View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF15396_low_18 (Length: 347)

Name: NF15396_low_18
Description: NF15396
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF15396_low_18
NF15396_low_18
[»] chr4 (63 HSPs)
chr4 (92-337)||(12075635-12075880)
chr4 (95-328)||(42907742-42907974)
chr4 (92-336)||(21956818-21957061)
chr4 (89-331)||(9929168-9929410)
chr4 (92-331)||(25940992-25941229)
chr4 (92-326)||(8843809-8844042)
chr4 (92-326)||(8856773-8857006)
chr4 (182-331)||(33616209-33616358)
chr4 (113-336)||(33516097-33516321)
chr4 (165-336)||(25265224-25265394)
chr4 (170-336)||(7334267-7334431)
chr4 (122-336)||(35304550-35304764)
chr4 (144-329)||(9280945-9281130)
chr4 (92-330)||(21713979-21714217)
chr4 (89-330)||(25298834-25299074)
chr4 (92-312)||(36918995-36919214)
chr4 (182-329)||(17113097-17113243)
chr4 (105-281)||(36306687-36306863)
chr4 (92-336)||(39086000-39086248)
chr4 (170-330)||(37926414-37926572)
chr4 (92-226)||(4741220-4741353)
chr4 (43-193)||(5902569-5902719)
chr4 (92-201)||(19883060-19883169)
chr4 (89-194)||(32596185-32596290)
chr4 (187-328)||(3505121-3505264)
chr4 (89-192)||(14605926-14606029)
chr4 (95-194)||(47550360-47550459)
chr4 (88-158)||(21544604-21544674)
chr4 (88-329)||(23927641-23927879)
chr4 (89-174)||(31782622-31782707)
chr4 (89-193)||(1724311-1724415)
chr4 (43-193)||(11122818-11122974)
chr4 (58-194)||(19534444-19534580)
chr4 (58-174)||(11028082-11028204)
chr4 (95-174)||(15733533-15733612)
chr4 (106-217)||(43553412-43553523)
chr4 (98-192)||(1866559-1866653)
chr4 (190-331)||(30034526-30034667)
chr4 (182-232)||(40420679-40420729)
chr4 (90-158)||(29527837-29527905)
chr4 (92-136)||(43309530-43309574)
chr4 (89-192)||(10574420-10574523)
chr4 (92-158)||(26564856-26564922)
chr4 (100-158)||(37107436-37107494)
chr4 (182-232)||(50376445-50376495)
chr4 (89-138)||(11173018-11173067)
chr4 (129-226)||(12505571-12505668)
chr4 (76-157)||(32585515-32585596)
chr4 (105-193)||(6382289-6382377)
chr4 (89-193)||(7608960-7609064)
chr4 (92-136)||(12825465-12825509)
chr4 (89-193)||(44317525-44317629)
chr4 (98-158)||(48459506-48459566)
chr4 (89-136)||(3737823-3737870)
chr4 (98-136)||(19548947-19548985)
chr4 (152-325)||(37384131-37384303)
chr4 (106-192)||(45065240-45065326)
chr4 (105-158)||(31415948-31416001)
chr4 (89-158)||(47103763-47103832)
chr4 (296-336)||(4652607-4652647)
chr4 (106-226)||(16575069-16575189)
chr4 (89-193)||(21423851-21423955)
chr4 (92-124)||(37349171-37349203)
[»] chr8 (40 HSPs)
chr8 (99-326)||(28345342-28345569)
chr8 (106-326)||(30903895-30904117)
chr8 (92-330)||(29918454-29918692)
chr8 (58-326)||(5700207-5700469)
chr8 (92-329)||(8545352-8545589)
chr8 (58-331)||(27777161-27777441)
chr8 (46-336)||(6388467-6388752)
chr8 (59-330)||(17084077-17084350)
chr8 (177-336)||(36274884-36275042)
chr8 (100-225)||(39379591-39379714)
chr8 (93-226)||(12468223-12468355)
chr8 (89-180)||(17469252-17469343)
chr8 (88-202)||(14186295-14186409)
chr8 (93-254)||(17108299-17108460)
chr8 (92-194)||(15173883-15173985)
chr8 (39-158)||(34777085-34777204)
chr8 (98-173)||(43113635-43113710)
chr8 (104-262)||(9476028-9476186)
chr8 (92-218)||(14155491-14155617)
chr8 (93-198)||(14687378-14687483)
chr8 (92-201)||(30481424-30481533)
chr8 (89-158)||(45236084-45236153)
chr8 (166-325)||(5793437-5793596)
chr8 (58-158)||(24869987-24870093)
chr8 (100-166)||(35215547-35215613)
chr8 (58-155)||(11254978-11255074)
chr8 (89-194)||(39445576-39445681)
chr8 (89-173)||(1063511-1063595)
chr8 (92-180)||(37960965-37961053)
chr8 (89-136)||(5858652-5858699)
chr8 (89-136)||(9642351-9642398)
chr8 (92-186)||(1012610-1012703)
chr8 (89-226)||(27056555-27056693)
chr8 (89-171)||(27932419-27932501)
chr8 (89-158)||(20399611-20399680)
chr8 (89-193)||(32303045-32303149)
chr8 (88-192)||(36131916-36132020)
chr8 (105-192)||(2183622-2183709)
chr8 (292-329)||(14687342-14687379)
chr8 (89-158)||(29108822-29108891)
[»] chr1 (52 HSPs)
chr1 (98-336)||(42728953-42729191)
chr1 (92-336)||(13692486-13692715)
chr1 (90-329)||(39219107-39219346)
chr1 (113-321)||(36421623-36421831)
chr1 (99-247)||(48125693-48125841)
chr1 (99-330)||(16903369-16903602)
chr1 (99-336)||(25154837-25155074)
chr1 (92-244)||(33293534-33293675)
chr1 (106-330)||(8880296-8880520)
chr1 (160-336)||(25181045-25181222)
chr1 (53-180)||(44615433-44615566)
chr1 (53-180)||(44793003-44793136)
chr1 (83-336)||(41476946-41477199)
chr1 (144-256)||(23719525-23719636)
chr1 (92-218)||(13798198-13798324)
chr1 (105-330)||(5293421-5293651)
chr1 (89-194)||(19572512-19572617)
chr1 (92-192)||(35069892-35069992)
chr1 (111-254)||(5283615-5283758)
chr1 (91-226)||(47644862-47644996)
chr1 (92-194)||(29871288-29871390)
chr1 (58-136)||(10778530-10778614)
chr1 (158-247)||(43513098-43513187)
chr1 (89-194)||(51421842-51421947)
chr1 (89-193)||(12494995-12495099)
chr1 (88-136)||(16433166-16433214)
chr1 (89-193)||(28297919-28298023)
chr1 (89-193)||(49250773-49250877)
chr1 (89-164)||(45866185-45866260)
chr1 (43-194)||(24236709-24236866)
chr1 (92-194)||(34085219-34085321)
chr1 (209-330)||(45460163-45460285)
chr1 (98-171)||(3627994-3628067)
chr1 (89-162)||(5181055-5181128)
chr1 (287-336)||(14902982-14903031)
chr1 (89-158)||(16408962-16409031)
chr1 (89-158)||(23058486-23058555)
chr1 (89-194)||(29936400-29936505)
chr1 (89-158)||(34673282-34673351)
chr1 (186-246)||(2581505-2581564)
chr1 (108-192)||(10450078-10450162)
chr1 (89-157)||(36187220-36187288)
chr1 (287-330)||(14891010-14891053)
chr1 (89-155)||(34060025-34060091)
chr1 (92-162)||(35936832-35936902)
chr1 (90-128)||(49098330-49098368)
chr1 (83-136)||(18354074-18354127)
chr1 (89-158)||(23490771-23490840)
chr1 (89-194)||(40087464-40087568)
chr1 (95-136)||(42707843-42707884)
chr1 (89-137)||(23968620-23968668)
chr1 (98-154)||(24710871-24710927)
[»] chr2 (40 HSPs)
chr2 (89-336)||(25210219-25210466)
chr2 (90-326)||(35248386-35248618)
chr2 (88-330)||(35965182-35965424)
chr2 (99-336)||(34544320-34544558)
chr2 (92-336)||(34214660-34214903)
chr2 (107-329)||(30696773-30696995)
chr2 (194-326)||(31600873-31601005)
chr2 (166-312)||(13954611-13954757)
chr2 (166-312)||(14095818-14095964)
chr2 (91-192)||(43371539-43371640)
chr2 (183-336)||(29656829-29656983)
chr2 (93-202)||(44746113-44746222)
chr2 (98-336)||(40359188-40359424)
chr2 (100-194)||(8915948-8916042)
chr2 (184-254)||(13531873-13531943)
chr2 (88-193)||(6027888-6027993)
chr2 (98-193)||(24414141-24414236)
chr2 (182-336)||(35409247-35409399)
chr2 (89-192)||(38342519-38342622)
chr2 (117-205)||(4961479-4961567)
chr2 (89-136)||(15546786-15546833)
chr2 (88-226)||(17845390-17845529)
chr2 (89-136)||(22900836-22900883)
chr2 (98-156)||(12193836-12193894)
chr2 (89-155)||(37106715-37106781)
chr2 (76-194)||(37999467-37999585)
chr2 (93-158)||(3547186-3547251)
chr2 (89-158)||(13705361-13705430)
chr2 (296-336)||(4961609-4961649)
chr2 (89-193)||(9632371-9632475)
chr2 (43-136)||(37472707-37472806)
chr2 (95-203)||(45256798-45256906)
chr2 (89-180)||(30846944-30847035)
chr2 (213-268)||(40734707-40734762)
chr2 (107-158)||(44057903-44057954)
chr2 (95-154)||(45115582-45115641)
chr2 (89-162)||(35409167-35409240)
chr2 (122-281)||(11958912-11959071)
chr2 (93-157)||(12285775-12285838)
chr2 (83-127)||(30978976-30979020)
[»] chr5 (34 HSPs)
chr5 (92-336)||(40187661-40187904)
chr5 (91-330)||(27900404-27900641)
chr5 (92-330)||(17153016-17153254)
chr5 (105-328)||(29664820-29665043)
chr5 (92-230)||(16311297-16311435)
chr5 (92-336)||(38972763-38973007)
chr5 (182-329)||(24207538-24207682)
chr5 (88-254)||(12457440-12457606)
chr5 (98-323)||(18451895-18452120)
chr5 (96-281)||(8020511-8020696)
chr5 (129-330)||(7350448-7350649)
chr5 (113-194)||(35194014-35194095)
chr5 (17-117)||(457359-457458)
chr5 (91-221)||(32574941-32575071)
chr5 (182-331)||(35583963-35584111)
chr5 (39-254)||(6810081-6810290)
chr5 (101-194)||(8453386-8453480)
chr5 (182-247)||(457466-457531)
chr5 (58-194)||(35311805-35311938)
chr5 (89-162)||(4583134-4583207)
chr5 (89-202)||(38006470-38006583)
chr5 (99-163)||(33728012-33728076)
chr5 (89-156)||(12866552-12866619)
chr5 (58-194)||(18207002-18207143)
chr5 (99-158)||(28569032-28569091)
chr5 (89-194)||(4920809-4920914)
chr5 (89-194)||(5908689-5908794)
chr5 (89-162)||(29245952-29246025)
chr5 (105-157)||(15890226-15890278)
chr5 (170-310)||(16366529-16366671)
chr5 (89-158)||(23044992-23045061)
chr5 (89-129)||(2412727-2412767)
chr5 (99-155)||(12250992-12251048)
chr5 (92-192)||(12773825-12773925)
[»] chr3 (39 HSPs)
chr3 (92-336)||(27252409-27252649)
chr3 (107-309)||(30904834-30905035)
chr3 (92-226)||(4553142-4553275)
chr3 (168-329)||(37032177-37032336)
chr3 (88-336)||(27937572-27937827)
chr3 (182-336)||(26207128-26207279)
chr3 (73-193)||(23546926-23547046)
chr3 (89-179)||(39655273-39655363)
chr3 (92-218)||(42243346-42243472)
chr3 (87-193)||(44953433-44953539)
chr3 (89-194)||(53631887-53631992)
chr3 (93-325)||(3385860-3386092)
chr3 (89-193)||(4016044-4016148)
chr3 (89-325)||(3414537-3414769)
chr3 (92-162)||(19111749-19111819)
chr3 (92-158)||(34119675-34119741)
chr3 (100-192)||(40796148-40796240)
chr3 (126-328)||(772831-773032)
chr3 (89-151)||(49025706-49025768)
chr3 (89-142)||(2490340-2490393)
chr3 (66-136)||(30616252-30616328)
chr3 (89-194)||(44172609-44172714)
chr3 (89-194)||(44179309-44179414)
chr3 (89-154)||(48390817-48390882)
chr3 (89-194)||(49580047-49580152)
chr3 (89-158)||(52198174-52198243)
chr3 (89-180)||(29284333-29284424)
chr3 (100-171)||(29842314-29842385)
chr3 (183-246)||(40890278-40890340)
chr3 (89-180)||(44252744-44252835)
chr3 (58-124)||(831061-831127)
chr3 (104-194)||(42758357-42758447)
chr3 (92-158)||(54317163-54317229)
chr3 (89-158)||(4557305-4557374)
chr3 (89-194)||(22535841-22535946)
chr3 (95-136)||(43582618-43582659)
chr3 (89-158)||(52572628-52572697)
chr3 (92-136)||(35687494-35687538)
chr3 (287-327)||(40890214-40890254)
[»] chr6 (39 HSPs)
chr6 (93-324)||(9402442-9402672)
chr6 (98-336)||(34346014-34346261)
chr6 (91-328)||(8320797-8321034)
chr6 (92-235)||(256495-256639)
chr6 (99-326)||(20348916-20349142)
chr6 (114-324)||(1947817-1948026)
chr6 (89-226)||(13769023-13769160)
chr6 (182-328)||(2126714-2126860)
chr6 (89-158)||(28079696-28079765)
chr6 (98-194)||(32532523-32532619)
chr6 (109-336)||(10925463-10925690)
chr6 (58-193)||(32053072-32053207)
chr6 (88-218)||(32959820-32959949)
chr6 (73-163)||(34178313-34178403)
chr6 (91-180)||(14410857-14410946)
chr6 (88-192)||(29199884-29199988)
chr6 (92-196)||(29341237-29341341)
chr6 (92-174)||(18908896-18908978)
chr6 (89-194)||(27738755-27738860)
chr6 (89-194)||(32853827-32853932)
chr6 (89-193)||(14506070-14506174)
chr6 (292-336)||(29340761-29340805)
chr6 (87-158)||(21875647-21875718)
chr6 (88-186)||(7393886-7393984)
chr6 (89-174)||(5108931-5109016)
chr6 (89-194)||(24602856-24602961)
chr6 (89-158)||(27534703-27534772)
chr6 (89-193)||(5863383-5863487)
chr6 (100-136)||(9442471-9442507)
chr6 (98-194)||(11762428-11762524)
chr6 (182-226)||(14321818-14321862)
chr6 (292-336)||(29342114-29342158)
chr6 (177-244)||(34179096-34179164)
chr6 (89-180)||(2367323-2367414)
chr6 (98-137)||(7978595-7978634)
chr6 (92-194)||(12678097-12678199)
chr6 (89-203)||(16405410-16405524)
chr6 (89-174)||(10142518-10142603)
chr6 (98-154)||(15498347-15498403)
[»] chr7 (56 HSPs)
chr7 (188-326)||(11472811-11472949)
chr7 (89-300)||(23475263-23475475)
chr7 (89-336)||(3773915-3774162)
chr7 (89-329)||(3156936-3157176)
chr7 (89-336)||(23533604-23533852)
chr7 (89-324)||(19440010-19440246)
chr7 (177-324)||(31345384-31345531)
chr7 (88-247)||(43550416-43550574)
chr7 (77-247)||(29292637-29292809)
chr7 (92-336)||(37217850-37218095)
chr7 (89-174)||(18825872-18825957)
chr7 (73-194)||(27850310-27850431)
chr7 (170-247)||(36251011-36251088)
chr7 (90-254)||(4101470-4101634)
chr7 (89-171)||(3226946-3227028)
chr7 (99-157)||(10990871-10990929)
chr7 (89-194)||(3920526-3920631)
chr7 (66-247)||(24903352-24903532)
chr7 (89-193)||(45380096-45380200)
chr7 (89-180)||(12980379-12980470)
chr7 (89-192)||(32546182-32546285)
chr7 (92-154)||(42908044-42908106)
chr7 (89-178)||(26622955-26623044)
chr7 (89-158)||(45885765-45885834)
chr7 (58-179)||(16079016-16079143)
chr7 (92-132)||(29014955-29014995)
chr7 (58-158)||(41103680-41103780)
chr7 (98-158)||(44734366-44734426)
chr7 (98-193)||(18125237-18125332)
chr7 (89-156)||(18684000-18684067)
chr7 (89-156)||(22973414-22973481)
chr7 (93-136)||(33841124-33841167)
chr7 (92-158)||(5377109-5377175)
chr7 (89-158)||(7780032-7780101)
chr7 (89-158)||(10072490-10072559)
chr7 (89-194)||(16866157-16866262)
chr7 (88-157)||(24425405-24425474)
chr7 (92-193)||(27063127-27063228)
chr7 (89-158)||(30650655-30650724)
chr7 (104-204)||(29855468-29855567)
chr7 (98-158)||(39456024-39456084)
chr7 (182-270)||(40335733-40335821)
chr7 (67-192)||(44845107-44845238)
chr7 (92-131)||(673131-673170)
chr7 (190-325)||(6557827-6557962)
chr7 (89-124)||(44658467-44658502)
chr7 (105-180)||(48327447-48327522)
chr7 (92-158)||(10995837-10995903)
chr7 (100-154)||(24753192-24753246)
chr7 (74-164)||(45708850-45708940)
chr7 (89-158)||(26004474-26004543)
chr7 (101-194)||(46127195-46127288)
chr7 (98-158)||(21702683-21702743)
chr7 (89-193)||(35074459-35074563)
chr7 (92-136)||(37103130-37103174)
chr7 (95-135)||(39317042-39317082)
[»] scaffold0244 (1 HSPs)
scaffold0244 (182-336)||(4673-4827)
[»] scaffold0036 (1 HSPs)
scaffold0036 (89-193)||(33377-33481)
[»] scaffold0009 (1 HSPs)
scaffold0009 (91-205)||(107393-107507)
[»] scaffold1322 (1 HSPs)
scaffold1322 (182-329)||(960-1106)
[»] scaffold0005 (1 HSPs)
scaffold0005 (89-192)||(211349-211452)
[»] scaffold0264 (1 HSPs)
scaffold0264 (98-247)||(17464-17613)
[»] scaffold0198 (1 HSPs)
scaffold0198 (99-213)||(20749-20863)
[»] scaffold0519 (1 HSPs)
scaffold0519 (58-155)||(10319-10415)
[»] scaffold0022 (1 HSPs)
scaffold0022 (73-194)||(90580-90701)
[»] scaffold0184 (1 HSPs)
scaffold0184 (92-192)||(2954-3054)
[»] scaffold0013 (2 HSPs)
scaffold0013 (92-158)||(128124-128190)
scaffold0013 (99-158)||(105479-105538)
[»] scaffold0157 (1 HSPs)
scaffold0157 (129-226)||(14809-14906)
[»] scaffold0059 (1 HSPs)
scaffold0059 (99-162)||(70110-70173)
[»] scaffold0182 (1 HSPs)
scaffold0182 (94-164)||(16980-17050)


Alignment Details
Target: chr4 (Bit Score: 218; Significance: 1e-120; HSPs: 63)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 218; E-Value: 1e-120
Query Start/End: Original strand, 92 - 337
Target Start/End: Original strand, 12075635 - 12075880
Alignment:
Q  92 gtttgagtttttcccgatttcaaaacacgggtacgggacgggtaatagggagataggtacccaccccaaactcgtactcaaactcgtccggaatgtagaa 191  Q
    |||||||||||| || ||||||||||||||||||| ||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  12075635 gtttgagttttttccaatttcaaaacacgggtacgtgacaggtaatagggagatatgtacccaccccaaactcgtactcaaactcgtccggaatgtagaa 12075734  T
Q  192 aatcaatttattactcattttatataaatagaaaccaaaactctgaatcatttcacccacacagttagagtttcagttttttagatgacatccacttatt 291  Q
    |||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12075735 aatcaatttattacccattttatataaatagaaactaaaactctgaatcatttcacccacacagttagagtttcagttttttagatgacatccacttatt 12075834  T
Q  292 atagttctctcttttctccttctatatctcacactctcggtctctg 337  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  12075835 atagttctctcttttctccttctatatctcacactctcggtctctg 12075880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 95 - 328
Target Start/End: Complemental strand, 42907974 - 42907742
Alignment:
Q  95 tgagtttttcccgatttcaaaacacgggtacgggacgggtaatagggagataggtacccaccccaaactcgtactcaaactcgtccggaatgtagaaaat 194  Q
    ||||||||  |||| |||||||||||| ||||||||| ||||| |||| ||||||||||||||| | | | ||| ||||||||||| |||||||||||||    
T  42907974 tgagttttctccgaattcaaaacacggatacgggacgagtaatggggatataggtacccaccccgagcccatacccaaactcgtcccgaatgtagaaaat 42907875  T
Q  195 caatttattactcattttatataaatagaaaccaaaactctgaatcatttcacccacacagttagagtttcagttttttagatgacatccacttattata 294  Q
    ||||||| ||||| ||||||||||||||||||  |||| || ||||||||||| || ||||||||||| | ||| ||| ||||||||  ||||||| |||    
T  42907874 caatttactactc-ttttatataaatagaaactcaaaccctaaatcatttcactcatacagttagagtcttagtctttcagatgacacacacttatcata 42907776  T
Q  295 gttctctcttttctccttctatatctcacactct 328  Q
    ||||| ||||||||||||| ||||||||||||||    
T  42907775 gttctatcttttctccttccatatctcacactct 42907742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 92 - 336
Target Start/End: Original strand, 21956818 - 21957061
Alignment:
Q  92 gtttgagtttttcccgatttcaaaacacgggtacgggacgggtaatagggagataggtacccaccccaaactcgtactcaaactcgtccggaatgtagaa 191  Q
    ||||| |||||| ||||||| ||||||||||||||| | | ||||  |||| |||||| |||||||| ||| | ||| |||||||||   ||||||||||    
T  21956818 gtttgggttttttccgattttaaaacacgggtacggaatgagtaacggggatataggtgcccaccccgaacccatacccaaactcgttacgaatgtagaa 21956917  T
Q  192 aatcaatttattactcattttatataaatagaaaccaaaactctgaatcatttcacccacacagttagagtttcagttttttagatgacatccacttatt 291  Q
    |||||||||||||| | ||||||||||||| ||||| |||| || ||||||||||  | |||||| ||||| ||||| ||||||||||||  || ||||     
T  21956918 aatcaatttattaccc-ttttatataaataaaaacccaaaccctaaatcatttcattcgcacagtcagagtgtcagtcttttagatgacactcatttatc 21957016  T
Q  292 atagttctctcttttctccttctatatctcacactctcggtctct 336  Q
    |||||| | ||||||||||||| |||||||||||| || ||||||    
T  21957017 atagttatatcttttctccttccatatctcacactatcagtctct 21957061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 89 - 331
Target Start/End: Original strand, 9929168 - 9929410
Alignment:
Q  89 tgggtttgagtttttcccgatttcaaaacacgggtacgggacgggtaatagggagataggtacccaccccaaactcgtactcaaactcgtccggaatgta 188  Q
    ||||| ||||||||||| |||||||||| |||||||  | |||||||| | ||| ||||||||||||||| ||||| ||| |||| |||||| ||| |||    
T  9929168 tgggtatgagtttttcctgatttcaaaatacgggtatagtacgggtaacatggatataggtacccaccccgaactcttacccaaaatcgtcctgaaagta 9929267  T
Q  189 gaaaatcaatttattactcattttatataaatagaaaccaaaactctgaatcatttcacccacacagttagagtttcagttttttagatgacatccactt 288  Q
    |||||||||||||||||   ||  ||||||||| ||||  ||||||| ||| ||||||| |||||||| ||||| || || |||||||| |||  |||||    
T  9929268 gaaaatcaatttattacctcttccatataaatataaactgaaactctaaataatttcactcacacagtcagagtctcggtcttttagataacaatcactt 9929367  T
Q  289 attatagttctctcttttctccttctatatctcacactctcgg 331  Q
    || ||||||||||||| |||| ||| || ||||||||| ||||    
T  9929368 atcatagttctctcttatctcattcaatctctcacactatcgg 9929410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 92 - 331
Target Start/End: Complemental strand, 25941229 - 25940992
