View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF15395_low_48 (Length: 216)

Name: NF15395_low_48
Description: NF15395
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF15395_low_48
NF15395_low_48
[»] chr1 (55 HSPs)
chr1 (117-202)||(33161699-33161784)
chr1 (22-97)||(52180533-52180608)
chr1 (22-90)||(24230607-24230675)
chr1 (22-96)||(35873968-35874042)
chr1 (24-97)||(38261106-38261178)
chr1 (24-97)||(44263959-44264032)
chr1 (27-97)||(31530338-31530408)
chr1 (27-97)||(34038192-34038262)
chr1 (24-97)||(12105191-12105264)
chr1 (24-97)||(46641819-46641892)
chr1 (24-97)||(47544599-47544672)
chr1 (31-90)||(48976913-48976972)
chr1 (24-90)||(8396651-8396717)
chr1 (24-90)||(31821609-31821675)
chr1 (27-97)||(42275366-42275436)
chr1 (24-82)||(52441123-52441181)
chr1 (24-77)||(6329299-6329352)
chr1 (24-97)||(30571311-30571384)
chr1 (24-97)||(52861328-52861401)
chr1 (24-90)||(2249625-2249691)
chr1 (24-85)||(12907561-12907622)
chr1 (24-97)||(13202967-13203040)
chr1 (24-97)||(30320921-30320994)
chr1 (27-90)||(9587949-9588012)
chr1 (29-76)||(21073072-21073119)
chr1 (24-97)||(47693504-47693574)
chr1 (24-90)||(24003457-24003523)
chr1 (38-96)||(51056512-51056570)
chr1 (24-97)||(25702466-25702539)
chr1 (24-97)||(45622511-45622584)
chr1 (24-97)||(52345630-52345703)
chr1 (24-80)||(7227618-7227674)
chr1 (24-80)||(17553864-17553920)
chr1 (24-90)||(14152725-14152792)
chr1 (24-75)||(31075661-31075712)
chr1 (24-75)||(31084909-31084960)
chr1 (24-75)||(46362076-46362127)
chr1 (33-79)||(477491-477537)
chr1 (24-97)||(6966211-6966284)
chr1 (24-97)||(41541509-41541581)
chr1 (24-90)||(38718034-38718100)
chr1 (24-90)||(51787502-51787568)
chr1 (24-97)||(24381622-24381695)
chr1 (27-88)||(30263622-30263683)
chr1 (36-97)||(46235146-46235207)
chr1 (24-79)||(6526477-6526532)
chr1 (24-97)||(10348058-10348128)
chr1 (36-97)||(21883125-21883187)
chr1 (50-96)||(46918710-46918756)
chr1 (39-89)||(21073116-21073170)
chr1 (24-80)||(32912260-32912314)
chr1 (24-76)||(33986176-33986226)
chr1 (27-89)||(28624783-28624845)
chr1 (24-97)||(49982488-49982559)
chr1 (26-90)||(17525742-17525805)
[»] chr3 (62 HSPs)
chr3 (24-97)||(1129160-1129233)
chr3 (24-90)||(26456991-26457057)
chr3 (24-97)||(7862747-7862820)
chr3 (29-97)||(40478065-40478133)
chr3 (22-97)||(51344673-51344747)
chr3 (24-97)||(44379445-44379518)
chr3 (29-97)||(45538676-45538744)
chr3 (24-97)||(14653813-14653886)
chr3 (24-97)||(23456760-23456833)
chr3 (24-97)||(47746131-47746204)
chr3 (22-97)||(40474136-40474210)
chr3 (24-90)||(7352204-7352270)
chr3 (24-97)||(35501092-35501165)
chr3 (24-89)||(42621887-42621952)
chr3 (24-97)||(43745377-43745450)
chr3 (24-89)||(54788617-54788682)
chr3 (24-88)||(36099467-36099531)
chr3 (24-95)||(29491926-29491997)
chr3 (27-90)||(39678412-39678475)
chr3 (24-90)||(26850228-26850294)
chr3 (29-83)||(37127848-37127902)
chr3 (27-97)||(42478990-42479060)
chr3 (24-97)||(9507205-9507278)
chr3 (24-97)||(9515180-9515253)
chr3 (24-97)||(37520733-37520806)
chr3 (24-97)||(39987382-39987455)
chr3 (24-97)||(48825430-48825503)
chr3 (24-97)||(53289261-53289334)
chr3 (36-96)||(25834544-25834604)
chr3 (22-78)||(41282580-41282636)
chr3 (24-79)||(39252939-39252994)
chr3 (24-90)||(30349306-30349372)
chr3 (24-82)||(36220708-36220766)
chr3 (24-78)||(40784575-40784629)
chr3 (24-89)||(29388734-29388799)
chr3 (24-97)||(34825570-34825643)
chr3 (24-97)||(54428797-54428870)
chr3 (24-80)||(10279053-10279109)
chr3 (24-88)||(24170234-24170297)
chr3 (24-88)||(26012237-26012301)
chr3 (29-97)||(35137747-35137815)
chr3 (24-90)||(41982287-41982353)
chr3 (24-97)||(4817107-4817179)
chr3 (24-97)||(15997123-15997196)
chr3 (24-97)||(25482282-25482355)
chr3 (24-97)||(26885004-26885077)
chr3 (24-97)||(44522293-44522366)
chr3 (24-88)||(41217357-41217421)
chr3 (33-97)||(44653482-44653546)
chr3 (24-90)||(1021278-1021342)
chr3 (27-90)||(13756344-13756407)
chr3 (24-75)||(46507413-46507464)
chr3 (24-90)||(40021382-40021448)
chr3 (24-73)||(33006601-33006650)
chr3 (36-97)||(35389322-35389383)
chr3 (24-80)||(51756141-51756197)
chr3 (26-97)||(19914339-19914409)
chr3 (24-79)||(32636929-32636984)
chr3 (27-82)||(50258106-50258161)
chr3 (26-97)||(9252158-9252228)
chr3 (51-90)||(27045023-27045062)
chr3 (46-75)||(51350699-51350728)
[»] scaffold0667 (1 HSPs)
scaffold0667 (24-97)||(135-208)
[»] chr8 (38 HSPs)
chr8 (24-97)||(2261316-2261389)
chr8 (24-97)||(29454174-29454247)
chr8 (24-88)||(40776677-40776741)
chr8 (24-97)||(118112-118185)
chr8 (22-97)||(45452417-45452491)
chr8 (24-90)||(1043362-1043428)
chr8 (24-90)||(40578998-40579064)
chr8 (24-97)||(10706586-10706659)
chr8 (24-97)||(29265620-29265693)
chr8 (24-97)||(37675968-37676041)
chr8 (24-89)||(26988426-26988491)
chr8 (24-97)||(38210622-38210695)
chr8 (24-97)||(39300114-39300187)
chr8 (24-97)||(39646668-39646741)
chr8 (24-90)||(34165947-34166014)
chr8 (33-96)||(34634165-34634228)
chr8 (24-82)||(6982831-6982889)
chr8 (27-97)||(7128121-7128191)
chr8 (24-90)||(9497841-9497907)
chr8 (24-82)||(36667538-36667596)
chr8 (24-90)||(44000599-44000665)
chr8 (24-97)||(15451452-15451525)
chr8 (24-89)||(26522005-26522070)
chr8 (24-97)||(36162495-36162568)
chr8 (24-80)||(40267785-40267841)
chr8 (24-75)||(6630962-6631013)
chr8 (24-75)||(41720551-41720602)
chr8 (36-90)||(5328915-5328969)
chr8 (24-90)||(38329489-38329555)
chr8 (36-90)||(43841881-43841935)
chr8 (24-89)||(27847771-27847836)
chr8 (24-77)||(2749366-2749419)
chr8 (36-79)||(45210545-45210588)
chr8 (27-97)||(17642379-17642448)
chr8 (26-90)||(17792509-17792572)
chr8 (26-90)||(24937623-24937686)
chr8 (26-90)||(27172219-27172282)
chr8 (50-97)||(41423667-41423715)
[»] chr5 (38 HSPs)
chr5 (24-90)||(34259842-34259908)
chr5 (24-90)||(5360028-5360094)
chr5 (24-97)||(3426092-3426165)
chr5 (24-97)||(13119102-13119174)
chr5 (24-97)||(35370429-35370502)
chr5 (24-97)||(40803623-40803696)
chr5 (24-90)||(2852000-2852066)
chr5 (24-97)||(6260320-6260393)
chr5 (24-97)||(9604462-9604535)
chr5 (24-97)||(30753478-30753551)
chr5 (24-92)||(8258697-8258765)
chr5 (29-97)||(42486636-42486704)
chr5 (24-71)||(12334610-12334657)
chr5 (24-78)||(702221-702275)
chr5 (24-90)||(14434856-14434922)
chr5 (24-90)||(27980077-27980142)
chr5 (24-97)||(13127283-13127356)
chr5 (24-97)||(29960169-29960242)
chr5 (24-83)||(42597518-42597577)
chr5 (24-90)||(28318385-28318451)
chr5 (24-90)||(33678460-33678526)
chr5 (24-97)||(479705-479778)
chr5 (24-97)||(9913220-9913292)
chr5 (24-97)||(36427936-36428009)
chr5 (24-97)||(40563146-40563219)
chr5 (49-97)||(39816536-39816584)
chr5 (27-97)||(9910070-9910140)
chr5 (36-97)||(33210684-33210745)
chr5 (24-97)||(38293922-38293995)
chr5 (24-80)||(3024199-3024255)
chr5 (26-97)||(17069290-17069360)
chr5 (24-81)||(4617001-4617058)
chr5 (47-80)||(9630387-9630420)
chr5 (50-90)||(35162638-35162678)
chr5 (50-97)||(329069-329116)
chr5 (26-97)||(2270815-2270885)
chr5 (27-97)||(13091219-13091288)
chr5 (29-97)||(29744210-29744277)
[»] chr6 (24 HSPs)
chr6 (32-97)||(11763204-11763269)
chr6 (24-97)||(33574655-33574728)
chr6 (24-97)||(33574833-33574906)
chr6 (24-97)||(33574264-33574337)
chr6 (29-97)||(4509737-4509804)
chr6 (24-87)||(26958693-26958756)
chr6 (27-90)||(18772165-18772228)
chr6 (24-97)||(242916-242989)
chr6 (24-97)||(23416799-23416872)
chr6 (33-79)||(8549612-8549658)
chr6 (24-97)||(528836-528909)
chr6 (24-80)||(9687078-9687134)
chr6 (27-89)||(22755547-22755609)
chr6 (24-97)||(1245122-1245195)
chr6 (27-72)||(2565032-2565077)
chr6 (24-97)||(4576687-4576760)
chr6 (24-88)||(3141080-3141144)
chr6 (24-79)||(14779206-14779260)
chr6 (36-90)||(9662072-9662126)
chr6 (24-72)||(8309922-8309970)
chr6 (29-72)||(23068653-23068695)
chr6 (64-97)||(2565393-2565426)
chr6 (64-97)||(23069042-23069075)
chr6 (29-97)||(20469067-20469134)
[»] chr2 (31 HSPs)
chr2 (24-97)||(35895342-35895415)
chr2 (24-97)||(1580278-1580351)
chr2 (24-97)||(9122187-9122260)
chr2 (24-97)||(17451313-17451386)
chr2 (24-97)||(25331486-25331559)
chr2 (24-97)||(32602334-32602407)
chr2 (24-80)||(40946810-40946866)
chr2 (24-97)||(7673326-7673399)
chr2 (24-97)||(9589416-9589489)
chr2 (29-90)||(30981193-30981254)
chr2 (24-89)||(33493774-33493839)
chr2 (24-90)||(4297935-4298001)
chr2 (27-97)||(6945647-6945717)
chr2 (24-97)||(32401110-32401183)
chr2 (24-97)||(43440026-43440099)
chr2 (24-97)||(44143237-44143309)
chr2 (24-97)||(45157816-45157889)
chr2 (24-82)||(18998761-18998819)
chr2 (27-97)||(27401035-27401105)
chr2 (24-97)||(21404229-21404302)
chr2 (24-83)||(4049022-4049081)
chr2 (29-72)||(39620501-39620544)
chr2 (24-97)||(38073138-38073209)
chr2 (24-87)||(2283207-2283268)
chr2 (24-96)||(3261208-3261280)
chr2 (24-88)||(4740527-4740591)
chr2 (24-88)||(14840100-14840163)
chr2 (24-90)||(42640889-42640953)
chr2 (24-89)||(37781906-37781969)
chr2 (26-79)||(19268615-19268667)
chr2 (24-88)||(40495749-40495813)
[»] chr7 (38 HSPs)
chr7 (24-82)||(3214823-3214881)
chr7 (24-97)||(23406683-23406756)
chr7 (18-90)||(26413664-26413735)
chr7 (24-97)||(7574582-7574655)
chr7 (24-97)||(26605087-26605160)
chr7 (24-88)||(3602570-3602634)
chr7 (24-79)||(37504608-37504663)
chr7 (24-90)||(11750457-11750523)
chr7 (24-90)||(32529218-32529284)
chr7 (24-97)||(15716208-15716281)
chr7 (24-97)||(28264781-28264854)
chr7 (24-97)||(35291357-35291430)
chr7 (24-84)||(1269052-1269112)
chr7 (24-96)||(24952958-24953030)
chr7 (35-98)||(45232077-45232140)
chr7 (24-90)||(30076943-30077009)
chr7 (24-97)||(29606299-29606372)
chr7 (24-97)||(38665488-38665561)
chr7 (24-97)||(38666172-38666245)
chr7 (33-97)||(6791475-6791539)
chr7 (24-96)||(17306633-17306705)
chr7 (24-96)||(23110462-23110534)
chr7 (24-88)||(47642801-47642865)
chr7 (23-97)||(46575132-46575207)
chr7 (33-79)||(41968481-41968527)
chr7 (48-97)||(15954587-15954636)
chr7 (24-97)||(35358005-35358078)
chr7 (46-97)||(30891581-30891632)
chr7 (27-82)||(41046884-41046939)
chr7 (36-97)||(22967440-22967502)
chr7 (27-80)||(21936817-21936870)
chr7 (27-95)||(23561411-23561478)
chr7 (50-98)||(42584089-42584137)
chr7 (24-90)||(31311646-31311710)
chr7 (50-97)||(41769318-41769365)
chr7 (27-97)||(15877380-15877449)
chr7 (24-80)||(8577973-8578027)
chr7 (47-83)||(40331103-40331139)
[»] chr4 (52 HSPs)
chr4 (24-90)||(54996405-54996471)
chr4 (24-97)||(27990567-27990640)
chr4 (24-96)||(5970731-5970803)
chr4 (22-97)||(56303138-56303213)
chr4 (24-90)||(27761438-27761504)
chr4 (24-86)||(32845697-32845759)
chr4 (24-97)||(24535513-24535586)
chr4 (27-90)||(32288941-32289004)
chr4 (24-90)||(126880-126946)
chr4 (24-90)||(4720773-4720839)
chr4 (24-90)||(28835826-28835892)
chr4 (24-97)||(1857106-1857179)
chr4 (24-97)||(24979973-24980045)
chr4 (22-90)||(31999026-31999093)
chr4 (24-80)||(38008456-38008512)
chr4 (31-97)||(30348194-30348260)
chr4 (24-90)||(42177380-42177446)
chr4 (24-97)||(26118055-26118128)
chr4 (24-97)||(29364484-29364557)
chr4 (24-97)||(34829025-34829098)
chr4 (24-97)||(45692653-45692726)
chr4 (29-90)||(53936545-53936606)
chr4 (36-96)||(33491194-33491254)
chr4 (27-79)||(36631084-36631136)
chr4 (24-79)||(48647068-48647123)
chr4 (22-76)||(423453-423506)
chr4 (24-90)||(8256744-8256810)
chr4 (24-90)||(8270162-8270228)
chr4 (27-89)||(9356420-9356482)
chr4 (24-90)||(43735435-43735501)
chr4 (28-90)||(50733164-50733226)
chr4 (29-90)||(50383367-50383428)
chr4 (29-97)||(352505-352572)
chr4 (24-80)||(3763415-3763471)
chr4 (53-97)||(5340300-5340344)
chr4 (24-72)||(43147792-43147840)
chr4 (29-89)||(43363636-43363695)
chr4 (24-80)||(50607987-50608043)
chr4 (24-79)||(50776074-50776129)
chr4 (24-97)||(32570671-32570742)
chr4 (24-97)||(52607599-52607672)
chr4 (24-80)||(583072-583128)
chr4 (24-66)||(50498389-50498431)
chr4 (24-97)||(29582268-29582341)
chr4 (24-80)||(48262865-48262919)
chr4 (36-96)||(23058797-23058857)
chr4 (50-97)||(22077693-22077740)
chr4 (30-97)||(34936586-34936652)
chr4 (24-79)||(56104451-56104505)
chr4 (24-97)||(6807018-6807089)
chr4 (24-97)||(25607722-25607793)
chr4 (27-97)||(36091364-36091433)
[»] scaffold1319 (1 HSPs)
scaffold1319 (24-90)||(81-147)
[»] scaffold0432 (1 HSPs)
scaffold0432 (22-90)||(3067-3134)
[»] scaffold0923 (1 HSPs)
scaffold0923 (38-97)||(1-60)
[»] scaffold0308 (1 HSPs)
scaffold0308 (27-90)||(7509-7572)
[»] scaffold0005 (1 HSPs)
scaffold0005 (24-88)||(271010-271073)
[»] scaffold0271 (1 HSPs)
scaffold0271 (49-97)||(16987-17035)


