatagcctaaaacaagtcctaggtcattagtacaatcaatgaaaacgtgttagt 27216902  T
Q  118 ggttgtaaccgtccaaacccacattaatg 146  Q
    ||||||||||||||||||  |||||||||    
T  27216903 ggttgtaaccgtccaaacatacattaatg 27216931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 231 - 298
Target Start/End: Complemental strand, 3517464 - 3517397
Alignment:
Q  231 ggattttattttccggaatgcatcagtcatgaccggtggtctgcaccacacgtttttgtcggtggtca 298  Q
    ||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3517464 ggattatatattccggaatgcatcagtcatgaccggtggtctgcaccacacgtttttgtcggtggtca 3517397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 225 - 298
Target Start/End: Complemental strand, 42882470 - 42882397
Alignment:
Q  225 catttcggattttattttccggaatgcatcagtcatgaccggtggtctgcaccacacgtttttgtcggtggtca 298  Q
    |||||||||||||||||||||||||||||||||||||  | |||||||||| ||||||||||||||||||||||    
T  42882470 catttcggattttattttccggaatgcatcagtcatggtcagtggtctgcatcacacgtttttgtcggtggtca 42882397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 18 - 101
Target Start/End: Complemental strand, 44757664 - 44757581
Alignment:
Q  18 aggtgaactgaagaatgaaggtatttgttgaagttggaagcttatttatagtctaaaacaagccttaagtcattaatacagtca 101  Q
    ||||||| ||||||||||||||||||||||||| ||||||| ||||||||| |||||||||| | || ||||||||||||||||    
T  44757664 aggtgaagtgaagaatgaaggtatttgttgaagatggaagcctatttatagcctaaaacaagtcctaggtcattaatacagtca 44757581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 208 - 298
Target Start/End: Original strand, 49851967 - 49852058
Alignment:
Q  208 tccgtaaaacaaaggtacatttcggattttattttccggaatgcatcag-tcatgaccggtggtctgcaccacacgtttttgtcggtggtca 298  Q
    |||| ||||||||||||||||  |||||||||||| ||||||||||||| ||||| |||||||| ||||||||| |||||||||||||||||    
T  49851967 tccgaaaaacaaaggtacattctggattttattttgcggaatgcatcagttcatggccggtggtttgcaccacatgtttttgtcggtggtca 49852058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 247 - 339
Target Start/End: Complemental strand, 52632202 - 52632110
Alignment:
Q  247 aatgcatcagtcatgaccggtggtctgcaccacacgtttttgtcggtggtcagatnnnnnnnnntgcgttttaccacgttttttgactgcatt 339  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||| |          ||||||||||||||||||||||||||||    
T  52632202 aatgcatcagtcatggccggtggtctgcaccacacgtttttgtcggtggtcaggtaaaaaaaaacgcgttttaccacgttttttgactgcatt 52632110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 230 - 298
Target Start/End: Original strand, 44496748 - 44496816
Alignment:
Q  230 cggattttattttccggaatgcatcagtcatgaccggtggtctgcaccacacgtttttgtcggtggtca 298  Q
    |||||| ||| |||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||    
T  44496748 cggattgtatattccggaatgtatcagtcatggccggtggtctgcaccacacgtttttgtcggtggtca 44496816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 208 - 298
Target Start/End: Complemental strand, 11952300 - 11952210
Alignment:
Q  208 tccgtaaaacaaaggtacatttcggattttattttccggaatgcatcagtcatgaccggtggtctgcaccacacgtttttgtcggtggtca 298  Q
    |||| |||||||||||||||| || |||||||||||| |  ||||||||||||| |||||||||||||| |||| |||||||| |||||||    
T  11952300 tccggaaaacaaaggtacattccgaattttattttccaggttgcatcagtcatggccggtggtctgcacaacacatttttgtcagtggtca 11952210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 225 - 299
Target Start/End: Original strand, 29961653 - 29961727
Alignment:
Q  225 catttcggattttattttccggaatgcatcagtcatgaccggtggtctgcaccacacgtttttgtcggtggtcag 299  Q