Alignment:
Q  92 gtttgagtttttcccgatttcaaaacacgggtacgggacgggtaatagggagataggtacccaccccaaactcgtactcaaactcgtccggaatgtagaa 191  Q
    ||||| ||||||||||||||||||||||||||||||||| |||||  || ||||||||||||||||| ||| | ||| |||||  |||  | ||||||||    
T  25941229 gtttgggtttttcccgatttcaaaacacgggtacgggacaggtaacgggaagataggtacccaccccgaacccatacccaaacatgtctcggatgtagaa 25941130  T
Q  192 aatcaatttattactcattttatataaatagaaaccaaaactctgaatcatttcacccacacagttagagtttcagttttttagatgacatccacttatt 291  Q
    ||||||||||| || | ||||||||||||||||||| ||   || ||||| ||||| |||||  | | ||| | ||| ||| ||||||||| |||||||     
T  25941129 aatcaatttataaccccttttatataaatagaaacccaaggcctaaatcaattcactcacacgatcatagtcttagtctttcagatgacattcacttatc 25941030  T
Q  292 atagttctctcttttctccttctatatctcacactctcgg 331  Q
    |||||  ||| ||||||||||| | |||| ||||||||||    
T  25941029 atagt--tctattttctccttccaaatcttacactctcgg 25940992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 92 - 326
Target Start/End: Original strand, 8843809 - 8844042
Alignment:
Q  92 gtttgagtttttcccgatttcaaaacacgggtacgggacgggtaatagggagataggtacccaccccaaactcgtactcaaactcgtccggaatgtagaa 191  Q
    |||||| ||||||||||||| ||||||| ||| |||||||||||   |||| |||| ||||||||| || ||| ||| ||||| ||||  ||||||||||    
T  8843809 gtttgaatttttcccgattttaaaacacaggtgcgggacgggtagcggggatatagatacccacccgaa-ctcatacccaaacccgtcgtgaatgtagaa 8843907  T
Q  192 aatcaatttattactcattttatataaatagaaaccaaaactctgaatcatttcacccacacagttagagtttcagttttttagatgacatccacttatt 291  Q
    ||| |||||||||| | ||| ||||||||||||||  |||  || ||||||||||| |||||||| | ||| | ||  ||| ||||||||  |||||||     
T  8843908 aattaatttattacccctttcatataaatagaaacttaaatcctaaatcatttcactcacacagtcacagtcttagactttcagatgacactcacttatc 8844007  T
Q  292 atagttctctcttttctccttctatatctcacact 326  Q
    |||||||||||||||||||||| ||  ||||||||    
T  8844008 atagttctctcttttctccttccatgcctcacact 8844042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 92 - 326
Target Start/End: Original strand, 8856773 - 8857006
Alignment:
Q  92 gtttgagtttttcccgatttcaaaacacgggtacgggacgggtaatagggagataggtacccaccccaaactcgtactcaaactcgtccggaatgtagaa 191  Q
    |||||| ||||||||||||| ||||||| ||| |||||||||||   |||| |||| ||||||||| || ||| ||| ||||| ||||  ||||||||||    
T  8856773 gtttgaatttttcccgattttaaaacacaggtgcgggacgggtagcggggatatagatacccacccgaa-ctcatacccaaacccgtcgtgaatgtagaa 8856871  T
Q  192 aatcaatttattactcattttatataaatagaaaccaaaactctgaatcatttcacccacacagttagagtttcagttttttagatgacatccacttatt 291  Q
    ||| |||||||||| | ||| ||||||||||||||  |||  || ||||||||||| |||||||| | ||| | ||  ||| ||||||||  |||||||     
T  8856872 aattaatttattacccctttcatataaatagaaacttaaatcctaaatcatttcactcacacagtcacagtcttagactttcagatgacactcacttatc 8856971  T
Q  292 atagttctctcttttctccttctatatctcacact 326  Q
    |||||||||||||||||||||| ||  ||||||||    
T  8856972 atagttctctcttttctccttccatgcctcacact 8857006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 182 - 331
Target Start/End: Original strand, 33616209 - 33616358
Alignment:
Q  182 gaatgtagaaaatcaatttattactcattttatataaatagaaaccaaaactctgaatcatttcacccacacagttagagtttcagttttttagatgaca 281  Q
    |||||||||||||||||||||||| | ||||||||||||| ||| |||||| || ||||||||||| |||||||| ||||| | | | ||| | ||||||    
T  33616209 gaatgtagaaaatcaatttattaccccttttatataaataaaaatcaaaaccctaaatcatttcactcacacagtcagagtcttaatatttcatatgaca 33616308  T
Q  282 tccacttattatagttctctcttttctccttctatatctcacactctcgg 331  Q
      ||||||| ||||||||||||||||||| || |||||||||||||||||    
T  33616309 ctcacttatcatagttctctcttttctccatccatatctcacactctcgg 33616358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 113 - 336
Target Start/End: Original strand, 33516097 - 33516321
Alignment:
Q  113 aaaacacgggtacgggacgggtaatagggagataggtacccaccccaaactcgtactcaaactcgtccggaatgtagaaaatcaatttattactcatttt 212  Q
    |||||||||||||| || |||||| ||||| ||| ||||||||||| |||   ||| ||||| ||||   |||||| ||||||||| |||||| | ||||    
T  33516097 aaaacacgggtacgagatgggtaacagggatataagtacccaccccgaacctatacccaaacccgtctcaaatgtaaaaaatcaatgtattacccctttt 33516196  T
Q  213 atataaatagaaaccaaaactctgaatcatttcacccacaca-gttagagtttcagttttttagatgacatccacttattatagttctctcttttctcct 311  Q
    ||||||||| ||||  |||| || ||||||||||| |||||  |||||||| |  || ||| ||||||||  ||||||| ||| ||||||||||||||||    
T  33516197 atataaataaaaactcaaaccctaaatcatttcactcacacccgttagagtcttggtctttcagatgacactcacttatcataattctctcttttctcct 33516296  T
Q  312 tctatatctcacactctcggtctct 336  Q
    ||||||| ||||||||| |||||||    
T  33516297 tctatatatcacactctaggtctct 33516321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 165 - 336
Target Start/End: Original strand, 25265224 - 25265394
Alignment:
Q  165 gtactcaaactcgtccggaatgtagaaaatcaatttattactcattttatataaatagaaaccaaaactctgaatcatttcacccacacagttagagttt 264  Q
    |||||||||||| ||  ||||||||||||||||||||||| || || |||||||||||||||  ||| ||| |||||||| || |||||| | ||||| |    
T  25265224 gtactcaaactcatctcgaatgtagaaaatcaatttatta-tccttctatataaatagaaactcaaattctaaatcattttactcacacaatcagagtct 25265322  T
Q  265 cagttttttagatgacatccacttattatagttctctcttttctccttctatatctcacactctcggtctct 336  Q
    || ||||| ||||||||  | ||||| |||||||||||||||||||||| |||||||||||| |||| ||||    
T  25265323 caatttttcagatgacagtcgcttatcatagttctctcttttctccttccatatctcacactttcggcctct 25265394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 170 - 336
Target Start/End: Original strand, 7334267 - 7334431
Alignment:
Q  170 caaactcgtccggaatgtagaaaatcaatttattactcattttatataaatagaaaccaaaactctgaatcatttcacccacacagttagagtttcagtt 269  Q
    |||||||||||  ||||| |||||||||||||||| || |||| |||||||||||||  ||||||| ||||||||||| |||||||||| ||| |||||     
T  7334267 caaactcgtcccaaatgttgaaaatcaatttatta-tcgtttt-tataaatagaaactcaaactctaaatcatttcactcacacagttaaagtctcagtc 7334364  T
Q  270 ttttagatgacatccacttattatagttctctcttttctccttctatatctcacactctcggtctct 336  Q
    |||||| ||||||  | |||| ||| |||||||||||||||||| |||||||||| |||||| ||||    
T  7334365 ttttagttgacatttatttatcataattctctcttttctccttccatatctcacaatctcggcctct 7334431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 122 - 336
Target Start/End: Original strand, 35304550 - 35304764
Alignment:
Q  122 gtacgggacgggtaatagggagataggtacccaccccaaactcgtactcaaactcgtc-cggaatgtagaaaatcaatttattactcattttatataaat 220  Q
    |||||||||||||||  |||| ||||||||| ||||||||||| ||| ||||||| ||   |||||||| ||||||||||||||| | |||||||||||     
T  35304550 gtacgggacgggtaacggggatataggtacctaccccaaactcatacccaaactcatcaaagaatgtaggaaatcaatttattac-ccttttatataaaa 35304648  T
Q  221 agaaaccaaaactctgaatcatttcacccacacagttagagtttcagttttttagatgacatccacttattatagttctctcttttctccttctatatct 320  Q
    ||||||  ||||||| |||||||||||||||| ||   |||| ||||| ||| || |||    |||||||   |||||||| ||||||||||| ||||||    
T  35304649 agaaactcaaactctaaatcatttcacccacagagccggagtctcagtctttcaggtgatgatcacttatcgcagttctcttttttctccttccatatct 35304748  T
Q  321 cacactctcggtctct 336  Q
    ||||||||||| ||||    
T  35304749 cacactctcggcctct 35304764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 144 - 329
Target Start/End: Original strand, 9280945 - 9281130
Alignment:
Q  144 ataggtacccaccccaaactcgtactcaaactcgtccggaatgtagaaaatcaatttattactcattttatataaatagaaaccaaaactctgaatcatt 243  Q
    ||||||||||||||| ||||| |||||||||| |||| |||| |||||||| |||||||||  | ||||||||| |||||||   |||| || |||||||    
T  9280945 ataggtacccaccccgaactcatactcaaacttgtcctgaatatagaaaataaatttattatcccttttatatagatagaaattcaaaccctaaatcatt 9281044  T
Q  244 tcacccacacagttagagtttcagttttttagatgacatccacttattatagttctctcttttctccttctatatctcacactctc 329  Q
     ||   ||| | ||||||| ||| | ||| |||| |||| ||||||| ||||| |||||||||||||||| |||||||||||||||    
T  9281045 acattgacaaaattagagtctcaatctttcagataacattcacttatcatagtactctcttttctccttccatatctcacactctc 9281130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 92 - 330
Target Start/End: Original strand, 21713979 - 21714217
Alignment:
Q  92 gtttgagtttttcccgatttcaaaacacgggtacgggacgggtaatagggagataggtacccaccccaaactcgtactcaaactcgtccggaatgtagaa 191  Q
    |||||| |||||| |||||| |||||| | ||||| || ||||||| | |  ||| |||||||||| |||||| |||  |||||||||   |||||||||    
T  21713979 gtttgaatttttctcgattttaaaacatgagtacgtgatgggtaatcgaggtatatgtacccaccctaaactcatacctaaactcgtctcaaatgtagaa 21714078  T
Q  192 aatcaatttattactcattttatataaatagaaaccaaaactctgaatcatttcacccacacagttagagtttcagttttttagatgacatccacttatt 291  Q
    ||| ||||||||||   ||||||||||||||||||  |||| || |||||||||||  ||||| ||||||| ||||| | | | ||||||  ||||| |     
T  21714079 aattaatttattacctcttttatataaatagaaactcaaaccctaaatcatttcacttacacaattagagtctcagtctctcaaatgacactcacttctc 21714178  T
Q  292 atagttctctcttttctccttctatatctcacactctcg 330  Q
    |||||||||||||||||| ||   ||||||||| |||||    
T  21714179 atagttctctcttttctcttttcgtatctcacattctcg 21714217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 89 - 330
Target Start/End: Original strand, 25298834 - 25299074
Alignment:
Q  89 tgggtttgagtttttcccgatttcaaaacacgggtacgggacgggtaatagggagataggtacccaccccaaactcgtactcaaactcgtccggaatgta 188  Q
    |||||||| |||||||| ||||||||||||||||||||||| ||||||| |||| |||| |  ||||||| ||| | ||| ||||| ||| |  |||||     
T  25298834 tgggtttgggtttttccggatttcaaaacacgggtacgggatgggtaatggggatatagctgtccaccccgaacccatacccaaacccgtaccaaatgtt 25298933  T
Q  189 gaaaatcaatttattactcattttatataaatagaaaccaaaactctgaatcatttcacccacacagttagagtttcagttttttagatgacatccactt 288  Q
    |||||||||||||| || | |||| ||||||||| |||  ||||||| ||||||||||| || |  ||||||||  || | ||| || |||||   | ||    
T  25298934 gaaaatcaatttatcaccccttttttataaatag-aactcaaactctaaatcatttcactcataacgttagagtcgcaatctttcagttgacacttattt 25299032  T
Q  289 attatagttctctcttttctccttctatatctcacactctcg 330  Q
    || ||| || ||||||||||||||| |||||||||| |||||    
T  25299033 atcataattttctcttttctccttccatatctcacaatctcg 25299074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 92 - 312
Target Start/End: Complemental strand, 36919214 - 36918995
Alignment:
Q  92 gtttgagtttttcccgatttcaaaacacgggtacgggacgggtaatagggagataggtacccaccccaaactcgtactcaaactcgtccggaatgtagaa 191  Q
    ||||||||||| ||||| || |||||| | |||  ||||| ||||   ||| ||||||| ||| ||  ||| | ||| ||||||||| | | ||||||||    
T  36919214 gtttgagttttccccgactttaaaacatgtgtataggacgagtaacgtggatataggtatccatccttaacccatacccaaactcgttccggatgtagaa 36919115  T
Q  192 aatcaatttattactcattttatataaatagaaaccaaaactctgaatcatttcacccacacagttagagtttcagttttttagatgacatccacttatt 291  Q
    ||||| ||||||||   ||||||||||||||||||  ||||||| ||||||||||| ||||||| |||||| ||||  ||| ||||||||||||||| |     
T  36919114 aatcagtttattaccacttttatataaatagaaactcaaactctaaatcatttcactcacacag-tagagtctcagactttcagatgacatccacttgtc 36919016  T
Q  292 atagttctctcttttctcctt 312  Q
    ||| |||||| ||||||||||    
T  36919015 atatttctcttttttctcctt 36918995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 182 - 329
Target Start/End: Original strand, 17113097 - 17113243
Alignment:
Q  182 gaatgtagaaaatcaatttattactcattttatataaatagaaaccaaaactctgaatcatttcacccacacagttagagtttcagttttttagatgaca 281  Q
    |||||||||||||||||||||||||| ||| ||||||||| ||||| |||   | ||||||||||| | || ||| ||||| ||||| ||| ||||||||    
T  17113097 gaatgtagaaaatcaatttattactc-tttcatataaataaaaacccaaatcttaaatcatttcactcccaaagtcagagtctcagtctttcagatgaca 17113195  T
Q  282 tccacttattatagttctctcttttctccttctatatctcacactctc 329  Q
      ||||||| |||||| |||||||| |||||| |||||||||||||||    
T  17113196 ctcacttatcatagttatctcttttttccttccatatctcacactctc 17113243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 105 - 281
Target Start/End: Complemental strand, 36306863 - 36306687
Alignment:
Q  105 ccgatttcaaaacacgggtacgggacgggtaatagggagataggtacccaccccaaactcgtactcaaactcgtccggaatgtagaaaatcaatttatta 204  Q
    |||||||||||||||||||| | ||||| |||  |||| ||||||||| | ||| ||     |||||||| ||||| |||||||||||||||||||||||    
T  36306863 ccgatttcaaaacacgggtatgagacggttaacggggatataggtacctaacccgaagctacactcaaacccgtcccgaatgtagaaaatcaatttatta 36306764  T
Q  205 ctcattttatataaatagaaaccaaaactctgaatcatttcacccacacagttagagtttcagttttttagatgaca 281  Q
    | | ||||||||||||||||| | |||   | |||||||||||  ||||| ||||||| ||||| ||| ||||||||    
T  36306763 ccccttttatataaatagaaatcgaaatcataaatcatttcacttacacaattagagtctcagtctttgagatgaca 36306687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 92 - 336
Target Start/End: Complemental strand, 39086248 - 39086000
Alignment:
Q  92 gtttgagtttttcccgatttcaaaacacgggtacgggacgggtaatagggagataggtacccaccccaaactcgtactcaaactcg--tccggaatgtag 189  Q
    |||||||||||  ||||||||| |||| |||| ||| ||||||||  |||| ||||||||| ||    ||||| |||||||||||   ||   || ||||    
T  39086248 gtttgagttttctccgatttcacaacatgggtgcggtacgggtaacggggatataggtacctacagtgaactcatactcaaactctcatcacaaaagtag 39086149  T
Q  190 aaaatcaatttattactcattttatataaatagaaaccaaaactctgaatcatttcacccacacagttagagtttcagttttttagatgacatccactta 289  Q
    |||||||||||| ||| | ||||||||||||||||||  |||| || ||||||||||| |||||||| ||| | ||||||||| ||||||||   |||||    
T  39086148 aaaatcaatttactac-ctttttatataaatagaaacttaaaccctaaatcatttcactcacacagtcagactctcagtttttcagatgacacttactta 39086050  T
Q  290 ttatagttc---tctcttttctccttctatatctcacactctcggtctct 336  Q
    | |||||||   | | ||||||||||| ||| ||||||||||| ||||||    
T  39086049 tcatagttctttttttttttctccttccatagctcacactctcagtctct 39086000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 170 - 330
Target Start/End: Complemental strand, 37926572 - 37926414
Alignment:
Q  170 caaactcgtccggaatgtagaaaatcaatttattactcattttatataaatagaaaccaaaactctgaatcatttcacccacacagttagagtttcagtt 269  Q
    ||||||| ||| |||||||| |||| |||||||||  | ||| |||| ||| |||||  ||||| | |||||||| || |||||||||| ||| |||||     
T  37926572 caaactcatcctgaatgtagtaaattaatttattatccctttcatatcaattgaaactcaaactttaaatcatttaactcacacagttaaagtctcagtc 37926473  T
Q  270 ttttagatgacatccacttattatagttctctcttttctccttctatatctcacactctcg 330  Q
    |||  |||||||  ||||||| |||||||||| ||||||||||| ||||||||||||||||    
T  37926472 ttt--gatgacagtcacttatcatagttctctattttctccttccatatctcacactctcg 37926414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 92 - 226
Target Start/End: Original strand, 4741220 - 4741353
Alignment:
Q  92 gtttgagtttttcccgatttcaaaacacgggtacgggacgggtaatagggagataggtacccaccccaaactcgtactcaaactcgtccggaatgtagaa 191  Q
    ||||||||||| | |||||| |||||| ||||| ||||||| ||| ||||| ||| ||||||||||| ||| | |||  |||| ||| | |||||||  |    
T  4741220 gtttgagttttcctcgattttaaaacatgggtatgggacggataacagggatataagtacccaccccgaacccatacaaaaacccgttccgaatgta-ta 4741318  T
Q  192 aatcaatttattactcattttatataaatagaaac 226  Q
    |||||||||||||  ||||||||||||||||||||    
T  4741319 aatcaatttattatccattttatataaatagaaac 4741353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 43 - 193
Target Start/End: Original strand, 5902569 - 5902719
Alignment:
Q  43 ccgaatcaatctcactttgacgtgttttttccgttttgactgaatttgggtttgagtttttcccgatttcaaaacacgggtacgggacgggtaataggga 142  Q
    ||||| ||| |||| ||||||| |||||  ||||||||||||  ||||||| || ||||| |||||| || ||||||||||| |||||||||||  || |    
T  5902569 ccgaaccaaactcaatttgacgggttttccccgttttgactgggtttgggtatgggttttccccgatctcgaaacacgggtatgggacgggtaacgggta 5902668  T
Q  143 gataggtacccaccccaaactcgtactcaaactcgtccggaatgtagaaaa 193  Q
     ||||||||||||||| ||| | ||| ||||| |||||  |||||| ||||    
T  5902669 tataggtacccaccccgaacccatacccaaacccgtcccaaatgtaaaaaa 5902719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 92 - 201
Target Start/End: Original strand, 19883060 - 19883169
Alignment:
Q  92 gtttgagtttttcccgatttcaaaacacgggtacgggacgggtaatagggagataggtacccaccccaaactcgtactcaaactcgtccggaatgtagaa 191  Q
    ||||| ||||| |||||||| ||||||||| ||||||| ||||||  |||| ||||||| ||||||| |||   ||| ||||||||||| ||||||| ||    
T  19883060 gtttgggttttccccgattttaaaacacggatacgggaagggtaacggggatataggtatccaccccgaaccgatacacaaactcgtcccgaatgtataa 19883159  T
Q  192 aatcaattta 201  Q
    ||||||||||    
T  19883160 aatcaattta 19883169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 89 - 194
Target Start/End: Original strand, 32596185 - 32596290
Alignment:
Q  89 tgggtttgagtttttcccgatttcaaaacacgggtacgggacgggtaatagggagataggtacccaccccaaactcgtactcaaactcgtccggaatgta 188  Q
    |||||| | ||||| ||||||||||||||||||||| |||||||||||  || | |||||| |||||| ||||||| ||| |||||| |||  |||||||    
T  32596185 tgggttggggttttccccgatttcaaaacacgggtatgggacgggtaacgggtatataggtccccacctcaaactcatacccaaacttgtctcgaatgta 32596284  T
Q  189 gaaaat 194  Q
    ||||||    
T  32596285 gaaaat 32596290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 187 - 328
Target Start/End: Complemental strand, 3505264 - 3505121
Alignment:
Q  187 tagaaaatcaatttattactcattttatataaatagaaaccaaaactctgaatcatttcacccacacagttagagtttcagttttttagatgacatccac 286  Q
    ||||||||||||||||||||| |||||| ||||||||||   |||||||  |||||||||  ||||| |||||||| ||| | | | | ||||||  |||    
T  3505264 tagaaaatcaatttattactccttttatctaaatagaaattcaaactctagatcatttcattcacaccgttagagtctcaatctctcatatgacactcac 3505165  T
Q  287 ttattatagt--tctctcttttctccttctatatctcacactct 328  Q
    || ||| |||  ||||||| ||||||||| ||||||||||||||    
T  3505164 ttcttagagttctctctctcttctccttccatatctcacactct 3505121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 89 - 192
Target Start/End: Original strand, 14605926 - 14606029
Alignment:
Q  89 tgggtttgagtttttcccgatttcaaaacacgggtacgggacgggtaatagggagataggtacccaccccaaactcgtactcaaactcgtccggaatgta 188  Q
    |||||||| |||||  |||||||||||| ||||||||| ||||||||| ||||| ||| ||||||||||| ||| | ||| |||||||  || |||||||    
T  14605926 tgggtttgggttttctccgatttcaaaatacgggtacgagacgggtaacagggatatatgtacccaccccgaacccatacccaaactctacctgaatgta 14606025  T
Q  189 gaaa 192  Q
    ||||    
T  14606026 gaaa 14606029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 95 - 194
Target Start/End: Original strand, 47550360 - 47550459
Alignment:
Q  95 tgagtttttcccgatttcaaaacacgggtacgggacgggtaatagggagataggtacccaccccaaactcgtactcaaactcgtccggaatgtagaaaat 194  Q
    |||||||| |||||| |||||||||||||| ||||||||||| ||| | ||||||||||||||| ||| | ||| ||||| |||||  |||||| |||||    
T  47550360 tgagttttccccgatctcaaaacacgggtatgggacgggtaacaggtatataggtacccaccccgaacccatacccaaacccgtcccaaatgtaaaaaat 47550459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 88 - 158
Target Start/End: Complemental strand, 21544674 - 21544604
Alignment:
Q  88 ttgggtttgagtttttcccgatttcaaaacacgggtacgggacgggtaatagggagataggtacccacccc 158  Q
    |||||||||  |||||||||||||||||| ||||||||||||| |||||| |||| ||| |||||||||||    