Alignment Details
Target: chr1 (Bit Score: 82; Significance: 7e-39; HSPs: 55)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 117 - 202
Target Start/End: Complemental strand, 33161784 - 33161699
Alignment:
Q  117 atatattaaacccttatgctattttgtctccaacgaaaccctcaaaccatcgtagaagatttaccatgaaaactggcgacgatcat 202  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33161784 atatattaaactcttatgctattttgtctccaacgaaaccctcaaaccatcgtagaagatttaccatgaaaactggcgacgatcat 33161699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 22 - 97
Target Start/End: Original strand, 52180533 - 52180608
Alignment:
Q  22 ttttgacaaatagctatttattacataaaaaatgatcgttaatttataaaattatgaagcaggagtacccgtacac 97  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||    
T  52180533 ttttgacaaatagctatttattacataaaaaattatcgttaatttataaaattatgaagcaggagtaccggtacac 52180608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 22 - 90
Target Start/End: Complemental strand, 24230675 - 24230607
Alignment:
Q  22 ttttgacaaatagctatttattacataaaaaatgatcgttaatttataaaattatgaagcaggagtacc 90  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  24230675 ttttgacaaatagctatttattacataaaaaattatcgttaatttataaaattatgaagcaggagtacc 24230607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 22 - 96
Target Start/End: Complemental strand, 35874042 - 35873968
Alignment:
Q  22 ttttgacaaatagctatttattacataaaaaatgatcgttaatttataaaattatgaagcaggagtacccgtaca 96  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||    
T  35874042 ttttgacaaatagttatttattacataaaaaatgatcgttaatttataaaattatgaagcagaagtaccggtaca 35873968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 24 - 97
Target Start/End: Original strand, 38261106 - 38261178
Alignment:
Q  24 ttgacaaatagctatttattacataaaaaatgatcgttaatttataaaattatgaagcaggagtacccgtacac 97  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||    
T  38261106 ttgacaaatagctatttattacataaaaaatgatcgttaa-ttataaaattatgaagcaggagtaccggtacac 38261178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 24 - 97
Target Start/End: Original strand, 44263959 - 44264032
Alignment:
Q  24 ttgacaaatagctatttattacataaaaaatgatcgttaatttataaaattatgaagcaggagtacccgtacac 97  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||    
T  44263959 ttgacaaagagctatttattacataaaaaatgatcgttaatttataaaattatgaaacaggagtaccggtacac 44264032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 27 - 97
Target Start/End: Complemental strand, 31530408 - 31530338
Alignment:
Q  27 acaaatagctatttattacataaaaaatgatcgttaatttataaaattatgaagcaggagtacccgtacac 97  Q
    |||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||    
T  31530408 acaaatagttatttattacataaaaaattatcgttaatttataaaattatgaagcaggagtaccagtacac 31530338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 27 - 97
Target Start/End: Complemental strand, 34038262 - 34038192
Alignment:
Q  27 acaaatagctatttattacataaaaaatgatcgttaatttataaaattatgaagcaggagtacccgtacac 97  Q
    ||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  34038262 acaaataactatttatttcataaaaaatgatcgttaatttataaaattatgaagcaggagtaccggtacac 34038192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 24 - 97
Target Start/End: Complemental strand, 12105264 - 12105191
Alignment:
Q  24 ttgacaaatagctatttattacataaaaaatgatcgttaatttataaaattatgaagcaggagtacccgtacac 97  Q
    |||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||| ||||||| ||||||    
T  12105264 ttgacaaataactatttattacataaaaaattatcgttaatttataaaattatgaagcaagagtaccggtacac 12105191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 24 - 97
Target Start/End: Original strand, 46641819 - 46641892
Alignment:
Q  24 ttgacaaatagctatttattacataaaaaatgatcgttaatttataaaattatgaagcaggagtacccgtacac 97  Q
    |||||||||||||||||| ||||||||||||||||||| ||||||||||||| |||||||||||||| ||||||    
T  46641819 ttgacaaatagctatttactacataaaaaatgatcgttcatttataaaattaagaagcaggagtaccggtacac 46641892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 24 - 97
Target Start/End: Original strand, 47544599 - 47544672
Alignment:
Q  24 ttgacaaatagctatttattacataaaaaatgatcgttaatttataaaattatgaagcaggagtacccgtacac 97  Q
    |||||||||||||||||| ||||||||||||||||||| ||||||||||||| |||||||||||||| ||||||    
T  47544599 ttgacaaatagctatttactacataaaaaatgatcgttcatttataaaattaagaagcaggagtaccggtacac 47544672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 31 - 90
Target Start/End: Complemental strand, 48976972 - 48976913
Alignment:
Q  31 atagctatttattacataaaaaatgatcgttaatttataaaattatgaagcaggagtacc 90  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  48976972 atagttatttattacataaaaaatgatcgttaatttataaaattatgaagcaggagtacc 48976913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 24 - 90
Target Start/End: Original strand, 8396651 - 8396717
Alignment:
Q  24 ttgacaaatagctatttattacataaaaaatgatcgttaatttataaaattatgaagcaggagtacc 90  Q
    |||||||||||||||||| ||||||||||||||||||| ||||||||||||| ||||||||||||||    
T  8396651 ttgacaaatagctatttactacataaaaaatgatcgttcatttataaaattaagaagcaggagtacc 8396717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 24 - 90
Target Start/End: Complemental strand, 31821675 - 31821609
Alignment:
Q  24 ttgacaaatagctatttattacataaaaaatgatcgttaatttataaaattatgaagcaggagtacc 90  Q
    |||||||||||||||||| ||||||||||||||||||| ||||||||||||| ||||||||||||||    
T  31821675 ttgacaaatagctatttaatacataaaaaatgatcgttcatttataaaattaagaagcaggagtacc 31821609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 27 - 97
Target Start/End: Complemental strand, 42275436 - 42275366
Alignment:
Q  27 acaaatagctatttattacataaaaaatgatcgttaatttataaaattatgaagcaggagtacccgtacac 97  Q
    ||||||| ||||||||| |||||||||||||||||||||||||||||||||||||| ||||||| ||||||    
T  42275436 acaaataactatttatttcataaaaaatgatcgttaatttataaaattatgaagcatgagtaccggtacac 42275366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 24 - 82
Target Start/End: Complemental strand, 52441181 - 52441123
Alignment:
Q  24 ttgacaaatagctatttattacataaaaaatgatcgttaatttataaaattatgaagca 82  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  52441181 ttgacaaataactatttattacataaaaaatgatcgttaatttataaaattatgaagca 52441123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 24 - 77
Target Start/End: Complemental strand, 6329352 - 6329299
Alignment:
Q  24 ttgacaaatagctatttattacataaaaaatgatcgttaatttataaaattatg 77  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6329352 ttgacaaatagctatttattacataaaaaatgatcgttaatttataaaattatg 6329299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 24 - 97
Target Start/End: Original strand, 30571311 - 30571384
Alignment:
Q  24 ttgacaaatagctatttattacataaaaaatgatcgttaatttataaaattatgaagcaggagtacccgtacac 97  Q
    ||||||||||||||||||||||||||||||| ||| | ||||||||||||||||||||| ||||||| ||||||    
T  30571311 ttgacaaatagctatttattacataaaaaattatcatcaatttataaaattatgaagcaagagtaccggtacac 30571384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 24 - 97
Target Start/End: Complemental strand, 52861401 - 52861328
Alignment:
Q  24 ttgacaaatagctatttattacataaaaaatgatcgttaatttataaaattatgaagcaggagtacccgtacac 97  Q
    |||||||||||||||||| ||||||||||||||||||| ||||||||||||| ||||||| |||||| ||||||    
T  52861401 ttgacaaatagctatttactacataaaaaatgatcgttcatttataaaattaagaagcagaagtaccggtacac 52861328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 24 - 90
Target Start/End: Complemental strand, 2249691 - 2249625
Alignment:
Q  24 ttgacaaatagctatttattacataaaaaatgatcgttaatttataaaattatgaagcaggagtacc 90  Q
    |||||||||||||||||| ||||||||||||||||||| ||||||||||||| ||| ||||||||||    
T  2249691 ttgacaaatagctatttactacataaaaaatgatcgttcatttataaaattaagaaacaggagtacc 2249625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 24 - 85
Target Start/End: Original strand, 12907561 - 12907622
Alignment:
Q  24 ttgacaaatagctatttattacataaaaaatgatcgttaatttataaaattatgaagcagga 85  Q
    ||||||||||||||||||||||||||||||| |||||| ||||||||||||| |||||||||    
T  12907561 ttgacaaatagctatttattacataaaaaattatcgttcatttataaaattaagaagcagga 12907622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 24 - 97
Target Start/End: Complemental strand, 13203040 - 13202967
Alignment:
Q  24 ttgacaaatagctatttattacataaaaaatgatcgttaatttataaaattatgaagcaggagtacccgtacac 97  Q
    |||||||||| ||||||| ||||||||||||||||||| ||||||||||||| ||| |||||||||| ||||||    
T  13203040 ttgacaaataactatttactacataaaaaatgatcgttcatttataaaattaagaaacaggagtaccggtacac 13202967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 24 - 97
Target Start/End: Complemental strand, 30320994 - 30320921
Alignment:
Q  24 ttgacaaatagctatttattacataaaaaatgatcgttaatttataaaattatgaagcaggagtacccgtacac 97  Q
    |||| |||||||||||||||||||||||||| |||||| ||||||||||||| |||||||||||| | ||||||    
T  30320994 ttgataaatagctatttattacataaaaaattatcgttcatttataaaattaagaagcaggagtatcggtacac 30320921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 27 - 90
Target Start/End: Original strand, 9587949 - 9588012
Alignment:
Q  27 acaaatagctatttattacataaaaaatgatcgttaatttataaaattatgaagcaggagtacc 90  Q
    ||||||||||||||||| ||||||| || ||| |||||||||||||||||||||||||||||||    
T  9587949 acaaatagctatttatttcataaaagataatcattaatttataaaattatgaagcaggagtacc 9588012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 29 - 76
Target Start/End: Original strand, 21073072 - 21073119
Alignment:
Q  29 aaatagctatttattacataaaaaatgatcgttaatttataaaattat 76  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  21073072 aaatagctatttattacataaaaaatgatcgttaatttataaaattat 21073119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 24 - 97
Target Start/End: Original strand, 47693504 - 47693574
Alignment:
Q  24 ttgacaaatagctatttattacataaaaaatgatcgttaatttataaaattatgaagcaggagtacccgtacac 97  Q
    |||||||||||||||||||||||   ||||| ||||||||||||||||||||||||||| ||||||| ||||||    
T  47693504 ttgacaaatagctatttattaca---aaaattatcgttaatttataaaattatgaagcaagagtaccggtacac 47693574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 24 - 90
Target Start/End: Complemental strand, 24003523 - 24003457
Alignment:
Q  24 ttgacaaatagctatttattacataaaaaatgatcgttaatttataaaattatgaagcaggagtacc 90  Q
    |||||||||||||||||| |||||||||||| ||| || ||||||||||||| ||||||||||||||    
T  24003523 ttgacaaatagctatttactacataaaaaattatcattcatttataaaattaagaagcaggagtacc 24003457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 38 - 96
Target Start/End: Original strand, 51056512 - 51056570
Alignment:
Q  38 tttattacataaaaaatgatcgttaatttataaaattatgaagcaggagtacccgtaca 96  Q
    |||||||||||||||||||||||||||||||  |||||||||||||||||||| |||||    
T  51056512 tttattacataaaaaatgatcgttaatttatttaattatgaagcaggagtaccggtaca 51056570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 24 - 97
Target Start/End: Complemental strand, 25702539 - 25702466
Alignment:
Q  24 ttgacaaatagctatttattacataaaaaatgatcgttaatttataaaattatgaagcaggagtacccgtacac 97  Q
    ||||||||||| ||||||||  | |||||||||||||| |||||||||||||||||||| ||||||| ||||||    
T  25702539 ttgacaaatagttatttattttacaaaaaatgatcgttgatttataaaattatgaagcaagagtaccggtacac 25702466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 24 - 97
Target Start/End: Complemental strand, 45622584 - 45622511
Alignment:
Q  24 ttgacaaatagctatttattacataaaaaatgatcgttaatttataaaattatgaagcaggagtacccgtacac 97  Q
    ||||||||||| |||||| || |||||||||||||||| ||||||||||||| |||| ||||||||| ||||||    
T  45622584 ttgacaaataggtatttactatataaaaaatgatcgttcatttataaaattaagaagtaggagtaccggtacac 45622511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 24 - 97
Target Start/End: Complemental strand, 52345703 - 52345630
Alignment:
Q  24 ttgacaaatagctatttattacataaaaaatgatcgttaatttataaaattatgaagcaggagtacccgtacac 97  Q
    |||| |||||| |||||||| || |||||||||||||||||||||||||||||||| || ||||||| ||||||    
T  52345703 ttgataaatagttatttatttcacaaaaaatgatcgttaatttataaaattatgaaacaagagtaccggtacac 52345630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 24 - 80
Target Start/End: Complemental strand, 7227674 - 7227618
Alignment:
Q  24 ttgacaaatagctatttattacataaaaaatgatcgttaatttataaaattatgaag 80  Q
    |||| |||||| |||||||| ||||||||||||||||||||||||||||||||||||    
T  7227674 ttgataaatagttatttatttcataaaaaatgatcgttaatttataaaattatgaag 7227618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 24 - 80
Target Start/End: Complemental strand, 17553920 - 17553864
Alignment:
Q  24 ttgacaaatagctatttattacataaaaaatgatcgttaatttataaaattatgaag 80  Q
    |||| |||||| |||||||| ||||||||||||||||||||||||||||||||||||    
T  17553920 ttgataaatagttatttatttcataaaaaatgatcgttaatttataaaattatgaag 17553864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 24 - 90
Target Start/End: Complemental strand, 14152792 - 14152725
Alignment:
Q  24 ttgacaaatagctatttattacataa-aaaatgatcgttaatttataaaattatgaagcaggagtacc 90  Q
    |||||||||||||||||||||||||| ||||| || |||||||||||||||||| ||||| |||||||    
T  14152792 ttgacaaatagctatttattacataaaaaaattattgttaatttataaaattattaagcaagagtacc 14152725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 24 - 75
Target Start/End: Complemental strand, 31075712 - 31075661
Alignment:
Q  24 ttgacaaatagctatttattacataaaaaatgatcgttaatttataaaatta 75  Q
    |||||||||||||||||| |||||||||||| ||||||||||||||||||||    
T  31075712 ttgacaaatagctatttactacataaaaaataatcgttaatttataaaatta 31075661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 24 - 75
Target Start/End: Original strand, 31084909 - 31084960
Alignment:
Q  24 ttgacaaatagctatttattacataaaaaatgatcgttaatttataaaatta 75  Q
    |||||||||||||||||| |||||||||||| ||||||||||||||||||||    
T  31084909 ttgacaaatagctatttactacataaaaaataatcgttaatttataaaatta 31084960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 24 - 75
Target Start/End: Complemental strand, 46362127 - 46362076
Alignment:
Q  24 ttgacaaatagctatttattacataaaaaatgatcgttaatttataaaatta 75  Q
    ||||||||||| |||||||| |||||||||||||||||||||||||||||||    
T  46362127 ttgacaaatagttatttatttcataaaaaatgatcgttaatttataaaatta 46362076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 33 - 79
Target Start/End: Complemental strand, 477537 - 477491
Alignment:
Q  33 agctatttattacataaaaaatgatcgttaatttataaaattatgaa 79  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||    
T  477537 agctatttatttcataaaaaatgatcgttaatttataaaattatgaa 477491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 24 - 97
Target Start/End: Original strand, 6966211 - 6966284
Alignment:
Q  24 ttgacaaatagctatttattacataaaaaatgatcgttaatttataaaattatgaagcaggagtacccgtacac 97  Q
    ||||||||||| ||||||||||||||||| ||||| || ||||||||||||| |||  ||||||||| ||||||    
T  6966211 ttgacaaatagttatttattacataaaaattgatcattcatttataaaattaagaatgaggagtaccggtacac 6966284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 24 - 97
Target Start/End: Complemental strand, 41541581 - 41541509
Alignment:
Q  24 ttgacaaatagctatttattacataaaaaatgatcgttaatttataaaattatgaagcaggagtacccgtacac 97  Q
    ||||||||||||| |||||| |||||||| |||||||||||| ||||| |||||||||| ||||||| ||||||    
T  41541581 ttgacaaatagctctttatttcataaaaa-tgatcgttaattcataaatttatgaagcaagagtaccggtacac 41541509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 24 - 90
Target Start/End: Original strand, 38718034 - 38718100
Alignment:
Q  24 ttgacaaatagctatttattacataaaaaatgatcgttaatttataaaattatgaagcaggagtacc 90  Q
    ||||||||||| |||||| |||||||||||||||| || |||||||||||||  ||| |||||||||    
T  38718034 ttgacaaatagttatttactacataaaaaatgatcattcatttataaaattaataaggaggagtacc 38718100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 24 - 90
Target Start/End: Complemental strand, 51787568 - 51787502
Alignment:
Q  24 ttgacaaatagctatttattacataaaaaatgatcgttaatttataaaattatgaagcaggagtacc 90  Q
    |||| |||||| |||||| |||||||||||||||| |||||||||||||||| || ||| |||||||    
T  51787568 ttgataaatagttatttactacataaaaaatgatcattaatttataaaattaagatgcaagagtacc 51787502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 24 - 97
Target Start/End: Original strand, 24381622 - 24381695
Alignment:
Q  24 ttgacaaatagctatttattacataaaaaatgatcgttaatttataaaattatgaagcaggagtacccgtacac 97  Q
    |||| |||| ||||||| |||| | ||||||||||||||||||||||||||||||| |  ||||||| ||||||    
T  24381622 ttgaaaaattgctatttcttacttgaaaaatgatcgttaatttataaaattatgaaacgagagtaccggtacac 24381695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 27 - 88
Target Start/End: Complemental strand, 30263683 - 30263622
Alignment:
Q  27 acaaatagctatttattacataaaaaatgatcgttaatttataaaattatgaagcaggagta 88  Q
    |||||||| |||||| |||||||||||||||| |||||||||||||||| || ||| |||||    
T  30263683 acaaatagttatttactacataaaaaatgatcattaatttataaaattaagatgcaagagta 30263622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 36 - 97
Target Start/End: Original strand, 46235146 - 46235207
Alignment:
Q  36 tatttattacataaaaaatgatcgttaatttataaaattatgaagcaggagtacccgtacac 97  Q
    |||||||| |||||||||| ||||||||||||||||||||||||| | | ||||| ||||||    
T  46235146 tatttatttcataaaaaattatcgttaatttataaaattatgaagaaagggtaccagtacac 46235207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 24 - 79
Target Start/End: Complemental strand, 6526532 - 6526477
Alignment:
Q  24 ttgacaaatagctatttattacataaaaaatgatcgttaatttataaaattatgaa 79  Q
    |||| |||||| ||||| ||||||||||||||||||||||||| | ||||||||||    
T  6526532 ttgaaaaatagttatttcttacataaaaaatgatcgttaatttgtgaaattatgaa 6526477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 24 - 97
Target Start/End: Complemental strand, 10348128 - 10348058
Alignment:
Q  24 ttgacaaatagctatttattacataaaaaatgatcgttaatttataaaattatgaagcaggagtacccgtacac 97  Q
    |||| ||||||||||||| || ||||||||||||||   ||||||||||||| |||||||||||| | ||||||    
T  10348128 ttgataaatagctatttactatataaaaaatgatcg---atttataaaattaagaagcaggagtatcggtacac 10348058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 36 - 97
Target Start/End: Original strand, 21883125 - 21883187
Alignment:
Q  36 tatttattacataaaaaa-tgatcgttaatttataaaattatgaagcaggagtacccgtacac 97  Q
    |||||||| ||||||||| | ||||||||||||||||||||||||| | ||||||| ||||||    
T  21883125 tatttatttcataaaaaaataatcgttaatttataaaattatgaagtaagagtaccggtacac 21883187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 50 - 96
Target Start/End: Original strand, 46918710 - 46918756
Alignment:
Q  50 aaaatgatcgttaatttataaaattatgaagcaggagtacccgtaca 96  Q
    |||||||||||||||||||||| |||||||||| ||||||| |||||    
T  46918710 aaaatgatcgttaatttataaatttatgaagcaagagtaccggtaca 46918756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 39 - 89
Target Start/End: Original strand, 21073116 - 21073170
Alignment:
Q  39 ttattacataaaaaatgatcgttaatt----tataaaattatgaagcaggagtac 89  Q
    ||||||||||||||| |||||||||||    ||||||||||||||||||||||||    
T  21073116 ttattacataaaaaacgatcgttaattattttataaaattatgaagcaggagtac 21073170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 24 - 80
Target Start/End: Complemental strand, 32912314 - 32912260
Alignment:
Q  24 ttgacaaatagctatttattacataaaaaatgatcgttaatttataaaattatgaag 80  Q
    |||||||||||||||||||| | |||||  |||||||||||||||||| ||||||||    
T  32912314 ttgacaaatagctatttatttcttaaaa--tgatcgttaatttataaatttatgaag 32912260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 24 - 76
Target Start/End: Original strand, 33986176 - 33986226
Alignment:
Q  24 ttgacaaatagctatttattacataaaaaatgatcgttaatttataaaattat 76  Q
    |||||||||||||||||||| |||  |||||||||||||||||||||| ||||    
T  33986176 ttgacaaatagctatttatttcat--aaaatgatcgttaatttataaatttat 33986226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 27 - 89
Target Start/End: Original strand, 28624783 - 28624845
Alignment:
Q  27 acaaatagctatttattacataaaaaatgatcgttaatttataaaattatgaagcaggagtac 89  Q
    |||||||||||||||||||| ||||||  ||| || |||||||||||||| ||| | ||||||    
T  28624783 acaaatagctatttattacacaaaaaagaatcttttatttataaaattataaaggaagagtac 28624845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 97
Target Start/End: Complemental strand, 49982559 - 49982488
Alignment:
Q  24 ttgacaaatagctatttattacataaaaaatgatcgttaatttataaaattatgaagcaggagtacccgtacac 97  Q
    |||||||||||||| ||||| |||||||  |||| ||||||||||||| ||||  |||||||||| | ||||||    
T  49982559 ttgacaaatagctacttatttcataaaa--tgattgttaatttataaatttatatagcaggagtatcggtacac 49982488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 90
Target Start/End: Original strand, 17525742 - 17525805
Alignment:
Q  26 gacaaatagctatttattacataaaaaatgatcgttaatttataaaattatgaagcaggagtacc 90  Q
    |||||||| ||||||||| |||||||  |||| |||||| |||||| ||| ||||||||||||||    
T  17525742 gacaaataactatttatttcataaaat-tgattgttaatgtataaatttaggaagcaggagtacc 17525805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 70; Significance: 1e-31; HSPs: 62)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 24 - 97
Target Start/End: Complemental strand, 1129233 - 1129160
Alignment:
Q  24 ttgacaaatagctatttattacataaaaaatgatcgttaatttataaaattatgaagcaggagtacccgtacac 97  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  1129233 ttgacaaatagctatttattacataaaaaatgatcgttaatttataaaattatgaagcaggagtaccggtacac 1129160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 24 - 90
Target Start/End: Complemental strand, 26457057 - 26456991
Alignment:
Q  24 ttgacaaatagctatttattacataaaaaatgatcgttaatttataaaattatgaagcaggagtacc 90  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26457057 ttgacaaatagctatttattacataaaaaatgatcgttaatttataaaattatgaagcaggagtacc 26456991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 24 - 97
Target Start/End: Original strand, 7862747 - 7862820
Alignment:
Q  24 ttgacaaatagctatttattacataaaaaatgatcgttaatttataaaattatgaagcaggagtacccgtacac 97  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||    
T  7862747 ttgacaaatagctatttattacataaaaaattatcgttaatttataaaattatgaagcaggagtaccggtacac 7862820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 29 - 97
Target Start/End: Original strand, 40478065 - 40478133
Alignment:
Q  29 aaatagctatttattacataaaaaatgatcgttaatttataaaattatgaagcaggagtacccgtacac 97  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  40478065 aaatagctatttattacataaaaaatgatcgttaatttataaaattatgaagcaggagtaccggtacac 40478133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 22 - 97