    |||| |||||||||| ||| ||||||||||||||||| || ||||| ||||||||||||||||||||||||||||    
T  29961653 cattccggattttatattctggaatgcatcagtcatggccagtggtttgcaccacacgtttttgtcggtggtcag 29961727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 232 - 298
Target Start/End: Complemental strand, 50261847 - 50261781
Alignment:
Q  232 gattttattttccggaatgcatcagtcatgaccggtggtctgcaccacacgtttttgtcggtggtca 298  Q
    |||||||| |||||||||||||| |||||| ||||||||||||||||||| ||||||||||||||||    
T  50261847 gattttatattccggaatgcatcggtcatggccggtggtctgcaccacacatttttgtcggtggtca 50261781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 115 - 166
Target Start/End: Original strand, 22858800 - 22858851
Alignment:
Q  115 agtggttgtaaccgtccaaacccacattaatggctctgaatctttccggatt 166  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  22858800 agtggttgtaaccgtcaaaacccacattaatggctctgaatctttccggatt 22858851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 208 - 299
Target Start/End: Original strand, 41086658 - 41086749
Alignment:
Q  208 tccgtaaaacaaaggtacatttcggattttattttccggaatgcatcagtcatgaccggtggtctgcaccacacgtttttgtcggtggtcag 299  Q
    |||| |||||| | || |||| |||||||||| ||||| ||||||||||| ||| | ||||||||||||||||||||||||||| |||||||    
T  41086658 tccggaaaacagatgtgcattccggattttatattccgaaatgcatcagttatggctggtggtctgcaccacacgtttttgtcgttggtcag 41086749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 208 - 299
Target Start/End: Original strand, 41091426 - 41091517
Alignment:
Q  208 tccgtaaaacaaaggtacatttcggattttattttccggaatgcatcagtcatgaccggtggtctgcaccacacgtttttgtcggtggtcag 299  Q
    |||| |||||| | || |||| |||||||||| ||||| ||||||||||| ||| | ||||||||||||||||||||||||||| |||||||    
T  41091426 tccggaaaacagatgtgcattccggattttatattccgaaatgcatcagttatggctggtggtctgcaccacacgtttttgtcgttggtcag 41091517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 204 - 298
Target Start/End: Original strand, 22858920 - 22859014
Alignment:
Q  204 ttaatccgtaaaacaaaggtacatttcggattttattttccggaatgcatcagtcatgaccggtggtctgcaccacacgtttttgtcggtggtca 298  Q
    |||||||| |||||| | || |||| |||||| ||| ||||||||||||  ||||||| ||||||||||||||||||| |||| |||||||||||    
T  22858920 ttaatccggaaaacagatgtgcattccggattgtatattccggaatgcactagtcatggccggtggtctgcaccacacattttcgtcggtggtca 22859014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 232 - 298
Target Start/End: Complemental strand, 23983894 - 23983828
Alignment:
Q  232 gattttattttccggaatgcatcagtcatgaccggtggtctgcaccacacgtttttgtcggtggtca 298  Q
    |||||||| |||  |||||||||||| ||| ||||||||||||||||||||||||||||||||||||    
T  23983894 gattttatattcttgaatgcatcagtaatggccggtggtctgcaccacacgtttttgtcggtggtca 23983828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 225 - 291
Target Start/End: Complemental strand, 41900156 - 41900090
Alignment:
Q  225 catttcggattttattttccggaatgcatcagtcatgaccggtggtctgcaccacacgtttttgtcg 291  Q
    |||| |||||||||| |||| |||||||||||||||| |||||||||||||||||| ||||||||||    
T  41900156 cattccggattttatattccagaatgcatcagtcatggccggtggtctgcaccacaagtttttgtcg 41900090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 230 - 287
Target Start/End: Original strand, 41723793 - 41723850
Alignment:
Q  230 cggattttattttccggaatgcatcagtcatgaccggtggtctgcaccacacgttttt 287  Q
    |||||| ||| ||||||||||||||||||||| |||||||||||||||||||||||||    