T  21544674 ttgggtttggatttttcccgatttcaaaatacgggtacgggacaggtaatggggatatatgtacccacccc 21544604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 88 - 329
Target Start/End: Original strand, 23927641 - 23927879
Alignment:
Q  88 ttgggtttgagtttttcccgatttcaaaacacgggtacgggacgggtaatagggagataggtacccaccccaaactcgtactcaaactcgtccggaatgt 187  Q
    ||||||||||||||| | ||||||||||||||  ||||  ||||| ||| | ||| ||||||| ||||||| ||| | ||| ||||||| ||  |||| |    
T  23927641 ttgggtttgagttttgctcgatttcaaaacacaagtacaagacggttaacatggatataggtatccaccccgaacccctacccaaactcatctcgaat-t 23927739  T
Q  188 agaaaatcaatttattactcattttatataaatagaaaccaaaactctgaatcatttcacccacacagttagagtttcagttttttagatgacatccact 287  Q
    ||||||| ||||||||||   |||  |||||||  ||| | ||||  | ||| ||||||| |||||| ||||| | ||| |||||  |||||||  ||||    
T  23927740 agaaaattaatttattacctctttattataaat--aaatccaaaccataaataatttcactcacacacttagaatctcaatttttcggatgacaatcact 23927837  T
Q  288 tattatagttctctcttttctccttctatatctcacactctc 329  Q
    ||  ||| |||||||||||||| ||| |||||| ||||||||    
T  23927838 taacataattctctcttttctcattccatatcttacactctc 23927879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 89 - 174
Target Start/End: Complemental strand, 31782707 - 31782622
Alignment:
Q  89 tgggtttgagtttttcccgatttcaaaacacgggtacgggacgggtaatagggagataggtacccaccccaaactcgtactcaaac 174  Q
    |||||||| ||||| ||||||||||||| |||||||||| || |||||  |||| ||| ||||||||||||||||| ||| |||||    
T  31782707 tgggtttgggttttccccgatttcaaaatacgggtacggtacaggtaacggggatatatgtacccaccccaaactcatacccaaac 31782622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 89 - 193
Target Start/End: Original strand, 1724311 - 1724415
Alignment:
Q  89 tgggtttgagtttttcccgatttcaaaacacgggtacgggacgggtaatagggagataggtacccaccccaaactcgtactcaaactcgtccggaatgta 188  Q
    |||||||| ||||| ||||||||||||||| ||||| |||||||||||  |  | ||||||||||||||| ||| | ||| ||||| ||||| ||||| |    
T  1724311 tgggtttgggttttccccgatttcaaaacatgggtatgggacgggtaacggttatataggtacccaccccgaacccatacccaaacccgtcccgaatgca 1724410  T
Q  189 gaaaa 193  Q
    |||||    
T  1724411 gaaaa 1724415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 43 - 193
Target Start/End: Original strand, 11122818 - 11122974
Alignment:
Q  43 ccgaatcaatctcactttgacgtgttttttccgttttgactgaatttgggtttgagt-----ttttc-ccgatttcaaaacacgggtacgggacgggtaa 136  Q
    ||||| ||| |||| |||||||  ||||||||||||||||||| ||||||| || ||     ||||| ||||| || ||||||||||| |||||||||||    
T  11122818 ccgaaccaaactcaatttgacggattttttccgttttgactgagtttgggtatgggtatgggttttctccgatctcgaaacacgggtatgggacgggtaa 11122917  T
Q  137 tagggagataggtacccaccccaaactcgtactcaaactcgtccggaatgtagaaaa 193  Q
      || | ||||||||||||||| ||| | ||||||||| |||||  |||||| ||||    
T  11122918 cgggtatataggtacccaccccgaacccatactcaaacccgtcccaaatgtaaaaaa 11122974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 58 - 194
Target Start/End: Complemental strand, 19534580 - 19534444
Alignment:
Q  58 tttgacgtgttttttccgttttgactgaatttgggtttgagtttttcccgatttcaaaacacgggtacgggacgggtaatagggagataggtacccaccc 157  Q
    ||||||| ||||| |||||||| | ||  ||||||| ||||||||  ||||||| ||||   ||||| ||||||||||| ||| | |||||||||||||     
T  19534580 tttgacgggttttctccgttttcattgggtttgggtatgagttttctccgattttaaaatctgggtatgggacgggtaacaggtatataggtacccacct 19534481  T
Q  158 caaactcgtactcaaactcgtccggaatgtagaaaat 194  Q
    | ||||| ||| ||||| ||||  |||||||||||||    
T  19534480 cgaactcatacccaaacccgtcacgaatgtagaaaat 19534444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 58 - 174
Target Start/End: Complemental strand, 11028204 - 11028082
Alignment:
Q  58 tttgacgtgttttttccgttttgactgaatttgggtttgagt------ttttcccgatttcaaaacacgggtacgggacgggtaatagggagataggtac 151  Q
    ||||||| ||||| ||||||||||||| |||||||| || ||      ||| |||||| |||||||||||||| |||||||||||  || | ||||||||    
T  11028204 tttgacgggttttctccgttttgactggatttgggtatgggtatgggttttccccgatctcaaaacacgggtatgggacgggtaacgggtatataggtac 11028105  T
Q  152 ccaccccaaactcgtactcaaac 174  Q
    ||||||| ||||| ||| |||||    
T  11028104 ccaccccgaactcatacccaaac 11028082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 95 - 174
Target Start/End: Original strand, 15733533 - 15733612
Alignment:
Q  95 tgagtttttcccgatttcaaaacacgggtacgggacgggtaatagggagataggtacccaccccaaactcgtactcaaac 174  Q
    |||||||| | ||||||||||| ||||||||| |||||||||  | || ||| ||||||||||| |||||||||||||||    
T  15733533 tgagttttcctcgatttcaaaatacgggtacgagacgggtaacggagatatatgtacccaccccgaactcgtactcaaac 15733612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 106 - 217
Target Start/End: Complemental strand, 43553523 - 43553412
Alignment:
Q  106 cgatttcaaaacacgggtacgggacgggtaatagggagataggtacccaccccaaactcgtactcaaactcgtccggaatgtagaaaatcaatttattac 205  Q
    ||||||||||||||||||| |||||| | |||| | | ||||  | ||||||| ||||| ||   |||||||||| |||||| |||||||||||||||||    
T  43553523 cgatttcaaaacacgggtatgggacgagcaatatgaatatagacatccaccccgaactcatatcgaaactcgtcccgaatgttgaaaatcaatttattac 43553424  T
Q  206 tcattttatata 217  Q
     | |||||||||    
T  43553423 cccttttatata 43553412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 98 - 192
Target Start/End: Original strand, 1866559 - 1866653
Alignment:
Q  98 gtttttcccgatttcaaaacacgggtacgggacgggtaatagggagataggtacccaccccaaactcgtactcaaactcgtccggaatgtagaaa 192  Q
    ||||||||||||||||||| ||||||||| ||||||||||  ||| ||| ||| ||||||| ||| | ||| |||||||  || |||||||||||    
T  1866559 gtttttcccgatttcaaaatacgggtacgagacgggtaatgcggatatatgtatccaccccgaacccatacccaaactctacccgaatgtagaaa 1866653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 190 - 331
Target Start/End: Complemental strand, 30034667 - 30034526
Alignment:
Q  190 aaaatcaatttattac-tcattttatataaatagaaaccaaaactctgaatcatttcacccacacagttagagtttcagttttttagatgacatccactt 288  Q
    |||||||||||| ||| |||||| ||||||||||||||| |||| || ||||||||||| || | ||| |||||  || | ||| |  |||||  | |||    
T  30034667 aaaatcaatttactacctcattt-atataaatagaaacccaaaccctaaatcatttcactcataaagtgagagtcacaatctttcaagtgacactcgctt 30034569  T
Q  289 attatagttctctcttttctccttctatatctcacactctcgg 331  Q
    || |||||| ||||||||||||||| |||||||||||| ||||    
T  30034568 atcatagttttctcttttctccttccatatctcacactttcgg 30034526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 182 - 232
Target Start/End: Original strand, 40420679 - 40420729
Alignment:
Q  182 gaatgtagaaaatcaatttattactcattttatataaatagaaaccaaaac 232  Q
    ||||||||||||||| |||||||| | ||||||||||||||||||||||||    
T  40420679 gaatgtagaaaatcactttattaccccttttatataaatagaaaccaaaac 40420729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 90 - 158
Target Start/End: Complemental strand, 29527905 - 29527837
Alignment:
Q  90 gggtttgagtttttcccgatttcaaaacacgggtacgggacgggtaatagggagataggtacccacccc 158  Q
    ||||||| ||||| ||||||||||||| ||||||||| |||||||||  |||| ||| |||||||||||    
T  29527905 gggtttgggttttccccgatttcaaaatacgggtacgtgacgggtaacggggatatatgtacccacccc 29527837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 92 - 136
Target Start/End: Complemental strand, 43309574 - 43309530
Alignment:
Q  92 gtttgagtttttcccgatttcaaaacacgggtacgggacgggtaa 136  Q
    ||||| ||||||||||||||||||||||||||| |||||||||||    
T  43309574 gtttgggtttttcccgatttcaaaacacgggtatgggacgggtaa 43309530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 89 - 192
Target Start/End: Original strand, 10574420 - 10574523
Alignment:
Q  89 tgggtttgagtttttcccgatttcaaaacacgggtacgggacgggtaatagggagataggtacccaccccaaactcgtactcaaactcgtccggaatgta 188  Q
    ||||||||| |||| |||||||||| || || ||||||||||||||||  |||| ||| |||||| |||| ||||| ||| ||||| |  || |||||||    
T  10574420 tgggtttgaattttccccgatttcataatacaggtacgggacgggtaacggggatatatgtacccgccccgaactcatacccaaaccctacccgaatgta 10574519  T
Q  189 gaaa 192  Q
    ||||    
T  10574520 gaaa 10574523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 92 - 158
Target Start/End: Complemental strand, 26564922 - 26564856
Alignment:
Q  92 gtttgagtttttcccgatttcaaaacacgggtacgggacgggtaatagggagataggtacccacccc 158  Q
    ||||||| ||| |||||||||||||| |||||| |||||||||||  || | |||||||||||||||    
T  26564922 gtttgagctttccccgatttcaaaacgcgggtatgggacgggtaacgggtatataggtacccacccc 26564856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 100 - 158
Target Start/End: Complemental strand, 37107494 - 37107436
Alignment:
Q  100 ttttcccgatttcaaaacacgggtacgggacgggtaatagggagataggtacccacccc 158  Q
    ||||||| ||||||||||||||||| |||||||||||  || | |||||||||||||||    
T  37107494 ttttcccaatttcaaaacacgggtatgggacgggtaacgggtatataggtacccacccc 37107436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 182 - 232
Target Start/End: Original strand, 50376445 - 50376495
Alignment:
Q  182 gaatgtagaaaatcaatttattactcattttatataaatagaaaccaaaac 232  Q
    ||||||||||||||||||||||   |||||||||||||||||||| |||||    
T  50376445 gaatgtagaaaatcaatttattttccattttatataaatagaaactaaaac 50376495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 89 - 138
Target Start/End: Complemental strand, 11173067 - 11173018
Alignment:
Q  89 tgggtttgagtttttcccgatttcaaaacacgggtacgggacgggtaata 138  Q
    |||||||| ||||| ||||||||||||| ||||||||||||| |||||||    
T  11173067 tgggtttgggttttccccgatttcaaaatacgggtacgggacaggtaata 11173018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 129 - 226
Target Start/End: Original strand, 12505571 - 12505668
Alignment:
Q  129 acgggtaatagggagataggtacccaccccaaactcgtactcaaactcgtccggaatgtagaaaatcaatttattactcattttatataaatagaaac 226  Q
    ||||||||| |||| ||  ||||||||||  ||||| ||| ||||| ||||| ||| ||| || ||||||||||| | | ||||||||||||||||||    
T  12505571 acgggtaatggggatattagtacccaccctgaactcatacccaaacccgtcctgaaggtaaaacatcaatttatttccccttttatataaatagaaac 12505668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 76 - 157
Target Start/End: Complemental strand, 32585596 - 32585515
Alignment:
Q  76 ttttgactgaatttgggtttgagtttttcccgatttcaaaacacgggtacgggacgggtaatagggagataggtacccaccc 157  Q
    |||||||||  ||||||| ||| ||||  |||||||||||||||||||| ||||| |||||  || | ||||||||||||||    
T  32585596 ttttgactgggtttgggtatgaattttctccgatttcaaaacacgggtatgggacaggtaacgggtatataggtacccaccc 32585515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 105 - 193
Target Start/End: Original strand, 6382289 - 6382377
Alignment:
Q  105 ccgatttcaaaacacgggtacgggacgggtaatagggagataggtacccaccccaaactcgtactcaaactcgtccggaatgtagaaaa 193  Q
    ||||| |||||||||||||| |||||||||||  || | ||||||||||||||| ||| | ||| ||||| |||||  |||||| ||||    
T  6382289 ccgatctcaaaacacgggtatgggacgggtaacgggtatataggtacccaccccgaacccatacccaaacccgtcccaaatgtaaaaaa 6382377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 89 - 193
Target Start/End: Complemental strand, 7609064 - 7608960
Alignment:
Q  89 tgggtttgagtttttcccgatttcaaaacacgggtacgggacgggtaatagggagataggtacccaccccaaactcgtactcaaactcgtccggaatgta 188  Q
    ||||| || ||||| |||||| || ||||||||||| |||||||||||  || | ||||||||||||||| ||| | ||| ||||| |||||  ||||||    
T  7609064 tgggtatgggttttccccgatctcgaaacacgggtatgggacgggtaacgggtatataggtacccaccccgaacccatacccaaacccgtcccaaatgta 7608965  T
Q  189 gaaaa 193  Q
     ||||    
T  7608964 aaaaa 7608960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 92 - 136
Target Start/End: Original strand, 12825465 - 12825509
Alignment:
Q  92 gtttgagtttttcccgatttcaaaacacgggtacgggacgggtaa 136  Q
    ||||| ||||| ||||||||||||||||||||| |||||||||||    
T  12825465 gtttgggttttccccgatttcaaaacacgggtatgggacgggtaa 12825509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 89 - 193
Target Start/End: Complemental strand, 44317629 - 44317525
Alignment:
Q  89 tgggtttgagtttttcccgatttcaaaacacgggtacgggacgggtaatagggagataggtacccaccccaaactcgtactcaaactcgtccggaatgta 188  Q
    ||||| || ||||| |||||| || ||||||||||| |||||||||||  || | ||||||||||||||| ||| | ||| ||||| |||||  ||||||    
T  44317629 tgggtatgggttttccccgatctcgaaacacgggtatgggacgggtaacgggtatataggtacccaccccgaacccatacccaaacccgtcccaaatgta 44317530  T
Q  189 gaaaa 193  Q
     ||||    
T  44317529 aaaaa 44317525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 98 - 158
Target Start/End: Complemental strand, 48459566 - 48459506
Alignment:
Q  98 gtttttcccgatttcaaaacacgggtacgggacgggtaatagggagataggtacccacccc 158  Q
    ||||| ||||||||||||||| ||||| || |||||||| ||| | |||||||||||||||    
T  48459566 gttttccccgatttcaaaacatgggtatggaacgggtaacaggtatataggtacccacccc 48459506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 89 - 136
Target Start/End: Complemental strand, 3737870 - 3737823
Alignment:
Q  89 tgggtttgagtttttcccgatttcaaaacacgggtacgggacgggtaa 136  Q
    |||||| | ||||||||| ||||||||||||||||| |||||||||||    
T  3737870 tgggttagggtttttcccaatttcaaaacacgggtatgggacgggtaa 3737823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 98 - 136
Target Start/End: Original strand, 19548947 - 19548985
Alignment:
Q  98 gtttttcccgatttcaaaacacgggtacgggacgggtaa 136  Q
    ||||| |||||||||||||||| ||||||||||||||||    
T  19548947 gttttccccgatttcaaaacacaggtacgggacgggtaa 19548985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 152 - 325
Target Start/End: Complemental strand, 37384303 - 37384131
Alignment:
Q  152 ccaccccaaactcgtactcaaactcgtccggaatgtagaaaatcaatttattactcattttatataaatagaaaccaaaactctgaatcatttcacccac 251  Q
    ||||||||||| | ||| ||||| |||||  ||| |||||| |||||||||||  | ||||||||||||||||    |||| || ||||||||||| |||    
T  37384303 ccaccccaaacccatacacaaacccgtcccaaatatagaaa-tcaatttattatcccttttatataaatagaagttcaaaccctaaatcatttcactcac 37384205  T
Q  252 acagttagagtttcagttttttagatgacatccacttattatagttctctct-tttctccttctatatctcacac 325  Q
    || |||| |||||| || ||| | || ||| ||||||||   | |||||||| ||| |||||| |||||||||||    
T  37384204 acggtta-agtttcggtctttcaaataacacccacttatctaatttctctctctttttccttccatatctcacac 37384131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 106 - 192
Target Start/End: Complemental strand, 45065326 - 45065240
Alignment:
Q  106 cgatttcaaaacacgggtacgggacgggtaatagggagataggtacccaccccaaactcgtactcaaactcgtccggaatgtagaaa 192  Q
    ||||||||||| |||||||||||||| |||| ||||| ||| ||||||| ||| ||| | ||| ||||| |  || |||||||||||    
T  45065326 cgatttcaaaatacgggtacgggacgagtaacagggatatatgtacccatcccgaacgcatacccaaaccctacccgaatgtagaaa 45065240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 105 - 158
Target Start/End: Original strand, 31415948 - 31416001
Alignment:
Q  105 ccgatttcaaaacacgggtacgggacgggtaatagggagataggtacccacccc 158  Q
    |||||||||||| |||||||||||| || ||| ||||| ||| |||||||||||    
T  31415948 ccgatttcaaaatacgggtacgggatggataacagggatatatgtacccacccc 31416001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 89 - 158
Target Start/End: Complemental strand, 47103832 - 47103763
Alignment:
Q  89 tgggtttgagtttttcccgatttcaaaacacgggtacgggacgggtaatagggagataggtacccacccc 158  Q
    |||||||| ||||| ||| ||||||||| ||||||||||| |||||||   ||| ||| |||||||||||    
T  47103832 tgggtttgggttttccccaatttcaaaatacgggtacggggcgggtaacgcggatatatgtacccacccc 47103763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 296 - 336
Target Start/End: Complemental strand, 4652647 - 4652607
Alignment:
Q  296 ttctctcttttctccttctatatctcacactctcggtctct 336  Q
    |||||||||||||||||  ||||||||||||||||| ||||    
T  4652647 ttctctcttttctccttgcatatctcacactctcggcctct 4652607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 106 - 226
Target Start/End: Complemental strand, 16575189 - 16575069
Alignment:
Q  106 cgatttcaaaacacgggtacgggacgggtaatagggagataggtacccaccccaaactcgtactcaaactcgtccggaatgtagaaaatcaatttattac 205  Q
    |||||| ||||| ||||||||||| || |||   ||| ||| |||||||| || |||   ||| ||||||||||   |||||| ||||| ||||||||||    
T  16575189 cgattttaaaacgcgggtacgggatggataacgaggatataagtacccactccgaacctatacccaaactcgtcttaaatgtaaaaaattaatttattac 16575090  T
Q  206 tcattttatataaatagaaac 226  Q
     | ||| ||||||||||||||    
T  16575089 ccttttaatataaatagaaac 16575069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 89 - 193
Target Start/End: Complemental strand, 21423955 - 21423851
Alignment:
Q  89 tgggtttgagtttttcccgatttcaaaacacgggtacgggacgggtaatagggagataggtacccaccccaaactcgtactcaaactcgtccggaatgta 188  Q
    ||||| || ||||| ||| || || ||||||||||| | |||||||||  || | ||||||||||||||||||| | ||| ||||| |||||  ||||||    
T  21423955 tgggtatgggttttccccaatctcgaaacacgggtatgagacgggtaacgggtatataggtacccaccccaaacccatacacaaacccgtcccaaatgta 21423856  T
Q  189 gaaaa 193  Q
     ||||    
T  21423855 aaaaa 21423851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 92 - 124
Target Start/End: Complemental strand, 37349203 - 37349171
Alignment:
Q  92 gtttgagtttttcccgatttcaaaacacgggta 124  Q
    ||||||||||| |||||||||||||||||||||    
T  37349203 gtttgagttttccccgatttcaaaacacgggta 37349171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 96; Significance: 5e-47; HSPs: 40)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 99 - 326
Target Start/End: Complemental strand, 28345569 - 28345342
Alignment:
Q  99 tttttcccgatttcaaaacacgggtacgggacgggtaatagggagataggtacccaccccaaactcgtactcaaactcgtccggaatgtagaaaatcaat 198  Q
    |||| ||||||| |||||||||||||| ||| ||||||   ||| ||||| ||||||||| ||| | ||| |||||| |||| ||||||||||||| |||    
T  28345569 ttttacccgattccaaaacacgggtacaggatgggtaacgaggatataggcacccaccccgaacccatacccaaacttgtcctgaatgtagaaaataaat 28345470  T
Q  199 ttattactcattttatataaatagaaaccaaaactctgaatcatttcacccacacagttagagtttcagttttttagatgacatccacttattatagttc 298  Q
     |||||| | ||||||||||||||||||| ||| ||| ||||||||||| |||||||| | ||| ||||| ||| ||||||||  ||||||| |||||||    
T  28345469 atattaccccttttatataaatagaaaccgaaattctaaatcatttcactcacacagtcatagtctcagtatttcagatgacactcacttatcatagttc 28345370  T
Q  299 tctcttttctccttctatatctcacact 326  Q
    |||||| |||||||| ||||||||||||    
T  28345369 tctcttatctccttccatatctcacact 28345342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 106 - 326
Target Start/End: Complemental strand, 30904117 - 30903895
Alignment:
Q  106 cgatttcaaaacacgggtacgggacgggtaatagggagataggtacccaccccaaactcgtactcaaactcgtccggaatgtagaaaatcaatttattac 205  Q
    ||||||||||||||||||||| |||||||||| | || ||| |||||||||||| || | ||| ||||   |||| ||||||||||||||||||||||||    
T  30904117 cgatttcaaaacacgggtacgagacgggtaatggagatataagtacccaccccatacccatacccaaatcagtcccgaatgtagaaaatcaatttattac 30904018  T
Q  206 tcattttatataaatagaaaccaaaactctgaatcatttcacccacacagt-tagagtttcagtttttt-agatgacatccacttattatagttctctct 303  Q
     ||||||||||||||||||||||||||  | ||||||||||| ||||||||  | ||| ||| |||||| | ||||||| || |||| |||||| |||||    
T  30904017 acattttatataaatagaaaccaaaaccttaaatcatttcactcacacagtcaaaagtctcaattttttcaaatgacattcatttatcatagttttctct 30903918  T
