View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15396_high_19 (Length: 264)
Name: NF15396_high_19
Description: NF15396
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15396_high_19 |
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Alignment Details
Target: chr1 (Bit Score: 206; Significance: 1e-113; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 206; E-Value: 1e-113
Query Start/End: Original strand, 15 - 224
Target Start/End: Complemental strand, 6138009 - 6137800
Alignment:
| Q |
15 |
aaacacaactgcacaaacacactttcactatgcctattcctaagtcttgattagacgtttctgatgccactgaaattccaaatcctggtcacttttagta |
114 |
Q |
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| T |
6138009 |
aaacacaactgcacaaacacactttcactatgcctattcctaagtcttgattagacgtttctgatgccactgaaattccaaatcctggtcacttttagta |
6137910 |
T |
|
| Q |
115 |
gtttctaatttgtttggcagcccctagtgttgctagctagattccatggtactttataagttaatggaaataacaattaatgtacaattcaatgtcacat |
214 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |
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| T |
6137909 |
gtttctaatttgtttggcagcccctagtgttgctagctagattccatggtactttataagttattggaaataacaattaatgtacaattcaatgtcacat |
6137810 |
T |
|
| Q |
215 |
tcacatttct |
224 |
Q |
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|||||||||| |
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| T |
6137809 |
tcacatttct |
6137800 |
T |
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