T  41723793 cggattatatattccggaatgcatcagtcatggccggtggtctgcaccacacgttttt 41723850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 241 - 298
Target Start/End: Complemental strand, 48964827 - 48964770
Alignment:
Q  241 ttccggaatgcatcagtcatgaccggtggtctgcaccacacgtttttgtcggtggtca 298  Q
    |||| ||||||||||||||||  |||||||||||||||||||||||||||||||||||    
T  48964827 ttccagaatgcatcagtcatggtcggtggtctgcaccacacgtttttgtcggtggtca 48964770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 93 - 166
Target Start/End: Complemental strand, 48964986 - 48964913
Alignment:
Q  93 atacagtcaacgaaaacaagttagtggttgtaaccgtccaaacccacattaatggctctgaatctttccggatt 166  Q
    |||||||||| ||||||  ||||||| || |||||||||||||||||||||||| |||||||||||| ||||||    
T  48964986 atacagtcaatgaaaacgtgttagtgattctaaccgtccaaacccacattaatgactctgaatcttttcggatt 48964913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 213 - 298
Target Start/End: Original strand, 27217061 - 27217148
Alignment:
Q  213 aaaacaaaggtacatttcggattttattttccggaatgcatcag--tcatgaccggtggtctgcaccacacgtttttgtcggtggtca 298  Q
    |||||||||||||||| | |||| ||||||||||| ||||||||  ||||| ||| |||| ||||||||| |||||||||||||||||    
T  27217061 aaaacaaaggtacattccagattatattttccggactgcatcagtatcatggccgatggtttgcaccacatgtttttgtcggtggtca 27217148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 230 - 294
Target Start/End: Complemental strand, 14587212 - 14587148
Alignment:
Q  230 cggattttattttccggaatgcatcagtcatgaccggtggtctgcaccacacgtttttgtcggtg 294  Q
    |||||| ||| ||||| ||||||||||||||| ||| ||||||||||||||||||||||| ||||    
T  14587212 cggattatatattccgtaatgcatcagtcatggccgatggtctgcaccacacgtttttgttggtg 14587148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 208 - 298
Target Start/End: Original strand, 38860935 - 38861022
Alignment:
Q  208 tccgtaaaacaaaggtacatttcggattttattttccggaatgcatcagtcatgaccggtggtctgcaccacacgtttttgtcggtggtca 298  Q
    |||| |||||| | || |||| |||||||||| ||||||||||||||||||||| ||   ||  |||||||||||||||||||||||||||    
T  38860935 tccggaaaacagatgtgcattccggattttatattccggaatgcatcagtcatggcc---ggaatgcaccacacgtttttgtcggtggtca 38861022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 204 - 298
Target Start/End: Complemental strand, 12700454 - 12700360
Alignment:
Q  204 ttaatccgtaaaacaaaggtacatttcggattttattttccggaatgcatcagtcatgaccggtggtctgcaccacacgtttttgtcggtggtca 298  Q
    |||||||| |||||| | || | || |||||| ||| ||  ||||| ||||||||||| | || |||||||||||||||||||||||||||||||    
T  12700454 ttaatccggaaaacagatgtgctttccggattatatattttggaatacatcagtcatggctggaggtctgcaccacacgtttttgtcggtggtca 12700360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 245 - 295
Target Start/End: Original strand, 37952578 - 37952628
Alignment:
Q  245 ggaatgcatcagtcatgaccggtggtctgcaccacacgtttttgtcggtgg 295  Q
    |||||||||||||||||  |||||||||||||||||||||||||| |||||    
T  37952578 ggaatgcatcagtcatggtcggtggtctgcaccacacgtttttgttggtgg 37952628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 241 - 298
Target Start/End: Original strand, 33801605 - 33801661
Alignment:
Q  241 ttccggaatgcatcagtcatgaccggtggtctgcaccacacgtttttgtcggtggtca 298  Q
    |||||||| ||||||||||||  ||||||||||||||||||||||||| |||||||||    
T  33801605 ttccggaaggcatcagtcatggtcggtggtctgcaccacacgtttttg-cggtggtca 33801661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 263 - 298
Target Start/End: Complemental strand, 44755252 - 44755217
Alignment:
Q  263 ccggtggtctgcaccacacgtttttgtcggtggtca 298  Q