Q  304 tttctccttctatatctcacact 326  Q
    ||||||| | ||||||| |||||    
T  30903917 tttctccctatatatcttacact 30903895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 92 - 330
Target Start/End: Complemental strand, 29918692 - 29918454
Alignment:
Q  92 gtttgagtttttcccgatttcaaaacacgggtacgggacgggtaatagggagataggtacccaccccaaactcgtactcaaactcgtccggaatgtagaa 191  Q
    ||||||||||||||||||||||||||||  |||| | |||||||| |  || ||| ||||||||||| ||  | ||| ||||| |||||  |||||| ||    
T  29918692 gtttgagtttttcccgatttcaaaacacatgtacagaacgggtaacaaagatatatgtacccaccccgaaaccatacacaaacccgtcccaaatgtaaaa 29918593  T
Q  192 aatcaatttattactcattttatataaatagaaaccaaaactctgaatcatttcacccacacagttagagtttcagttttttagatgacatccacttatt 291  Q
    ||||||||||||||   ||||||||||||||||||  |||| || ||||||||||| |||||||||||||| ||| | ||| ||||||||   | ||||     
T  29918592 aatcaatttattacctcttttatataaatagaaactcaaaccctaaatcatttcactcacacagttagagtctcaatctttcagatgacacttagttatc 29918493  T
Q  292 atagttctctcttttctccttctatatctcacactctcg 330  Q
    |||||||| ||||||| ||||| |||||| |||||||||    
T  29918492 atagttctatcttttcgccttccatatcttacactctcg 29918454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 58 - 326
Target Start/End: Complemental strand, 5700469 - 5700207
Alignment:
Q  58 tttgacgtgttttttccgttttgactgaatttgggtttgagtttttcccgatttcaaaacacgggtacgggacgggtaatagggagataggtacccaccc 157  Q
    ||||||| |||||||||||||||||||      ||||| ||||||||||||||||||||||| |||| | ||| |||||  |||| |||| ||||||||     
T  5700469 tttgacgggttttttccgttttgactg------ggtttaagtttttcccgatttcaaaacacaggtatgagactggtaacggggatatagatacccacct 5700376  T
Q  158 caaactcgtactcaaactcgtccggaatgtagaaaatcaatttattactcattttatataaatagaaaccaaaactctgaatcatttcacccacacagtt 257  Q
    | ||| | ||| ||||  | ||| ||||||| ||||| ||||| |||| | |||||||||||| |||||| ||||||| ||||||||||| | || |||     
T  5700375 cgaacccatacccaaatccatcccgaatgtataaaattaattttttaccccttttatataaattgaaaccgaaactctaaatcatttcactcccatagtc 5700276  T
Q  258 agagtttcagttttttagatgacatccacttattatagttctctcttttctccttctatatctcacact 326  Q
    ||||| | ||| ||||||||||||  ||||||| ||| ||||||||| |||||||  ||||||||||||    
T  5700275 agagtcttagtcttttagatgacagtcacttatcataattctctcttatctcctttcatatctcacact 5700207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 92 - 329
Target Start/End: Original strand, 8545352 - 8545589
Alignment:
Q  92 gtttgagtttttcccgatttcaaaacacgggtacgggacgggtaatagggagataggtacccaccccaaactcgtactcaaactcgtccggaatgtagaa 191  Q
    ||||| |||||  |||||||||||||||||||| || ||| ||||  |||| |||| |||||||||| ||| | |||||||||||||||  |||||||||    
T  8545352 gtttgggttttctccgatttcaaaacacgggtatggaacgagtaacggggatatagatacccaccccgaacccatactcaaactcgtcccaaatgtagaa 8545451  T
Q  192 aatcaatttattactcattttatataaatagaaaccaaaactctgaatcatttcacccacacagttagagtttcagttttttagatgacatccacttatt 291  Q
    ||||||||||  |||| ||||||||||| ||||| | |||| || ||||||||||| || | ||  ||||| || || ||| | ||||||  |||||||     
T  8545452 aatcaatttacaactccttttatataaacagaaatccaaaccctaaatcatttcactcaaatagccagagtctcggtctttcaaatgacactcacttatc 8545551  T
Q  292 atagttctctcttttctccttctatatctcacactctc 329  Q
    ||| |||||||||||||||||| |||||||||| ||||    
T  8545552 ataattctctcttttctccttccatatctcacattctc 8545589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 58 - 331
Target Start/End: Original strand, 27777161 - 27777441
Alignment:
Q  58 tttgacgtgttttttccgttttgactgaatttgggt------ttgagtttttcccgatttcaaaacacgggtacgggacgggtaatagggagataggtac 151  Q
    ||||||| ||||| |||||||||||||  |||||||      |||||||||||||||||||||||||| |||||||||| ||||| || || | ||||||    
T  27777161 tttgacgggttttctccgttttgactgggtttgggtatgtgtttgagtttttcccgatttcaaaacacaggtacgggacaggtaacagagatacaggtac 27777260  T
Q  152 ccaccccaaactcgtactcaaactcgtccggaatgtagaaaatcaatttattactcatttta-tataaatagaaaccaaaactctgaatcatttcaccca 250  Q
    ||||||| ||| | ||| ||||||||  |   || || |||||||||||||||| | ||||  |||||||||||| | ||||||| |||||||| ||  |    
T  27777261 ccaccccgaacccatacccaaactcgctctacatatataaaatcaatttattacccctttttgtataaatagaaatctaaactctaaatcattttactta 27777360  T
Q  251 cacagttagagtttcagttttttagatgacatccacttattatagttctctcttttctccttctatatctcacactctcgg 331  Q
     |||||  |||||||||| ||| ||||||||  ||||||| ||||||| ||| |||||||||| | |||||||| ||||||    
T  27777361 aacagtctgagtttcagtatttcagatgacactcacttatcatagttcactcctttctccttcaaaatctcacaatctcgg 27777441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 46 - 336
Target Start/End: Original strand, 6388467 - 6388752
Alignment:
Q  46 aatcaatctcactttgacgtgttttttccgttttgactgaatttgggtttgagttt------ttcccgatttcaaaacacgggtacgggacgggtaatag 139  Q
    |||||| |||| ||||||| | ||| |||||||||||||| ||||||| || ||||      | |||||||| |||||||||||||  |||||||||  |    
T  6388467 aatcaaactcaatttgacgggctttctccgttttgactgagtttgggtatgggtttgggtcttccccgattttaaaacacgggtacaagacgggtaacgg 6388566  T
Q  140 ggagataggtacccaccccaaactcgtactcaaactcgtccggaatgtagaaaatcaatttattactcattttatataaatagaaaccaaaactctgaat 239  Q
    ||| |||||||||||           | ||||||| | ||| |||||||||||||||||||||||| ||||||||||||| ||||||| |||| || |||    
T  6388567 ggatataggtaccca-----------tgctcaaacccatcctgaatgtagaaaatcaatttattacccattttatataaacagaaacccaaaccctaaat 6388655  T
Q  240 catttcacccacacagttagagtttcagttttttagatgacatccacttattatagttctctcttttctccttctatatctcacactctcggtctct 336  Q
    |||||||| |||||| ||||||| ||||  ||| | ||||||  ||||||| ||||||||||  |||||||||| ||  ||||||||||||| ||||    
T  6388656 catttcactcacacaattagagtctcagactttaaaatgacactcacttatcatagttctcttctttctccttccatgcctcacactctcggcctct 6388752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 59 - 330
Target Start/End: Original strand, 17084077 - 17084350
Alignment:
Q  59 ttgacgtgttttttccgttttgactgaatttgggtttgagtttttcccgatttcaaaacacgggtacgggacgggtaatagggagataggtacccacccc 158  Q
    |||||| |||||  ||| ||||||||  ||| | |||| |||||  ||||||| |||||||||||||| |||||||||  |||| |||| ||||||||||    
T  17084077 ttgacgggttttccccgctttgactgggttttgatttgggttttctccgattttaaaacacgggtacgagacgggtaacggggatatagatacccacccc 17084176  T
Q  159 aaactcgtactcaaactcgtccggaatgt--agaaaatcaatttattactcattttatataaatagaaaccaaaactctgaatcatttcacccacacagt 256  Q
     ||||| ||  ||||| | ||  ||||||  | ||||||||||||||   | ||||||||||||| ||||| || | || ||| ||| | | |||||| |    
T  17084177 gaactcatatccaaacccatcacgaatgtaaaaaaaatcaatttattgtcctttttatataaatataaacccaagccctaaattattcccctcacacaat 17084276  T
Q  257 tagagtttcagttttttagatgacatccacttattatagttctctcttttctccttctatatctcacactctcg 330  Q
     ||||||||||| ||| | ||||||  ||||||| |||||| ||||||||||||||| |||| |||||||||||    
T  17084277 cagagtttcagtctttcatatgacaatcacttatcatagttatctcttttctccttccatatttcacactctcg 17084350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 177 - 336
Target Start/End: Complemental strand, 36275042 - 36274884
Alignment:
Q  177 gtccggaatgtagaaaatcaatttattactcattttatataaatagaaaccaaaactctgaatcatttcacccacacagttagagtttcagttttttaga 276  Q
    |||| ||||||| |||||||||||| ||  | ||||||||||||||||||| || | || ||||||||||| |||||||| | ||| || || ||| |||    
T  36275042 gtcccgaatgtaaaaaatcaatttactatcccttttatataaatagaaacccaacc-ctaaatcatttcactcacacagtcaaagtctcggtctttcaga 36274944  T
Q  277 tgacatccacttattatagttctctcttttctccttctatatctcacactctcggtctct 336  Q
    |||||  ||||||| ||||| ||| |||||||||||| |||||||||||||| |||||||    
T  36274943 tgacactcacttatcatagtcctcccttttctccttccatatctcacactctaggtctct 36274884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 100 - 225
Target Start/End: Original strand, 39379591 - 39379714
Alignment:
Q  100 ttttcccgatttcaaaacacgggtacgggacgggtaatagggagataggtacccaccccaaactcgtactcaaactcgtccggaatgtagaaaatcaatt 199  Q
    |||||||||| |||||||||||||||||||||||||||  ||| | | ||||||| ||| ||||| ||||||||||||||| |||||||| |||||||||    
T  39379591 ttttcccgatctcaaaacacgggtacgggacgggtaatgaggataaaagtaccca-cccgaactcatactcaaactcgtcccgaatgtagtaaatcaatt 39379689  T
Q  200 tattactcattttatataaatagaaa 225  Q
    ||||| || || | ||||||||||||    
T  39379690 tatta-tccttctgtataaatagaaa 39379714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 93 - 226
Target Start/End: Original strand, 12468223 - 12468355
Alignment:
Q  93 tttgagtttttcccgatttcaaaacacgggtacgggacgggtaatagggagataggtacccaccccaaactcgtactcaaactcgtccggaatgtagaaa 192  Q
    |||| ||||| | ||||||| ||||||||||||| |||  ||||| ||||  |||||||| ||||| ||||| |||||||| |||| | |||||||||||    
T  12468223 tttgggttttcctcgatttcgaaacacgggtacgagacatgtaat-gggatgtaggtaccaaccccgaactcatactcaaattcgttccgaatgtagaaa 12468321  T
Q  193 atcaatttattactcattttatataaatagaaac 226  Q
    ||||| ||||||| | ||||||||||| ||||||    
T  12468322 atcaacttattaccctttttatataaagagaaac 12468355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 89 - 180
Target Start/End: Complemental strand, 17469343 - 17469252
Alignment:
Q  89 tgggtttgagtttttcccgatttcaaaacacgggtacgggacgggtaatagggagataggtacccaccccaaactcgtactcaaactcgtcc 180  Q
    |||||||| ||||| ||||||||||||||||||||| |||||||||||  || | ||||||||||||||||||| | ||| ||||| |||||    
T  17469343 tgggtttgggttttccccgatttcaaaacacgggtatgggacgggtaacgggtatataggtacccaccccaaacccatacccaaacccgtcc 17469252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 88 - 202
Target Start/End: Complemental strand, 14186409 - 14186295
Alignment:
Q  88 ttgggtttgagtttttcccgatttcaaaacacgggtacgggacgggtaatagggagataggtacccaccccaaactcgtactcaaactcgtccggaatgt 187  Q
    ||||||||||||||||| ||||||||||||||||||| |||| ||||||  |  | |||||||| |||||  ||| | ||| ||||| ||||| ||||||    
T  14186409 ttgggtttgagtttttctcgatttcaaaacacgggtatgggatgggtaacggatatataggtactcaccctgaacccatacccaaacccgtcctgaatgt 14186310  T
Q  188 agaaaatcaatttat 202  Q
    ||||||| |||||||    
T  14186309 agaaaattaatttat 14186295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 93 - 254
Target Start/End: Complemental strand, 17108460 - 17108299
Alignment:
Q  93 tttgagtttttcccgatttcaaaacacgggtacgggacgggtaatagggagataggtacccaccccaaactcgtactcaaactcgtccggaatgtagaaa 192  Q
    ||||||||||||  ||||| |||| ||| |||| | | ||||||| |||| ||| |||| |||| | ||||  ||| ||||||| ||| || |||| |||    
T  17108460 tttgagtttttcttgattttaaaatacgcgtacagaatgggtaatcgggatataagtacacacctcgaacttatacccaaactcatcccgattgtaaaaa 17108361  T
Q  193 atcaatttattactcattttatataaatagaaaccaaaactctgaatcatttcacccacaca 254  Q
    ||||||||||||  ||||||||||||||||||||  |||| || ||| ||||||| ||||||    
T  17108360 atcaatttattatccattttatataaatagaaacttaaaccctaaataatttcactcacaca 17108299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 92 - 194
Target Start/End: Original strand, 15173883 - 15173985
Alignment:
Q  92 gtttgagtttttcccgatttcaaaacacgggtacgggacgggtaatagggagataggtacccaccccaaactcgtactcaaactcgt-ccggaatgtaga 190  Q
    ||||||||||||||||||||||||| |||||||||||||||||||  | || ||| ||| ||||| | ||||| ||||||||| ||| || |||||||||    
T  15173883 gtttgagtttttcccgatttcaaaatacgggtacgggacgggtaaatgagatatatgtatccacctcgaactcatactcaaac-cgtacccgaatgtaga 15173981  T
Q  191 aaat 194  Q
    ||||    
T  15173982 aaat 15173985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 39 - 158
Target Start/End: Complemental strand, 34777204 - 34777085
Alignment:
Q  39 ccgtccgaatcaatctcactttgacgtgttttttccgttttgactgaatttgggtttgagtttttcccgatttcaaaacacgggtacgggacgggtaata 138  Q
    ||||||||| ||| | || ||| ||| |||||| ||||||||||||  ||||||| || |||||||||||| |||||||||||||| || ||| |||| |    
T  34777204 ccgtccgaaccaaacccaatttaacgggtttttcccgttttgactgggtttgggtatgggtttttcccgatctcaaaacacgggtatggaacgagtaaca 34777105  T
Q  139 gggagataggtacccacccc 158  Q
    || |  ||||||||||||||    
T  34777104 ggtatttaggtacccacccc 34777085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 98 - 173
Target Start/End: Original strand, 43113635 - 43113710
Alignment:
Q  98 gtttttcccgatttcaaaacacgggtacgggacgggtaatagggagataggtacccaccccaaactcgtactcaaa 173  Q
    ||||||||||||||||||||||||| | ||||||||||| ||| | ||||||||||||||| ||||| ||| ||||    
T  43113635 gtttttcccgatttcaaaacacgggcatgggacgggtaacaggtatataggtacccaccccgaactcatacccaaa 43113710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 104 - 262
Target Start/End: Original strand, 9476028 - 9476186
Alignment:
Q  104 cccgatttcaaaacacgggtacgggacgggtaatagggagataggtacccaccccaaactcgtactcaaactcgtccggaatgtagaaaatcaatttatt 203  Q
    ||||||||||||| |||| ||||||||  ||||  |||| |||  |||||||| | ||| | ||| ||||| | ||| ||||||||||||| || |||||    
T  9476028 cccgatttcaaaaaacggatacgggacaagtaacggggatataaatacccacctcgaacccatacccaaacccatcccgaatgtagaaaattaaattatt 9476127  T
Q  204 actcattttatataaatagaaaccaaaactctgaatcatttcacccacacagttagagt 262  Q
    || | || ||||||||||||||   ||||||| ||| ||||||| |||||||| |||||    
T  9476128 accccttatatataaatagaaattgaaactctaaattatttcactcacacagtcagagt 9476186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 92 - 218
Target Start/End: Complemental strand, 14155617 - 14155491
Alignment:
Q  92 gtttgagtttttcccgatttcaaaacacgggtacgggacgggtaatagggagataggtacccaccccaaactcgtactcaaactcgtccggaatgtagaa 191  Q
    ||||| |||||||||||||||||||||||||||   || ||||||   ||| |||  || |||||||||| || ||| ||||| | |||  |||||||||    
T  14155617 gtttgggtttttcccgatttcaaaacacgggtataagatgggtaacgaggatatatttatccaccccaaattcatacccaaacccatcctaaatgtagaa 14155518  T
Q  192 aatcaatttattactcattttatataa 218  Q
    |||||||||||||| | ||||||||||    
T  14155517 aatcaatttattaccccttttatataa 14155491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 93 - 198
Target Start/End: Complemental strand, 14687483 - 14687378
Alignment:
Q  93 tttgagtttttcccgatttcaaaacacgggtacgggacgggtaatagggagataggtacccaccccaaactcgtactcaaactcgtccggaatgtagaaa 192  Q
    |||| ||||| |||||||||||||||| |||| |||||| | || ||||| ||| ||| ||||||| ||| | ||| ||||||||||| |||||| ||||    
T  14687483 tttgggttttccccgatttcaaaacacaggtatgggacgagaaacagggatatatgtatccaccccgaacccatacccaaactcgtcctgaatgtggaaa 14687384  T
Q  193 atcaat 198  Q
    ||||||    
T  14687383 atcaat 14687378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 92 - 201
Target Start/End: Original strand, 30481424 - 30481533
Alignment:
Q  92 gtttgagtttttcccgatttcaaaacacgggtacgggacgggtaatagggagataggtacccaccccaaactcgtactcaaactcgtccggaatgtagaa 191  Q
    ||||| |||||||| |||||||||| ||| ||| | |||| |||||  ||| ||||||||||||||| ||| | ||| ||||||||||| ||||||| ||    
T  30481424 gtttgggtttttcctgatttcaaaatacgagtatgagacgagtaatgaggatataggtacccaccccgaacccatacccaaactcgtcccgaatgtaaaa 30481523  T
Q  192 aatcaattta 201  Q
    ||| ||||||    
T  30481524 aattaattta 30481533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 89 - 158
Target Start/End: Complemental strand, 45236153 - 45236084
Alignment:
Q  89 tgggtttgagtttttcccgatttcaaaacacgggtacgggacgggtaatagggagataggtacccacccc 158  Q
    ||||| |||||||| || |||||||||||||||||| |||||||||||| || | |||||||||||||||    
T  45236153 tgggtatgagttttccctgatttcaaaacacgggtatgggacgggtaatgggtatataggtacccacccc 45236084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 166 - 325
Target Start/End: Complemental strand, 5793596 - 5793437
Alignment:
Q  166 tactcaaactcgtccggaatgtagaaaatcaatttattactcatttt-atataaatagaaaccaaaactctgaatcatttcacccacacagttagagttt 264  Q
    |||||||||||||||  |||||| |||||||||| |||| ||||||| ||||||||||||||  |||| || ||||||||||| ||||||   | ||| |    
T  5793596 tactcaaactcgtcctaaatgtaaaaaatcaattaatta-tcatttttatataaatagaaactcaaaccctaaatcatttcactcacacaaccaaagtct 5793498  T
Q  265 cagttttttagatgacatccacttattatagttctctcttttctccttctatatctcacac 325  Q
     ||| |||  || ||||  ||||| ||  |||||||||||||||||||| | |||||||||    
T  5793497 aagtctttctgacgacactcacttctttaagttctctcttttctccttccacatctcacac 5793437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 58 - 158
Target Start/End: Original strand, 24869987 - 24870093
Alignment:
Q  58 tttgacgtgttttttccgttttgactgaatttgggtttg------agtttttcccgatttcaaaacacgggtacgggacgggtaatagggagataggtac 151  Q
    ||||||| |||||| ||||||||||||||||||||| ||      |||||| |||||||| |||||||||||| | |||||||||  || | ||||||||    
T  24869987 tttgacgggtttttcccgttttgactgaatttgggtatggctatgagttttccccgattttaaaacacgggtatgtgacgggtaacgggtatataggtac 24870086  T
Q  152 ccacccc 158  Q
    |||||||    
T  24870087 ccacccc 24870093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 100 - 166
Target Start/End: Complemental strand, 35215613 - 35215547
Alignment:
Q  100 ttttcccgatttcaaaacacgggtacgggacgggtaatagggagataggtacccaccccaaactcgt 166  Q
    ||||||||||||||||||||||||| | |||||||||   | | |||||||||||||||||||||||    
T  35215613 ttttcccgatttcaaaacacgggtatgagacgggtaacgagtatataggtacccaccccaaactcgt 35215547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 58 - 155
Target Start/End: Original strand, 11254978 - 11255074
Alignment:
Q  58 tttgacgtgttttttccgttttgactgaatttgggtttgagtttttcccgatttcaaaacacgggtacgggacgggtaatagggagataggtacccac 155  Q
    ||||||| ||||||||||||||||||   ||||||| || ||||| |||| |||| ||||||||||| ||||||| ||| ||| | ||||||||||||    
T  11254978 tttgacgggttttttccgttttgactaggtttgggtatgggtttt-cccgctttccaaacacgggtatgggacggataacaggtatataggtacccac 11255074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 89 - 194
Target Start/End: Original strand, 39445576 - 39445681
Alignment:
Q  89 tgggtttgagtttttcccgatttcaaaacacgggtacgggacgggtaatagggagataggtacccaccccaaactcgtactcaaactcgtccggaatgta 188  Q
    ||||| || ||||||||||||||||||||||||||| ||||| |||||  ||   ||||||||||||||| ||||| ||| || || |||||  ||||||    
T  39445576 tgggtatgggtttttcccgatttcaaaacacgggtatgggacaggtaacgggtttataggtacccaccccgaactcatacccatacccgtcccaaatgta 39445675  T
Q  189 gaaaat 194  Q
     |||||    
T  39445676 aaaaat 39445681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 89 - 173
Target Start/End: Complemental strand, 1063595 - 1063511
Alignment:
Q  89 tgggtttgagtttttcccgatttcaaaacacgggtacgggacgggtaatagggagataggtacccaccccaaactcgtactcaaa 173  Q
    ||||| || ||||||||||||||||||||||||||| ||||||| |||  || | ||| ||||||||||| ||||| ||| ||||    
T  1063595 tgggtatgggtttttcccgatttcaaaacacgggtatgggacggttaacgggtatataagtacccaccccgaactcatacccaaa 1063511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 92 - 180
Target Start/End: Original strand, 37960965 - 37961053
Alignment:
Q  92 gtttgagtttttcccgatttcaaaacacgggtacgggacgggtaatagggagataggtacccaccccaaactcgtactcaaactcgtcc 180  Q
    ||||| ||||| |||||||| |||||||||||| ||||| ||||| ||| | |||||||| |||||| ||||| ||| ||||| |||||    
T  37960965 gtttgggttttccccgatttaaaaacacgggtatgggacaggtaacaggtatataggtacacaccccgaactcatacccaaacccgtcc 37961053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 89 - 136
