View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15396_high_23 (Length: 235)
Name: NF15396_high_23
Description: NF15396
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15396_high_23 |
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Alignment Details
Target: chr7 (Bit Score: 189; Significance: 1e-102; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 18 - 218
Target Start/End: Original strand, 25248168 - 25248368
Alignment:
| Q |
18 |
atgaagtgtggaaaagaaatcatgcattaactgcaaggcatgcttatgaatgtgtgaaagaggcttttggtggggctaatagaaagagtgtgaagaaggc |
117 |
Q |
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| T |
25248168 |
atgaagtgtggaaaagaaatcatgcattaactgcaaggcatgcttatgaatgtgtgaaagaggcttttggtggggctaatagaaagagtgtgaagagggc |
25248267 |
T |
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| Q |
118 |
tgtaatacatatggatccaattcaagacaaatgacttgataatggaccttgacccatgcaccagatcatgctttcttagggaaattaatacagtacatct |
217 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||| |
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| T |
25248268 |
tgtaatacatatggatccaattcaagacaaatgacttgataatggaccttgacccatgcagcagatcatgctttcttagggaaatcaatacagtacatct |
25248367 |
T |
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| Q |
218 |
t |
218 |
Q |
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| T |
25248368 |
t |
25248368 |
T |
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