Target Start/End: Original strand, 51344673 - 51344747
Alignment:
Q  22 ttttgacaaatagctatttattacataaaaaatgatcgttaatttataaaattatgaagcaggagtacccgtacac 97  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||    
T  51344673 ttttgacaaatagctatttattacataaaaaatgatcgttaa-ttataaaattatgaagcaggagtaccggtacac 51344747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 24 - 97
Target Start/End: Complemental strand, 44379518 - 44379445
Alignment:
Q  24 ttgacaaatagctatttattacataaaaaatgatcgttaatttataaaattatgaagcaggagtacccgtacac 97  Q
    ||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||    
T  44379518 ttgacaaatagttatttattacataaaaaatggtcgttaatttataaaattatgaagcaggagtaccggtacac 44379445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 29 - 97
Target Start/End: Complemental strand, 45538744 - 45538676
Alignment:
Q  29 aaatagctatttattacataaaaaatgatcgttaatttataaaattatgaagcaggagtacccgtacac 97  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||    
T  45538744 aaatagctatttattacataaaaaatgatcgttaatttataaaattatgaaacaggagtaccggtacac 45538676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 24 - 97
Target Start/End: Complemental strand, 14653886 - 14653813
Alignment:
Q  24 ttgacaaatagctatttattacataaaaaatgatcgttaatttataaaattatgaagcaggagtacccgtacac 97  Q
    ||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||| ||||||| ||||||    
T  14653886 ttgacaaatagctatttattacataaaaaattatcgttaatttctaaaattatgaagcaagagtaccggtacac 14653813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 24 - 97
Target Start/End: Original strand, 23456760 - 23456833
Alignment:
Q  24 ttgacaaatagctatttattacataaaaaatgatcgttaatttataaaattatgaagcaggagtacccgtacac 97  Q
    |||||||| |||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||| ||||||    
T  23456760 ttgacaaagagctatttattacataaaaaattatcgttaatttataaaattatgaagaaggagtaccggtacac 23456833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 24 - 97
Target Start/End: Original strand, 47746131 - 47746204
Alignment:
Q  24 ttgacaaatagctatttattacataaaaaatgatcgttaatttataaaattatgaagcaggagtacccgtacac 97  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||| | ||||||    
T  47746131 ttgacaaatagctatttattacataaaaaattatcgttaatttataaaattatgaagcaagagtatcggtacac 47746204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 22 - 97
Target Start/End: Original strand, 40474136 - 40474210
Alignment:
Q  22 ttttgacaaatagctatttattacataaaaaatgatcgttaatttataaaattatgaagcaggagtacccgtacac 97  Q
    ||||||||||||| |||||||||||||||||||||||| ||| |||||||||||||||||||||||||| ||||||    
T  40474136 ttttgacaaatagttatttattacataaaaaatgatcgctaa-ttataaaattatgaagcaggagtaccggtacac 40474210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 24 - 90
Target Start/End: Complemental strand, 7352270 - 7352204
Alignment:
Q  24 ttgacaaatagctatttattacataaaaaatgatcgttaatttataaaattatgaagcaggagtacc 90  Q
    |||||||||||||||||| ||||||||||||||||||| ||||||||||||| ||||||||||||||    
T  7352270 ttgacaaatagctatttactacataaaaaatgatcgttcatttataaaattaagaagcaggagtacc 7352204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 24 - 97
Target Start/End: Original strand, 35501092 - 35501165
Alignment:
Q  24 ttgacaaatagctatttattacataaaaaatgatcgttaatttataaaattatgaagcaggagtacccgtacac 97  Q
    |||||||||||||||||| ||||||||||||||||||| ||||||| ||||| |||||||||||||| ||||||    
T  35501092 ttgacaaatagctatttactacataaaaaatgatcgtttatttatagaattaagaagcaggagtaccggtacac 35501165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 24 - 89
Target Start/End: Complemental strand, 42621952 - 42621887
Alignment:
Q  24 ttgacaaatagctatttattacataaaaaatgatcgttaatttataaaattatgaagcaggagtac 89  Q
    |||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||| ||||||    
T  42621952 ttgacaaataactatttattacataaaaaatggtcgttaatttataaaattatgaagcaagagtac 42621887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 24 - 97
Target Start/End: Complemental strand, 43745450 - 43745377
Alignment:
Q  24 ttgacaaatagctatttattacataaaaaatgatcgttaatttataaaattatgaagcaggagtacccgtacac 97  Q
    ||||||||||| |||||||||||||||||||| || |||||||||||||||||||||||| |||||| ||||||    
T  43745450 ttgacaaatagttatttattacataaaaaatggtctttaatttataaaattatgaagcagaagtaccggtacac 43745377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 24 - 89
Target Start/End: Original strand, 54788617 - 54788682
Alignment:
Q  24 ttgacaaatagctatttattacataaaaaatgatcgttaatttataaaattatgaagcaggagtac 89  Q
    |||||||| |||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||    
T  54788617 ttgacaaagagctatttattacataaaaaatgatcgttaatttattaaattataaagcaggagtac 54788682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 24 - 88
Target Start/End: Original strand, 36099467 - 36099531
Alignment:
Q  24 ttgacaaatagctatttattacataaaaaatgatcgttaatttataaaattatgaagcaggagta 88  Q
    |||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||    
T  36099467 ttgacaaagagctatttattacataaaaaatgatcgttaattcataaaattatgaagcagaagta 36099531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 24 - 95
Target Start/End: Original strand, 29491926 - 29491997
Alignment:
Q  24 ttgacaaatagctatttattacataaaaaatgatcgttaatttataaaattatgaagcaggagtacccgtac 95  Q
    ||||| ||||||||||||||| |||||||||||||||||||||||||||||||||| ||| |||||| ||||    
T  29491926 ttgaccaatagctatttattatataaaaaatgatcgttaatttataaaattatgaaacagaagtaccggtac 29491997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 27 - 90
Target Start/End: Original strand, 39678412 - 39678475
Alignment:
Q  27 acaaatagctatttattacataaaaaatgatcgttaatttataaaattatgaagcaggagtacc 90  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||| |||||| ||||||    
T  39678412 acaaatagctatttatttcataaaaaatgatcgttaatttataaaattataaagcagaagtacc 39678475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 24 - 90
Target Start/End: Original strand, 26850228 - 26850294
Alignment:
Q  24 ttgacaaatagctatttattacataaaaaatgatcgttaatttataaaattatgaagcaggagtacc 90  Q
    |||||||||||||||||| ||||||||||||||||||| ||||||||||||| |||| |||||||||    
T  26850228 ttgacaaatagctatttactacataaaaaatgatcgttcatttataaaattaagaagtaggagtacc 26850294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 29 - 83
Target Start/End: Complemental strand, 37127902 - 37127848
Alignment:
Q  29 aaatagctatttattacataaaaaatgatcgttaatttataaaattatgaagcag 83  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  37127902 aaatagttatttattacataaaaaatgatcgttaatttataaaattatgaagcag 37127848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 27 - 97
Target Start/End: Original strand, 42478990 - 42479060
Alignment:
Q  27 acaaatagctatttattacataaaaaatgatcgttaatttataaaattatgaagcaggagtacccgtacac 97  Q
    |||||||| ||||||||||||||||||| |||||||||||||||||||||||| || ||||||| ||||||    
T  42478990 acaaatagttatttattacataaaaaattatcgttaatttataaaattatgaaacaagagtaccggtacac 42479060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 24 - 97
Target Start/End: Original strand, 9507205 - 9507278
Alignment:
Q  24 ttgacaaatagctatttattacataaaaaatgatcgttaatttataaaattatgaagcaggagtacccgtacac 97  Q
    ||||||||||||||||||  |||||||||||||||||||||||||||||||| || ||| ||||||| ||||||    
T  9507205 ttgacaaatagctatttacaacataaaaaatgatcgttaatttataaaattaagatgcaagagtaccggtacac 9507278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 24 - 97
Target Start/End: Original strand, 9515180 - 9515253
Alignment:
Q  24 ttgacaaatagctatttattacataaaaaatgatcgttaatttataaaattatgaagcaggagtacccgtacac 97  Q
    ||||||||||||||||||  |||||||||||||||||||||||||||||||| || ||| ||||||| ||||||    
T  9515180 ttgacaaatagctatttacaacataaaaaatgatcgttaatttataaaattaagatgcaagagtaccggtacac 9515253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 24 - 97
Target Start/End: Complemental strand, 37520806 - 37520733
Alignment:
Q  24 ttgacaaatagctatttattacataaaaaatgatcgttaatttataaaattatgaagcaggagtacccgtacac 97  Q
    |||| |||||| |||||||| |||||||||||||||||||||||||||||||||||| | ||||||| ||||||    
T  37520806 ttgataaatagttatttatttcataaaaaatgatcgttaatttataaaattatgaagaaagagtaccggtacac 37520733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 24 - 97
Target Start/End: Complemental strand, 39987455 - 39987382
Alignment:
Q  24 ttgacaaatagctatttattacataaaaaatgatcgttaatttataaaattatgaagcaggagtacccgtacac 97  Q
    |||||||||||||||||| |||||||||||||||| || ||||||||||||| ||| |||||||||| ||||||    
T  39987455 ttgacaaatagctatttactacataaaaaatgatcattcatttataaaattaagaaacaggagtaccggtacac 39987382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 24 - 97
Target Start/End: Complemental strand, 48825503 - 48825430
Alignment:
Q  24 ttgacaaatagctatttattacataaaaaatgatcgttaatttataaaattatgaagcaggagtacccgtacac 97  Q
    |||||||||| ||||||| ||||||||||||||||||||||||||||||||| || ||| ||||||| ||||||    
T  48825503 ttgacaaataactatttactacataaaaaatgatcgttaatttataaaattaagatgcaagagtaccggtacac 48825430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 24 - 97
Target Start/End: Complemental strand, 53289334 - 53289261
Alignment:
Q  24 ttgacaaatagctatttattacataaaaaatgatcgttaatttataaaattatgaagcaggagtacccgtacac 97  Q
    ||||||||||| |||||| ||||| ||||||||||||| ||||||||||||| |||||||||||||| ||||||    
T  53289334 ttgacaaatagttatttactacatcaaaaatgatcgttcatttataaaattaagaagcaggagtaccggtacac 53289261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 36 - 96
Target Start/End: Original strand, 25834544 - 25834604
Alignment:
Q  36 tatttattacataaaaaatgatcgttaatttataaaattatgaagcaggagtacccgtaca 96  Q
    |||||||||||||||||||||||||||||||||  |||||||||||||||||||| |||||    
T  25834544 tatttattacataaaaaatgatcgttaatttatttaattatgaagcaggagtaccggtaca 25834604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 22 - 78
Target Start/End: Complemental strand, 41282636 - 41282580
Alignment:
Q  22 ttttgacaaatagctatttattacataaaaaatgatcgttaatttataaaattatga 78  Q
    |||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||    
T  41282636 ttttgacaaataactatttattacataaaaaatgattgttaatttataaaattatga 41282580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 24 - 79
Target Start/End: Complemental strand, 39252994 - 39252939
Alignment:
Q  24 ttgacaaatagctatttattacataaaaaatgatcgttaatttataaaattatgaa 79  Q
    ||||||||||||||||||||||||||||||| || |||||||||||||||||||||    
T  39252994 ttgacaaatagctatttattacataaaaaataattgttaatttataaaattatgaa 39252939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 24 - 90
Target Start/End: Original strand, 30349306 - 30349372
Alignment:
Q  24 ttgacaaatagctatttattacataaaaaatgatcgttaatttataaaattatgaagcaggagtacc 90  Q
    |||| |||||||||||||||||||||||||| |||||| ||||||||||||| ||||||| ||||||    
T  30349306 ttgataaatagctatttattacataaaaaattatcgttcatttataaaattaagaagcagaagtacc 30349372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 24 - 82
Target Start/End: Original strand, 36220708 - 36220766
Alignment:
Q  24 ttgacaaatagctatttattacataaaaaatgatcgttaatttataaaattatgaagca 82  Q
    ||||||||||| ||||||||||||||||||| || ||||||||||||||||||||||||    
T  36220708 ttgacaaatagatatttattacataaaaaataattgttaatttataaaattatgaagca 36220766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 24 - 78
Target Start/End: Complemental strand, 40784629 - 40784575
Alignment:
Q  24 ttgacaaatagctatttattacataaaaaatgatcgttaatttataaaattatga 78  Q
    |||||||||| ||||||||||||||||||||||||||||| ||||||||||||||    
T  40784629 ttgacaaataactatttattacataaaaaatgatcgttaacttataaaattatga 40784575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 24 - 89
Target Start/End: Complemental strand, 29388799 - 29388734
Alignment:
Q  24 ttgacaaatagctatttattacataaaaaatgatcgttaatttataaaattatgaagcaggagtac 89  Q
    |||||||||||||||||| |||||||||||||||| || ||||||||||||| |||| ||||||||    
T  29388799 ttgacaaatagctatttaatacataaaaaatgatctttcatttataaaattaagaagtaggagtac 29388734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 24 - 97
Target Start/End: Original strand, 34825570 - 34825643
Alignment:
Q  24 ttgacaaatagctatttattacataaaaaatgatcgttaatttataaaattatgaagcaggagtacccgtacac 97  Q
    |||||||||||||||||| |||||||||||| || ||| ||||||||||||| ||||||| |||||| ||||||    
T  34825570 ttgacaaatagctatttactacataaaaaattattgtttatttataaaattaagaagcagaagtaccggtacac 34825643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 24 - 97
Target Start/End: Original strand, 54428797 - 54428870
Alignment:
Q  24 ttgacaaatagctatttattacataaaaaatgatcgttaatttataaaattatgaagcaggagtacccgtacac 97  Q
    |||||||||||||||||| |||||||||||| |||||| ||||||||||||| ||| |||||||| | ||||||    
T  54428797 ttgacaaatagctatttactacataaaaaattatcgttcatttataaaattaagaaacaggagtatcggtacac 54428870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 24 - 80
Target Start/End: Complemental strand, 10279109 - 10279053
Alignment:
Q  24 ttgacaaatagctatttattacataaaaaatgatcgttaatttataaaattatgaag 80  Q
    |||||| ||| |||||||||||||||||||| |||||||||||||||||||||||||    
T  10279109 ttgacagataactatttattacataaaaaataatcgttaatttataaaattatgaag 10279053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 24 - 88
Target Start/End: Original strand, 24170234 - 24170297
Alignment:
Q  24 ttgacaaatagctatttattacataaaaaatgatcgttaatttataaaattatgaagcaggagta 88  Q
    |||||||| |||||||||||||||||||| | ||| |||||||||||||||||||||||||||||    
T  24170234 ttgacaaaaagctatttattacataaaaa-taatccttaatttataaaattatgaagcaggagta 24170297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 24 - 88
Target Start/End: Complemental strand, 26012301 - 26012237
Alignment:
Q  24 ttgacaaatagctatttattacataaaaaatgatcgttaatttataaaattatgaagcaggagta 88  Q
    |||||||||| ||||||| |||||||||||| |||||| ||||||||||||| ||||||||||||    
T  26012301 ttgacaaataactatttactacataaaaaataatcgttcatttataaaattaagaagcaggagta 26012237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 29 - 97
Target Start/End: Original strand, 35137747 - 35137815
Alignment:
Q  29 aaatagctatttattacataaaaaatgatcgttaatttataaaattatgaagcaggagtacccgtacac 97  Q
    |||||| ||||||||||||||||||| |||||| ||||||||||||| |||||||||||| | ||||||    
T  35137747 aaatagttatttattacataaaaaattatcgttcatttataaaattaagaagcaggagtatcggtacac 35137815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 24 - 90
Target Start/End: Original strand, 41982287 - 41982353
Alignment:
Q  24 ttgacaaatagctatttattacataaaaaatgatcgttaatttataaaattatgaagcaggagtacc 90  Q
    |||||||||| |||||||||||||||||||| ||||| ||||||||||||||| ||| | |||||||    
T  41982287 ttgacaaataactatttattacataaaaaattatcgtcaatttataaaattataaagtaagagtacc 41982353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 24 - 97
Target Start/End: Complemental strand, 4817179 - 4817107
Alignment:
Q  24 ttgacaaatagctatttattacataaaaaatgatcgttaatttataaaattatgaagcaggagtacccgtacac 97  Q
    |||| ||||| |||||||||||||||||| ||||||||||||||||||||||| ||| | ||||||| ||||||    
T  4817179 ttgataaataactatttattacataaaaa-tgatcgttaatttataaaattataaagtaagagtaccggtacac 4817107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 24 - 97
Target Start/End: Original strand, 15997123 - 15997196
Alignment:
Q  24 ttgacaaatagctatttattacataaaaaatgatcgttaatttataaaattatgaagcaggagtacccgtacac 97  Q
    |||||||||||||||||| || ||||||||| |||||||||||||||||||| || ||  ||||||| ||||||    
T  15997123 ttgacaaatagctatttactatataaaaaataatcgttaatttataaaattaagatgcgagagtaccggtacac 15997196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 24 - 97
Target Start/End: Complemental strand, 25482355 - 25482282
Alignment:
Q  24 ttgacaaatagctatttattacataaaaaatgatcgttaatttataaaattatgaagcaggagtacccgtacac 97  Q
    ||||||||||| |||||| |||||||||||||||| |||||||||||||||| || ||| || |||| ||||||    
T  25482355 ttgacaaatagttatttactacataaaaaatgatcattaatttataaaattaagatgcaagaataccggtacac 25482282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 24 - 97
Target Start/End: Complemental strand, 26885077 - 26885004
Alignment:
Q  24 ttgacaaatagctatttattacataaaaaatgatcgttaatttataaaattatgaagcaggagtacccgtacac 97  Q
    |||||||||| ||||||| |||||||||||| |||||||||||||||||||| || | | ||||||| ||||||    
T  26885077 ttgacaaataactatttactacataaaaaataatcgttaatttataaaattaagatgtaagagtaccggtacac 26885004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 24 - 97
Target Start/End: Original strand, 44522293 - 44522366
Alignment:
Q  24 ttgacaaatagctatttattacataaaaaatgatcgttaatttataaaattatgaagcaggagtacccgtacac 97  Q
    |||| |||||| |||||||| ||||||||||||||||||| |||||||||||||||| | ||||| | ||||||    
T  44522293 ttgataaatagttatttatttcataaaaaatgatcgttaaattataaaattatgaagaaagagtatcggtacac 44522366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 24 - 88
Target Start/End: Original strand, 41217357 - 41217421
Alignment:
Q  24 ttgacaaatagctatttattacataaaaaatgatcgttaatttataaaattatgaagcaggagta 88  Q
    |||||||||||  ||||| |||||||||||||||| || ||||||||||||| ||||||||||||    
T  41217357 ttgacaaatagtcatttactacataaaaaatgatcattcatttataaaattaagaagcaggagta 41217421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 33 - 97
Target Start/End: Original strand, 44653482 - 44653546
Alignment:
Q  33 agctatttattacataaaaaatgatcgttaatttataaaattatgaagcaggagtacccgtacac 97  Q
    ||||||||||| |||||||||| ||||||||||||||||||||||||  | ||||||| ||||||    
T  44653482 agctatttatttcataaaaaataatcgttaatttataaaattatgaaaaaagagtaccggtacac 44653546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 24 - 90
Target Start/End: Original strand, 1021278 - 1021342
Alignment:
Q  24 ttgacaaatagctatttattacataaaaaatgatcgttaatttataaaattatgaagcaggagtacc 90  Q
    |||||||||| |||||||   ||||||||||||||||| ||||||||||||| ||||||||||||||    
T  1021278 ttgacaaatatctatttac--cataaaaaatgatcgttcatttataaaattaggaagcaggagtacc 1021342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 27 - 90
Target Start/End: Complemental strand, 13756407 - 13756344
Alignment:
Q  27 acaaatagctatttattacataaaaaatgatcgttaatttataaaattatgaagcaggagtacc 90  Q
    |||||||| |||||| ||||||||||||||||||| ||||||||||||| |||  |||||||||    
T  13756407 acaaatagttatttactacataaaaaatgatcgttcatttataaaattaagaataaggagtacc 13756344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 24 - 75
Target Start/End: Complemental strand, 46507464 - 46507413
Alignment:
Q  24 ttgacaaatagctatttattacataaaaaatgatcgttaatttataaaatta 75  Q
    ||||||||||| |||||| ||||||||||||||||||| |||||||||||||    
T  46507464 ttgacaaatagttatttactacataaaaaatgatcgttcatttataaaatta 46507413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 24 - 90
Target Start/End: Original strand, 40021382 - 40021448
Alignment:
Q  24 ttgacaaatagctatttattacataaaaaatgatcgttaatttataaaattatgaagcaggagtacc 90  Q
    |||| |||||||||||| |||||| |||||||||||||||||| |||||| |||||||  |||||||    
T  40021382 ttgaaaaatagctatttcttacatgaaaaatgatcgttaatttgtaaaatcatgaagcgagagtacc 40021448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 24 - 73
Target Start/End: Original strand, 33006601 - 33006650
Alignment:
Q  24 ttgacaaatagctatttattacataaaaaatgatcgttaatttataaaat 73  Q
    |||| ||| |||||||||||||||||||||| ||||||||||||||||||    
T  33006601 ttgataaagagctatttattacataaaaaattatcgttaatttataaaat 33006650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 36 - 97
Target Start/End: Complemental strand, 35389383 - 35389322
Alignment:
Q  36 tatttattacataaaaaatgatcgttaatttataaaattatgaagcaggagtacccgtacac 97  Q
    |||||||| ||||||||| |||||||||||||||||||||||||| | ||||| | ||||||    
T  35389383 tatttatttcataaaaaacgatcgttaatttataaaattatgaagaaagagtatcggtacac 35389322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 24 - 80
Target Start/End: Complemental strand, 51756197 - 51756141
Alignment:
Q  24 ttgacaaatagctatttattacataaaaaatgatcgttaatttataaaattatgaag 80  Q
    |||| ||||| | |||| |||||| ||||||||||||||||||||||||||||||||    
T  51756197 ttgaaaaataacaatttcttacatgaaaaatgatcgttaatttataaaattatgaag 51756141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 26 - 97
Target Start/End: Original strand, 19914339 - 19914409
Alignment:
Q  26 gacaaatagctatttattacataaaaaatgatcgttaatttataaaattatgaagcaggagtacccgtacac 97  Q
    |||||||| ||||||||| |||||||  |||||||||||||||| | |||||||||| ||||||| ||||||    
T  19914339 gacaaataactatttatttcataaaat-tgatcgttaatttatagatttatgaagcaagagtaccggtacac 19914409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 24 - 79
Target Start/End: Original strand, 32636929 - 32636984
Alignment:
Q  24 ttgacaaatagctatttattacataaaaaatgatcgttaatttataaaattatgaa 79  Q
    |||| |||||| ||||| ||||||||||||||||||||||||| | ||||||||||    
T  32636929 ttgaaaaatagttatttcttacataaaaaatgatcgttaatttgtgaaattatgaa 32636984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 27 - 82
Target Start/End: Original strand, 50258106 - 50258161
Alignment:
Q  27 acaaatagctatttattacataaaaaatgatcgttaatttataaaattatgaagca 82  Q
    |||||||| |||||| ||||||||||||||||||| ||| ||||||||| ||||||    
T  50258106 acaaatagttatttactacataaaaaatgatcgttcattcataaaattaagaagca 50258161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 26 - 97
Target Start/End: Original strand, 9252158 - 9252228
Alignment:
Q  26 gacaaatagctatttattacataaaaaatgatcgttaatttataaaattatgaagcaggagtacccgtacac 97  Q
    |||||||| ||||||||| |||||||  |||||||||||||||| |  ||||||||| ||||||| ||||||    
T  9252158 gacaaataactatttatttcataaaat-tgatcgttaatttatagatatatgaagcaagagtaccggtacac 9252228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 51 - 90
Target Start/End: Original strand, 27045023 - 27045062
Alignment:
Q  51 aaatgatcgttaatttataaaattatgaagcaggagtacc 90  Q
    ||||||||||||||||||||||||||| || |||||||||    
T  27045023 aaatgatcgttaatttataaaattatgtagaaggagtacc 27045062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 46 - 75
Target Start/End: Complemental strand, 51350728 - 51350699
Alignment:
Q  46 ataaaaaatgatcgttaatttataaaatta 75  Q
    ||||||||||||||||||||||||||||||    
T  51350728 ataaaaaatgatcgttaatttataaaatta 51350699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0667 (Bit Score: 66; Significance: 2e-29; HSPs: 1)
Name: scaffold0667
Description:

Target: scaffold0667; HSP #1
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 24 - 97
Target Start/End: Original strand, 135 - 208
Alignment:
Q  24 ttgacaaatagctatttattacataaaaaatgatcgttaatttataaaattatgaagcaggagtacccgtacac 97  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||    
T  135 ttgacaaatagctatttattacataaaaaatgatcgttaatttataaaattatgaagcagaagtaccggtacac 208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 66; Significance: 2e-29; HSPs: 38)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 24 - 97
Target Start/End: Original strand, 2261316 - 2261389
Alignment:
Q  24 ttgacaaatagctatttattacataaaaaatgatcgttaatttataaaattatgaagcaggagtacccgtacac 97  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||    
T  2261316 ttgacaaatagctatttattacataaaaaatgatcgttaatttacaaaattatgaagcaggagtaccggtacac 2261389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 24 - 97
Target Start/End: Complemental strand, 29454247 - 29454174
Alignment:
Q  24 ttgacaaatagctatttattacataaaaaatgatcgttaatttataaaattatgaagcaggagtacccgtacac 97  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  29454247 ttgacaaatagttatttattacataaaaaatgatcgttaatttataaaattatgaagcaggagtaccggtacac 29454174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 24 - 88
Target Start/End: Complemental strand, 40776741 - 40776677
Alignment:
Q  24 ttgacaaatagctatttattacataaaaaatgatcgttaatttataaaattatgaagcaggagta 88  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  40776741 ttgacaaatagctatttattccataaaaaatgatcgttaatttataaaattatgaagcaggagta 40776677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 24 - 97
Target Start/End: Original strand, 118112 - 118185
Alignment:
Q  24 ttgacaaatagctatttattacataaaaaatgatcgttaatttataaaattatgaagcaggagtacccgtacac 97  Q
    |||||||||||||||||| ||||||||||||||||||| ||||||| ||||| |||||||||||||| ||||||    
T  118112 ttgacaaatagctatttactacataaaaaatgatcgttcatttatagaattaagaagcaggagtaccggtacac 118185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 22 - 97
Target Start/End: Complemental strand, 45452491 - 45452417
Alignment:
Q  22 ttttgacaaatagctatttattacataaaaaatgatcgttaatttataaaattatgaagcaggagtacccgtacac 97  Q
    |||||||||||||||| ||||||||||||||||||||| ||| ||||||||||| |||||||||||||| ||||||    
T  45452491 ttttgacaaatagctacttattacataaaaaatgatcgataa-ttataaaattaagaagcaggagtaccggtacac 45452417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 24 - 90
Target Start/End: Original strand, 1043362 - 1043428
Alignment:
Q  24 ttgacaaatagctatttattacataaaaaatgatcgttaatttataaaattatgaagcaggagtacc 90  Q
    |||| ||||| |||||||||||||||||||||||||||||| |||||||||||||||||||| ||||    
T  1043362 ttgaaaaataactatttattacataaaaaatgatcgttaatatataaaattatgaagcaggaatacc 1043428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 24 - 90
Target Start/End: Original strand, 40578998 - 40579064
Alignment:
Q  24 ttgacaaatagctatttattacataaaaaatgatcgttaatttataaaattatgaagcaggagtacc 90  Q
    |||||||||||||||||| ||||||||||||||||||| ||||||||||||| ||||||| ||||||    
T  40578998 ttgacaaatagctatttactacataaaaaatgatcgttcatttataaaattaagaagcagaagtacc 40579064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 24 - 97
Target Start/End: Complemental strand, 10706659 - 10706586
Alignment:
Q  24 ttgacaaatagctatttattacataaaaaatgatcgttaatttataaaattatgaagcaggagtacccgtacac 97  Q
    |||| |||||| |||||||| || ||||||||||||||||||||||||||||||||||| ||||||| ||||||    
T  10706659 ttgataaatagttatttatttcacaaaaaatgatcgttaatttataaaattatgaagcaagagtaccagtacac 10706586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 24 - 97
Target Start/End: Complemental strand, 29265693 - 29265620
Alignment:
Q  24 ttgacaaatagctatttattacataaaaaatgatcgttaatttataaaattatgaagcaggagtacccgtacac 97  Q
    |||| |||||| |||||||| ||||||||||||||||||||||||||||||||||| || ||||||| ||||||    
T  29265693 ttgataaatagttatttatttcataaaaaatgatcgttaatttataaaattatgaaacaagagtaccggtacac 29265620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 24 - 97
Target Start/End: Complemental strand, 37676041 - 37675968
Alignment:
Q  24 ttgacaaatagctatttattacataaaaaatgatcgttaatttataaaattatgaagcaggagtacccgtacac 97  Q
    |||||||||||||||||| ||||||||||||||||||| ||||||| ||||| |||| ||||||||| ||||||    
T  37676041 ttgacaaatagctatttaatacataaaaaatgatcgttcatttatataattaagaagtaggagtaccggtacac 37675968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 24 - 89
Target Start/End: Complemental strand, 26988491 - 26988426
Alignment:
Q  24 ttgacaaatagctatttattacataaaaaatgatcgttaatttataaaattatgaagcaggagtac 89  Q
    |||||||||| ||||||| ||||||||||||||||||||||||||||||||| || ||| ||||||    
T  26988491 ttgacaaataactatttactacataaaaaatgatcgttaatttataaaattaagatgcaagagtac 26988426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 24 - 97
Target Start/End: Original strand, 38210622 - 38210695
Alignment:
Q  24 ttgacaaatagctatttattacataaaaaatgatcgttaatttataaaattatgaagcaggagtacccgtacac 97  Q
    |||| |||||| ||||||||||||||||||| |||||| ||||||||||||| |||||||||||| | ||||||    
T  38210622 ttgataaatagttatttattacataaaaaattatcgttcatttataaaattaagaagcaggagtatcggtacac 38210695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 24 - 97
Target Start/End: Complemental strand, 39300187 - 39300114
Alignment:
Q  24 ttgacaaatagctatttattacataaaaaatgatcgttaatttataaaattatgaagcaggagtacccgtacac 97  Q
    |||| |||||| |||||||| || ||||||||||| ||||||||||||||||||||||| ||||||| ||||||    
T  39300187 ttgataaatagttatttatttcacaaaaaatgatcattaatttataaaattatgaagcaagagtaccggtacac 39300114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 24 - 97
Target Start/End: Complemental strand, 39646741 - 39646668
Alignment:
Q  24 ttgacaaatagctatttattacataaaaaatgatcgttaatttataaaattatgaagcaggagtacccgtacac 97  Q
    ||||||||||| || ||||||||||||||| ||||||| ||||||||||||| |||| ||||||||| ||||||    
T  39646741 ttgacaaatagttaattattacataaaaaacgatcgttcatttataaaattaagaagtaggagtaccggtacac 39646668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 24 - 90
Target Start/End: Complemental strand, 34166014 - 34165947
Alignment:
Q  24 ttgacaaatagctatttattacataaaaaatgatcgtt-aatttataaaattatgaagcaggagtacc 90  Q
    |||| |||||| |||||||| ||||||||||||||||| ||||||||||||||||||||| |||||||    
T  34166014 ttgataaatagttatttatttcataaaaaatgatcgttaaatttataaaattatgaagcaagagtacc 34165947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 33 - 96
Target Start/End: Original strand, 34634165 - 34634228
Alignment:
Q  33 agctatttattacataaaaaatgatcgttaatttataaaattatgaagcaggagtacccgtaca 96  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||  | ||||||| |||||    
T  34634165 agctatttatttcataaaaaatgatcgttaatttataaaattatgaaaaaagagtaccggtaca 34634228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 24 - 82
Target Start/End: Complemental strand, 6982889 - 6982831
Alignment:
Q  24 ttgacaaatagctatttattacataaaaaatgatcgttaatttataaaattatgaagca 82  Q
    |||||||||| ||||||| ||||||||||||||||||| ||||||||||||| ||||||    
T  6982889 ttgacaaataactatttactacataaaaaatgatcgttcatttataaaattaagaagca 6982831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 27 - 97
Target Start/End: Complemental strand, 7128191 - 7128121
Alignment:
Q  27 acaaatagctatttattacataaaaaatgatcgttaatttataaaattatgaagcaggagtacccgtacac 97  Q
    ||||||||||||||| |||||||||||| |||||| ||||||| ||||| |||||||||||| | ||||||    
T  7128191 acaaatagctatttactacataaaaaattatcgttcatttatagaattaagaagcaggagtatcggtacac 7128121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 24 - 90
Target Start/End: Original strand, 9497841 - 9497907
Alignment:
Q  24 ttgacaaatagctatttattacataaaaaatgatcgttaatttataaaattatgaagcaggagtacc 90  Q
    ||||||||||||||||||  ||||||||||||||| |||||||||||||||| || ||| |||||||    
T  9497841 ttgacaaatagctatttacaacataaaaaatgatcattaatttataaaattaagatgcaagagtacc 9497907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 24 - 82
Target Start/End: Original strand, 36667538 - 36667596
Alignment:
Q  24 ttgacaaatagctatttattacataaaaaatgatcgttaatttataaaattatgaagca 82  Q
    |||||||||||||||||| |||||||||||| |||||| ||||||||||||| ||||||    
T  36667538 ttgacaaatagctatttactacataaaaaataatcgttcatttataaaattaagaagca 36667596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 24 - 90
Target Start/End: Complemental strand, 44000665 - 44000599
Alignment:
Q  24 ttgacaaatagctatttattacataaaaaatgatcgttaatttataaaattatgaagcaggagtacc 90  Q
    |||| |||||| |||||||| |||||||||| ||||||||||||||||||||||||| | |||||||    
T  44000665 ttgataaatagttatttatttcataaaaaataatcgttaatttataaaattatgaagaaagagtacc 44000599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 24 - 97
Target Start/End: Complemental strand, 15451525 - 15451452
Alignment:
Q  24 ttgacaaatagctatttattacataaaaaatgatcgttaatttataaaattatgaagcaggagtacccgtacac 97  Q
    ||||||||||| |||||| || | |||||||||||||||||||||||||||| || ||| ||||||| ||||||    
T  15451525 ttgacaaatagttatttactataaaaaaaatgatcgttaatttataaaattaagatgcaagagtaccggtacac 15451452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 24 - 89
Target Start/End: Complemental strand, 26522070 - 26522005
Alignment:
Q  24 ttgacaaatagctatttattacataaaaaatgatcgttaatttataaaattatgaagcaggagtac 89  Q
    |||||||||||||||||| ||||||||| || || ||| ||||||||||||| |||||||||||||    
T  26522070 ttgacaaatagctatttactacataaaatattattgttcatttataaaattaagaagcaggagtac 26522005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 24 - 97
Target Start/End: Original strand, 36162495 - 36162568
Alignment:
Q  24 ttgacaaatagctatttattacataaaaaatgatcgttaatttataaaattatgaagcaggagtacccgtacac 97  Q
    |||| |||||| |||||||| || ||||||||||||||||||||||||||||||||  | ||||||| ||||||    
T  36162495 ttgataaatagttatttatttcacaaaaaatgatcgttaatttataaaattatgaaataagagtaccggtacac 36162568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 24 - 80
Target Start/End: Original strand, 40267785 - 40267841
Alignment:
Q  24 ttgacaaatagctatttattacataaaaaatgatcgttaatttataaaattatgaag 80  Q
    |||||||||||||||||| ||||||||||||| ||||| ||||||||||||| ||||    
T  40267785 ttgacaaatagctatttactacataaaaaatggtcgttcatttataaaattaagaag 40267841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 24 - 75
Target Start/End: Complemental strand, 6631013 - 6630962
Alignment:
Q  24 ttgacaaatagctatttattacataaaaaatgatcgttaatttataaaatta 75  Q
    |||||||||||||||||| |||||||||||||||  ||||||||||||||||    
T  6631013 ttgacaaatagctatttactacataaaaaatgattattaatttataaaatta 6630962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 24 - 75
Target Start/End: Original strand, 41720551 - 41720602
Alignment:
Q  24 ttgacaaatagctatttattacataaaaaatgatcgttaatttataaaatta 75  Q
    |||||||||||||||||| | ||||||||||||||||| |||||||||||||    
T  41720551 ttgacaaatagctatttactgcataaaaaatgatcgttcatttataaaatta 41720602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 36 - 90
Target Start/End: Original strand, 5328915 - 5328969
Alignment:
Q  36 tatttattacataaaaaatgatcgttaatttataaaattatgaagcaggagtacc 90  Q
    |||||| |||||||||||||||| || ||||||||||||| ||||||||||||||    
T  5328915 tatttactacataaaaaatgatcattcatttataaaattaagaagcaggagtacc 5328969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 24 - 90
Target Start/End: Complemental strand, 38329555 - 38329489
Alignment:
Q  24 ttgacaaatagctatttattacataaaaaatgatcgttaatttataaaattatgaagcaggagtacc 90  Q
    |||| |||||| ||||| |||||| |||||||||||||||||||||||||||| ||||  |||||||    
T  38329555 ttgaaaaatagttatttcttacatgaaaaatgatcgttaatttataaaattataaagcgagagtacc 38329489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 36 - 90
Target Start/End: Complemental strand, 43841935 - 43841881
Alignment:
Q  36 tatttattacataaaaaatgatcgttaatttataaaattatgaagcaggagtacc 90  Q
    ||||||||  ||||||||||||||||||||||||||||||||||| | |||||||    
T  43841935 tatttattttataaaaaatgatcgttaatttataaaattatgaagaaagagtacc 43841881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 24 - 89
Target Start/End: Original strand, 27847771 - 27847836
Alignment:
Q  24 ttgacaaatagctatttattacataaaaaatgatcgttaatttataaaattatgaagcaggagtac 89  Q
    |||| ||||||||||||| ||||||||||||||||||  ||||||||||||| ||| ||| |||||    
T  27847771 ttgataaatagctatttactacataaaaaatgatcgtccatttataaaattaagaaacagaagtac 27847836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 24 - 77
Target Start/End: Complemental strand, 2749419 - 2749366
Alignment:
Q  24 ttgacaaatagctatttattacataaaaaatgatcgttaatttataaaattatg 77  Q
    |||| |||||| ||||||||   |||||||||||||||||||||||||||||||    
T  2749419 ttgataaatagttatttattttgtaaaaaatgatcgttaatttataaaattatg 2749366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 36 - 79
Target Start/End: Original strand, 45210545 - 45210588
Alignment:
Q  36 tatttattacataaaaaatgatcgttaatttataaaattatgaa 79  Q
    |||||||| || ||||||| ||||||||||||||||||||||||    
T  45210545 tatttatttcacaaaaaataatcgttaatttataaaattatgaa 45210588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 27 - 97
Target Start/End: Original strand, 17642379 - 17642448
Alignment:
Q  27 acaaatagctatttattacataaaaaatgatcgttaatttataaaattatgaagcaggagtacccgtacac 97  Q
    |||||||||| |||||| |||||||| |||| ||||||||||||| || ||||| | ||||||| ||||||    
T  17642379 acaaatagctttttatttcataaaaa-tgatagttaatttataaatttttgaagtaagagtaccggtacac 17642448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 90
Target Start/End: Original strand, 17792509 - 17792572
Alignment:
Q  26 gacaaatagctatttattacataaaaaatgatcgttaatttataaaattatgaagcaggagtacc 90  Q
    |||||||| ||||||||| |||||||  |||| |||||| |||||| ||| ||||||||||||||    
T  17792509 gacaaataactatttatttcataaaat-tgattgttaatgtataaatttaggaagcaggagtacc 17792572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 90
Target Start/End: Complemental strand, 24937686 - 24937623
Alignment:
Q  26 gacaaatagctatttattacataaaaaatgatcgttaatttataaaattatgaagcaggagtacc 90  Q
    |||||||| ||||||||| |||||||  |||| |||||| |||||| ||| ||||||||||||||    
T  24937686 gacaaataactatttatttcataaaat-tgattgttaatgtataaatttaagaagcaggagtacc 24937623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 90
Target Start/End: Original strand, 27172219 - 27172282
Alignment:
Q  26 gacaaatagctatttattacataaaaaatgatcgttaatttataaaattatgaagcaggagtacc 90  Q
    |||||||| ||||||||| |||||||  |||| |||||| |||||| ||| ||||||||||||||    
T  27172219 gacaaataactatttatttcataaaat-tgattgttaatgtataaatttaggaagcaggagtacc 27172282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 50 - 97
Target Start/End: Original strand, 41423667 - 41423715
Alignment:
Q  50 aaaatgatcgttaatttataaaattatgaagc-aggagtacccgtacac 97  Q
    ||||||||||||||||||| || ||||||||| ||||||||| ||||||    
T  41423667 aaaatgatcgttaatttatcaatttatgaagcaaggagtaccggtacac 41423715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 63; Significance: 1e-27; HSPs: 38)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 24 - 90
Target Start/End: Original strand, 34259842 - 34259908
Alignment:
Q  24 ttgacaaatagctatttattacataaaaaatgatcgttaatttataaaattatgaagcaggagtacc 90  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34259842 ttgacaaatagttatttattacataaaaaatgatcgttaatttataaaattatgaagcaggagtacc 34259908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 24 - 90
Target Start/End: Original strand, 5360028 - 5360094
Alignment:
Q  24 ttgacaaatagctatttattacataaaaaatgatcgttaatttataaaattatgaagcaggagtacc 90  Q
    |||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  5360028 ttgacaaatagcaatttattacataaaaaattatcgttaatttataaaattatgaagcaggagtacc 5360094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 24 - 97
Target Start/End: Original strand, 3426092 - 3426165
Alignment:
Q  24 ttgacaaatagctatttattacataaaaaatgatcgttaatttataaaattatgaagcaggagtacccgtacac 97  Q
    ||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||| ||||| | ||||||    
T  3426092 ttgacaaatagttatttattacataaaaaattatcgttaatttataaaattatgaagcaagagtatcggtacac 3426165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 24 - 97
Target Start/End: Original strand, 13119102 - 13119174
Alignment:
Q  24 ttgacaaatagctatttattacataaaaaatgatcgttaatttataaaattatgaagcaggagtacccgtacac 97  Q
    |||| |||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||| ||||||    
T  13119102 ttgaaaaatagctatttattatataaaa-atgatcgttaatttataaaattatgaagcaggagtaccggtacac 13119174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 24 - 97
Target Start/End: Complemental strand, 35370502 - 35370429
Alignment:
Q  24 ttgacaaatagctatttattacataaaaaatgatcgttaatttataaaattatgaagcaggagtacccgtacac 97  Q
    |||||||||||||||||| ||||||||||||||||||| ||||||||||||| |||||| ||||||| ||||||    
T  35370502 ttgacaaatagctatttactacataaaaaatgatcgttcatttataaaattaagaagcaagagtaccggtacac 35370429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 24 - 97
Target Start/End: Original strand, 40803623 - 40803696
Alignment:
Q  24 ttgacaaatagctatttattacataaaaaatgatcgttaatttataaaattatgaagcaggagtacccgtacac 97  Q
    ||||||||||| |||||| ||||||||||||||||||| ||||||||||||| |||||||||||||| ||||||    
T  40803623 ttgacaaatagttatttactacataaaaaatgatcgttcatttataaaattaagaagcaggagtaccggtacac 40803696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 24 - 90
Target Start/End: Original strand, 2852000 - 2852066
Alignment:
Q  24 ttgacaaatagctatttattacataaaaaatgatcgttaatttataaaattatgaagcaggagtacc 90  Q
    |||||||||||||||||| ||||||||||||||||||| ||||||||||||| |||||| |||||||    
T  2852000 ttgacaaatagctatttaatacataaaaaatgatcgttcatttataaaattaagaagcatgagtacc 2852066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 24 - 97
Target Start/End: Original strand, 6260320 - 6260393
Alignment:
Q  24 ttgacaaatagctatttattacataaaaaatgatcgttaatttataaaattatgaagcaggagtacccgtacac 97  Q
    |||||||||||||||||||||||||||||| ||| ||| |||||||||||||||||| | ||||||| ||||||    
T  6260320 ttgacaaatagctatttattacataaaaaaagatagtttatttataaaattatgaaggaagagtaccggtacac 6260393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 24 - 97
Target Start/End: Complemental strand, 9604535 - 9604462
Alignment:
Q  24 ttgacaaatagctatttattacataaaaaatgatcgttaatttataaaattatgaagcaggagtacccgtacac 97  Q
    |||||||||||||||||| ||||||||||||||||||| ||||||| ||||| |||| ||||||||| ||||||    
T  9604535 ttgacaaatagctatttaatacataaaaaatgatcgttcatttatataattaagaagtaggagtaccggtacac 9604462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 24 - 97
Target Start/End: Complemental strand, 30753551 - 30753478
Alignment:
Q  24 ttgacaaatagctatttattacataaaaaatgatcgttaatttataaaattatgaagcaggagtacccgtacac 97  Q
    |||| ||||| |||||||||||||||||||||||||||||||||||||||||| ||| | ||||||| ||||||    
T  30753551 ttgataaataactatttattacataaaaaatgatcgttaatttataaaattataaagtaagagtaccggtacac 30753478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 24 - 92
Target Start/End: Original strand, 8258697 - 8258765
Alignment:
Q  24 ttgacaaatagctatttattacataaaaaatgatcgttaatttataaaattatgaagcaggagtacccg 92  Q
    |||||||||||||||||| |||||||| |||||||||| ||||||||||||| ||||||| ||||||||    
T  8258697 ttgacaaatagctatttactacataaataatgatcgttcatttataaaattaagaagcagaagtacccg 8258765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 29 - 97
Target Start/End: Complemental strand, 42486704 - 42486636
Alignment:
Q  29 aaatagctatttattacataaaaaatgatcgttaatttataaaattatgaagcaggagtacccgtacac 97  Q
    ||||| |||||||||||||||||||||||| ||||||||||||||||||||| | ||||||| ||||||    
T  42486704 aaataactatttattacataaaaaatgatctttaatttataaaattatgaagtatgagtaccggtacac 42486636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 24 - 71
Target Start/End: Original strand, 12334610 - 12334657
Alignment:
Q  24 ttgacaaatagctatttattacataaaaaatgatcgttaatttataaa 71  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  12334610 ttgacaaatagctatttattacataaaaaatgatcgttaatttataaa 12334657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 24 - 78
Target Start/End: Original strand, 702221 - 702275
Alignment:
Q  24 ttgacaaatagctatttattacataaaaaatgatcgttaatttataaaattatga 78  Q
    ||||||||||| |||||||||||||||||||||||||||| ||||||||||||||    
T  702221 ttgacaaatagttatttattacataaaaaatgatcgttaacttataaaattatga 702275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 24 - 90
Target Start/End: Complemental strand, 14434922 - 14434856
Alignment:
Q  24 ttgacaaatagctatttattacataaaaaatgatcgttaatttataaaattatgaagcaggagtacc 90  Q
    |||||||||||||||||| |||||| |||||||||||| ||||||||||||| ||| ||||||||||    
T  14434922 ttgacaaatagctatttactacatataaaatgatcgttcatttataaaattaagaaacaggagtacc 14434856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 24 - 90
Target Start/End: Original strand, 27980077 - 27980142
Alignment:
Q  24 ttgacaaatagctatttattacataaaaaatgatcgttaatttataaaattatgaagcaggagtacc 90  Q
    |||||||||||||| ||||||||||||| ||||||||||||||||||||||||||| || |||||||    
T  27980077 ttgacaaatagctaattattacataaaa-atgatcgttaatttataaaattatgaaacaagagtacc 27980142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 24 - 97
Target Start/End: Original strand, 13127283 - 13127356
Alignment:
Q  24 ttgacaaatagctatttattacataaaaaatgatcgttaatttataaaattatgaagcaggagtacccgtacac 97  Q
    |||| |||||| |||||||| |||||||||| ||||||||||||||||||||||||| | ||||||| ||||||    
T  13127283 ttgataaatagttatttatttcataaaaaattatcgttaatttataaaattatgaagaaagagtaccggtacac 13127356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 24 - 97
Target Start/End: Original strand, 29960169 - 29960242
Alignment:
Q  24 ttgacaaatagctatttattacataaaaaatgatcgttaatttataaaattatgaagcaggagtacccgtacac 97  Q
    |||| |||||| |||||||| ||||||||| |||||||||||||||||||||||||| | ||||||| ||||||    
T  29960169 ttgataaatagttatttatttcataaaaaacgatcgttaatttataaaattatgaagaaagagtaccggtacac 29960242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 24 - 83
Target Start/End: Complemental strand, 42597577 - 42597518
Alignment:
Q  24 ttgacaaatagctatttattacataaaaaatgatcgttaatttataaaattatgaagcag 83  Q
    |||||||||||||||||| |||||||||||| |||||| ||||||||||||| |||||||    
T  42597577 ttgacaaatagctatttactacataaaaaataatcgttcatttataaaattaagaagcag 42597518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 24 - 90
Target Start/End: Complemental strand, 28318451 - 28318385
Alignment:
Q  24 ttgacaaatagctatttattacataaaaaatgatcgttaatttataaaattatgaagcaggagtacc 90  Q
    |||||||||||||||||| ||| |||||||| ||| || ||||||||||||| ||||||||||||||    
T  28318451 ttgacaaatagctatttactacgtaaaaaattatcattcatttataaaattaagaagcaggagtacc 28318385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 24 - 90
Target Start/End: Original strand, 33678460 - 33678526
Alignment:
Q  24 ttgacaaatagctatttattacataaaaaatgatcgttaatttataaaattatgaagcaggagtacc 90  Q
    ||||||||||  |||||| |||||||||||||||| || ||||||||||||| ||||||||||||||    
T  33678460 ttgacaaataattatttactacataaaaaatgatcattcatttataaaattaagaagcaggagtacc 33678526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 24 - 97
Target Start/End: Complemental strand, 479778 - 479705
Alignment:
Q  24 ttgacaaatagctatttattacataaaaaatgatcgttaatttataaaattatgaagcaggagtacccgtacac 97  Q
    |||| |||||| ||||| |||||| |||||||||||||||||| ||||||||||||||  ||||||| ||||||    
T  479778 ttgaaaaatagttatttcttacatgaaaaatgatcgttaatttgtaaaattatgaagcgagagtaccagtacac 479705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 24 - 97
Target Start/End: Complemental strand, 9913292 - 9913220
Alignment:
Q  24 ttgacaaatagctatttattacataaaaaatgatcgttaatttataaaattatgaagcaggagtacccgtacac 97  Q
    ||||||||||| |||||| |||||||||| |||| ||| ||||||||||||| |||||||||||||| ||||||    
T  9913292 ttgacaaatagttatttactacataaaaa-tgatagttcatttataaaattaagaagcaggagtaccggtacac 9913220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 24 - 97
Target Start/End: Complemental strand, 36428009 - 36427936
Alignment:
Q  24 ttgacaaatagctatttattacataaaaaatgatcgttaatttataaaattatgaagcaggagtacccgtacac 97  Q
    |||| |||||| |||||||| || |||||||||||||||||||||||||||||  |||| ||||||| ||||||    
T  36428009 ttgataaatagttatttatttcacaaaaaatgatcgttaatttataaaattattgagcaagagtaccggtacac 36427936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 24 - 97
Target Start/End: Complemental strand, 40563219 - 40563146
Alignment:
Q  24 ttgacaaatagctatttattacataaaaaatgatcgttaatttataaaattatgaagcaggagtacccgtacac 97  Q
    ||||||||||  |||||||| || | ||||||||||||||||||||||||||||||||| ||||| | ||||||    
T  40563219 ttgacaaataattatttatttcacacaaaatgatcgttaatttataaaattatgaagcaagagtatcggtacac 40563146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 49 - 97
Target Start/End: Complemental strand, 39816584 - 39816536
Alignment:
Q  49 aaaaatgatcgttaatttataaaattatgaagcaggagtacccgtacac 97  Q
    |||||||||||||||||||||||||||||||||| ||||||| ||||||    
T  39816584 aaaaatgatcgttaatttataaaattatgaagcaagagtaccggtacac 39816536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 27 - 97
Target Start/End: Complemental strand, 9910140 - 9910070
Alignment:
Q  27 acaaatagctatttattacataaaaaatgatcgttaatttataaaattatgaagcaggagtacccgtacac 97  Q
    ||||||||||||||| ||||||||||||||||||| ||||||| |||||  ||| ||||||| | ||||||    
T  9910140 acaaatagctatttactacataaaaaatgatcgttcatttatagaattaaaaagaaggagtatcggtacac 9910070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 36 - 97
Target Start/End: Original strand, 33210684 - 33210745
Alignment:
Q  36 tatttattacataaaaaatgatcgttaatttataaaattatgaagcaggagtacccgtacac 97  Q
    |||||||| |||||||||| ||||||||||||||||||||||||| | | ||||| ||||||    
T  33210684 tatttatttcataaaaaattatcgttaatttataaaattatgaagaaagggtaccggtacac 33210745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 24 - 97