    ||||||||||||| ||||||||||||||||||||||    
T  44755252 ccggtggtctgcatcacacgtttttgtcggtggtca 44755217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 26 - 67
Target Start/End: Complemental strand, 48965025 - 48964984
Alignment:
Q  26 tgaagaatgaaggtatttgttgaagttggaagcttatttata 67  Q
    ||||||||||| ||||||||||||| ||||||| ||||||||    
T  48965025 tgaagaatgaacgtatttgttgaagatggaagcctatttata 48964984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 85; Significance: 2e-40; HSPs: 16)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 18 - 166
Target Start/End: Complemental strand, 9305086 - 9304938
Alignment:
Q  18 aggtgaactgaagaatgaaggtatttgttgaagttggaagcttatttatagtctaaaacaagccttaagtcattaatacagtcaacgaaaacaagttagt 117  Q
    ||||||| ||| ||||||||||||||||| ||| |  |||| ||||||||| |||||||||| | || ||||||||||||||||| ||||||  ||||||    
T  9305086 aggtgaagtgatgaatgaaggtatttgtttaaggtaaaagcctatttatagcctaaaacaagtcctaggtcattaatacagtcaatgaaaacgtgttagt 9304987  T
Q  118 ggttgtaaccgtccaaacccacattaatggctctgaatctttccggatt 166  Q
    ||||||||||||| ||||||||| |||||||||||||||||||||||||    
T  9304986 ggttgtaaccgtcaaaacccacaataatggctctgaatctttccggatt 9304938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 18 - 166
Target Start/End: Original strand, 31271354 - 31271502
Alignment:
Q  18 aggtgaactgaagaatgaaggtatttgttgaagttggaagcttatttatagtctaaaacaagccttaagtcattaatacagtcaacgaaaacaagttagt 117  Q
    ||||||| |||| |||||| ||||||||||||| ||||||| ||||||||| |||||||||| | || |||||||||||||| || ||||||  || |||    
T  31271354 aggtgaagtgaaaaatgaaagtatttgttgaagatggaagcctatttatagcctaaaacaagtcataggtcattaatacagttaatgaaaacgtgtaagt 31271453  T
Q  118 ggttgtaaccgtccaaacccacattaatggctctgaatctttccggatt 166  Q
    |||||||| |||||||||||||||||||||||||||||||||| |||||    
T  31271454 ggttgtaatcgtccaaacccacattaatggctctgaatctttcgggatt 31271502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 18 - 150
Target Start/End: Original strand, 31318539 - 31318671
Alignment:
Q  18 aggtgaactgaagaatgaaggtatttgttgaagttggaagcttatttatagtctaaaacaagccttaagtcattaatacagtcaacgaaaacaagttagt 117  Q
    ||||||| ||||||||||||||||||||||||| || |||| ||||||||| |||||||||| | || ||||||| ||||||||| ||||||  ||||||    
T  31318539 aggtgaagtgaagaatgaaggtatttgttgaagatgaaagcctatttatagcctaaaacaagtcctaggtcattactacagtcaatgaaaacgtgttagt 31318638  T
Q  118 ggttgtaaccgtccaaacccacattaatggctc 150  Q
    |||||||||||||||||||||||||||||||||    
T  31318639 ggttgtaaccgtccaaacccacattaatggctc 31318671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 21 - 164
Target Start/End: Complemental strand, 31723001 - 31722855
Alignment:
Q  21 tgaactgaagaatgaaggtatttgttgaagttggaagcttatttatagtctaaaacaagccttaagtcattaatacagtcaacgaaaacaagttagtgg- 119  Q
    |||| |||||||||||||| |||||||||| ||||||| ||||||||| |||||||||| | || ||||||||||||||||| ||||||  ||||||||     
T  31723001 tgaagtgaagaatgaaggtctttgttgaagatggaagcctatttatagcctaaaacaagtcctaggtcattaatacagtcaatgaaaacgtgttagtggt 31722902  T
Q  120 --ttgtaaccgtccaaacccacattaatggctctgaatctttccgga 164  Q
      |||||||| ||||||||||||||||||||||||||||||||||||    
T  31722901 tgttgtaaccatccaaacccacattaatggctctgaatctttccgga 31722855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 18 - 166
Target Start/End: Original strand, 439036 - 439187
Alignment:
Q  18 aggtgaactgaagaatgaaggtatttgttgaagttggaagcttatttatagtctaaaacaagccttaagtcattaatacagtcaacgaaaacaagttagt 117  Q