Target Start/End: Original strand, 5858652 - 5858699
Alignment:
Q  89 tgggtttgagtttttcccgatttcaaaacacgggtacgggacgggtaa 136  Q
    |||||||| |||||||||||||| |||||||||||| |||||||||||    
T  5858652 tgggtttgggtttttcccgatttaaaaacacgggtatgggacgggtaa 5858699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 89 - 136
Target Start/End: Original strand, 9642351 - 9642398
Alignment:
Q  89 tgggtttgagtttttcccgatttcaaaacacgggtacgggacgggtaa 136  Q
    |||||||| ||||| ||||||||||||||||||||| |||||||||||    
T  9642351 tgggtttgggttttccccgatttcaaaacacgggtatgggacgggtaa 9642398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 92 - 186
Target Start/End: Complemental strand, 1012703 - 1012610
Alignment:
Q  92 gtttgagtttttcccgatttcaaaacacgggtacgggacgggtaatagggagataggtacccaccccaaactcgtactcaaactcgtccggaatg 186  Q
    ||||| ||||| |||||||| |||||| | ||| |||||||||||| || | ||||||||||||||| ||| | ||| ||||||||||| |||||    
T  1012703 gtttgggttttccccgattt-aaaacatgagtatgggacgggtaatgggtatataggtacccaccccgaacccatacccaaactcgtcccgaatg 1012610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 89 - 226
Target Start/End: Original strand, 27056555 - 27056693
Alignment:
Q  89 tgggtttgagtttttcccgatttcaaaacacgggtacgggacgggtaatagggagataggtacccaccccaaactcgtactcaaactcgtccggaatgta 188  Q
    |||||||| ||||||||||||||||||  || |||| |||||||||||  |||  |||  |||||||||| ||| | ||| || ||||||||  ||||||    
T  27056555 tgggtttgggtttttcccgatttcaaagtacaggtatgggacgggtaacggggttatatctacccaccccgaacccatacacatactcgtcccaaatgta 27056654  T
Q  189 gaaaatcaatttatta-ctcattttatataaatagaaac 226  Q
     ||||| | ||| ||| | | ||||||||||||||||||    
T  27056655 aaaaattacttttttacccccttttatataaatagaaac 27056693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 89 - 171
Target Start/End: Complemental strand, 27932501 - 27932419
Alignment:
Q  89 tgggtttgagtttttcccgatttcaaaacacgggtacgggacgggtaatagggagataggtacccaccccaaactcgtactca 171  Q
    ||||| || ||||| ||||||||||||||||||||| |||||| ||||  || | ||||||||||||||| ||| | ||||||    
T  27932501 tgggtatgggttttccccgatttcaaaacacgggtatgggacgagtaacgggtatataggtacccaccccgaacccatactca 27932419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 89 - 158
Target Start/End: Complemental strand, 20399680 - 20399611
Alignment:
Q  89 tgggtttgagtttttcccgatttcaaaacacgggtacgggacgggtaatagggagataggtacccacccc 158  Q
    |||||||| |||||  |||||||||||||||||||| |||||||||||  || | |||| ||||||||||    
T  20399680 tgggtttgggttttctccgatttcaaaacacgggtatgggacgggtaacgggtatatagatacccacccc 20399611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 89 - 193
Target Start/End: Complemental strand, 32303149 - 32303045
Alignment:
Q  89 tgggtttgagtttttcccgatttcaaaacacgggtacgggacgggtaatagggagataggtacccaccccaaactcgtactcaaactcgtccggaatgta 188  Q
    ||||| || ||||| |||||| || ||||||||||| |||||||||||  || | ||||||||||||||| ||| | ||| ||||| |||||  ||||||    
T  32303149 tgggtatgggttttccccgatctcgaaacacgggtatgggacgggtaacgggtatataggtacccaccccgaacccatacccaaacccgtcccaaatgta 32303050  T
Q  189 gaaaa 193  Q
     ||||    
T  32303049 aaaaa 32303045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 88 - 192
Target Start/End: Original strand, 36131916 - 36132020
Alignment:
Q  88 ttgggtttgagtttttcccgatttcaaaacacgggtacgggacgggtaatagggagataggtacccaccccaaactcgtactcaaactcgtccggaatgt 187  Q
    ||||||||||||||| ||| ||||||||||||| ||| |||| ||||||  || | | ||||| ||||||| ||||| ||| ||||  ||||| |||||     
T  36131916 ttgggtttgagttttcccctatttcaaaacacgagtatgggatgggtaaagggcatacaggtatccaccccgaactcatacacaaatccgtcccgaatgc 36132015  T
Q  188 agaaa 192  Q
    |||||    
T  36132016 agaaa 36132020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 105 - 192
Target Start/End: Original strand, 2183622 - 2183709
Alignment:
Q  105 ccgatttcaaaacacgggtacgggacgggtaatagggagataggtacccaccccaaactcgtactcaaactcgtccggaatgtagaaa 192  Q
    |||||||||||| ||||||||| ||  |||||| | || ||| ||||||||||| ||||| ||||||||| |  || |||||||||||    
T  2183622 ccgatttcaaaatacgggtacgagagaggtaatggagatatatgtacccaccccgaactcatactcaaaccctacccgaatgtagaaa 2183709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 292 - 329
Target Start/End: Complemental strand, 14687379 - 14687342
Alignment:
Q  292 atagttctctcttttctccttctatatctcacactctc 329  Q
    ||||||||||||||||| |||| |||||||||||||||    
T  14687379 atagttctctcttttcttcttccatatctcacactctc 14687342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 89 - 158
Target Start/End: Original strand, 29108822 - 29108891
Alignment:
Q  89 tgggtttgagtttttcccgatttcaaaacacgggtacgggacgggtaatagggagataggtacccacccc 158  Q
    ||||| || |||||||||||||| |||||| ||||| |||||||||||  || | ||| |||||||||||    
T  29108822 tgggtatgggtttttcccgattttaaaacatgggtatgggacgggtaacgggtatatatgtacccacccc 29108891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 91; Significance: 5e-44; HSPs: 52)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 98 - 336
Target Start/End: Original strand, 42728953 - 42729191
Alignment:
Q  98 gtttttcccgatttcaaaacacgggtacgggacgggtaatagggagataggtacccaccccaaactcgtactcaaactcgtccggaatgtagaaaatcaa 197  Q
    ||||||||||||||||||||| ||||||  |||| || || |||| || |||| | ||||| ||||| ||| ||||| ||| | ||||||||||||| ||    
T  42728953 gtttttcccgatttcaaaacatgggtacaagacgagtgatggggatatgggtaactaccccgaactcatacccaaacacgttctgaatgtagaaaataaa 42729052  T
Q  198 tttattactcattttatataaatagaaaccaaaactctgaatcatttcacccacacagttagagtttcagttttttagatgacatccacttattatagtt 297  Q
    ||||| |  | ||||||||||||||||||  | || || ||||||||||| |||||||| ||||| ||||| ||| |||| ||| |||||||| ||||||    
T  42729053 tttatcatcccttttatataaatagaaacttatacactaaatcatttcactcacacagtcagagtctcagtctttcagataacacccacttatcatagtt 42729152  T
Q  298 ctctcttttctccttctatatctcacactctcggtctct 336  Q
    ||||||| |||||||| |||| |||||||||||||||||    
T  42729153 ctctcttgtctccttccatatatcacactctcggtctct 42729191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 92 - 336
Target Start/End: Complemental strand, 13692715 - 13692486
Alignment:
Q  92 gtttgagtttttcccgatttcaaaacacgggtacgggacgggtaatagggagataggtacccaccccaaactcgtactcaaactcgtccggaatgtagaa 191  Q
    |||||||||||||||||||||| |||| |||||||||||||  || |  |||||||||||||||||||||| |   | ||           |||||||||    
T  13692715 gtttgagtttttcccgatttcataacatgggtacgggacgg--aaaacagagataggtacccaccccaaaccc---caca-----------aatgtagaa 13692632  T
Q  192 aatcaa-tttattactcattttatataaatagaaaccaaaactctgaatcatttcacccacacagttagagtttcagttttttagatgacatccacttat 290  Q
    |||||| |||||||  | |||||||||||||||||||||||| || |||||||||||||||||| ||||||| | | | ||| ||| ||||  |||||||    
T  13692631 aatcaattttattatcccttttatataaatagaaaccaaaaccctaaatcatttcacccacacaattagagtcttactctttcagacgacactcacttat 13692532  T
Q  291 tatagttctctcttttctccttctatatctcacactctcggtctct 336  Q
    ||||||||||||||||||||||| ||||||||||||||||| ||||    
T  13692531 tatagttctctcttttctccttccatatctcacactctcggcctct 13692486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 90 - 329
Target Start/End: Complemental strand, 39219346 - 39219107
Alignment:
Q  90 gggtttgagtttttcccgatttcaaaacacgggtacgggacgggtaatagggagataggtacccaccccaaactcgtactcaaactcgtccggaatgtag 189  Q
    ||||||| ||||| |||||||| ||||||||||||||| ||  ||||  |||| | | ||||||||||| ||| | ||| ||||||||| |  |||||||    
T  39219346 gggtttgggttttccccgattttaaaacacgggtacggaacaagtaacggggatacatgtacccaccccgaacccatacccaaactcgttctaaatgtag 39219247  T
Q  190 aaaatcaatttattactcattttatataaatagaaaccaaaactctgaatcatttcacccacacagttagagtttcagttttttagatgacatccactta 289  Q
    ||||| ||||||||||   ||||||||||||||||||  |||| || ||||||||| | |||||||| | ||| ||| ||||| | ||||||  ||||||    
T  39219246 aaaattaatttattacctcttttatataaatagaaactcaaaccctaaatcatttcgctcacacagtcacagtctcattttttcatatgacactcactta 39219147  T
Q  290 ttatagttctctcttttctccttctatatctcacactctc 329  Q
    | |||||| |||| |||||||||  ||||| |||||||||    
T  39219146 tcatagttatctcctttctcctttcatatcgcacactctc 39219107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 113 - 321
Target Start/End: Complemental strand, 36421831 - 36421623
Alignment:
Q  113 aaaacacgggtacgggacgggtaatagggagataggtacccaccccaaactcgtactcaaactcgtccggaatgtagaaaatcaatttattactcatttt 212  Q
    |||| ||||||||||||   |||||||||| |||||||| |||||| ||||  ||| ||||||||||  |||| ||||||||||||||||||  | | ||    
T  36421831 aaaatacgggtacgggataagtaatagggatataggtactcaccccgaacttatacccaaactcgtctcgaatatagaaaatcaatttattatccctctt 36421732  T
Q  213 atataaatagaaaccaaaactctgaatcatttcacccacacagttagagtttcagttttttagatgacatccacttattatagttctctcttttctcctt 312  Q
    ||||||||| ||||   |||||| ||||||||||  |||||||| ||||| ||| | ||| ||||| ||  ||||||| |||||||||||||||||||||    
T  36421731 atataaataaaaactcgaactctaaatcatttcattcacacagtcagagtctcaatctttcagatggcaatcacttatcatagttctctcttttctcctt 36421632  T
Q  313 ctatatctc 321  Q
      |||||||    
T  36421631 tcatatctc 36421623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 99 - 247
Target Start/End: Original strand, 48125693 - 48125841
Alignment:
Q  99 tttttcccgatttcaaaacacgggtacgggacgggtaatagggagataggtacccaccccaaactcgtactcaaactcgtccggaatgtagaaaatcaat 198  Q
    ||||||| ||||| ||||||||||||||||||||||||   ||| ||||||| ||||||| ||| | ||| ||||||||||  |||||||||||||||||    
T  48125693 tttttcctgattttaaaacacgggtacgggacgggtaacgaggatataggtatccaccccgaacccatacccaaactcgtcgcgaatgtagaaaatcaat 48125792  T
Q  199 ttattactcattttatataaatagaaaccaaaactctgaatcatttcac 247  Q
    ||| |||   ||||||||||||||||||  ||||||| ||| |||||||    
T  48125793 ttactaccgcttttatataaatagaaactcaaactctaaattatttcac 48125841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 99 - 330
Target Start/End: Complemental strand, 16903602 - 16903369
Alignment:
Q  99 tttttcccgatttcaaaacacgggtacgggacgggtaatagggagataggtacccaccccaaactcgtactcaaactcgtccggaatgt--------aga 190  Q
    |||||||| |||| |||||||| ||||||||  |||||| |||| ||||||||||||||| ||||| ||| ||||| ||||| ||||||        | |    
T  16903602 tttttcccaattttaaaacacgagtacgggataggtaatggggatataggtacccaccccgaactcatacccaaacccgtcccgaatgtaaaaaaaaaaa 16903503  T
Q  191 aaatcaatttattactcattttatataaatagaaaccaaaactctgaatcatttcacccacacagttagagtttcagttttttagatgacatccacttat 290  Q
    ||||||||||||| | | ||||||||||||| ||||  |||| || ||| ||||||| |||||| | ||||||||||| |      |||||  |||||||    
T  16903502 aaatcaatttattgccctttttatataaatataaactcaaaccctaaattatttcactcacacaatcagagtttcagtct------tgacaatcacttat 16903409  T
Q  291 tatagttctctcttttctccttctatatctcacactctcg 330  Q
     |||||||||||||||||||||| |||| |||||||||||    
T  16903408 catagttctctcttttctccttccatatttcacactctcg 16903369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 99 - 336
Target Start/End: Original strand, 25154837 - 25155074
Alignment:
Q  99 tttttcccgatttcaaaacacgggtacgggacgggtaatagggagataggtacccaccccaaactcgtactcaaactcgtccggaatgtagaaaatcaat 198  Q
    |||||||||||||||||||||| |||||||||| ||||| |||| ||| ||||||||  | ||||| | | ||||| ||||| |||| ||||||||||||    
T  25154837 tttttcccgatttcaaaacacgagtacgggacgagtaatggggatataagtacccacttcgaactcatgcccaaacccgtcctgaatttagaaaatcaat 25154936  T
Q  199 ttattactcattttatataaatagaaaccaaaactctgaatcatttcacccacacagttagagtttcagttttttagatgacatccacttattatagttc 298  Q
    | | ||| | ||||||  |||  |||| | ||||  | ||| |||||||   ||| || ||||| || ||  |||||||||||  ||||||| |||||||    
T  25154937 tcactaccccttttattcaaagggaaatccaaaccttaaattatttcactatcactgtgagagtctcggtcatttagatgacactcacttatcatagttc 25155036  T
Q  299 tctcttttctccttctatatctcacactctcggtctct 336  Q
    ||| ||||||||||  | ||||||||||||||||||||    
T  25155037 tcttttttctcctttcaaatctcacactctcggtctct 25155074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 92 - 244
Target Start/End: Original strand, 33293534 - 33293675
Alignment:
Q  92 gtttgagtttttcccgatttcaaaacacgggtacgggacgggtaatagggagataggtacccaccccaaactcgtactcaaactcgtccggaatgtagaa 191  Q
    ||||| ||||||||||||||||||||||||||| |||||||||||| |||| ||||| |||||           ||| ||||||||| | ||||||||||    
T  33293534 gtttgggtttttcccgatttcaaaacacgggtatgggacgggtaatggggatataggaaccca-----------tacccaaactcgttccgaatgtagaa 33293622  T
Q  192 aatcaatttattactcattttatataaatagaaaccaaaactctgaatcattt 244  Q
    |||||||||| ||| |||||||||| |||||||||  |||| || ||||||||    
T  33293623 aatcaatttagtacccattttatatcaatagaaactcaaaccctaaatcattt 33293675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 106 - 330
Target Start/End: Complemental strand, 8880520 - 8880296
Alignment:
Q  106 cgatttcaaaacacgggtacgggacgggtaatagggagataggtacccaccccaaactcgtactcaaactcgtccggaatgtagaaaatcaatttattac 205  Q
    |||||| |||||||| |||| |||| |||||| |||| | ||||| ||||||   || | ||| ||||| |||||  ||||   ||||| ||||||||||    
T  8880520 cgatttaaaaacacgagtacaggacaggtaatggggataaaggtatccaccctggacccatacccaaacccgtcccaaatgctaaaaataaatttattac 8880421  T
Q  206 tcattttatataaatagaaaccaaaactctgaatcatttcacccacacagttagagtttcagttttttagatgacatccacttattatagttctctcttt 305  Q
     | |||| |||||||||||||  ||||| | ||||||||||| |||| |||||||||  |||| ||| || |||||   | |||| ||| ||||||||||    
T  8880420 cccttttttataaatagaaactcaaactttaaatcatttcactcacaaagttagagtcgcagtctttcagttgacacttatttatcataattctctcttt 8880321  T
Q  306 tctccttctatatctcacactctcg 330  Q
    |||||||| |||||||||| |||||    
T  8880320 tctccttccatatctcacaatctcg 8880296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 160 - 336
Target Start/End: Complemental strand, 25181222 - 25181045
Alignment:
Q  160 aactcgtactcaaactcgtccggaatgtagaaaatcaatttattactcattttatataaatagaaaccaaaactctgaa-tcatttcacccacacagtta 258  Q
    ||||| |||||||||||||||  | |||| ||| |||||||| ||  | || |||||||||||||||| ||||||| || | ||||||| |||| |||||    
T  25181222 aactcatactcaaactcgtcccaattgtaaaaagtcaatttactatcccttctatataaatagaaacctaaactcttaaataatttcactcacatagtta 25181123  T
Q  259 gagtttcagttttttagatgacatccacttattatagttctctcttttctccttctatatctcacactctcggtctct 336  Q
    |||| |  || ||| |||||| |  ||||||||| | |||| ||||||||||||| ||||||||||||| ||| ||||    
T  25181122 gagtctttgtctttcagatgatactcacttattacaattctttcttttctccttccatatctcacactcccggcctct 25181045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 53 - 180
Target Start/End: Original strand, 44615433 - 44615566
Alignment:
Q  53 ctcactttgacgtgttttttccgttttgactgaatttgggtttgagttt-----ttccc-gatttcaaaacacgggtacgggacgggtaatagggagata 146  Q
    |||| ||||||| |||||| ||||||||||||  ||||||| |||||||     ||||| ||||| |||||||||||| ||||||||||| ||| | |||    
T  44615433 ctcaatttgacgggtttttcccgttttgactgggtttgggtatgagtttgggttttccctgatttaaaaacacgggtatgggacgggtaacaggtatata 44615532  T
Q  147 ggtacccaccccaaactcgtactcaaactcgtcc 180  Q
    |||||||||||||||||| ||| ||||| |||||    
T  44615533 ggtacccaccccaaactcatacccaaacccgtcc 44615566  T

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Target: chr1; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 53 - 180
Target Start/End: Complemental strand, 44793136 - 44793003
Alignment:
Q  53 ctcactttgacgtgttttttccgttttgactgaatttgggtttgagttt-----ttccc-gatttcaaaacacgggtacgggacgggtaatagggagata 146  Q
    |||| ||||||| |||||| ||||||||||||  ||||||| |||||||     ||||| ||||| |||||||||||| ||||||||||| ||| | |||    
T  44793136 ctcaatttgacgggtttttcccgttttgactgggtttgggtatgagtttgggttttccctgatttaaaaacacgggtatgggacgggtaacaggtatata 44793037  T
Q  147 ggtacccaccccaaactcgtactcaaactcgtcc 180  Q
    |||||||||||||||||| ||| ||||| |||||    
T  44793036 ggtacccaccccaaactcatacccaaacccgtcc 44793003  T

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Target: chr1; HSP #13
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 83 - 336
Target Start/End: Original strand, 41476946 - 41477199
Alignment:
Q  83 tgaatttgggtttgagtttttcccgatttcaaaacacgggtacgggacgggtaatagggagataggtacccaccccaaactcgtactcaaactcgtccgg 182  Q
    ||||| || ||||| ||||||  |||||  |||| ||| ||||||||||| |||   ||| ||| ||||||||||| ||  | ||| ||||| ||||| |    
T  41476946 tgaatatgagtttgggtttttttcgattggaaaatacgagtacgggacggataacgtggatatatgtacccaccccgaatccatacccaaacccgtcccg 41477045  T
Q  183 aatgtagaaaatcaatttattactcattttatataaatagaaaccaaaactctgaatcatttcacccacacagttagagtttcagttttttagatgacat 282  Q
    || | ||||||||||||| |||| | ||||||||||| |||||   |||| || ||| ||||||  |||||||| | ||| || || ||| ||||||||     
T  41477046 aaagcagaaaatcaatttgttaccctttttatataaagagaaatggaaaccctaaattatttcattcacacagtcaaagtctccgtctttcagatgacac 41477145  T
Q  283 ccacttattatagttctctcttttctccttctatatctcacactctcggtctct 336  Q
    |||||||| ||| |||||| || || ||||  |||| |||||||||||| ||||    
T  41477146 ccacttatcataattctcttttatcccctttcatatttcacactctcggcctct 41477199  T

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Target: chr1; HSP #14
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 144 - 256
Target Start/End: Complemental strand, 23719636 - 23719525
Alignment:
Q  144 ataggtacccaccccaaactcgtactcaaactcgtccggaatgtagaaaatcaatttattactcattttatataaatagaaaccaaaactctgaatcatt 243  Q
    ||||||| ||| ||| ||||| ||||||||||||||| ||||||| ||| |||||||| ||| | ||||||||||||||||||  ||||| | |||||||    
T  23719636 ataggtatccatcccgaactcatactcaaactcgtcccgaatgtacaaa-tcaatttactaccctttttatataaatagaaactcaaactataaatcatt 23719538  T
Q  244 tcacccacacagt 256  Q
    ||||  |||||||    
T  23719537 tcactaacacagt 23719525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 92 - 218
Target Start/End: Complemental strand, 13798324 - 13798198
Alignment:
Q  92 gtttgagtttttcccgatttcaaaacacgggtacgggacgggtaatagggagataggtacccaccccaaactcgtactcaaactcgtccggaatgtagaa 191  Q
    ||||| ||||||||||||||||||||||||||| | || ||||||   ||| |||  || |||||||||| || |||  |||| | |||  |||||||||    
T  13798324 gtttgggtttttcccgatttcaaaacacgggtatgagatgggtaacgaggatatatttatccaccccaaattcatacctaaacccatcctaaatgtagaa 13798225  T
Q  192 aatcaatttattactcattttatataa 218  Q
    |||||||||||||| | ||||||||||    
T  13798224 aatcaatttattaccccttttatataa 13798198  T

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Target: chr1; HSP #16
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 105 - 330
Target Start/End: Original strand, 5293421 - 5293651
Alignment:
Q  105 ccgatttcaaaacacgggtacgggacgggtaatagggagataggtacccaccccaaac------tcgtactcaaactcgtccggaatgtagaaaatcaat 198  Q
    |||||||||||| || ||||| |||||| ||| ||||| ||| |||||||| ||||||      || ||| ||||||||||| |||||| |||| |||||    
T  5293421 ccgatttcaaaatactggtacaggacggataacagggatatatgtacccactccaaacccaaattcatac-caaactcgtcccgaatgttgaaagtcaat 5293519  T
Q  199 ttattactca-ttttatataaatagaaaccaaaactctgaatcatttcacccacacagttagagtttcagttttttagatgacatccacttattatagtt 297  Q