Target Start/End: Original strand, 38293922 - 38293995
Alignment:
Q  24 ttgacaaatagctatttattacataaaaaatgatcgttaatttataaaattatgaagcaggagtacccgtacac 97  Q
    |||| |||||| ||||| |||||| |||||||||| ||||||| ||||||||||||||  ||||||| ||||||    
T  38293922 ttgaaaaatagttatttcttacatgaaaaatgatctttaatttgtaaaattatgaagcgagagtaccggtacac 38293995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 24 - 80
Target Start/End: Complemental strand, 3024255 - 3024199
Alignment:
Q  24 ttgacaaatagctatttattacataaaaaatgatcgttaatttataaaattatgaag 80  Q
    |||| ||||| |||||||||||||||||||| |||||| ||||||||||||| ||||    
T  3024255 ttgataaataactatttattacataaaaaattatcgttcatttataaaattaagaag 3024199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 26 - 97
Target Start/End: Original strand, 17069290 - 17069360
Alignment:
Q  26 gacaaatagctatttattacataaaaaatgatcgttaatttataaaattatgaagcaggagtacccgtacac 97  Q
    |||||||| ||||||||| |||||||  ||||||||| |||||| | |||||||||||||||||| ||||||    
T  17069290 gacaaataactatttatttcataaaat-tgatcgttagtttatagatttatgaagcaggagtaccggtacac 17069360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 24 - 81
Target Start/End: Original strand, 4617001 - 4617058
Alignment:
Q  24 ttgacaaatagctatttattacataaaaaatgatcgttaatttataaaattatgaagc 81  Q
    |||| |||||| ||||| |||||| |||||||||||||||||| |||||| |||||||    
T  4617001 ttgaaaaatagttattttttacatgaaaaatgatcgttaatttgtaaaatcatgaagc 4617058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 47 - 80
Target Start/End: Original strand, 9630387 - 9630420
Alignment:
Q  47 taaaaaatgatcgttaatttataaaattatgaag 80  Q
    ||||||||||||||||||||||||||||||||||    
T  9630387 taaaaaatgatcgttaatttataaaattatgaag 9630420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 50 - 90
Target Start/End: Original strand, 35162638 - 35162678
Alignment:
Q  50 aaaatgatcgttaatttataaaattatgaagcaggagtacc 90  Q
    |||||||||||||||||||||| |||||||||| |||||||    
T  35162638 aaaatgatcgttaatttataaatttatgaagcaagagtacc 35162678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 50 - 97
Target Start/End: Original strand, 329069 - 329116
Alignment:
Q  50 aaaatgatcgttaatttataaaattatgaagcaggagtacccgtacac 97  Q
    ||||||||| |||||||||||| |||||||||||||||| | ||||||    
T  329069 aaaatgatcattaatttataaatttatgaagcaggagtatcagtacac 329116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 26 - 97
Target Start/End: Complemental strand, 2270885 - 2270815
Alignment:
Q  26 gacaaatagctatttattacataaaaaatgatcgttaatttataaaattatgaagcaggagtacccgtacac 97  Q
    ||||||||  |||||||| |||||||  |||||||||||||||| | |||||||||| ||||||| ||||||    
T  2270885 gacaaataattatttatttcataaaat-tgatcgttaatttatagatttatgaagcaagagtaccggtacac 2270815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 27 - 97
Target Start/End: Original strand, 13091219 - 13091288
Alignment:
Q  27 acaaatagctatttattacataaaaaatgatcgttaatttataaaattatgaagcaggagtacccgtacac 97  Q
    |||||||||| |||||| |||||||| |||| ||||||||||||| || ||||| | ||||||| ||||||    
T  13091219 acaaatagctttttatttcataaaaa-tgatagttaatttataaatttttgaagtaagagtaccggtacac 13091288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 29 - 97
Target Start/End: Original strand, 29744210 - 29744277
Alignment:
Q  29 aaatagctatttattacataaaaaatgatcgttaatttataaaattatgaagcaggagtacccgtacac 97  Q
    |||||||| |||||| |||||||| |||| ||||||||||||| || |||||||  |||||| ||||||    
T  29744210 aaatagctctttatttcataaaaa-tgatagttaatttataaatttttgaagcaaaagtaccggtacac 29744277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 62; Significance: 6e-27; HSPs: 24)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 32 - 97
Target Start/End: Complemental strand, 11763269 - 11763204
Alignment:
Q  32 tagctatttattacataaaaaatgatcgttaatttataaaattatgaagcaggagtacccgtacac 97  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  11763269 tagctatttattacataaaaaatgatcgttaatttataaaattatgaagcaggagtaccggtacac 11763204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 24 - 97
Target Start/End: Original strand, 33574655 - 33574728
Alignment:
Q  24 ttgacaaatagctatttattacataaaaaatgatcgttaatttataaaattatgaagcaggagtacccgtacac 97  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||    
T  33574655 ttgaaaaatagctatttattacataaaaaatgatcgttaatttataaaattatgaagcaagagtaccggtacac 33574728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 24 - 97
Target Start/End: Original strand, 33574833 - 33574906
Alignment:
Q  24 ttgacaaatagctatttattacataaaaaatgatcgttaatttataaaattatgaagcaggagtacccgtacac 97  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||    
T  33574833 ttgaaaaatagctatttattacataaaaaatgatcgttaatttataaaattatgaagcaagagtaccggtacac 33574906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 24 - 97
Target Start/End: Complemental strand, 33574337 - 33574264
Alignment:
Q  24 ttgacaaatagctatttattacataaaaaatgatcgttaatttataaaattatgaagcaggagtacccgtacac 97  Q
    |||||||||||||||||| ||||||||||||||||||| ||||||||||||| |||||||||||||| ||||||    
T  33574337 ttgacaaatagctatttactacataaaaaatgatcgttcatttataaaattaagaagcaggagtaccggtacac 33574264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 29 - 97
Target Start/End: Original strand, 4509737 - 4509804
Alignment:
Q  29 aaatagctatttattacataaaaaatgatcgttaatttataaaattatgaagcaggagtacccgtacac 97  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||    
T  4509737 aaatagctatttattacataaaaaat-atcgttaatttataaaattatgaagcaggagtaccggtacac 4509804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 24 - 87
Target Start/End: Original strand, 26958693 - 26958756
Alignment:
Q  24 ttgacaaatagctatttattacataaaaaatgatcgttaatttataaaattatgaagcaggagt 87  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||    
T  26958693 ttgacaaatagctatttattacataaaaaatgatcattaatttataaaattatgaagcatgagt 26958756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 27 - 90
Target Start/End: Original strand, 18772165 - 18772228
Alignment:
Q  27 acaaatagctatttattacataaaaaatgatcgttaatttataaaattatgaagcaggagtacc 90  Q
    |||||||| ||||| || |||||||||||||||||||||||||||||||||||| |||||||||    
T  18772165 acaaatagttatttctttcataaaaaatgatcgttaatttataaaattatgaagtaggagtacc 18772228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 24 - 97
Target Start/End: Complemental strand, 242989 - 242916
Alignment:
Q  24 ttgacaaatagctatttattacataaaaaatgatcgttaatttataaaattatgaagcaggagtacccgtacac 97  Q
    ||||||||||||||||||  |||||||||||||||||||||||||||||||| || ||| ||||| | ||||||    
T  242989 ttgacaaatagctatttacaacataaaaaatgatcgttaatttataaaattaagatgcaagagtatcggtacac 242916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 24 - 97
Target Start/End: Original strand, 23416799 - 23416872
Alignment:
Q  24 ttgacaaatagctatttattacataaaaaatgatcgttaatttataaaattatgaagcaggagtacccgtacac 97  Q
    |||||||||||||||||| |||| |||||| |||| || ||||||||||||| |||||||||||||| ||||||    
T  23416799 ttgacaaatagctatttactacaaaaaaaaagatcattcatttataaaattaagaagcaggagtaccggtacac 23416872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 33 - 79
Target Start/End: Complemental strand, 8549658 - 8549612
Alignment:
Q  33 agctatttattacataaaaaatgatcgttaatttataaaattatgaa 79  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||    
T  8549658 agctatttatttcataaaaaatgatcgttaatttataaaattatgaa 8549612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 24 - 97
Target Start/End: Complemental strand, 528909 - 528836
Alignment:
Q  24 ttgacaaatagctatttattacataaaaaatgatcgttaatttataaaattatgaagcaggagtacccgtacac 97  Q
    ||||||||||| |||||||| || ||||||| ||||||||||||||||||||| ||| | ||||||| ||||||    
T  528909 ttgacaaatagttatttatttcacaaaaaattatcgttaatttataaaattataaagtaagagtaccggtacac 528836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 24 - 80
Target Start/End: Original strand, 9687078 - 9687134
Alignment:
Q  24 ttgacaaatagctatttattacataaaaaatgatcgttaatttataaaattatgaag 80  Q
    |||| |||||| |||||||| ||||||||||||||||||||||||||||||| ||||    
T  9687078 ttgataaatagttatttatttcataaaaaatgatcgttaatttataaaattaagaag 9687134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 27 - 89
Target Start/End: Original strand, 22755547 - 22755609
Alignment:
Q  27 acaaatagctatttattacataaaaaatgatcgttaatttataaaattatgaagcaggagtac 89  Q
    |||||||||||||||||||| ||||||  |||||| |||||||||||||||||| | ||||||    
T  22755547 acaaatagctatttattacacaaaaaagaatcgtttatttataaaattatgaaggaagagtac 22755609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 24 - 97
Target Start/End: Original strand, 1245122 - 1245195
Alignment:
Q  24 ttgacaaatagctatttattacataaaaaatgatcgttaatttataaaattatgaagcaggagtacccgtacac 97  Q
    |||| ||||||||||||| |||||||||||| |||||| ||||||||||||| |||| | ||||| | ||||||    
T  1245122 ttgataaatagctatttactacataaaaaattatcgttcatttataaaattaagaaggaagagtatcggtacac 1245195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 27 - 72
Target Start/End: Original strand, 2565032 - 2565077
Alignment:
Q  27 acaaatagctatttattacataaaaaatgatcgttaatttataaaa 72  Q
    ||||||| ||||||||| ||||||||||||||||||||||||||||    
T  2565032 acaaataactatttatttcataaaaaatgatcgttaatttataaaa 2565077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 24 - 97
Target Start/End: Original strand, 4576687 - 4576760
Alignment:
Q  24 ttgacaaatagctatttattacataaaaaatgatcgttaatttataaaattatgaagcaggagtacccgtacac 97  Q
    |||| |||||| |||||||| || ||||||| ||||||||||||||||||||||||  | ||||||| ||||||    
T  4576687 ttgataaatagttatttatttcacaaaaaataatcgttaatttataaaattatgaaaaaagagtaccggtacac 4576760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 24 - 88
Target Start/End: Complemental strand, 3141144 - 3141080
Alignment:
Q  24 ttgacaaatagctatttattacataaaaaatgatcgttaatttataaaattatgaagcaggagta 88  Q
    ||||||||||| ||||||||||||||||||| ||||||  | |||| ||||| ||||||||||||    
T  3141144 ttgacaaatagttatttattacataaaaaattatcgttcgtatatataattaagaagcaggagta 3141080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 24 - 79
Target Start/End: Original strand, 14779206 - 14779260
Alignment:
Q  24 ttgacaaatagctatttattacataaaaaatgatcgttaatttataaaattatgaa 79  Q
    |||| |||||| |||||||| |||||||||| ||||||||||||||||||||||||    
T  14779206 ttgataaatagttatttatttcataaaaaat-atcgttaatttataaaattatgaa 14779260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 36 - 90
Target Start/End: Original strand, 9662072 - 9662126
Alignment:
Q  36 tatttattacataaaaaatgatcgttaatttataaaattatgaagcaggagtacc 90  Q
    |||||| |||||||||||||||| |||||||||||||||| || ||| |||||||    
T  9662072 tatttactacataaaaaatgatcattaatttataaaattaagatgcaagagtacc 9662126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 24 - 72
Target Start/End: Complemental strand, 8309970 - 8309922
Alignment:
Q  24 ttgacaaatagctatttattacataaaaaatgatcgttaatttataaaa 72  Q
    |||| |||||| ||||| |||||| ||||||||||||||||||||||||    
T  8309970 ttgaaaaatagttatttcttacatgaaaaatgatcgttaatttataaaa 8309922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 29 - 72
Target Start/End: Original strand, 23068653 - 23068695
Alignment:
Q  29 aaatagctatttattacataaaaaatgatcgttaatttataaaa 72  Q
    |||||||||||||||| |||||| ||||||||||||||||||||    
T  23068653 aaatagctatttattatataaaa-atgatcgttaatttataaaa 23068695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 64 - 97
Target Start/End: Original strand, 2565393 - 2565426
Alignment:
Q  64 tttataaaattatgaagcaggagtacccgtacac 97  Q
    ||||||||||||||||||||||||||| ||||||    
T  2565393 tttataaaattatgaagcaggagtaccggtacac 2565426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 64 - 97
Target Start/End: Original strand, 23069042 - 23069075
Alignment:
Q  64 tttataaaattatgaagcaggagtacccgtacac 97  Q
    ||||||||||||||||||||||||||| ||||||    
T  23069042 tttataaaattatgaagcaggagtaccggtacac 23069075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 29 - 97
Target Start/End: Complemental strand, 20469134 - 20469067
Alignment:
Q  29 aaatagctatttattacataaaaaatgatcgttaatttataaaattatgaagcaggagtacccgtacac 97  Q
    |||||||| |||||| |||||||| |||| ||||||||||| | || ||||| | ||||||||||||||    
T  20469134 aaatagctctttatttcataaaaa-tgatagttaatttatagatttttgaagtaagagtacccgtacac 20469067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 62; Significance: 6e-27; HSPs: 31)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 24 - 97
Target Start/End: Complemental strand, 35895415 - 35895342
Alignment:
Q  24 ttgacaaatagctatttattacataaaaaatgatcgttaatttataaaattatgaagcaggagtacccgtacac 97  Q
    ||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||    
T  35895415 ttgacaaatagttatttattacataaaaaatggtcgttaatttataaaattatgaagcaggagtaccggtacac 35895342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 24 - 97
Target Start/End: Complemental strand, 1580351 - 1580278
Alignment:
Q  24 ttgacaaatagctatttattacataaaaaatgatcgttaatttataaaattatgaagcaggagtacccgtacac 97  Q
    ||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||| ||||||| ||||||    
T  1580351 ttgacaaatagctatttattacataaaaaattatcgttaattcataaaattatgaagcaagagtaccggtacac 1580278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 24 - 97
Target Start/End: Complemental strand, 9122260 - 9122187
Alignment:
Q  24 ttgacaaatagctatttattacataaaaaatgatcgttaatttataaaattatgaagcaggagtacccgtacac 97  Q
    ||||||||||| |||||||||||||||||||||||||| ||||||||||||| ||||||| |||||| ||||||    
T  9122260 ttgacaaatagttatttattacataaaaaatgatcgttcatttataaaattaagaagcagaagtaccggtacac 9122187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 24 - 97
Target Start/End: Complemental strand, 17451386 - 17451313
Alignment:
Q  24 ttgacaaatagctatttattacataaaaaatgatcgttaatttataaaattatgaagcaggagtacccgtacac 97  Q
    |||||||||||||||||| ||||||||||||||||||| | ||||||||||| |||||||||||||| ||||||    
T  17451386 ttgacaaatagctatttactacataaaaaatgatcgttcacttataaaattaagaagcaggagtaccggtacac 17451313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 24 - 97
Target Start/End: Complemental strand, 25331559 - 25331486
Alignment:
Q  24 ttgacaaatagctatttattacataaaaaatgatcgttaatttataaaattatgaagcaggagtacccgtacac 97  Q
    |||||||||||||||||| ||||||||||||||| ||| ||||||||||||| |||||||||||||| ||||||    
T  25331559 ttgacaaatagctatttactacataaaaaatgatagttcatttataaaattaagaagcaggagtaccggtacac 25331486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 24 - 97
Target Start/End: Complemental strand, 32602407 - 32602334
Alignment:
Q  24 ttgacaaatagctatttattacataaaaaatgatcgttaatttataaaattatgaagcaggagtacccgtacac 97  Q
    |||||||||||||||||| |||||||||||| |||||| ||||||||||||| |||||||||||||| ||||||    
T  32602407 ttgacaaatagctatttactacataaaaaattatcgttcatttataaaattaagaagcaggagtaccggtacac 32602334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 24 - 80
Target Start/End: Complemental strand, 40946866 - 40946810
Alignment:
Q  24 ttgacaaatagctatttattacataaaaaatgatcgttaatttataaaattatgaag 80  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40946866 ttgaaaaatagctatttattacataaaaaatgatcgttaatttataaaattatgaag 40946810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 24 - 97
Target Start/End: Complemental strand, 7673399 - 7673326
Alignment:
Q  24 ttgacaaatagctatttattacataaaaaatgatcgttaatttataaaattatgaagcaggagtacccgtacac 97  Q
    |||||||||||||||||| ||||||||||| || |||| ||||||||||||| |||||||||||||| ||||||    
T  7673399 ttgacaaatagctatttactacataaaaaacgaccgttcatttataaaattaagaagcaggagtaccggtacac 7673326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 24 - 97
Target Start/End: Original strand, 9589416 - 9589489
Alignment:
Q  24 ttgacaaatagctatttattacataaaaaatgatcgttaatttataaaattatgaagcaggagtacccgtacac 97  Q
    |||||||||||||||||| ||||||||||||||||||| ||||||| ||||| |||| ||||||||| ||||||    
T  9589416 ttgacaaatagctatttaatacataaaaaatgatcgttcatttatataattaagaagtaggagtaccggtacac 9589489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 29 - 90
Target Start/End: Original strand, 30981193 - 30981254
Alignment:
Q  29 aaatagctatttattacataaaaaatgatcgttaatttataaaattatgaagcaggagtacc 90  Q
    ||||||||||||||| |||||||||||||| |||||||||||||||||||||| ||||||||    
T  30981193 aaatagctatttatttcataaaaaatgatcattaatttataaaattatgaagcgggagtacc 30981254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 24 - 89
Target Start/End: Original strand, 33493774 - 33493839
Alignment:
Q  24 ttgacaaatagctatttattacataaaaaatgatcgttaatttataaaattatgaagcaggagtac 89  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||| || ||| ||||||    
T  33493774 ttgacaaatagctatttactacataaaaaatgatcgttaatttataaaattaagatgcaagagtac 33493839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 24 - 90
Target Start/End: Complemental strand, 4298001 - 4297935
Alignment:
Q  24 ttgacaaatagctatttattacataaaaaatgatcgttaatttataaaattatgaagcaggagtacc 90  Q
    |||||||||||||||||| ||||||||||||||| ||||||||||||||||| || ||| |||||||    
T  4298001 ttgacaaatagctatttactacataaaaaatgattgttaatttataaaattaagacgcaagagtacc 4297935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 27 - 97
Target Start/End: Original strand, 6945647 - 6945717
Alignment:
Q  27 acaaatagctatttattacataaaaaatgatcgttaatttataaaattatgaagcaggagtacccgtacac 97  Q
    ||||||||||||| | ||||||||||||||||||||||||||||||||| || ||| ||||||| ||||||    
T  6945647 acaaatagctattaactacataaaaaatgatcgttaatttataaaattaagatgcaagagtaccggtacac 6945717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 24 - 97
Target Start/End: Complemental strand, 32401183 - 32401110
Alignment:
Q  24 ttgacaaatagctatttattacataaaaaatgatcgttaatttataaaattatgaagcaggagtacccgtacac 97  Q
    ||||||||||| |||||| ||||||||||||||||||| ||||||||||||| || ||| ||||||| ||||||    
T  32401183 ttgacaaatagttatttactacataaaaaatgatcgttgatttataaaattaagatgcaagagtaccggtacac 32401110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 24 - 97
Target Start/End: Complemental strand, 43440099 - 43440026
Alignment:
Q  24 ttgacaaatagctatttattacataaaaaatgatcgttaatttataaaattatgaagcaggagtacccgtacac 97  Q
    |||| ||||||||||||| ||||||||||||||||||| ||||||||||||| ||||||| |||| | ||||||    
T  43440099 ttgataaatagctatttactacataaaaaatgatcgttcatttataaaattaagaagcagaagtatcggtacac 43440026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 24 - 97
Target Start/End: Complemental strand, 44143309 - 44143237
Alignment:
Q  24 ttgacaaatagctatttattacataaaaaatgatcgttaatttataaaattatgaagcaggagtacccgtacac 97  Q
    |||||||||||||||||| ||||||||||||||||||| |||||||||| || ||| |||||||||| ||||||    
T  44143309 ttgacaaatagctatttactacataaaaaatgatcgtttatttataaaa-taagaaacaggagtaccggtacac 44143237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 24 - 97
Target Start/End: Original strand, 45157816 - 45157889
Alignment:
Q  24 ttgacaaatagctatttattacataaaaaatgatcgttaatttataaaattatgaagcaggagtacccgtacac 97  Q
    ||||||||||| |||||||| ||||||||||||||||||||||||||| |||||||| | ||||| | ||||||    
T  45157816 ttgacaaatagttatttatttcataaaaaatgatcgttaatttataaacttatgaagaaagagtatcggtacac 45157889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 24 - 82
Target Start/End: Complemental strand, 18998819 - 18998761
Alignment:
Q  24 ttgacaaatagctatttattacataaaaaatgatcgttaatttataaaattatgaagca 82  Q
    |||||||||||||||||| ||||||||||||||||||| || |||||||||| ||||||    
T  18998819 ttgacaaatagctatttactacataaaaaatgatcgttcatgtataaaattaagaagca 18998761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 27 - 97
Target Start/End: Original strand, 27401035 - 27401105
Alignment:
Q  27 acaaatagctatttattacataaaaaatgatcgttaatttataaaattatgaagcaggagtacccgtacac 97  Q
    |||||||  |||||||| |||||||||||||||||||||||||||||||||||| | ||||| | ||||||    
T  27401035 acaaataattatttatttcataaaaaatgatcgttaatttataaaattatgaagaaagagtatcagtacac 27401105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 24 - 97
Target Start/End: Complemental strand, 21404302 - 21404229
Alignment:
Q  24 ttgacaaatagctatttattacataaaaaatgatcgttaatttataaaattatgaagcaggagtacccgtacac 97  Q
    ||||||||||| |||||| ||||||||||||||||||| ||||||| ||||| |||| ||||||| | ||||||    
T  21404302 ttgacaaatagatatttaatacataaaaaatgatcgttcatttatataattaagaagtaggagtatcggtacac 21404229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 24 - 83
Target Start/End: Complemental strand, 4049081 - 4049022
Alignment:
Q  24 ttgacaaatagctatttattacataaaaaatgatcgttaatttataaaattatgaagcag 83  Q
    |||| |||||| |||||| ||||||||||||||||||| ||||||||||||| |||||||    
T  4049081 ttgataaatagttatttactacataaaaaatgatcgttcatttataaaattaagaagcag 4049022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 29 - 72
Target Start/End: Original strand, 39620501 - 39620544
Alignment:
Q  29 aaatagctatttattacataaaaaatgatcgttaatttataaaa 72  Q
    |||||||||||| |||||||||||||||||||||||||||||||    
T  39620501 aaatagctatttgttacataaaaaatgatcgttaatttataaaa 39620544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 24 - 97
Target Start/End: Complemental strand, 38073209 - 38073138
Alignment:
Q  24 ttgacaaatagctatttattacataaaaaatgatcgttaatttataaaattatgaagcaggagtacccgtacac 97  Q
    |||||||||| ||||||||| |||||||  |||||||||||||||||| |||||||| | ||||||| ||||||    
T  38073209 ttgacaaatatctatttatttcataaaa--tgatcgttaatttataaatttatgaagtaagagtaccggtacac 38073138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 24 - 87
Target Start/End: Complemental strand, 2283268 - 2283207
Alignment:
Q  24 ttgacaaatagctatttattacataaaaaatgatcgttaatttataaaattatgaagcaggagt 87  Q
    |||||||||||||||||||| ||||||| |  |||||||||||||||| |||||||||| ||||    
T  2283268 ttgacaaatagctatttatttcataaaata--atcgttaatttataaatttatgaagcaagagt 2283207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 24 - 96
Target Start/End: Original strand, 3261208 - 3261280
Alignment:
Q  24 ttgacaaatagctatttattacataaaaaatgatcgttaatttataaaattatgaagcaggagtacccgtaca 96  Q
    |||| |||||| ||||| |||||| |||||||||||||||||| |||||| |||||||  ||||||| |||||    
T  3261208 ttgaaaaatagttatttcttacatgaaaaatgatcgttaatttgtaaaatcatgaagcgagagtaccggtaca 3261280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 24 - 88
Target Start/End: Original strand, 4740527 - 4740591
Alignment:
Q  24 ttgacaaatagctatttattacataaaaaatgatcgttaatttataaaattatgaagcaggagta 88  Q
    ||||||||||| |||||| |||||||||||| ||||||  |||||| ||||| ||||||||||||    
T  4740527 ttgacaaatagttatttactacataaaaaattatcgttcgtttatataattaagaagcaggagta 4740591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 24 - 88
Target Start/End: Original strand, 14840100 - 14840163
Alignment:
Q  24 ttgacaaatagctatttattacataaaaaatgatcgttaatttataaaattatgaagcaggagta 88  Q
    |||||||||||||||||| |||||||||||| || ||| |||||||||||||  |||||||||||    
T  14840100 ttgacaaatagctatttactacataaaaaat-atagttcatttataaaattaaaaagcaggagta 14840163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 24 - 90
Target Start/End: Complemental strand, 42640953 - 42640889
Alignment:
Q  24 ttgacaaatagctatttattacataaaaaatgatcgttaatttataaaattatgaagcaggagtacc 90  Q
    |||||||||| ||||||||| |||||||  |||||||||||||||||| |||||||| | |||||||    
T  42640953 ttgacaaatacctatttatttcataaaa--tgatcgttaatttataaatttatgaagtaagagtacc 42640889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 89
Target Start/End: Complemental strand, 37781969 - 37781906
Alignment:
Q  24 ttgacaaatagctatttattacataaaaaatgatcgttaatttataaaattatgaagcaggagtac 89  Q
    ||||||||||||| |||||| |||||||  |||||||| ||||||||| |||||||| | ||||||    
T  37781969 ttgacaaatagctctttatttcataaaa--tgatcgttcatttataaatttatgaaggaagagtac 37781906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 26 - 79
Target Start/End: Complemental strand, 19268667 - 19268615
Alignment:
Q  26 gacaaatagctatttattacataaaaaatgatcgttaatttataaaattatgaa 79  Q
    ||||||||||| |||||| |||||||| ||||||||||||| |||| |||||||    
T  19268667 gacaaatagctctttatttcataaaaa-tgatcgttaatttgtaaatttatgaa 19268615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 24 - 88
Target Start/End: Original strand, 40495749 - 40495813
Alignment:
Q  24 ttgacaaatagctatttattacataaaaaatgatcgttaatttataaaattatgaagcaggagta 88  Q
    |||||||||| ||||||  | ||||||| ||||| ||||||||||||||||| ||| ||| ||||    
T  40495749 ttgacaaataactatttcctgcataaaatatgattgttaatttataaaattaagaaacagaagta 40495813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 59; Significance: 4e-25; HSPs: 38)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 24 - 82
Target Start/End: Original strand, 3214823 - 3214881
Alignment:
Q  24 ttgacaaatagctatttattacataaaaaatgatcgttaatttataaaattatgaagca 82  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3214823 ttgacaaatagctatttattacataaaaaatgatcgttaatttataaaattatgaagca 3214881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 24 - 97
Target Start/End: Complemental strand, 23406756 - 23406683
Alignment:
Q  24 ttgacaaatagctatttattacataaaaaatgatcgttaatttataaaattatgaagcaggagtacccgtacac 97  Q
    |||| |||||| |||||||| |||||||||||||||||||| ||||||||||||||||||||||||| ||||||    
T  23406756 ttgaaaaatagttatttattgcataaaaaatgatcgttaatatataaaattatgaagcaggagtaccggtacac 23406683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 18 - 90
Target Start/End: Complemental strand, 26413735 - 26413664
Alignment:
Q  18 tattttttgacaaatagctatttattacataaaaaatgatcgttaatttataaaattatgaagcaggagtacc 90  Q
    |||||||||| ||||| |||||||||||||||||||||||| ||||||| |||||||||||||||||||||||    
T  26413735 tattttttgataaataactatttattacataaaaaatgatcattaattt-taaaattatgaagcaggagtacc 26413664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 24 - 97
Target Start/End: Complemental strand, 7574655 - 7574582
Alignment:
Q  24 ttgacaaatagctatttattacataaaaaatgatcgttaatttataaaattatgaagcaggagtacccgtacac 97  Q
    |||| |||||||||||||||||||||||||| |||||| ||||||||||||| |||||||||||| | ||||||    
T  7574655 ttgataaatagctatttattacataaaaaattatcgttcatttataaaattaagaagcaggagtatcggtacac 7574582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 24 - 97
Target Start/End: Complemental strand, 26605160 - 26605087
Alignment:
Q  24 ttgacaaatagctatttattacataaaaaatgatcgttaatttataaaattatgaagcaggagtacccgtacac 97  Q
    |||| ||||| |||||||||| ||||||||| ||||||||||||||||||||||||||| ||||||| ||||||    
T  26605160 ttgataaataactatttattatataaaaaattatcgttaatttataaaattatgaagcaagagtaccggtacac 26605087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 24 - 88
Target Start/End: Original strand, 3602570 - 3602634
Alignment:
Q  24 ttgacaaatagctatttattacataaaaaatgatcgttaatttataaaattatgaagcaggagta 88  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||| || ||| |||||    
T  3602570 ttgacaaatagctatttactacataaaaaatgatcgttaatttataaaattaagatgcaagagta 3602634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 24 - 79
Target Start/End: Complemental strand, 37504663 - 37504608
Alignment:
Q  24 ttgacaaatagctatttattacataaaaaatgatcgttaatttataaaattatgaa 79  Q
    ||||||||||| |||||||| |||||||||||||||||||||||||||||||||||    
T  37504663 ttgacaaatagttatttatttcataaaaaatgatcgttaatttataaaattatgaa 37504608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 24 - 90
Target Start/End: Complemental strand, 11750523 - 11750457
Alignment:
Q  24 ttgacaaatagctatttattacataaaaaatgatcgttaatttataaaattatgaagcaggagtacc 90  Q
    ||||||||||| |||||| ||||||||||||||||||| | ||||||||||| ||||||||||||||    
T  11750523 ttgacaaatagttatttactacataaaaaatgatcgttcaattataaaattaagaagcaggagtacc 11750457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 24 - 90
Target Start/End: Complemental strand, 32529284 - 32529218
Alignment:
Q  24 ttgacaaatagctatttattacataaaaaatgatcgttaatttataaaattatgaagcaggagtacc 90  Q
    |||| |||||| |||||||| |||||||||||||||||||||||||||||||||||| | |||||||    
T  32529284 ttgataaatagttatttatttcataaaaaatgatcgttaatttataaaattatgaagaaagagtacc 32529218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 24 - 97
Target Start/End: Original strand, 15716208 - 15716281
Alignment:
Q  24 ttgacaaatagctatttattacataaaaaatgatcgttaatttataaaattatgaagcaggagtacccgtacac 97  Q
    |||||||||| || |||| ||||||||||||||||||| ||||||||||||| |||| ||||||||| ||||||    
T  15716208 ttgacaaataactgtttactacataaaaaatgatcgttcatttataaaattaagaagtaggagtaccggtacac 15716281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 24 - 97
Target Start/End: Complemental strand, 28264854 - 28264781
Alignment:
Q  24 ttgacaaatagctatttattacataaaaaatgatcgttaatttataaaattatgaagcaggagtacccgtacac 97  Q
    |||| |||||| ||||||||||||||||||| |||||| ||||||||||||| |||||||||||| | ||||||    
T  28264854 ttgataaatagttatttattacataaaaaattatcgttcatttataaaattaagaagcaggagtatcggtacac 28264781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 24 - 97
Target Start/End: Complemental strand, 35291430 - 35291357
Alignment:
Q  24 ttgacaaatagctatttattacataaaaaatgatcgttaatttataaaattatgaagcaggagtacccgtacac 97  Q
    |||| |||||| |||||||| |||||||||| ||||||||||||||||||||||||| | ||||||| ||||||    
T  35291430 ttgataaatagttatttatttcataaaaaataatcgttaatttataaaattatgaagaaagagtaccggtacac 35291357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 24 - 84
Target Start/End: Complemental strand, 1269112 - 1269052
Alignment:
Q  24 ttgacaaatagctatttattacataaaaaatgatcgttaatttataaaattatgaagcagg 84  Q
    |||||||||||||||||| |||||||||||||||||||  |||||||||||| ||||||||    
T  1269112 ttgacaaatagctatttactacataaaaaatgatcgttcgtttataaaattaagaagcagg 1269052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 24 - 96
Target Start/End: Complemental strand, 24953030 - 24952958
Alignment:
Q  24 ttgacaaatagctatttattacataaaaaatgatcgttaatttataaaattatgaagcaggagtacccgtaca 96  Q
    ||||||||||| |||||| ||||||||||||||||||| ||||||||||||| |||| |||| |||| |||||    
T  24953030 ttgacaaatagttatttactacataaaaaatgatcgttcatttataaaattaagaagtaggaataccggtaca 24952958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 35 - 98
Target Start/End: Complemental strand, 45232140 - 45232077
Alignment:
Q  35 ctatttattacataaaaaatgatcgttaatttataaaattatgaagcaggagtacccgtacaca 98  Q
    |||||||||||||||||||||||| |||||||||||||||| || ||| ||||||| |||||||    
T  45232140 ctatttattacataaaaaatgatcattaatttataaaattaagatgcaagagtaccggtacaca 45232077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 24 - 90
Target Start/End: Original strand, 30076943 - 30077009
Alignment:
Q  24 ttgacaaatagctatttattacataaaaaatgatcgttaatttataaaattatgaagcaggagtacc 90  Q
    ||||||||||| |||||| |||||||||||||||| || ||||||||||||| |||| |||||||||    
T  30076943 ttgacaaatagttatttactacataaaaaatgatcattcatttataaaattaagaaggaggagtacc 30077009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 24 - 97
Target Start/End: Complemental strand, 29606372 - 29606299
Alignment:
Q  24 ttgacaaatagctatttattacataaaaaatgatcgttaatttataaaattatgaagcaggagtacccgtacac 97  Q
    |||||||||| ||||||| |||||||||||| |||||| ||||||||||||| |||||| |||| || ||||||    
T  29606372 ttgacaaataactatttactacataaaaaataatcgttcatttataaaattaagaagcaagagtcccagtacac 29606299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 24 - 97
Target Start/End: Complemental strand, 38665561 - 38665488
Alignment:
Q  24 ttgacaaatagctatttattacataaaaaatgatcgttaatttataaaattatgaagcaggagtacccgtacac 97  Q
    |||||||||| ||||||| ||||||||||||||||||| ||||||||||||| | | | |||||||| ||||||    
T  38665561 ttgacaaataactatttactacataaaaaatgatcgttcatttataaaattaaggaaccggagtaccggtacac 38665488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 24 - 97
Target Start/End: Original strand, 38666172 - 38666245
Alignment:
Q  24 ttgacaaatagctatttattacataaaaaatgatcgttaatttataaaattatgaagcaggagtacccgtacac 97  Q
    |||||||||| |||||||  |||||||||||||||||| |||||||||||||  || |||||||||| ||||||    
T  38666172 ttgacaaataactatttaccacataaaaaatgatcgttcatttataaaattaaaaaacaggagtaccggtacac 38666245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 33 - 97
Target Start/End: Complemental strand, 6791539 - 6791475
Alignment:
Q  33 agctatttattacataaaaaatgatcgttaatttataaaattatgaagcaggagtacccgtacac 97  Q
    ||||||||||| |||||||||||||||||| ||||||||||||||||  | ||||||| ||||||    
T  6791539 agctatttatttcataaaaaatgatcgttactttataaaattatgaaaaaagagtaccggtacac 6791475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 24 - 96
Target Start/End: Complemental strand, 17306705 - 17306633
Alignment:
Q  24 ttgacaaatagctatttattacataaaaaatgatcgttaatttataaaattatgaagcaggagtacccgtaca 96  Q
    |||| |||||||||||| |||||| |||||||||||||||||| |||||| |||||||  ||||||| |||||    
T  17306705 ttgaaaaatagctatttcttacatgaaaaatgatcgttaatttgtaaaatcatgaagcgagagtaccggtaca 17306633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 24 - 96
Target Start/End: Complemental strand, 23110534 - 23110462
Alignment:
Q  24 ttgacaaatagctatttattacataaaaaatgatcgttaatttataaaattatgaagcaggagtacccgtaca 96  Q
    ||||||||||| |||||| |||||||||||||||| || |||||||||||||  || |||||||||| |||||    
T  23110534 ttgacaaatagttatttactacataaaaaatgatcattcatttataaaattaaaaaacaggagtaccagtaca 23110462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 24 - 88
Target Start/End: Original strand, 47642801 - 47642865
Alignment:
Q  24 ttgacaaatagctatttattacataaaaaatgatcgttaatttataaaattatgaagcaggagta 88  Q
    ||||||| |||||||||| ||||||||||| ||||||| ||||||||||||| |||||| |||||    
T  47642801 ttgacaattagctatttactacataaaaaacgatcgttcatttataaaattaagaagcatgagta 47642865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 23 - 97
Target Start/End: Complemental strand, 46575207 - 46575132
Alignment:
Q  23 tttgacaaatagctatttattacataaaaaa-tgatcgttaatttataaaattatgaagcaggagtacccgtacac 97  Q
    ||||||||||| ||||||| || | |||||| |||||||| ||||||||||||| |||||||||||||| ||||||    
T  46575207 tttgacaaataactatttactataaaaaaaaatgatcgttcatttataaaattaagaagcaggagtaccggtacac 46575132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 33 - 79
Target Start/End: Complemental strand, 41968527 - 41968481
Alignment:
Q  33 agctatttattacataaaaaatgatcgttaatttataaaattatgaa 79  Q
    ||||||||||| |||||||||| ||||||||||||||||||||||||    
T  41968527 agctatttatttcataaaaaataatcgttaatttataaaattatgaa 41968481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 48 - 97
Target Start/End: Original strand, 15954587 - 15954636
Alignment:
Q  48 aaaaaatgatcgttaatttataaaattatgaagcaggagtacccgtacac 97  Q
    ||||||||||||||||||||||||||||||||| | ||||||| ||||||    
T  15954587 aaaaaatgatcgttaatttataaaattatgaagaaagagtaccggtacac 15954636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 24 - 97
Target Start/End: Original strand, 35358005 - 35358078
Alignment:
Q  24 ttgacaaatagctatttattacataaaaaatgatcgttaatttataaaattatgaagcaggagtacccgtacac 97  Q
    |||| |||||| |||||||| |||||||||||||| ||||||||||||||||| ||| | || |||| ||||||    
T  35358005 ttgataaatagttatttatttcataaaaaatgatctttaatttataaaattattaagaaagactaccggtacac 35358078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 46 - 97
Target Start/End: Original strand, 30891581 - 30891632
Alignment:
Q  46 ataaaaaatgatcgttaatttataaaattatgaagcaggagtacccgtacac 97  Q
    ||||||||||||||||||||||||||||||||||| | ||||| | ||||||    
T  30891581 ataaaaaatgatcgttaatttataaaattatgaagaaagagtatcggtacac 30891632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 27 - 82
Target Start/End: Complemental strand, 41046939 - 41046884
Alignment:
Q  27 acaaatagctatttattacataaaaaatgatcgttaatttataaaattatgaagca 82  Q
    ||||||| ||||||||  |||||||||| ||||||||||||||||||||| |||||    
T  41046939 acaaataactatttatatcataaaaaattatcgttaatttataaaattataaagca 41046884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 36 - 97
Target Start/End: Complemental strand, 22967502 - 22967440
Alignment:
Q  36 tatttattacataaaaaa-tgatcgttaatttataaaattatgaagcaggagtacccgtacac 97  Q
    |||||||| ||||||||| | ||||||||||||||||||||||||| | ||||||| ||||||    
T  22967502 tatttatttcataaaaaaataatcgttaatttataaaattatgaagtaagagtaccggtacac 22967440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 27 - 80
Target Start/End: Original strand, 21936817 - 21936870
Alignment:
Q  27 acaaatagctatttattacataaaaaatgatcgttaatttataaaattatgaag 80  Q
    |||||||||||||||||  | |||||| |||||||||| |||||||||||||||    
T  21936817 acaaatagctatttatttaaaaaaaaaagatcgttaatgtataaaattatgaag 21936870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 27 - 95
Target Start/End: Original strand, 23561411 - 23561478
Alignment:
Q  27 acaaatagctatttattacataaaaaatgatcgttaatttataaaattatgaagcaggagtacccgtac 95  Q
    ||||||| ||||||||| |||||||  |||||||||||||||| | |||||||||| ||||||| ||||    
T  23561411 acaaataactatttatttcataaaat-tgatcgttaatttatagatttatgaagcacgagtaccggtac 23561478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 50 - 98
Target Start/End: Original strand, 42584089 - 42584137
Alignment:
Q  50 aaaatgatcgttaatttataaaattatgaagcaggagtacccgtacaca 98  Q
    ||||||||| |||||||||||| |||||||||||||||| | |||||||    
T  42584089 aaaatgatcattaatttataaatttatgaagcaggagtatcggtacaca 42584137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 24 - 90
Target Start/End: Original strand, 31311646 - 31311710
Alignment:
Q  24 ttgacaaatagctatttattacataaaaaatgatcgttaatttataaaattatgaagcaggagtacc 90  Q
    ||||||||||||| |||||| ||||||| |  |||||||||||||||| ||||| |||| |||||||    
T  31311646 ttgacaaatagctttttatttcataaaata--atcgttaatttataaatttatggagcaagagtacc 31311710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 50 - 97
Target Start/End: Complemental strand, 41769365 - 41769318
Alignment:
Q  50 aaaatgatcgttaatttataaaattatgaagcaggagtacccgtacac 97  Q
    ||||| |||||||| |||||||||| ||||||||||||||| ||||||    
T  41769365 aaaataatcgttaaattataaaattttgaagcaggagtaccagtacac 41769318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 27 - 97
Target Start/End: Original strand, 15877380 - 15877449
Alignment:
Q  27 acaaatagctatttattacataaaaaatgatcgttaatttataaaattatgaagcaggagtacccgtacac 97  Q
    |||||||||| ||| |||||||||| ||||||||||| |||| || ||||||| |||| ||||| ||||||    
T  15877380 acaaatagctcttttttacataaaa-atgatcgttaacttattaatttatgaaacaggtgtaccggtacac 15877449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 24 - 80
Target Start/End: Complemental strand, 8578027 - 8577973
Alignment:
Q  24 ttgacaaatagctatttattacataaaaaatgatcgttaatttataaaattatgaag 80  Q
    |||||||||| |||||||||  ||||||  |||||||||||||||||| ||||||||    
T  8578027 ttgacaaatacctatttattttataaaa--tgatcgttaatttataaatttatgaag 8577973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 47 - 83
Target Start/End: Complemental strand, 40331139 - 40331103
Alignment:
Q  47 taaaaaatgatcgttaatttataaaattatgaagcag 83  Q
    |||||||||||| |||||||||||| |||||||||||    
T  40331139 taaaaaatgatcattaatttataaatttatgaagcag 40331103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 59; Significance: 4e-25; HSPs: 52)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 24 - 90
Target Start/End: Original strand, 54996405 - 54996471
Alignment:
Q  24 ttgacaaatagctatttattacataaaaaatgatcgttaatttataaaattatgaagcaggagtacc 90  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  54996405 ttgacaaagagctatttattacataaaaaatgatcgttaatttataaaattatgaaacaggagtacc 54996471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 24 - 97
Target Start/End: Complemental strand, 27990640 - 27990567
Alignment:
Q  24 ttgacaaatagctatttattacataaaaaatgatcgttaatttataaaattatgaagcaggagtacccgtacac 97  Q
    |||||||||||||||||| ||||||||||||||||||| ||||||||||||| |||||||||||||| ||||||    
T  27990640 ttgacaaatagctatttactacataaaaaatgatcgttcatttataaaattaagaagcaggagtaccggtacac 27990567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 24 - 96
Target Start/End: Complemental strand, 5970803 - 5970731
Alignment:
Q  24 ttgacaaatagctatttattacataaaaaatgatcgttaatttataaaattatgaagcaggagtacccgtaca 96  Q
    ||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||| ||||||| |||||    
T  5970803 ttgacaaatagctatttattacataaaaaatgattattaatttataaaattatgaagcaagagtaccggtaca 5970731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 22 - 97
Target Start/End: Original strand, 56303138 - 56303213
Alignment:
Q  22 ttttgacaaatagctatttattacataaaaaatgatcgttaatttataaaattatgaagcaggagtacccgtacac 97  Q
    ||||||||||||  ||||||||||||||||||| ||||||||||||||||||||| ||||||||||||| ||||||    
T  56303138 ttttgacaaataaatatttattacataaaaaattatcgttaatttataaaattataaagcaggagtaccggtacac 56303213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 24 - 90
Target Start/End: Complemental strand, 27761504 - 27761438
Alignment:
Q  24 ttgacaaatagctatttattacataaaaaatgatcgttaatttataaaattatgaagcaggagtacc 90  Q
    ||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||| |||||||    
T  27761504 ttgacaaatagctatttattacataaaaaattatcgttaattcataaaattatgaagcaagagtacc 27761438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 24 - 86
Target Start/End: Complemental strand, 32845759 - 32845697
Alignment:
Q  24 ttgacaaatagctatttattacataaaaaatgatcgttaatttataaaattatgaagcaggag 86  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  32845759 ttgacaaaaagctatttattacataaaaaatgatcgttaatttataaaattatgaagcgggag 32845697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 24 - 97
Target Start/End: Complemental strand, 24535586 - 24535513
Alignment:
Q  24 ttgacaaatagctatttattacataaaaaatgatcgttaatttataaaattatgaagcaggagtacccgtacac 97  Q
    |||||||||||||||| | ||||||||||||||||||| ||||||||||||| |||||||||||||| ||||||    
T  24535586 ttgacaaatagctattaactacataaaaaatgatcgttcatttataaaattaagaagcaggagtaccggtacac 24535513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 27 - 90
Target Start/End: Complemental strand, 32289004 - 32288941
Alignment:
Q  27 acaaatagctatttattacataaaaaatgatcgttaatttataaaattatgaagcaggagtacc 90  Q
    ||||||||||||||||| |||||||||||||||||||| |||||||||||||||||| ||||||    
T  32289004 acaaatagctatttatttcataaaaaatgatcgttaatatataaaattatgaagcagaagtacc 32288941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 24 - 90
Target Start/End: Original strand, 126880 - 126946
Alignment:
Q  24 ttgacaaatagctatttattacataaaaaatgatcgttaatttataaaattatgaagcaggagtacc 90  Q
    |||||||||| ||||||| ||||||||||||||||||| ||||||||||||| ||||||||||||||    
T  126880 ttgacaaataactatttactacataaaaaatgatcgttcatttataaaattaagaagcaggagtacc 126946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 24 - 90
Target Start/End: Original strand, 4720773 - 4720839
Alignment:
Q  24 ttgacaaatagctatttattacataaaaaatgatcgttaatttataaaattatgaagcaggagtacc 90  Q
    |||||||||||||||||| |||||||||| |||||||| ||||||||||||| ||||||||||||||    
T  4720773 ttgacaaatagctatttactacataaaaattgatcgttcatttataaaattaagaagcaggagtacc 4720839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 24 - 90
Target Start/End: Complemental strand, 28835892 - 28835826
Alignment:
Q  24 ttgacaaatagctatttattacataaaaaatgatcgttaatttataaaattatgaagcaggagtacc 90  Q
    |||||||||||||||||| ||||||||||| ||||||| ||||||||||||| ||||||||||||||    
T  28835892 ttgacaaatagctatttactacataaaaaacgatcgttcatttataaaattaagaagcaggagtacc 28835826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 24 - 97
Target Start/End: Original strand, 1857106 - 1857179
Alignment:
Q  24 ttgacaaatagctatttattacataaaaaatgatcgttaatttataaaattatgaagcaggagtacccgtacac 97  Q
    |||||||||||||||||| ||||||||||| || |||| ||||||||||||| |||||||||||||| ||||||    
T  1857106 ttgacaaatagctatttactacataaaaaacgaccgttcatttataaaattaagaagcaggagtaccggtacac 1857179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 24 - 97
Target Start/End: Complemental strand, 24980045 - 24979973
Alignment:
Q  24 ttgacaaatagctatttattacataaaaaatgatcgttaatttataaaattatgaagcaggagtacccgtacac 97  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||  |||||| ||||||    
T  24980045 ttgacaaatagctatttattacataaaaaattatcgttaatttataaaa-tatgaagcaatagtaccggtacac 24979973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 22 - 90
Target Start/End: Original strand, 31999026 - 31999093
Alignment:
Q  22 ttttgacaaatagctatttattacataaaaaatgatcgttaatttataaaattatgaagcaggagtacc 90  Q
    |||||||||||||||||| |||||||||||||| |||||||| |||||||||||||||||| |||||||    
T  31999026 ttttgacaaatagctattaattacataaaaaattatcgttaa-ttataaaattatgaagcaagagtacc 31999093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 24 - 80
Target Start/End: Original strand, 38008456 - 38008512
Alignment:
Q  24 ttgacaaatagctatttattacataaaaaatgatcgttaatttataaaattatgaag 80  Q
    ||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||    
T  38008456 ttgacaaatagttatttatttcataaaaaatgatcgttaatttataaaattatgaag 38008512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 31 - 97
Target Start/End: Complemental strand, 30348260 - 30348194
Alignment:
Q  31 atagctatttattacataaaaaatgatcgttaatttataaaattatgaagcaggagtacccgtacac 97  Q
    |||| |||||||| |||||||||||||||||||||||||||||||||||| | ||||||| ||||||    
T  30348260 atagttatttatttcataaaaaatgatcgttaatttataaaattatgaagaaagagtaccggtacac 30348194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 24 - 90
Target Start/End: Complemental strand, 42177446 - 42177380
Alignment:
Q  24 ttgacaaatagctatttattacataaaaaatgatcgttaatttataaaattatgaagcaggagtacc 90  Q
    |||| |||||| |||||||| |||||||||||||||||||||||||||||||||||| | |||||||    
T  42177446 ttgataaatagttatttatttcataaaaaatgatcgttaatttataaaattatgaagaaagagtacc 42177380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 24 - 97
Target Start/End: Original strand, 26118055 - 26118128
Alignment:
Q  24 ttgacaaatagctatttattacataaaaaatgatcgttaatttataaaattatgaagcaggagtacccgtacac 97  Q
    ||||||||||| |||||| ||||||||||||||||||| ||||||||||||| || ||| ||||||| ||||||    
T  26118055 ttgacaaatagttatttactacataaaaaatgatcgttgatttataaaattaagatgcaagagtaccggtacac 26118128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 24 - 97
Target Start/End: Original strand, 29364484 - 29364557
Alignment:
Q  24 ttgacaaatagctatttattacataaaaaatgatcgttaatttataaaattatgaagcaggagtacccgtacac 97  Q
    ||||||||||| |||||| ||||||||||||||||||| ||| |||||||||  ||||||||||||| ||||||    
T  29364484 ttgacaaatagttatttactacataaaaaatgatcgttcattcataaaattaaaaagcaggagtaccggtacac 29364557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 24 - 97
Target Start/End: Original strand, 34829025 - 34829098
Alignment:
Q  24 ttgacaaatagctatttattacataaaaaatgatcgttaatttataaaattatgaagcaggagtacccgtacac 97  Q
    ||||||||||||||||||  ||||||||||| |||||||||||||||||||| || ||| ||||||| ||||||    
T  34829025 ttgacaaatagctatttacaacataaaaaattatcgttaatttataaaattaagatgcaagagtaccggtacac 34829098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 24 - 97
Target Start/End: Complemental strand, 45692726 - 45692653
Alignment:
Q  24 ttgacaaatagctatttattacataaaaaatgatcgttaatttataaaattatgaagcaggagtacccgtacac 97  Q
    |||| |||||||||||||||||||||||||| |||||| ||||||||||||| |||||| ||||| | ||||||    
T  45692726 ttgataaatagctatttattacataaaaaattatcgttcatttataaaattaagaagcaagagtatcggtacac 45692653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 29 - 90
Target Start/End: Complemental strand, 53936606 - 53936545
Alignment:
Q  29 aaatagctatttattacataaaaaatgatcgttaatttataaaattatgaagcaggagtacc 90  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||| || ||| |||||||    
T  53936606 aaatagctatttactacataaaaaatgatcgttaatttataaaattaagatgcaagagtacc 53936545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 36 - 96
Target Start/End: Complemental strand, 33491254 - 33491194
Alignment:
Q  36 tatttattacataaaaaatgatcgttaatttataaaattatgaagcaggagtacccgtaca 96  Q
    |||||||||||||||| ||||||||||||||||  |||||||||||||||||||| |||||    
T  33491254 tatttattacataaaatatgatcgttaatttatttaattatgaagcaggagtaccggtaca 33491194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 27 - 79
Target Start/End: Complemental strand, 36631136 - 36631084
Alignment:
Q  27 acaaatagctatttattacataaaaaatgatcgttaatttataaaattatgaa 79  Q
    |||||||| |||||||| |||||||||||||||||||||||||||||||||||    
T  36631136 acaaatagttatttatttcataaaaaatgatcgttaatttataaaattatgaa 36631084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 24 - 79
Target Start/End: Complemental strand, 48647123 - 48647068
Alignment:
Q  24 ttgacaaatagctatttattacataaaaaatgatcgttaatttataaaattatgaa 79  Q
    ||||||||||| |||||||| || ||||||||||||||||||||||||||||||||    
T  48647123 ttgacaaatagttatttatttcacaaaaaatgatcgttaatttataaaattatgaa 48647068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 22 - 76
Target Start/End: Original strand, 423453 - 423506
Alignment:
Q  22 ttttgacaaatagctatttattacataaaaaatgatcgttaatttataaaattat 76  Q
    |||||||||||||||| ||||||||||||||||||||||||| ||||||||||||    
T  423453 ttttgacaaatagctacttattacataaaaaatgatcgttaa-ttataaaattat 423506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 24 - 90
Target Start/End: Original strand, 8256744 - 8256810
Alignment:
Q  24 ttgacaaatagctatttattacataaaaaatgatcgttaatttataaaattatgaagcaggagtacc 90  Q
    ||||||||||| |||||| |||||||||||||||| || ||||||||||||| |||| |||||||||    
T  8256744 ttgacaaatagttatttactacataaaaaatgatcattcatttataaaattaagaaggaggagtacc 8256810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 24 - 90
Target Start/End: Original strand, 8270162 - 8270228
Alignment:
Q  24 ttgacaaatagctatttattacataaaaaatgatcgttaatttataaaattatgaagcaggagtacc 90  Q
    ||||||||||| |||||| |||||||||||||||| || ||||||||||||| |||| |||||||||    
T  8270162 ttgacaaatagttatttactacataaaaaatgatcattcatttataaaattaagaaggaggagtacc 8270228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 27 - 89
Target Start/End: Complemental strand, 9356482 - 9356420
Alignment:
Q  27 acaaatagctatttattacataaaaaatgatcgttaatttataaaattatgaagcaggagtac 89  Q
    |||||||||||||||||  ||||||||||||  |||||||||||||||||||||||| |||||    
T  9356482 acaaatagctatttattttataaaaaatgatttttaatttataaaattatgaagcagaagtac 9356420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 24 - 90
Target Start/End: Original strand, 43735435 - 43735501
Alignment:
Q  24 ttgacaaatagctatttattacataaaaaatgatcgttaatttataaaattatgaagcaggagtacc 90  Q
    |||||||||| ||||||| || |||||||||||||||||||||||||||||| || ||| |||||||    
T  43735435 ttgacaaataactatttactatataaaaaatgatcgttaatttataaaattaagatgcaagagtacc 43735501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 28 - 90
Target Start/End: Original strand, 50733164 - 50733226
Alignment:
Q  28 caaatagctatttattacataaaaaatgatcgttaatttataaaattatgaagcaggagtacc 90  Q
    |||||||||||||| ||||||||||||||||||| |||||||||||||  || ||||||||||    
T  50733164 caaatagctatttactacataaaaaatgatcgttcatttataaaattaaaaaacaggagtacc 50733226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 29 - 90
Target Start/End: Complemental strand, 50383428 - 50383367
Alignment:
Q  29 aaatagctatttattacataaaaaatgatcgttaatttataaaattatgaagcaggagtacc 90  Q
    |||||| ||||| |||||| |||||||||||||||||||||||||||||||||  |||||||    
T  50383428 aaatagatatttcttacatgaaaaatgatcgttaatttataaaattatgaagcgagagtacc 50383367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 29 - 97
Target Start/End: Complemental strand, 352572 - 352505
Alignment:
Q  29 aaatagctatttattacataaaaaatgatcgttaatttataaaattatgaagcaggagtacccgtacac 97  Q
    |||||| ||||||||| ||||||| |||||||||||||||||||||||||| |||||||| | ||||||    
T  352572 aaatagttatttattatataaaaa-tgatcgttaatttataaaattatgaaacaggagtatcggtacac 352505  T