    ||||||| ||||||||||||||||||||||||| ||||||  ||||||||| |||||||||| | || ||||||| || |||||||||||||  ||||||    
T  439036 aggtgaagtgaagaatgaaggtatttgttgaagatggaagtctatttatagcctaaaacaagtcctaggtcattagtatagtcaacgaaaacgtgttagt 439135  T
Q  118 g---gttgtaaccgtccaaacccacattaatggctctgaatctttccggatt 166  Q
    |   |||||||||||||||||||||||||||| || ||||||||| ||||||    
T  439136 ggttgttgtaaccgtccaaacccacattaatgactttgaatcttttcggatt 439187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 18 - 166
Target Start/End: Original strand, 16395320 - 16395471
Alignment:
Q  18 aggtgaactgaagaatgaaggtatttgttgaagttggaagcttatttatagtctaaaacaagccttaagtcattaatacagtcaacgaaaacaagttagt 117  Q
    ||||||| ||||||||||| ||||||||||| | ||||||| ||||||||| |||||||||| | || |||||||||| |||||| ||||||  ||||||    
T  16395320 aggtgaagtgaagaatgaaagtatttgttgacgatggaagcctatttatagcctaaaacaagtcctatgtcattaatatagtcaatgaaaacgtgttagt 16395419  T
Q  118 g---gttgtaaccgtccaaacccacattaatggctctgaatctttccggatt 166  Q
    |   ||||||||| ||||||||||||||||||||| ||||| ||||||||||    
T  16395420 ggttgttgtaaccatccaaacccacattaatggctttgaatatttccggatt 16395471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 208 - 299
Target Start/End: Complemental strand, 9304853 - 9304762
Alignment:
Q  208 tccgtaaaacaaaggtacatttcggattttattttccggaatgcatcagtcatgaccggtggtctgcaccacacgtttttgtcggtggtcag 299  Q
    |||| |||| ||||||||||| || |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  9304853 tccggaaaataaaggtacattccgtattttattttccggaatgtatcagtcatgaccggtggtctgcaccacacgtttttgtcggtggtcag 9304762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 18 - 160
Target Start/End: Original strand, 303759 - 303904
Alignment:
Q  18 aggtgaactgaagaatgaaggtatttgttgaagttggaagcttatttatagtctaaaacaagccttaagtcattaatacagtcaacgaaaacaagttagt 117  Q
    ||||||| ||||||||||||||||||||||||  ||||||| ||||||||| |||||||||| | || |||||||||||| |||| ||||||  ||| ||    
T  303759 aggtgaagtgaagaatgaaggtatttgttgaaaatggaagcctatttatagcctaaaacaagtcctaggtcattaatacaatcaatgaaaacgtgttggt 303858  T
Q  118 ggttg---taaccgtccaaacccacattaatggctctgaatctttc 160  Q
    |||||   |||||||||||||  ||||||||| |||||||| ||||    
T  303859 ggttgttataaccgtccaaacttacattaatgactctgaatgtttc 303904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 232 - 298
Target Start/End: Original strand, 31271614 - 31271680
Alignment:
Q  232 gattttattttccggaatgcatcagtcatgaccggtggtctgcaccacacgtttttgtcggtggtca 298  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  31271614 gattttatattccggaatgcatcagtcatgaccggtggtctgcaccacacgtttttgtctgtggtca 31271680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 232 - 298
Target Start/End: Complemental strand, 31722755 - 31722689
Alignment:
Q  232 gattttattttccggaatgcatcagtcatgaccggtggtctgcaccacacgtttttgtcggtggtca 298  Q
    |||| ||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  31722755 gattatatattccggaatgcatcagtcatggccggtggtctgcaccacacgtttttgtcggtggtca 31722689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 213 - 298
Target Start/End: Original strand, 16395564 - 16395649
Alignment:
Q  213 aaaacaaaggtacatttcggattttattttccggaatgcatcagtcatgaccggtggtctgcaccacacgtttttgtcggtggtca 298  Q
    |||||||| || | || |||||| ||| ||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||    
T  16395564 aaaacaaatgtgctttccggattatatattccggaatgcatcagtcatggccggtggtctgcaccacacgtttttgtcgttggtca 16395649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 231 - 297
