View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15396_high_21 (Length: 240)
Name: NF15396_high_21
Description: NF15396
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15396_high_21 |
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Alignment Details
Target: chr1 (Bit Score: 162; Significance: 1e-86; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 162; E-Value: 1e-86
Query Start/End: Original strand, 13 - 219
Target Start/End: Complemental strand, 7007540 - 7007322
Alignment:
| Q |
13 |
tgaatcagagaaaggtagccaatttgggttgggaacaggtttggccgtgggtgctggagcaggtttggctgtggg------------tggaattggtgca |
100 |
Q |
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| T |
7007540 |
tgaatcagagaaaggtagccaatttgggttgggaacaggtttggccgtgggtgctggagcaggtttggctgtgggagttgttgtgggtggaattggtgca |
7007441 |
T |
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| Q |
101 |
cttgcattagagaaggacaacgaagctgagaaagtggagaaggattcgtactatgagcatgaagtgtaccatcatgaagttgagagtgatgcctactatg |
200 |
Q |
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| T |
7007440 |
cttgcattagggaaggatgaggaagctgagaaagtggagaaggattcgtactatgagcatgaagtgtaccatcatgaagttgagagtgatgcctactatg |
7007341 |
T |
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| Q |
201 |
agcatgttgaggaggcatc |
219 |
Q |
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| T |
7007340 |
agcatgttgaggaggcatc |
7007322 |
T |
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