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Target: chr4; HSP #34
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 24 - 80
Target Start/End: Original strand, 3763415 - 3763471
Alignment:
Q  24 ttgacaaatagctatttattacataaaaaatgatcgttaatttataaaattatgaag 80  Q
    |||| |||||| |||||||| |||||||||| |||||||||||||||||||||||||    
T  3763415 ttgataaatagttatttatttcataaaaaataatcgttaatttataaaattatgaag 3763471  T

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Target: chr4; HSP #35
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 53 - 97
Target Start/End: Original strand, 5340300 - 5340344
Alignment:
Q  53 atgatcgttaatttataaaattatgaagcaggagtacccgtacac 97  Q
    |||||||||||||||||||||||||||||||||||||| ||||||    
T  5340300 atgatcgttaatttataaaattatgaagcaggagtaccggtacac 5340344  T

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Target: chr4; HSP #36
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 24 - 72
Target Start/End: Original strand, 43147792 - 43147840
Alignment:
Q  24 ttgacaaatagctatttattacataaaaaatgatcgttaatttataaaa 72  Q
    |||||||||| ||||||| ||||||||||||||||||||||||||||||    
T  43147792 ttgacaaataactatttactacataaaaaatgatcgttaatttataaaa 43147840  T

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Target: chr4; HSP #37
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 29 - 89
Target Start/End: Original strand, 43363636 - 43363695
Alignment:
Q  29 aaatagctatttattacataaaaaatgatcgttaatttataaaattatgaagcaggagtac 89  Q
    ||||| ||||||||| ||||||| |||||||||||||||||||||||||||| ||||||||    
T  43363636 aaataactatttatttcataaaa-atgatcgttaatttataaaattatgaagtaggagtac 43363695  T