Target Start/End: Original strand, 304020 - 304085
Alignment:
Q  231 ggattttattttccggaatgcatcagtcatgaccggtggtctgcaccacacgtttttgtcggtggtc 297  Q
    ||||||||| ||||||||||||||||||||| | |||||||||||||||||||||||||||||||||    
T  304020 ggattttatattccggaatgcatcagtcatggc-ggtggtctgcaccacacgtttttgtcggtggtc 304085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 230 - 299
Target Start/End: Original strand, 11975247 - 11975316
Alignment:
Q  230 cggattttattttccggaatgcatcagtcatgaccggtggtctgcaccacacgtttttgtcggtggtcag 299  Q
    |||||| ||| ||||||||||||||||||||| | |||||| |||||||||| |||||||||||||||||    
T  11975247 cggattatatattccggaatgcatcagtcatggctggtggtttgcaccacacttttttgtcggtggtcag 11975316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 231 - 294
Target Start/End: Original strand, 439298 - 439361
Alignment:
Q  231 ggattttattttccggaatgcatcagtcatgaccggtggtctgcaccacacgtttttgtcggtg 294  Q
    ||||| ||| |||||||||||||| |||||| |||||||||| |||||||||||||||||||||    
T  439298 ggattatatattccggaatgcatcggtcatggccggtggtcttcaccacacgtttttgtcggtg 439361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 18 - 134
Target Start/End: Original strand, 20818537 - 20818653
Alignment:
Q  18 aggtgaactgaagaatgaaggtatttgttgaagttggaagcttatttatagtctaaaacaagccttaagtcattaatacagtcaacgaaaacaagttagt 117  Q
    ||||||| | ||||||||||| ||||||||||| ||||||  |||||||||||||||| ||| | || ||||| | |||| |||| ||||||  ||| ||    
T  20818537 aggtgaagtaaagaatgaaggaatttgttgaagatggaagtatatttatagtctaaaataagtcatacgtcataagtacaatcaatgaaaacgtgtttgt 20818636  T
Q  118 ggttgtaaccgtccaaa 134  Q
    |||  ||||||||||||    
T  20818637 ggtgctaaccgtccaaa 20818653  T

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Target: chr6; HSP #16
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 241 - 298
Target Start/End: Original strand, 31318792 - 31318849
Alignment:
Q  241 ttccggaatgcatcagtcatgaccggtggtctgcaccacacgtttttgtcggtggtca 298  Q
    |||| |||||||||||||||    ||||||||||||||||||||||||||| ||||||    
T  31318792 ttccagaatgcatcagtcataggtggtggtctgcaccacacgtttttgtcgatggtca 31318849  T

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Target: scaffold0121 (Bit Score: 46; Significance: 4e-17; HSPs: 1)
Name: scaffold0121
Description:

Target: scaffold0121; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 208 - 298
Target Start/End: Complemental strand, 47331 - 47239
Alignment:
Q  208 tccgtaaaacaaaggtacatttcggattttattttccggaatgcatcagt--catgaccggtggtctgcaccacacgtttttgtcggtggtca 298  Q
    |||| |||||||||||||| | |||||| ||||||||||| ||||| |||  |||| |||||||| ||||||||| |||||||||||||||||    
T  47331 tccggaaaacaaaggtacactccggattatattttccggactgcattagtgtcatggccggtggtttgcaccacatgtttttgtcggtggtca 47239  T

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Target: scaffold0054 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 21 - 102
Target Start/End: Complemental strand, 19152 - 19071
Alignment:
Q  21 tgaactgaagaatgaaggtatttgttgaagttggaagcttatttatagtctaaaacaagccttaagtcattaatacagtcaa 102  Q
    |||| ||||||||||||| ||||||||||| ||  ||| ||||||||| |||||||||| |||| ||||| | |||||||||    
T  19152 tgaagtgaagaatgaaggaatttgttgaagatgagagcctatttatagcctaaaacaagtcttaggtcataagtacagtcaa 19071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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