    |||||| ||| ||||||||||||||||||  ||||||  ||  ||||||  |||||||  ||||| ||||  |||    |||||  ||||||| ||||||    
T  5293520 ttatta-tcacttttatataaatagaaactcaaactcaaaactatttcaatcacacagccagagtctcagactttcgattgacagacacttatgatagtt 5293618  T
Q  298 ctctcttttctccttctatatctcacactctcg 330  Q
    ||||||||| || ||| |||||||||| |||||    
T  5293619 ctctcttttttcattccatatctcacaatctcg 5293651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 89 - 194
Target Start/End: Original strand, 19572512 - 19572617
Alignment:
Q  89 tgggtttgagtttttcccgatttcaaaacacgggtacgggacgggtaatagggagataggtacccaccccaaactcgtactcaaactcgtccggaatgta 188  Q
    ||||| || ||||||||||||||||||||||||||| ||||| |||||  || | ||||||||||||||| ||| | |||||| || |||||  ||||||    
T  19572512 tgggtatgggtttttcccgatttcaaaacacgggtatgggacaggtaacgggtatataggtacccaccccgaacccatactcatacccgtcccaaatgta 19572611  T
Q  189 gaaaat 194  Q
     |||||    
T  19572612 aaaaat 19572617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 92 - 192
Target Start/End: Original strand, 35069892 - 35069992
Alignment:
Q  92 gtttgagtttttcccgatttcaaaacacgggtacgggacgggtaatagggagataggtacccaccccaaactcgtactcaaactcgtccggaatgtagaa 191  Q
    ||||||||||| |||||||||| || ||||||||  ||||||||| ||||| ||| ||||||||||| ||| | ||||||||| |  || ||||||||||    
T  35069892 gtttgagttttccccgatttcataatacgggtacaagacgggtaacagggatatatgtacccaccccgaacccatactcaaaccctacccgaatgtagaa 35069991  T
Q  192 a 192  Q
    |    
T  35069992 a 35069992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 111 - 254
Target Start/End: Original strand, 5283615 - 5283758
Alignment:
Q  111 tcaaaacacgggtacgggacgggtaatagggagataggtacccaccccaaactcgtactcaaactcgtccggaatgtagaaaatcaatttattactcatt 210  Q
    |||||||| | |||||||||||||||| |||| | | ||||||||| | ||||| |||  |||| |||| ||| |||||||||||||||||| |  | ||    
T  5283615 tcaaaacatgagtacgggacgggtaatggggatagaagtacccacctcgaactcatacctaaacccgtctggattgtagaaaatcaatttatcatccctt 5283714  T
Q  211 ttatataaatagaaaccaaaactctgaatcatttcacccacaca 254  Q
    || ||||||||| |||  ||||| | ||||||||| | ||||||    
T  5283715 ttgtataaataggaactcaaactttaaatcatttctctcacaca 5283758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 91 - 226
Target Start/End: Original strand, 47644862 - 47644996
Alignment:
Q  91 ggtttgagtttttcccgatttcaaaacacgggtacgggacgggtaatagggagataggtacccaccccaaactcgtactcaaactcgtccggaatgtaga 190  Q
    |||||| ||||| |||||| ||||||||| |||||||||||| |||| |||| | | ||||| ||||| ||||| ||  || |||||||| ||||||| |    
T  47644862 ggtttgggttttccccgatctcaaaacacaggtacgggacggataat-gggatagaagtacctaccccgaactcatatccatactcgtcccgaatgtaaa 47644960  T
Q  191 aaatcaatttattactcattttatataaatagaaac 226  Q
    | |  |||||||||  | ||||||||||||||||||    
T  47644961 ataataatttattatcccttttatataaatagaaac 47644996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 92 - 194
Target Start/End: Original strand, 29871288 - 29871390
Alignment:
Q  92 gtttgagtttttcccgatttcaaaacacgggtacgggacgggtaatagggagataggtacccaccccaaactcgtactcaaactcgtccggaatgtagaa 191  Q
    ||||| |||||  |||||||||||||| ||||| ||||| |||||  || | ||||||||||||||  ||||| ||| ||||| ||||| ||||||||||    
T  29871288 gtttgggttttctccgatttcaaaacatgggtatgggacaggtaactggtatataggtacccaccctgaactcatacccaaacccgtcccgaatgtagaa 29871387  T
Q  192 aat 194  Q
    |||    
T  29871388 aat 29871390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 58 - 136
Target Start/End: Original strand, 10778530 - 10778614
Alignment:
Q  58 tttgacgtgttttttccgttttgactgaatttgggtttgagtt------tttcccgatttcaaaacacgggtacgggacgggtaa 136  Q
    ||||||| |||||||||| ||||||||  ||||||| ||||||      |||||||||||||||||||||||| |||||||||||    
T  10778530 tttgacgggttttttccgctttgactgggtttgggtatgagtttaagtttttcccgatttcaaaacacgggtatgggacgggtaa 10778614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 158 - 247
Target Start/End: Original strand, 43513098 - 43513187
Alignment:
Q  158 caaactcgtactcaaactcgtccggaatgtagaaaatcaatttattactcattttatataaatagaaaccaaaactctgaatcatttcac 247  Q
    ||||||| ||||||||| |||   ||||||| ||||||||||||| |||| ||||||||||||||||||  |||| || ||| |||||||    
T  43513098 caaactcatactcaaacccgtttcgaatgtaaaaaatcaatttataactctttttatataaatagaaactcaaaccctaaataatttcac 43513187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 89 - 194
Target Start/End: Complemental strand, 51421947 - 51421842
Alignment:
Q  89 tgggtttgagtttttcccgatttcaaaacacgggtacgggacgggtaatagggagataggtacccaccccaaactcgtactcaaactcgtccggaatgta 188  Q
    ||||| || |||||||||||| |||||||||||||| ||||||||||| | | | ||| ||||||||||| ||| | ||| ||||| |||||  ||||||    
T  51421947 tgggtatgggtttttcccgatctcaaaacacgggtatgggacgggtaacatgtatatatgtacccaccccgaacccatacccaaacccgtcccaaatgta 51421848  T
Q  189 gaaaat 194  Q
     |||||    
T  51421847 aaaaat 51421842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 89 - 193
Target Start/End: Complemental strand, 12495099 - 12494995
Alignment:
Q  89 tgggtttgagtttttcccgatttcaaaacacgggtacgggacgggtaatagggagataggtacccaccccaaactcgtactcaaactcgtccggaatgta 188  Q
    |||||||  |||||||||||||||||||||||| || |||||| ||||  || | ||||||||||||| | ||| | ||| ||||| |||||  ||||||    
T  12495099 tgggttttggtttttcccgatttcaaaacacggatatgggacgtgtaacgggtatataggtacccacctcgaacccatacccaaacccgtcccaaatgta 12495000  T
Q  189 gaaaa 193  Q
    |||||    
T  12494999 gaaaa 12494995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 88 - 136
Target Start/End: Original strand, 16433166 - 16433214
Alignment:
Q  88 ttgggtttgagtttttcccgatttcaaaacacgggtacgggacgggtaa 136  Q
    |||||||||||||||  |||||||||||||||||||| |||||||||||    
T  16433166 ttgggtttgagttttctccgatttcaaaacacgggtatgggacgggtaa 16433214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 89 - 193
Target Start/End: Complemental strand, 28298023 - 28297919
Alignment:
Q  89 tgggtttgagtttttcccgatttcaaaacacgggtacgggacgggtaatagggagataggtacccaccccaaactcgtactcaaactcgtccggaatgta 188  Q
    ||||| |||||||| |||||| || ||||||||||| |||||||||||  || | ||||||||||||||| ||| | ||| ||||| |||||  ||||||    
T  28298023 tgggtatgagttttccccgatctcgaaacacgggtatgggacgggtaacgggtatataggtacccaccccgaacccatacccaaacccgtcccaaatgta 28297924  T
Q  189 gaaaa 193  Q
     ||||    
T  28297923 aaaaa 28297919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 89 - 193
Target Start/End: Original strand, 49250773 - 49250877
Alignment:
Q  89 tgggtttgagtttttcccgatttcaaaacacgggtacgggacgggtaatagggagataggtacccaccccaaactcgtactcaaactcgtccggaatgta 188  Q
    ||||| |||||||| |||||| |||||||||||||| |||||||||||| || | ||||||| ||||| | ||| | ||| ||||| |||||  ||||||    
T  49250773 tgggtatgagttttccccgatctcaaaacacgggtatgggacgggtaatgggtatataggtatccacctcgaacccatacccaaacccgtcccaaatgta 49250872  T
Q  189 gaaaa 193  Q
     ||||    
T  49250873 aaaaa 49250877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 89 - 164
Target Start/End: Original strand, 45866185 - 45866260
Alignment:
Q  89 tgggtttgagtttttcccgatttcaaaacacgggtacgggacgggtaatagggagataggtacccaccccaaactc 164  Q
    ||||| || ||||| ||||||||||||||||||||| | ||| ||||||  | | |||||||||||||||||||||    
T  45866185 tgggtatgggttttccccgatttcaaaacacgggtatgagacaggtaatgagtatataggtacccaccccaaactc 45866260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 43 - 194
Target Start/End: Original strand, 24236709 - 24236866
Alignment:
Q  43 ccgaatcaatctcactttgacgtgttttttccgttttgactgaattt------gggtttgagtttttcccgatttcaaaacacgggtacgggacgggtaa 136  Q
    ||||| ||| |||| ||||||| |||||| ||||||||||||  |||      |||| || ||||| |||||| |||||||||||||| || ||||| ||    
T  24236709 ccgaaccaaactcaatttgacgggtttttcccgttttgactgggtttaggtatgggtatgggttttccccgatctcaaaacacgggtatggaacggggaa 24236808  T
Q  137 tagggagataggtacccaccccaaactcgtactcaaactcgtccggaatgtagaaaat 194  Q
      || | ||||||||||||||| ||| | ||||||||| |||||  |||||| |||||    
T  24236809 cgggtatataggtacccaccccgaacccatactcaaacccgtcccaaatgtaaaaaat 24236866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 92 - 194
Target Start/End: Complemental strand, 34085321 - 34085219
Alignment:
Q  92 gtttgagtttttcccgatttcaaaacacgggtacgggacgggtaatagggagataggtacccaccccaaactcgtactcaaactcgtccggaatgtagaa 191  Q
    ||||| ||||||||||||||||||||||| ||| |||| ||||||  |||  ||| ||||||||||| ||| | ||| || ||||||||  |||||| ||    
T  34085321 gtttgggtttttcccgatttcaaaacacgagtatgggatgggtaacggggttatatgtacccaccccgaacccatacccatactcgtcctaaatgtaaaa 34085222  T
Q  192 aat 194  Q
    |||    
T  34085221 aat 34085219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 209 - 330
Target Start/End: Original strand, 45460163 - 45460285
Alignment:
Q  209 ttttatataaatagaaaccaaaactc-tgaatcatttcacccacacagttagagtttcagttttttagatgacatccacttattatagttctctcttttc 307  Q
    ||||||||||||||||||  |||| | | ||||||||||| |||||| |   ||||||| | ||| ||||||||  |||||||  || || |||||||||    
T  45460163 ttttatataaatagaaacataaacccctaaatcatttcactcacacaatcgcagtttcaatctttcagatgacactcacttatcgtaattttctcttttc 45460262  T
Q  308 tccttctatatctcacactctcg 330  Q
    ||||| | |||||||||||||||    
T  45460263 tccttatgtatctcacactctcg 45460285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 98 - 171
Target Start/End: Original strand, 3627994 - 3628067
Alignment:
Q  98 gtttttcccgatttcaaaacacgggtacgggacgggtaatagggagataggtacccaccccaaactcgtactca 171  Q
    ||||| ||||||||||||||||||||| |||||||||||  || |  |||||||||||||| ||| | ||||||    
T  3627994 gttttccccgatttcaaaacacgggtatgggacgggtaacgggtatgtaggtacccaccccgaacccatactca 3628067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 89 - 162
Target Start/End: Complemental strand, 5181128 - 5181055
Alignment:
Q  89 tgggtttgagtttttcccgatttcaaaacacgggtacgggacgggtaatagggagataggtacccaccccaaac 162  Q
    ||||| || ||||| ||||||||||||| ||||||| |||||||||||  || | ||||| |||||||||||||    
T  5181128 tgggtatgggttttccccgatttcaaaatacgggtatgggacgggtaacgggtatataggcacccaccccaaac 5181055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 287 - 336
Target Start/End: Complemental strand, 14903031 - 14902982
Alignment:
Q  287 ttattatagttctctcttttctccttctatatctcacactctcggtctct 336  Q
    |||| |||||||||||||||||||||| |||||||||| |||||| ||||    
T  14903031 ttatcatagttctctcttttctccttccatatctcacaatctcggcctct 14902982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 89 - 158
Target Start/End: Complemental strand, 16409031 - 16408962
Alignment:
Q  89 tgggtttgagtttttcccgatttcaaaacacgggtacgggacgggtaatagggagataggtacccacccc 158  Q
    ||||| || ||||| ||| ||||||||||||||||| ||||||||||| ||| | ||||||||| |||||    
T  16409031 tgggtatgggttttccccaatttcaaaacacgggtatgggacgggtaacaggtatataggtaccgacccc 16408962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 89 - 158
Target Start/End: Complemental strand, 23058555 - 23058486
Alignment:
Q  89 tgggtttgagtttttcccgatttcaaaacacgggtacgggacgggtaatagggagataggtacccacccc 158  Q
    ||||||||||||||  ||||||||||||  || ||||| |||||||||  |||| |||||||||||||||    
T  23058555 tgggtttgagttttctccgatttcaaaatgcgagtacgagacgggtaacggggatataggtacccacccc 23058486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 89 - 194
Target Start/End: Complemental strand, 29936505 - 29936400
Alignment:
Q  89 tgggtttgagtttttcccgatttcaaaacacgggtacgggacgggtaatagggagataggtacccaccccaaactcgtactcaaactcgtccggaatgta 188  Q
    ||||| || ||||| |||||| |||||| ||||||| |||||||||||  || | ||||||||||||||| ||| | ||| ||||| |||||  ||||||    
T  29936505 tgggtatgggttttccccgatctcaaaatacgggtatgggacgggtaacgggtatataggtacccaccccgaacccatacccaaacccgtcccaaatgta 29936406  T
Q  189 gaaaat 194  Q
     |||||    
T  29936405 aaaaat 29936400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 89 - 158
Target Start/End: Original strand, 34673282 - 34673351
Alignment:
Q  89 tgggtttgagtttttcccgatttcaaaacacgggtacgggacgggtaatagggagataggtacccacccc 158  Q
    |||||||| ||||||||| ||||||||||||||||| | ||| |||||  || | |||||||||||||||    
T  34673282 tgggtttgggtttttcccaatttcaaaacacgggtatgagactggtaacgggtatataggtacccacccc 34673351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 186 - 246
Target Start/End: Complemental strand, 2581564 - 2581505
Alignment:
Q  186 gtagaaaatcaatttattactcattttatataaatagaaaccaaaactctgaatcatttca 246  Q
    |||||||||||||||| || || ||||||||||||||||||  ||||||| ||||||||||    
T  2581564 gtagaaaatcaatttaata-tccttttatataaatagaaactcaaactctaaatcatttca 2581505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 108 - 192
Target Start/End: Original strand, 10450078 - 10450162
Alignment:
Q  108 atttcaaaacacgggtacgggacgggtaatagggagataggtacccaccccaaactcgtactcaaactcgtccggaatgtagaaa 192  Q
    |||| |||| ||||||||||| ||||||| ||||| ||| ||||||||||| ||||| ||| ||||| |  || |||||||||||    
T  10450078 attttaaaatacgggtacggggcgggtaacagggatatatgtacccaccccgaactcatacccaaaccctacccgaatgtagaaa 10450162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 89 - 157
Target Start/End: Original strand, 36187220 - 36187288
Alignment:
Q  89 tgggtttgagtttttcccgatttcaaaacacgggtacgggacgggtaatagggagataggtacccaccc 157  Q
    ||||| || ||||| |||||| |||||||||||||| |||||||||||  || | ||||||||||||||    
T  36187220 tgggtatgggttttccccgatctcaaaacacgggtatgggacgggtaacgggtatataggtacccaccc 36187288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 287 - 330
Target Start/End: Complemental strand, 14891053 - 14891010
Alignment:
Q  287 ttattatagttctctcttttctccttctatatctcacactctcg 330  Q
    |||| |||||||||||||||||||||| |||||||||| |||||    
T  14891053 ttataatagttctctcttttctccttccatatctcacaatctcg 14891010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 89 - 155
Target Start/End: Original strand, 34060025 - 34060091
Alignment:
Q  89 tgggtttgagtttttcccgatttcaaaacacgggtacgggacgggtaatagggagataggtacccac 155  Q
    ||||| |||||||| | ||||||||||||||||||| | ||||| ||| ||| | ||||||||||||    
T  34060025 tgggtatgagttttcctcgatttcaaaacacgggtatgagacggataacaggtatataggtacccac 34060091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 92 - 162
Target Start/End: Original strand, 35936832 - 35936902
Alignment:
Q  92 gtttgagtttttcccgatttcaaaacacgggtacgggacgggtaatagggagataggtacccaccccaaac 162  Q
    ||||| ||||| |||||||||||| |||| ||| ||||||| |||  || | |||||||||||||||||||    
T  35936832 gtttgggttttccccgatttcaaatcacgagtatgggacggataacgggtatataggtacccaccccaaac 35936902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 90 - 128
Target Start/End: Complemental strand, 49098368 - 49098330
Alignment:
Q  90 gggtttgagtttttcccgatttcaaaacacgggtacggg 128  Q
    |||||||||||||| |||||||||||| |||||||||||    
T  49098368 gggtttgagttttttccgatttcaaaatacgggtacggg 49098330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 83 - 136
Target Start/End: Original strand, 18354074 - 18354127
Alignment:
Q  83 tgaatttgggtttgagtttttcccgatttcaaaacacgggtacgggacgggtaa 136  Q
    ||||| ||||| || ||||| ||||||||||||||| ||||| |||||||||||    
T  18354074 tgaatatgggtatgggttttccccgatttcaaaacatgggtatgggacgggtaa 18354127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 89 - 158
Target Start/End: Original strand, 23490771 - 23490840
Alignment:
Q  89 tgggtttgagtttttcccgatttcaaaacacgggtacgggacgggtaatagggagataggtacccacccc 158  Q
    ||||| || ||||| |||||| || ||||||||||| |||||||||||  || | |||||||||||||||    
T  23490771 tgggtatgggttttccccgatctcgaaacacgggtatgggacgggtaacgggtatataggtacccacccc 23490840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 89 - 194
Target Start/End: Original strand, 40087464 - 40087568
Alignment:
Q  89 tgggtttgagtttttcccgatttcaaaacacgggtacgggacgggtaatagggagataggtacccaccccaaactcgtactcaaactcgtccggaatgta 188  Q
    ||||| |||||||| ||||||| |||||||| |||| |||| | ||||  || | ||||||||||||||| ||||| |||||| || |||||  ||||||    
T  40087464 tgggtatgagttttccccgatt-caaaacacaggtatgggatgagtaacgggaatataggtacccaccccgaactcatactcatacccgtcccaaatgta 40087562  T
Q  189 gaaaat 194  Q
     |||||    
T  40087563 aaaaat 40087568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 95 - 136
Target Start/End: Original strand, 42707843 - 42707884
Alignment:
Q  95 tgagtttttcccgatttcaaaacacgggtacgggacgggtaa 136  Q
    ||||||||  |||||||||||||||||||| |||||||||||    
T  42707843 tgagttttctccgatttcaaaacacgggtatgggacgggtaa 42707884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 89 - 137
Target Start/End: Complemental strand, 23968668 - 23968620
Alignment:
Q  89 tgggtttgagtttttcccgatttcaaaacacgggtacgggacgggtaat 137  Q
    ||||| || ||||| |||| |||||||||||||||| ||||||||||||    
T  23968668 tgggtatgggttttccccggtttcaaaacacgggtatgggacgggtaat 23968620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 98 - 154
Target Start/End: Complemental strand, 24710927 - 24710871
Alignment:
Q  98 gtttttcccgatttcaaaacacgggtacgggacgggtaatagggagataggtaccca 154  Q
    ||||| |||||| |||||||||||||| |||||||||||  || | |||||||||||    
T  24710927 gttttccccgatctcaaaacacgggtatgggacgggtaacgggtatataggtaccca 24710871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 88; Significance: 3e-42; HSPs: 40)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 89 - 336
Target Start/End: Complemental strand, 25210466 - 25210219
Alignment:
Q  89 tgggtttgagtttttcccgatttcaaaacacgggtacgggacgggtaatagggagataggtacccaccccaaactcgtactcaaactcgtccggaatgta 188  Q
    |||||||  ||||||||||| || |||||||||||| |||||||||||   ||| ||| ||||||||||||||| | |||  |||| | ||| |||||||    
T  25210466 tgggtttaggtttttcccgactttaaaacacgggtatgggacgggtaacgaggatatatgtacccaccccaaacccataccaaaacccctcccgaatgta 25210367  T
Q  189 gaaaatcaatttattactcattttatataaatagaaaccaaaactctgaatcatttcacccacacagttagagtttcagttttttagatgacatccactt 288  Q
    |||||||||||| |||| ||||||||||||||||||||  |||| || ||||||||||| ||||||||  |||| ||||  ||||||||| ||  |||||    
T  25210366 gaaaatcaatttgttacccattttatataaatagaaactcaaaccctaaatcatttcactcacacagtcggagtctcagaattttagatggcactcactt 25210267  T
Q  289 attatagttctctcttttctccttctatatctcacactctcggtctct 336  Q
    || |||||| ||||||||| ||||  ||  ||||||||||||| ||||    
T  25210266 atcatagttatctcttttcacctttcatggctcacactctcggactct 25210219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 90 - 326
Target Start/End: Original strand, 35248386 - 35248618
Alignment:
Q  90 gggtttgagtttttcccgatttcaaaacacgggtacgggacgggtaatagggagataggtacccaccccaaactcgtactcaaactcgtccggaatgtag 189  Q
    ||||||| ||||| | ||||| ||||||||||||| |||||||||||  |||| | ||||||||||||| ||| | ||| ||||| ||||| ||||||||    
T  35248386 gggtttgggttttccacgattacaaaacacgggtatgggacgggtaaaggggataaaggtacccaccccgaacccatacccaaacccgtcctgaatgtag 35248485  T
Q  190 aaaatcaatttattactcattttatataaatagaaaccaaaactctgaatcatttcacccacacagttagagtttcagttttttagatgacatccactta 289  Q