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Target: chr4; HSP #38
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 24 - 80
Target Start/End: Original strand, 50607987 - 50608043
Alignment:
Q  24 ttgacaaatagctatttattacataaaaaatgatcgttaatttataaaattatgaag 80  Q
    |||| |||||| |||||||| ||||||||||||| ||||||||||||||||||||||    
T  50607987 ttgataaatagttatttatttcataaaaaatgattgttaatttataaaattatgaag 50608043  T

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Target: chr4; HSP #39
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 24 - 79
Target Start/End: Original strand, 50776074 - 50776129
Alignment:
Q  24 ttgacaaatagctatttattacataaaaaatgatcgttaatttataaaattatgaa 79  Q
    ||||||||||  |||||||| ||||||||||||| |||||||||||||||||||||    
T  50776074 ttgacaaataattatttatttcataaaaaatgattgttaatttataaaattatgaa 50776129  T

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Target: chr4; HSP #40
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 24 - 97
Target Start/End: Original strand, 32570671 - 32570742
Alignment:
Q  24 ttgacaaatagctatttattacataaaaaatgatcgttaatttataaaattatgaagcaggagtacccgtacac 97  Q
    |||||||||| ||||||||| |||||||  |||||||||||||||||| |||||||| | ||||||| ||||||    
T  32570671 ttgacaaatacctatttatttcataaaa--tgatcgttaatttataaatttatgaagtaagagtaccggtacac 32570742  T

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Target: chr4; HSP #41
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 24 - 97
Target Start/End: Complemental strand, 52607672 - 52607599
Alignment:
Q  24 ttgacaaatagctatttattacataaaaaatgatcgttaatttataaaattatgaagcaggagtacccgtacac 97  Q
    ||||||||||| |||||| || ||||||||| || ||||||||||||||||| || ||| ||||||| ||||||    
T  52607672 ttgacaaatagttatttactagataaaaaataattgttaatttataaaattaagatgcaagagtaccggtacac 52607599  T

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Target: chr4; HSP #42
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 24 - 80
Target Start/End: Original strand, 583072 - 583128
Alignment:
Q  24 ttgacaaatagctatttattacataaaaaatgatcgttaatttataaaattatgaag 80  Q
    |||||||||| ||||||| |||||||||||| |||||| ||||||||||||| ||||    
T  583072 ttgacaaataactatttactacataaaaaataatcgttcatttataaaattaagaag 583128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 24 - 66
Target Start/End: Complemental strand, 50498431 - 50498389
Alignment:
Q  24 ttgacaaatagctatttattacataaaaaatgatcgttaattt 66  Q
    |||||||||||||||||| |||||||||||| |||||||||||    
T  50498431 ttgacaaatagctatttactacataaaaaataatcgttaattt 50498389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 24 - 97
Target Start/End: Original strand, 29582268 - 29582341
Alignment:
Q  24 ttgacaaatagctatttattacataaaaaatgatcgttaatttataaaattatgaagcaggagtacccgtacac 97  Q
    ||||||||||||||||||||||| ||||||  ||  || |||||||||||||||||| |  |||||| ||||||    
T  29582268 ttgacaaatagctatttattacacaaaaaagaataatttatttataaaattatgaaggaaaagtaccggtacac 29582341  T

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Target: chr4; HSP #45
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 24 - 80
Target Start/End: Original strand, 48262865 - 48262919
Alignment:
Q  24 ttgacaaatagctatttattacataaaaaatgatcgttaatttataaaattatgaag 80  Q
    |||||||||| ||||||||| |||||||  |||||||||||||||||| ||||||||    
T  48262865 ttgacaaatatctatttatttcataaaa--tgatcgttaatttataaatttatgaag 48262919  T

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Target: chr4; HSP #46
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 36 - 96
Target Start/End: Complemental strand, 23058857 - 23058797
Alignment:
Q  36 tatttattacataaaaaatgatcgttaatttataaaattatgaagcaggagtacccgtaca 96  Q
    ||||| |||||| |||||||||||||||||| ||||| ||||||||  ||||||| |||||    
T  23058857 tatttcttacatgaaaaatgatcgttaatttgtaaaagtatgaagcgagagtaccggtaca 23058797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 50 - 97
Target Start/End: Original strand, 22077693 - 22077740
Alignment:
Q  50 aaaatgatcgttaatttataaaattatgaagcaggagtacccgtacac 97  Q
    |||||||||||||| ||||||| || ||||||||||||||| ||||||    
T  22077693 aaaatgatcgttaaattataaatttttgaagcaggagtaccggtacac 22077740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 30 - 97
Target Start/End: Complemental strand, 34936652 - 34936586
Alignment:
Q  30 aatagctatttattacataaaaaatgatcgttaatttataaaattatgaagcaggagtacccgtacac 97  Q
    ||||||||||| ||||||||||| |||||||||| ||||  | ||||||| |||||||||| ||||||    
T  34936652 aatagctattttttacataaaaa-tgatcgttaacttattgatttatgaaacaggagtaccggtacac 34936586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 24 - 79
Target Start/End: Complemental strand, 56104505 - 56104451
Alignment:
Q  24 ttgacaaatagctatttattacataaaaaatgatcgttaatttataaaattatgaa 79  Q
    |||| ||||| |||||| |||||| |||| ||||||||||||||||||||||||||    
T  56104505 ttgaaaaatatctatttcttacatgaaaa-tgatcgttaatttataaaattatgaa 56104451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 97
Target Start/End: Complemental strand, 6807089 - 6807018
Alignment:
Q  24 ttgacaaatagctatttattacataaaaaatgatcgttaatttataaaattatgaagcaggagtacccgtacac 97  Q
    |||||||||| ||| ||||| |||||||  |||| ||||||||||||| ||||| | |||||||| ||||||||    
T  6807089 ttgacaaataactacttatttcataaaa--tgattgttaatttataaatttatgtatcaggagtatccgtacac 6807018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 97
Target Start/End: Complemental strand, 25607793 - 25607722
Alignment:
Q  24 ttgacaaatagctatttattacataaaaaatgatcgttaatttataaaattatgaagcaggagtacccgtacac 97  Q
    |||||||||| ||||||||| ||||||| |  |||||||||||||||| ||||||||   ||||||| ||||||    
T  25607793 ttgacaaatacctatttatttcataaaata--atcgttaatttataaatttatgaagtgagagtaccggtacac 25607722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 27 - 97
Target Start/End: Original strand, 36091364 - 36091433
Alignment:
Q  27 acaaatagctatttattacataaaaaatgatcgttaatttataaaattatgaagcaggagtacccgtacac 97  Q
    |||||||||| |||||| |||||||| |||| ||||||||||||| || ||||| | ||||||| ||||||    
T  36091364 acaaatagctttttatttcataaaaa-tgatagttaatttataaatttttgaagtaagagtaccggtacac 36091433  T

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Target: scaffold1319 (Bit Score: 55; Significance: 9e-23; HSPs: 1)
Name: scaffold1319
Description:

Target: scaffold1319; HSP #1
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 24 - 90
Target Start/End: Complemental strand, 147 - 81
Alignment:
Q  24 ttgacaaatagctatttattacataaaaaatgatcgttaatttataaaattatgaagcaggagtacc 90  Q
    |||||||||||||||||| ||||||||||||||||||| ||||||||||||| ||||||||||||||    
T  147 ttgacaaatagctatttactacataaaaaatgatcgttcatttataaaattaagaagcaggagtacc 81  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0432 (Bit Score: 49; Significance: 3e-19; HSPs: 1)
Name: scaffold0432
Description:

Target: scaffold0432; HSP #1
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 22 - 90
Target Start/End: Complemental strand, 3134 - 3067
Alignment:
Q  22 ttttgacaaatagctatttattacataaaaaatgatcgttaatttataaaattatgaagcaggagtacc 90  Q
    |||||||||||||||||| ||||||||||||||||||||| | |||||||||||||||| |||||||||    
T  3134 ttttgacaaatagctattaattacataaaaaatgatcgttca-ttataaaattatgaagtaggagtacc 3067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0923 (Bit Score: 48; Significance: 1e-18; HSPs: 1)
Name: scaffold0923
Description:

Target: scaffold0923; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 38 - 97
Target Start/End: Original strand, 1 - 60
Alignment:
Q  38 tttattacataaaaaatgatcgttaatttataaaattatgaagcaggagtacccgtacac 97  Q
    ||||||||||||||| | ||||||||||||||||||||||||||||||||||| ||||||    
T  1 tttattacataaaaagttatcgttaatttataaaattatgaagcaggagtaccggtacac 60  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0308 (Bit Score: 44; Significance: 3e-16; HSPs: 1)
Name: scaffold0308
Description:

Target: scaffold0308; HSP #1
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 27 - 90
Target Start/End: Original strand, 7509 - 7572
Alignment:
Q  27 acaaatagctatttattacataaaaaatgatcgttaatttataaaattatgaagcaggagtacc 90  Q
    ||||||||||||||| ||||||||||||||||||| ||||||||||||| |||| | |||||||    
T  7509 acaaatagctatttactacataaaaaatgatcgttcatttataaaattaagaaggaagagtacc 7572  T

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Target: scaffold0005 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 24 - 88
Target Start/End: Complemental strand, 271073 - 271010
Alignment:
Q  24 ttgacaaatagctatttattacataaaaaatgatcgttaatttataaaattatgaagcaggagta 88  Q
    |||||||||| || |||||| |||||||| |||||||||||||||||| |||| ||||| |||||    
T  271073 ttgacaaataactctttatttcataaaaa-tgatcgttaatttataaatttataaagcaagagta 271010  T

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Target: scaffold0271 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0271
Description:

Target: scaffold0271; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 49 - 97
Target Start/End: Original strand, 16987 - 17035
Alignment:
Q  49 aaaaatgatcgttaatttataaaattatgaagcaggagtacccgtacac 97  Q
    ||||||||||||||||| ||||| |||||||| ||||||| | ||||||    
T  16987 aaaaatgatcgttaattgataaatttatgaagtaggagtatcggtacac 17035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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