View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15395_low_7 (Length: 510)
Name: NF15395_low_7
Description: NF15395
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15395_low_7 |
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Alignment Details
Target: chr7 (Bit Score: 435; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 435; E-Value: 0
Query Start/End: Original strand, 18 - 496
Target Start/End: Original strand, 9956452 - 9956930
Alignment:
| Q |
18 |
tgcacaaatccaatatgtgcgacacaaagtgatctaagatcacgaaggcactgattgtgcacgactcaaatccaaggcgtcctcataagcacatgcatat |
117 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |
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| T |
9956452 |
tgcacaaatccaatatgtgcgacacaaagtgatctaagatcacgaaggcactgattgtgcacgactcaaatccaaggcgtcctcataatcacatgcatat |
9956551 |
T |
|
| Q |
118 |
aaagcccaatacatagaagcccaatatagacaaattcacatccttctcgaggaagcaccgtgaaggtgaatgtaaagcttcgtacgcgtcaccacacatg |
217 |
Q |
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|||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
9956552 |
aaagcccaatacatagaagcccaataaagacaaattcacatccttctcgaggaagcaccgtgaaggtgaatgtaaagcttcgtacgcgtcaccacacatg |
9956651 |
T |
|
| Q |
218 |
agcgcattcagatctatcctccctgttcagaacatctttaacggcctctaggattcacgataggaaacctagagacggttaacgctctcctcattgatat |
317 |
Q |
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|||||||||||||||||||| | |||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
9956652 |
agcgcattcagatctatccttcttgttcataacatctttaacggcctcttggattcacgataggaaacctagagacggttaacgctctcctcattgatat |
9956751 |
T |
|
| Q |
318 |
aagcttgactcaacatcacgctcaggtacactttcattaaaacaactttcgcgtacataaaccacattttttatacactaatttgagcgttggaaagttt |
417 |
Q |
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|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |
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| T |
9956752 |
aagcttgactcaacatcacgctcaagtacactttcattaaaacaactttcgcgtacataaaccacattttttatacactaatttgagcgttggaaagctt |
9956851 |
T |
|
| Q |
418 |
gctcccctccaccccgaagcaccgtgaaccactaccatggcaattgcagttcccggaaattcaccactgcaactctctg |
496 |
Q |
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||||||||||||||||||||||||||| |||||||||| ||||||||| |||||||||||||||||||||||||||||| |
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| T |
9956852 |
gctcccctccaccccgaagcaccgtgagccactaccatagcaattgcatttcccggaaattcaccactgcaactctctg |
9956930 |
T |
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