    ||||   || ||| || | |||||||||||||||||   |||| || ||||||||||| |||||||  ||||| ||||| ||| | ||||||  | ||||    
T  35248486 aaaa---atatat-accccttttatataaatagaaaatgaaaccctaaatcatttcactcacacagacagagtctcagtctttcaaatgacactcgctta 35248581  T
Q  290 ttatagttctctcttttctccttctatatctcacact 326  Q
    ||||||||||||||| |||||||| ||||||||||||    
T  35248582 ttatagttctctcttatctccttccatatctcacact 35248618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 88 - 330
Target Start/End: Complemental strand, 35965424 - 35965182
Alignment:
Q  88 ttgggtttgagtttttcccgatttcaaaacacgggtacgggacgggtaatagggagataggtacccaccccaaactcgtactcaaactcgtccggaatgt 187  Q
    ||||||||||||||| |||||||||||||||||||||  ||| | ||||| |||| | | |||||||| || ||| | ||| ||||| ||||| ||||||    
T  35965424 ttgggtttgagttttccccgatttcaaaacacgggta-tggatgtgtaatggggatacatgtacccactccgaacccatacccaaacccgtcccgaatgt 35965326  T
Q  188 agaaaatcaatttattactcattttata-taaatagaaaccaaaactctgaatcatttcacccacacagttagagtttcagttttttagatgacatccac 286  Q
    |||||||||||||||| | | ||||||| ||||||| ||   || |  | ||||||||||| || ||||| ||  | ||||||||| |||| |||| |||    
T  35965325 agaaaatcaatttattgccccttttatactaaataggaattgaatccataaatcatttcactcatacagtgaggatctcagtttttcagataacattcac 35965226  T
Q  287 ttattatagttctctcttttctccttctatatctcacactctcg 330  Q
    |||| |||||||||| || |||||||| ||||||||||||||||    
T  35965225 ttatcatagttctcttttatctccttccatatctcacactctcg 35965182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 99 - 336
Target Start/End: Original strand, 34544320 - 34544558
Alignment:
Q  99 tttttcccgatttcaaaa-cacgggtacgggacgggtaatagggagataggtacccaccccaaactcgtactcaaactcgtccggaatgtagaaaatcaa 197  Q
    |||| ||||||||||||| ||||| |||| || | |||| || || |||| ||||||| | |||||| ||||||||| | ||| |||||||||||||| |    
T  34544320 ttttccccgatttcaaaaacacggatacgagatgtgtaacagagatatagatacccacacaaaactcatactcaaacccctcccgaatgtagaaaatcta 34544419  T
Q  198 tttattactcattttatataaatagaaaccaaaactctgaatcatttcacccacacagttagagtttcagttttttagatgacatccacttattatagtt 297  Q
    |||||||| ||||||||||||||| ||||  |||| || ||| ||||||  ||||||   ||| | ||  | ||||||||||||  ||||| | ||||||    
T  34544420 tttattacccattttatataaataaaaactcaaaccctaaataatttcattcacacaacgagactctcgttcttttagatgacaatcacttctcatagtt 34544519  T
Q  298 ctctcttttctccttctatatctcacactctcggtctct 336  Q
    |||||||| ||||||| ||||||||||||||| ||||||    
T  34544520 ctctctttactccttccatatctcacactctcagtctct 34544558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 92 - 336
Target Start/End: Original strand, 34214660 - 34214903
Alignment:
Q  92 gtttgagtttttcccgatttcaaaacacgggtacgggacgggtaatagggagataggtacccaccccaaactcgtactcaaactcgtccggaatgtagaa 191  Q
    ||||||||||||| | |||||||||||||||||||||||  |||   |  | || || ||||||  | ||||| ||||||||| |||||   ||||||||    
T  34214660 gtttgagtttttctcaatttcaaaacacgggtacgggacatgtatcggttatattggcacccacttcgaactcatactcaaacccgtcctagatgtagaa 34214759  T
Q  192 aatcaatttattactcattttatataaatagaaaccaaaactctgaatcatttcacccacacagttagagtttcagttttttagatgacatccacttatt 291  Q
    | |||||||||| | |  |||||||||||||||||  || |||| |||||||||||  ||||||| ||||| ||||| ||| | ||||||  |||||||     
T  34214760 agtcaatttattgccctgtttatataaatagaaactcaa-ctctaaatcatttcactaacacagtcagagtctcagtctttcacatgacactcacttatc 34214858  T
Q  292 atagttctctcttttctccttctatatctcacactctcggtctct 336  Q
    ||||||| |||||||||||||| |||||||||||| |||| ||||    
T  34214859 atagttcgctcttttctccttcgatatctcacactttcggcctct 34214903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 107 - 329
Target Start/End: Complemental strand, 30696995 - 30696773
Alignment:
Q  107 gatttcaaaacacgggtacgggacgggtaatagggagataggtacccaccccaaactcgtactcaaactcgtccggaatgtagaaaatcaatttattact 206  Q
    ||||| |||||| || |||| ||||||||| || || ||| ||||||||||| ||||| ||| |||||   |||  |||||| ||||||||||||||||     
T  30696995 gattttaaaacatggatacgagacgggtaacagagatatatgtacccaccccgaactcatacccaaacctatcccaaatgtaaaaaatcaatttattacc 30696896  T
Q  207 cattttatataaatagaaaccaaaactctgaatcatttcacccacacagttagagtttcagttttttagatgacatccacttattatagttctctctttt 306  Q
    |||||||||||||||||||   |||| || |||||| |||| |||||||||||||| || || ||| | ||||||| | ||||  |||||||||| ||||    
T  30696895 cattttatataaatagaaattcaaaccctaaatcatgtcactcacacagttagagtctcggtctttcatatgacattctcttaccatagttctctatttt 30696796  T
Q  307 ctccttctatatctcacactctc 329  Q
    |||||    ||||||||||||||    
T  30696795 ctcctctcgtatctcacactctc 30696773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 194 - 326
Target Start/End: Original strand, 31600873 - 31601005
Alignment:
Q  194 tcaatttattactcattttatataaatagaaaccaaaactctgaatcatttcacccacacagttagagtttcagttttttagatgacatccacttattat 293  Q
    |||||||| ||| | ||||||||||||||||||  ||||||| ||||||||||| || ||||||||||| | ||| ||| | |||||   ||||||| ||    
T  31600873 tcaatttaatacgccttttatataaatagaaactcaaactctaaatcatttcactcatacagttagagtcttagtctttcatatgacgctcacttatcat 31600972  T
Q  294 agttctctcttttctccttctatatctcacact 326  Q
    ||||||||||| | |||||| ||||||||||||    
T  31600973 agttctctcttctatccttccatatctcacact 31601005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 166 - 312
Target Start/End: Complemental strand, 13954757 - 13954611
Alignment:
Q  166 tactcaaactcgtccggaatgtagaaaatcaatttattactcattttatataaatagaaaccaaaactctgaatcatttcacccacacagttagagtttc 265  Q
    ||||||||| ||||  ||| |||||||||||| |||||||   ||||||||||||||||||   ||| || ||||||||||| ||| | || ||||| ||    
T  13954757 tactcaaacccgtctcgaacgtagaaaatcaacttattaccacttttatataaatagaaactcgaaccctaaatcatttcactcactcggtgagagtctc 13954658  T
Q  266 agttttttagatgacatccacttattatagttctctcttttctcctt 312  Q
    ||  ||| ||||||||  ||||||| |||||||||||||||||||||    
T  13954657 agactttcagatgacactcacttatgatagttctctcttttctcctt 13954611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 166 - 312
Target Start/End: Complemental strand, 14095964 - 14095818
Alignment:
Q  166 tactcaaactcgtccggaatgtagaaaatcaatttattactcattttatataaatagaaaccaaaactctgaatcatttcacccacacagttagagtttc 265  Q
    ||||||||| ||||  ||| |||||||||||| |||||||   ||||||||||||||||||   ||| || ||||||||||| ||| | || ||||| ||    
T  14095964 tactcaaacccgtctcgaacgtagaaaatcaacttattaccacttttatataaatagaaactcgaaccctaaatcatttcactcactcggtgagagtctc 14095865  T
Q  266 agttttttagatgacatccacttattatagttctctcttttctcctt 312  Q
    ||  ||| ||||||||  ||||||| |||||||||||||||||||||    
T  14095864 agactttcagatgacactcacttatgatagttctctcttttctcctt 14095818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 91 - 192
Target Start/End: Complemental strand, 43371640 - 43371539
Alignment:
Q  91 ggtttgagtttttcccgatttcaaaacacgggtacgggacgggtaatagggagataggtacccaccccaaactcgtactcaaactcgtccggaatgtaga 190  Q
    |||||||||||| |||||||| |||| |||||||||||||||||||  |||| ||| ||||||||||||||||| ||| ||||| |  || |||||||||    
T  43371640 ggtttgagttttccccgattttaaaatacgggtacgggacgggtaacggggatatatgtacccaccccaaactcatacccaaaccctacccgaatgtaga 43371541  T
Q  191 aa 192  Q
    ||    
T  43371540 aa 43371539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 183 - 336
Target Start/End: Original strand, 29656829 - 29656983
Alignment:
Q  183 aatgtagaaaatcaatttattactcattttatataaatagaaaccaaaactctgaatcatttcacccacacagttagagtttcagttttttagatgacat 282  Q
    |||||| |||||||||||||||  | ||||||||||||| |||||| ||| || |||||||| || |||||||| | ||| ||||| ||| ||||||||     
T  29656829 aatgtataaaatcaatttattatcccttttatataaataaaaaccataaccctaaatcatttgactcacacagtcaaagtctcagtctttcagatgacac 29656928  T
Q  283 ccac-ttattatagttctctcttttctccttctatatctcacactctcggtctct 336  Q
      || |||| ||| ||||||||| |||||||  |||||||||| |||||| ||||    
T  29656929 tgactttatcataattctctcttatctccttacatatctcacattctcggcctct 29656983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 93 - 202
Target Start/End: Original strand, 44746113 - 44746222
Alignment:
Q  93 tttgagtttttcccgatttcaaaacacgggtacgggacgggtaatagggagataggtacccaccccaaactcgtactcaaactcgtccggaatgtagaaa 192  Q
    |||| ||||| |||||||||||||||||  || |||||||||||| || | ||| ||||||||  ||||||| ||||||||| |||||  ||||||||||    
T  44746113 tttgggttttccccgatttcaaaacacgaatatgggacgggtaatgggtatatatgtacccacttcaaactcatactcaaacccgtcccaaatgtagaaa 44746212  T
Q  193 atcaatttat 202  Q
    |||| |||||    
T  44746213 atcactttat 44746222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 98 - 336
Target Start/End: Complemental strand, 40359424 - 40359188
Alignment:
Q  98 gtttttcccgatttcaaaacacgggtacgggacgggtaatagggagataggtacccaccccaaactcgtactcaaactcgtccggaatgtagaaaatcaa 197  Q
    |||||||||||||| | ||||| |||| | || || ||| ||||| ||||||||||| | | ||||  |||||||||   ||   |||||| ||||||||    
T  40359424 gtttttcccgattttagaacaccggtatgagatggataacagggatataggtacccatctcgaactaatactcaaacctctctcaaatgtaaaaaatcaa 40359325  T
Q  198 tttattactcattttatataaatagaaaccaaaactctgaatcatttcacccacacagttagagtttcagttttttagatgacatccacttattatagtt 297  Q
    ||||||||   ||||||||||||||||||  ||| ||| ||||||||||  ||| |||||||||| ||| | | | | ||||||  ||||| ||| |||     
T  40359324 tttattacatcttttatataaatagaaactcaaagtctaaatcatttcagtcacgcagttagagtctcaatctctcatatgacactcactttttagagt- 40359226  T
Q  298 ctctcttttctccttctatatctcacactctcggtctct 336  Q
     |||||||| |||||| || |||| || |||||||||||    
T  40359225 -tctcttttatccttccatgtctcgcattctcggtctct 40359188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 100 - 194
Target Start/End: Original strand, 8915948 - 8916042
Alignment:
Q  100 ttttcccgatttcaaaacacgggtacgggacgggtaatagggagataggtacccaccccaaactcgtactcaaactcgtccggaatgtagaaaat 194  Q
    ||||| |||| |||||||||||||| ||||||||||| ||| | ||||||||||||||| ||| | ||||||||| |||||  |||||| |||||    
T  8915948 ttttctcgatctcaaaacacgggtatgggacgggtaacaggtatataggtacccaccccgaacccatactcaaacccgtcccaaatgtaaaaaat 8916042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 184 - 254
Target Start/End: Complemental strand, 13531943 - 13531873
Alignment:
Q  184 atgtagaaaatcaatttattactcattttatataaatagaaaccaaaactctgaatcatttcacccacaca 254  Q
    |||||||||||||||||||||  ||||||||||||||||||||  |||| || ||||||||||| ||||||    
T  13531943 atgtagaaaatcaatttattatccattttatataaatagaaactcaaaccctaaatcatttcactcacaca 13531873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 88 - 193
Target Start/End: Original strand, 6027888 - 6027993
Alignment:
Q  88 ttgggtttgagtttttcccgatttcaaaacacgggtacgggacgggtaatagggagataggtacccaccccaaactcgtactcaaactcgtccggaatgt 187  Q
    ||||||||| ||||| |||||||| |||||| ||||| | ||||||||| ||| | ||||||||||||||| ||| | |||||| || ||||| |||||     
T  6027888 ttgggtttgggttttccccgattttaaaacatgggtatgagacgggtaacaggtatataggtacccaccccgaacccatactcatacccgtcctgaatgc 6027987  T
Q  188 agaaaa 193  Q
    ||||||    
T  6027988 agaaaa 6027993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 98 - 193
Target Start/End: Original strand, 24414141 - 24414236
Alignment:
Q  98 gtttttcccgatttcaaaacacgggtacgggacgggtaatagggagataggtacccaccccaaactcgtactcaaactcgtccggaatgtagaaaa 193  Q
    ||||| |||||| |||||||||||||| ||||||||||| ||| | ||||||||||||||| ||| | ||| ||||| |||||  |||||| ||||    
T  24414141 gttttccccgatctcaaaacacgggtatgggacgggtaacaggtatataggtacccaccccgaacccatacccaaacccgtcccaaatgtaaaaaa 24414236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 182 - 336
Target Start/End: Original strand, 35409247 - 35409399
Alignment:
Q  182 gaatgtagaaaatcaatttattactcattttatataaatagaaaccaaaactctgaatcatttcacccacacagttagagtttcagttttttagatgaca 281  Q
    ||||||| ||||||||||| |||| | ||  ||||||||| ||||| ||||||| ||  |||||||  ||||||| ||||| ||||| ||  | ||||||    
T  35409247 gaatgtataaaatcaattttttacccgtt--atataaataaaaacccaaactctaaactatttcacttacacagtcagagtctcagtcttacatatgaca 35409344  T
Q  282 tccacttattatagttctctcttttctccttctatatctcacactctcggtctct 336  Q
      ||||||| |||||||  |||||||| | || ||||||||||||||||| ||||    
T  35409345 ctcacttatcatagttcattcttttcttcgtccatatctcacactctcggcctct 35409399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 89 - 192
Target Start/End: Original strand, 38342519 - 38342622
Alignment:
Q  89 tgggtttgagtttttcccgatttcaaaacacgggtacgggacgggtaatagggagataggtacccaccccaaactcgtactcaaactcgtccggaatgta 188  Q
    |||||||||||||| |||||||| |||| |||| ||||||||||||||  |||| ||| ||||||||||| ||| | ||| ||||| |  || |||||||    
T  38342519 tgggtttgagttttccccgattttaaaatacggatacgggacgggtaacggggatatatgtacccaccccgaacccatacccaaaccctacccgaatgta 38342618  T
Q  189 gaaa 192  Q
    ||||    
T  38342619 gaaa 38342622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 117 - 205
Target Start/End: Original strand, 4961479 - 4961567
Alignment:
Q  117 cacgggtacgggacgggtaatagggagataggtacccaccccaaactcgtactcaaactcgtccggaatgtagaaaatcaatttattac 205  Q
    |||||||| |||||| |||| ||||| |||||||| |||| | ||| | ||| ||||||||||| |||| |||||||| ||||||||||    
T  4961479 cacgggtatgggacgtgtaacagggatataggtacacacctcgaacccatacccaaactcgtcccgaatatagaaaatgaatttattac 4961567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 89 - 136
Target Start/End: Complemental strand, 15546833 - 15546786
Alignment:
Q  89 tgggtttgagtttttcccgatttcaaaacacgggtacgggacgggtaa 136  Q
    |||||||| ||||| ||||||||||||||||||||| |||||||||||    
T  15546833 tgggtttgggttttccccgatttcaaaacacgggtatgggacgggtaa 15546786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 88 - 226
Target Start/End: Original strand, 17845390 - 17845529
Alignment:
Q  88 ttgggtttgagtttttcccgatttcaaaacacgggtacgggacgggtaatagggagataggtacccaccccaaactcgtactcaaactcgtccggaatgt 187  Q
    |||||||||||||||   ||||||||||||||| ||| | ||| |||||| |  | ||| ||||||||||  ||| | ||| ||||| ||||  ||||||    
T  17845390 ttgggtttgagttttcttcgatttcaaaacacgagtatgagaccggtaatggacatataagtacccacccttaacccatacccaaacccgtctcgaatgt 17845489  T
Q  188 agaaaa-tcaatttattactcattttatataaatagaaac 226  Q
    | |||| |||||||||||  | ||||||||||||||||||    
T  17845490 aaaaaaatcaatttattatcctttttatataaatagaaac 17845529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 89 - 136
Target Start/End: Complemental strand, 22900883 - 22900836
Alignment:
Q  89 tgggtttgagtttttcccgatttcaaaacacgggtacgggacgggtaa 136  Q
    |||||||| ||||||||||||||||||||||||||| |||||| ||||    
T  22900883 tgggtttgggtttttcccgatttcaaaacacgggtatgggacgagtaa 22900836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 98 - 156
Target Start/End: Original strand, 12193836 - 12193894
Alignment:
Q  98 gtttttcccgatttcaaaacacgggtacgggacgggtaatagggagataggtacccacc 156  Q
    |||||||||||||||| |||||||||| |||||||||||| || | |||| ||||||||    
T  12193836 gtttttcccgatttcagaacacgggtatgggacgggtaatgggtatatagatacccacc 12193894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 89 - 155
Target Start/End: Complemental strand, 37106781 - 37106715
Alignment:
Q  89 tgggtttgagtttttcccgatttcaaaacacgggtacgggacgggtaatagggagataggtacccac 155  Q
    ||||| || ||||| ||||||||||||||||||||| |||||||||||  || | ||||||||||||    
T  37106781 tgggtatgggttttccccgatttcaaaacacgggtatgggacgggtaacgggtatataggtacccac 37106715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 76 - 194
Target Start/End: Complemental strand, 37999585 - 37999467
Alignment:
Q  76 ttttgactgaatttgggtttgagtttttcccgatttcaaaacacgggtacgggacgggtaatagggagataggtacccaccccaaactcgtactcaaact 175  Q
    |||||||||  | ||||| || ||||| |||||| |||||||||||||| | |||||||||  || | ||| ||||||||||| ||||| ||| |||||     
T  37999585 ttttgactgggtatgggtatgggttttccccgatctcaaaacacgggtatgagacgggtaacgggtatataagtacccaccccgaactcatacccaaacc 37999486  T
Q  176 cgtccggaatgtagaaaat 194  Q
    |||||  |||||| |||||    
T  37999485 cgtcccaaatgtaaaaaat 37999467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 93 - 158
Target Start/End: Complemental strand, 3547251 - 3547186
Alignment:
Q  93 tttgagtttttcccgatttcaaaacacgggtacgggacgggtaatagggagataggtacccacccc 158  Q
    |||| |||||| |||||||||||| |||||||||||||||||||  | || ||| |||||||||||    
T  3547251 tttgggtttttaccgatttcaaaatacgggtacgggacgggtaacggagatatatgtacccacccc 3547186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 89 - 158
Target Start/End: Original strand, 13705361 - 13705430
Alignment:
Q  89 tgggtttgagtttttcccgatttcaaaacacgggtacgggacgggtaatagggagataggtacccacccc 158  Q
    ||||| |||||||| ||||||||||||||||||||| | ||| |||||  || | |||||||||||||||    
T  13705361 tgggtatgagttttccccgatttcaaaacacgggtatgagacaggtaacgggtatataggtacccacccc 13705430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 296 - 336
Target Start/End: Original strand, 4961609 - 4961649
Alignment:
Q  296 ttctctcttttctccttctatatctcacactctcggtctct 336  Q
    |||||||||||||||||| |||||||||||||||| |||||    
T  4961609 ttctctcttttctccttccatatctcacactctcgatctct 4961649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 89 - 193
Target Start/End: Complemental strand, 9632475 - 9632371
Alignment:
Q  89 tgggtttgagtttttcccgatttcaaaacacgggtacgggacgggtaatagggagataggtacccaccccaaactcgtactcaaactcgtccggaatgta 188  Q
    ||||| || ||||| |||||| || ||||||||||| |||||||||||| || | ||||||| ||||||| ||| | ||| ||||| |||||  ||||||    
T  9632475 tgggtatgggttttccccgatctcgaaacacgggtatgggacgggtaatgggtatataggtatccaccccgaacccatacccaaacccgtcccaaatgta 9632376  T
Q  189 gaaaa 193  Q
     ||||    
T  9632375 aaaaa 9632371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 43 - 136
Target Start/End: Original strand, 37472707 - 37472806
Alignment:
Q  43 ccgaatcaatctcactttgacgtgttttttccgttttgactgaatttgggtttgag------tttttcccgatttcaaaacacgggtacgggacgggtaa 136  Q
    ||||| ||| |||| ||||||| |||||  ||||||||||||  ||||||| ||||      |||| ||||||||||||||||||||| |||||||||||    
T  37472707 ccgaaccaaactcaatttgacgggttttccccgttttgactgggtttgggtatgagtatggattttccccgatttcaaaacacgggtatgggacgggtaa 37472806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 95 - 203
Target Start/End: Complemental strand, 45256906 - 45256798
Alignment:
Q  95 tgagtttttcccgatttcaaaacacgggtacgggacgggtaatagggagataggtacccaccccaaactcgtactcaaactcgtccggaatgtagaaaat 194  Q
    |||||||| ||||||||||||||||||||| | ||||| |||| || | ||| ||||||||||| ||| | |||  |||| |||||  |||||| |||||    
T  45256906 tgagttttccccgatttcaaaacacgggtatgagacggttaatgggtatataagtacccaccccgaacccatacctaaacccgtcccaaatgtaaaaaat 45256807  T
Q  195 caatttatt 203  Q
     | ||||||    
T  45256806 tactttatt 45256798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 89 - 180
Target Start/End: Complemental strand, 30847035 - 30846944
Alignment:
Q  89 tgggtttgagtttttcccgatttcaaaacacgggtacgggacgggtaatagggagataggtacccaccccaaactcgtactcaaactcgtcc 180  Q
    ||||| || ||||| |||||| || ||||||||||| |||||||||||  || | ||||||||||||||| ||| | ||| ||||| |||||    
T  30847035 tgggtatgggttttccccgatctcgaaacacgggtatgggacgggtaacgggtatataggtacccaccccgaacccatacccaaacccgtcc 30846944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 213 - 268
Target Start/End: Original strand, 40734707 - 40734762
Alignment:
Q  213 atataaatagaaaccaaaactctgaatcatttcacccacacagttagagtttcagt 268  Q
    ||||||||| |||||||||| || ||||||||||| |||||||| ||||| |||||    
T  40734707 atataaataaaaaccaaaaccctaaatcatttcactcacacagtcagagtctcagt 40734762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 107 - 158
Target Start/End: Complemental strand, 44057954 - 44057903
Alignment:
Q  107 gatttcaaaacacgggtacgggacgggtaatagggagataggtacccacccc 158  Q
    |||||||||| || ||||||||||||||||| |||| ||| |||||||||||    
T  44057954 gatttcaaaataccggtacgggacgggtaatggggatatatgtacccacccc 44057903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 95 - 154
Target Start/End: Complemental strand, 45115641 - 45115582
Alignment:
Q  95 tgagtttttcccgatttcaaaacacgggtacgggacgggtaatagggagataggtaccca 154  Q
    |||||||| | ||||||||||||||||||| | ||||||||| ||| | |||||||||||    
T  45115641 tgagttttcctcgatttcaaaacacgggtatgagacgggtaacaggtatataggtaccca 45115582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 89 - 162
Target Start/End: Original strand, 35409167 - 35409240
Alignment:
Q  89 tgggtttgagtttttcccgatttcaaaacacgggtacgggacgggtaatagggagataggtacccaccccaaac 162  Q
    |||||||| ||||| ||||||||||||||||  ||||||||  |||||    || |||||||||||||||||||    
T  35409167 tgggtttgggttttccccgatttcaaaacactagtacgggaaaggtaacgtagatataggtacccaccccaaac 35409240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 122 - 281
Target Start/End: Complemental strand, 11959071 - 11958912
Alignment:
Q  122 gtacgggacgggtaatagggagataggtacccaccccaaactcgtactcaaactcgtccggaatgtagaaaatcaatttattactcattttatataaata 221  Q
    |||||||||||||||   ||| ||| ||||   |||| ||||| ||| ||||||| ||  ||||||| ||||||||||||||||   ||||||||||  |    
T  11959071 gtacgggacgggtaacgaggatatatgtacatgccccgaactcatacccaaactcatcatgaatgtataaaatcaatttattacctcttttatataagca 11958972  T
Q  222 gaaac-caaaactctgaatcatttcacccacacagttagagtttcagttttttagatgaca 281  Q
    ||||| |||||| ||  ||||||| ||  ||||||||||||| || || ||| ||||||||    
T  11958971 gaaactcaaaac-ctagatcatttaacttacacagttagagtctcggtctttcagatgaca 11958912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 93 - 157
Target Start/End: Original strand, 12285775 - 12285838
Alignment:
Q  93 tttgagtttttcccgatttcaaaacacgggtacgggacgggtaatagggagataggtacccaccc 157  Q
    ||||||||||  ||||||| ||||||| |||||| ||| ||||||||||| ||||| ||||||||    
T  12285775 tttgagttttctccgattt-aaaacacaggtacgagacaggtaatagggatatagggacccaccc 12285838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 83 - 127
Target Start/End: Complemental strand, 30979020 - 30978976
Alignment:
Q  83 tgaatttgggtttgagtttttcccgatttcaaaacacgggtacgg 127  Q
    ||||| || ||||| ||||||||||||||||||| ||||||||||    
T  30979020 tgaatatgagtttgggtttttcccgatttcaaaatacgggtacgg 30978976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 85; Significance: 2e-40; HSPs: 34)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 92 - 336
Target Start/End: Original strand, 40187661 - 40187904
Alignment:
Q  92 gtttgagtttttcccgatttcaaaacacgggtacgggacgggtaatagggagataggtacccaccccaaactcgtactcaaactcgtccggaatgtagaa 191  Q
    ||||| ||||| ||| |||||||||||||||| || |||||||||  | || |||||||  ||||| |||||| ||| ||||||||||| |||| |||||    
T  40187661 gtttgggttttccccaatttcaaaacacgggtgcgagacgggtaacggagatataggtattcaccc-aaactcatacccaaactcgtcccgaatatagaa 40187759  T
Q  192 aatcaatttattactcattttatataaatagaaaccaaaactctgaatcatttcacccacacagttagagtttcagttttttagatgacatccacttatt 291  Q
    ||| ||||||||||   |||||||||||||| ||  ||||  || |||||||| || |||| ||| ||||||||| | ||| ||||||||  |||||||     
T  40187760 aattaatttattacctcttttatataaatagtaatgaaaatcctaaatcattttactcacatagtcagagtttcaatctttcagatgacactcacttatc 40187859  T
Q  292 atagttctctcttttctccttctatatctcacactctcggtctct 336  Q
    ||||||||||||| |||| ||| ||||||||||||||||||||||    
T  40187860 atagttctctcttatctcattccatatctcacactctcggtctct 40187904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 91 - 330
Target Start/End: Original strand, 27900404 - 27900641
Alignment:
Q  91 ggtttgagtttttcccgatttcaaaacacgggtacgggacgggtaatagggagataggtacccaccccaaactcgtactcaaactcgtccggaatgtaga 190  Q
    |||||||||||||||||||||||||||| ||||| ||||||||||||  ||| ||||||||||| | | ||| | ||| ||||  || || ||||||| |    
T  27900404 ggtttgagtttttcccgatttcaaaacatgggtatgggacgggtaatgtggatataggtacccatctcgaacccatacccaaatccgccccgaatgtata 27900503  T
Q  191 aaatcaatttattactcattttatataaatagaaaccaaaactctgaatcatttcacccacacagttagagtttcagttttttagatgacatccacttat 290  Q
    ||||||||||||| |   ||||||||||||||||||  |||| || ||||||||||  |||||| | |||   ||||| ||| ||||||||  ||||||     
T  27900504 aaatcaatttatttcctcttttatataaatagaaactgaaaccctaaatcatttcagtcacacattcaga--atcagtctttcagatgacactcacttaa 27900601  T
Q  291 tatagttctctcttttctccttctatatctcacactctcg 330  Q
    |||||||||||||| |||||||  |||||||| |||||||    
T  27900602 tatagttctctcttatctccttacatatctcatactctcg 27900641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 92 - 330
Target Start/End: Complemental strand, 17153254 - 17153016
Alignment:
Q  92 gtttgagtttttcccgatttcaaaacacgggtacgggacgggtaatagggagataggtacccaccccaaactcgtactcaaactcgtccggaatgtagaa 191  Q
    |||||||||||| ||||||| |||||| ||||||||||||| |||    || ||| |||| || ||||||| | ||| ||||| ||||| ||||||||||    
T  17153254 gtttgagttttttccgattttaaaacatgggtacgggacggataactatgatatatgtactcatcccaaacccatacccaaacccgtcccgaatgtagaa 17153155  T
Q  192 aatcaatttattactcattttatataaatagaaa-ccaaaactctgaatcatttcacccacacagttagagtttcagttttttagatgacatccacttat 290  Q
    |||||||||||||| | || || ||||||||||| ||||||| || ||| ||||||| |||||||| |||   ||||| ||| | |||| || |||||||    
T  17153154 aatcaatttattaccccttctagataaatagaaatccaaaac-ctaaataatttcactcacacagtcagatactcagtctttcaaatgagattcacttat 17153056  T
Q  291 tatagttctctcttttctccttctatatctcacactctcg 330  Q
     |||||||||| |||||| |||| ||||||||||||||||    
T  17153055 catagttctctattttcttcttccatatctcacactctcg 17153016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 105 - 328
Target Start/End: Complemental strand, 29665043 - 29664820
Alignment:
Q  105 ccgatttcaaaacacgggtacgggacgggtaatagggagataggtacccaccccaaactcgtactcaaactcgtccggaatgtagaaaatcaatttatta 204  Q
    |||||||||||||||||||||  || ||||||  |||| ||||||||||||  | ||||| ||| ||||| ||||| ||||||| |||||||||||| ||    
T  29665043 ccgatttcaaaacacgggtacatgatgggtaacggggatataggtacccacttcgaactcatacccaaacccgtcccgaatgtacaaaatcaatttacta 29664944  T
Q  205 ctcattttatataaatagaaaccaaaactctgaatcatttcacccacacagttagagtttcagttttttagatgacatccacttattatagttctctctt 304  Q
    | | |||||| |||||||||||  ||||||| ||||||||||   |||  || ||||| ||||| ||| ||||||||  ||||||| ||| |||||||||    
T  29664943 ccccttttatttaaatagaaactcaaactctaaatcatttcatttacattgtcagagtctcagtatttcagatgacactcacttatcataattctctctt 29664844  T
Q  305 ttctccttctatatctcacactct 328  Q
    ||||| ||| |||||| |||||||    
T  29664843 ttctctttcaatatctaacactct 29664820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 92 - 230
Target Start/End: Original strand, 16311297 - 16311435
Alignment:
Q  92 gtttgagtttttcccgatttcaaaacacgggtacgggacgggtaatagggagataggtacccaccccaaactcgtactcaaactcgtccggaatgtagaa 191  Q
    |||||||||||| |||||||||||||||| ||||| ||||| ||| ||||| ||||||||||||||| ||| | || ||||||  |||  |||||| |||    
T  16311297 gtttgagttttttccgatttcaaaacacgagtacgagacggataacagggatataggtacccaccccgaacccatattcaaacctgtctcgaatgttgaa 16311396  T
Q  192 aatcaatttattactcattttatataaatagaaaccaaa 230  Q
    |||||||||||||  | ||||||||||||||||||||||    
T  16311397 aatcaatttattatcccttttatataaatagaaaccaaa 16311435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 92 - 336
Target Start/End: Complemental strand, 38973007 - 38972763
Alignment:
Q  92 gtttgagtttttcccgatttcaaaacacgggtacgggacgggtaatagggagataggtacccaccccaaactcgtactcaaactcgtccggaatgtagaa 191  Q
    ||||| ||||||||||||||||||||| ||||| ||||  |||||  || | ||||||||||||||| ||| | ||||||||| | ||   |||| | ||    
T  38973007 gtttgggtttttcccgatttcaaaacatgggtatgggataggtaacgggaatataggtacccaccccgaacccatactcaaacccatctcaaatgcataa 38972908  T
Q  192 aatcaatttattactcattttatataaatagaaaccaaaactctgaatcatttcacccacacagttagagtttcagttttttagatgacatccacttatt 291  Q
    |||||||||||||  | |||||||||||| |||||  |||| || |||||||| |  ||||| |||||||| | | | ||| | ||||||  |||||||     
T  38972907 aatcaatttattaacccttttatataaatcgaaactgaaaccctaaatcatttgattcacactgttagagtctaaatctttcatatgacactcacttatc 38972808  T
Q  292 atagttctctcttttctccttctatatctcacactctcggtctct 336  Q
    ||||||||||||| |||||||  |||| |||||||||| ||||||    
T  38972807 atagttctctcttatctcctttcatatatcacactctctgtctct 38972763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 182 - 329
Target Start/End: Complemental strand, 24207682 - 24207538
Alignment:
Q  182 gaatgtagaaaatcaatttattactcattttatataaatagaaaccaaaactctgaatcatttcacccacacagttagagtttcagttttttagatgaca 281  Q
    ||||||||||||| ||||||||| || ||||||||||||| |||| ||||| || ||| | ||||| |||||   |||||| ||||| ||| ||||||||    
T  24207682 gaatgtagaaaattaatttattaatccttttatataaataaaaactaaaaccctaaataacttcactcacac---tagagtctcagtctttcagatgaca 24207586  T
Q  282 tccacttattatagttctctcttttctccttctatatctcacactctc 329  Q
       |||||| ||||||||||||||||||||||  ||||||||||||||    
T  24207585 ctaacttataatagttctctcttttctccttcattatctcacactctc 24207538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 88 - 254
Target Start/End: Complemental strand, 12457606 - 12457440
Alignment:
Q  88 ttgggtttgagtttttcccgatttcaaaacacgggtacgggacgggtaatagggagataggtacccaccccaaactcgtactcaaactcgtccggaatgt 187  Q
    ||||||||| | ||| | ||||||||||| ||||||| ||||| ||||| |  || |||   || ||| || ||||| ||| ||||| ||||| ||||||    
T  12457606 ttgggtttggggtttcctcgatttcaaaatacgggtatgggacaggtaacatagatataaacactcactccgaactcatacccaaacccgtcccgaatgt 12457507  T
Q  188 agaaaatcaatttattactcattttatataaatagaaaccaaaactctgaatcatttcacccacaca 254  Q
    |||||||||||||||||| | ||| ||||||||||||||| ||| ||| ||||||||||| ||||||    
T  12457506 agaaaatcaatttattacccctttaatataaatagaaacctaaagtctaaatcatttcactcacaca 12457440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 98 - 323
Target Start/End: Original strand, 18451895 - 18452120
Alignment:
Q  98 gtttttcccgatttcaaaacacgggtacgggacgggtaatagggagataggtacccaccccaaactcgtactcaaactcgtccggaatgtagaaaatcaa 197  Q
    ||||| |||||||| |||| || |||||| |||  |||| |  || ||| ||||||||||| ||||| || |||||||||||| || |||||||||||||    
T  18451895 gttttccccgatttgaaaatacaggtacgagacatgtaacacagatataagtacccaccccgaactcataatcaaactcgtcccgattgtagaaaatcaa 18451994  T
Q  198 tttattactcattttatataaatagaaa-ccaaaactctgaatcatttcacccacacagttagagtttcagttttttagatgacatccacttattatagt 296  Q
    |||||||  | |||||||| ||||||||  | || || |  |||||||||| |||||||||| ||| || || ||| |||||| |  ||||||| || ||    
T  18451995 tttattatcccttttatattaatagaaatacgaatct-tagatcatttcactcacacagttaaagtctcggtctttcagatgatagtcacttatcatggt 18452093  T
Q  297 tctctcttttctccttctatatctcac 323  Q
    ||||||||||||||||| ||| |||||    
T  18452094 tctctcttttctccttccataactcac 18452120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 96 - 281
Target Start/End: Complemental strand, 8020696 - 8020511
Alignment:
Q  96 gagtttttcccgatttcaaaacacgggtacgggacgggtaatagggagataggtacccaccccaaactcgtactcaaactcgtccggaatgtagaaaatc 195  Q
    ||||||| |||||||||||||||||||||| | | |||||| ||||| |||||||| || | | ||||| ||| ||||| ||| | ||||||||||||||    
T  8020696 gagttttccccgatttcaaaacacgggtactgaatgggtaacagggatataggtactcatctcgaactcatacgcaaacccgttctgaatgtagaaaatc 8020597  T
Q  196 aatttattactcattttatataaatagaaaccaaaactctgaatcatttcacccacacagttagagtttcagttttttagatgaca 281  Q
    |||||| ||| | |||||||||||   ||||| |||| || ||| ||| ||| || ||||| ||||| ||||| ||| | ||||||    
T  8020596 aatttactaccccttttatataaaggaaaacctaaaccctaaattattccactcaaacagtcagagtctcagtctttcaaatgaca 8020511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 129 - 330
Target Start/End: Original strand, 7350448 - 7350649
Alignment:
Q  129 acgggtaatagggagataggtacccaccccaaactcgtactcaaactcgtccggaatgtagaaaatcaatttattactcattttatataaatagaaacca 228  Q
    ||||||||| |||| ||||| | ||||||| ||| | |||| |||| ||||   |||||||||||| |||||||||    |||||||||||||| || |     
T  7350448 acgggtaatggggatataggcatccaccccgaacccatacttaaacccgtctcaaatgtagaaaattaatttattatcgcttttatataaatagtaatcg 7350547  T
Q  229 aaactctgaatcatttcacccacacagttagagtttcagttttttagatgacatccacttattatagttctctcttttctccttctatatctcacactct 328  Q
    |||| || |||||||| || |||| |||||||||  || | ||| ||| |||   ||||||| ||||||||||||| |||||||| |||||||||| |||    
T  7350548 aaaccctaaatcattttactcacatagttagagtcgcaatctttgagacgacgctcacttatcatagttctctcttatctccttccatatctcacattct 7350647  T
Q  329 cg 330  Q
    ||    
T  7350648 cg 7350649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 113 - 194
Target Start/End: Original strand, 35194014 - 35194095
Alignment:
Q  113 aaaacacgggtacgggacgggtaatagggagataggtacccaccccaaactcgtactcaaactcgtccggaatgtagaaaat 194  Q
    |||||||||||| |||||||||||  || | ||||||||||||||||||||| ||||||||| ||||| |||||||||||||    
T  35194014 aaaacacgggtatgggacgggtaacgggtatataggtacccaccccaaactcatactcaaacccgtcccgaatgtagaaaat 35194095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 17 - 117
Target Start/End: Original strand, 457359 - 457458
Alignment:
Q  17 aaatttatagagcctctctcctccgtccgaatcaatctcactttgacgtgttttttccgttttgactgaatttgggtttgagtttttcccgatttcaaaa 116  Q
    ||||||| ||||||| ||||||||||||||||||| |||| |||||||| ||||||| ||||||  || ||||  |||||||||||||||||||| ||||    
T  457359 aaatttacagagcctttctcctccgtccgaatcaaactcattttgacgtattttttctgttttgtatg-atttaagtttgagtttttcccgattttaaaa 457457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 91 - 221
Target Start/End: Original strand, 32574941 - 32575071
Alignment:
Q  91 ggtttgagtttttcccgatttcaaaacacgggtacgggacgggtaatagggagataggtacccaccccaaactcgtactcaaactcgtccggaatgtaga 190  Q
    |||||| ||||| |||||||||||||||| | ||||||| |||||| | ||| ||| ||||||| ||| ||| |  || ||||| || || |||||||||    
T  32574941 ggtttgggttttccccgatttcaaaacacagatacgggatgggtaacatggatatatgtacccatcccgaacccaaacccaaacccgccccgaatgtaga 32575040  T
Q  191 aaatcaatttattactcattttatataaata 221  Q
    | ||||||||||||| | |||||||||||||    
T  32575041 atatcaatttattaccccttttatataaata 32575071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 182 - 331
Target Start/End: Complemental strand, 35584111 - 35583963
Alignment:
Q  182 gaatgtagaaaatcaatttattactcattttatataaatagaaaccaaaactctgaatcatttcacccacacagttagagtttcagttttttagatgaca 281  Q
    ||||||| |||||||||||||||| | ||||||||||||||||||  |||| || ||||||||  | |||||||| ||||| ||||| ||| ||||| ||    
T  35584111 gaatgtacaaaatcaatttattaccc-ttttatataaatagaaactcaaaccctaaatcattttgctcacacagtcagagtctcagtctttcagatgtca 35584013  T
Q  282 tccacttattatagttctctcttttctccttctatatctcacactctcgg 331  Q
      || |||| |  ||||||| ||||||||||  ||||| |||||||||||    
T  35584012 ctcatttatcactgttctctgttttctcctttcatatcccacactctcgg 35583963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 39 - 254
Target Start/End: Complemental strand, 6810290 - 6810081
Alignment:
Q  39 ccgtccgaatcaatctcactttgacgtgttttttccgttttgactgaatttgggtttgagtttttcccgatttcaaaacacgggtacgggacgggtaata 138  Q
    ||||||||| ||| |||| |||||||  ||||||||| ||||| ||| |||||||||      | |||||||| | ||||||||||||| ||||||||      
T  6810290 ccgtccgaaccaaactcaatttgacggattttttccgctttgaatgagtttgggttt------tccccgattttagaacacgggtacggaacgggtaacg 6810197  T
Q  139 gggagataggtacccaccccaaactcgtactcaaactcgtccggaatgtagaaaatcaatttattactcattttatataaatagaaaccaaaactctgaa 238  Q
     ||| ||| |||| |||||| ||| | ||| ||||| | ||| |||||  ||||||||||||||| | | |||||||| |||||||||| ||||  | ||    
T  6810196 aggatataagtactcaccccgaacccatacccaaacccatcccgaatggtgaaaatcaatttattgccccttttatatcaatagaaacccaaaccttaaa 6810097  T
Q  239 tcatttcacccacaca 254  Q
    | ||||||| ||||||    
T  6810096 tgatttcactcacaca 6810081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 101 - 194
Target Start/End: Original strand, 8453386 - 8453480
Alignment:
Q  101 tttcccgatttcaaaacacgggtacgggacgggtaatagggagataggtacccaccccaaactcgtactc-aaactcgtccggaatgtagaaaat 194  Q
    |||||||||||||||||||||||| |||| |||||| ||  | |||||||| ||||||||| || ||||| ||||||||||  ||||||||||||    
T  8453386 tttcccgatttcaaaacacgggtatgggatgggtaacagatatataggtacacaccccaaagtcatactcaaaactcgtcccaaatgtagaaaat 8453480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 182 - 247
Target Start/End: Original strand, 457466 - 457531
Alignment:
Q  182 gaatgtagaaaatcaatttattactcattttatataaatagaaaccaaaactctgaatcatttcac 247  Q
    ||||||| |||||||||||||||| | |||||||||||||||||||||||  || |||||||||||    
T  457466 gaatgtataaaatcaatttattacaccttttatataaatagaaaccaaaatcctaaatcatttcac 457531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 58 - 194
Target Start/End: Complemental strand, 35311938 - 35311805
Alignment:
Q  58 tttgacgtgttttttccgttttgactgaatttgggtttgagtttttcccgatttcaaaacacgggtacgggacgggtaatagggagataggtacccaccc 157  Q
    |||||||  ||||||||||||||||||| ||||||| ||  | |   |||||||||||||||||||| ||||||||||| ||  | |||||||||||| |    
T  35311938 tttgacggattttttccgttttgactgagtttgggtatggatat---ccgatttcaaaacacgggtatgggacgggtaacagatatataggtacccactc 35311842  T
Q  158 caaactcgtactcaaactcgtccggaatgtagaaaat 194  Q
    | ||| | |||||| || |||||  |||||| |||||    
T  35311841 cgaacccatactcatacccgtcccaaatgtaaaaaat 35311805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 89 - 162
Target Start/End: Complemental strand, 4583207 - 4583134
Alignment:
Q  89 tgggtttgagtttttcccgatttcaaaacacgggtacgggacgggtaatagggagataggtacccaccccaaac 162  Q
    ||||| || ||||| ||||||||||||||||||||| |||||||||||  || | |||||| ||||||||||||    
T  4583207 tgggtatgggttttccccgatttcaaaacacgggtatgggacgggtaacgggtatataggttcccaccccaaac 4583134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 89 - 202
Target Start/End: Original strand, 38006470 - 38006583
Alignment:
Q  89 tgggtttgagtttttcccgatttcaaaacacgggtacgggacgggtaatagggagataggtacccaccccaaactcgtactcaaactcgtccggaatgta 188  Q
    |||||||| ||||| ||| ||||||||| ||||||| |||||| |||| ||  | ||||||||||||||| ||| | ||| ||||  ||||| ||||||     
T  38006470 tgggtttgggttttccccaatttcaaaatacgggtatgggacgcgtaacagatatataggtacccaccccgaacccatacccaaatccgtcccgaatgtt 38006569  T
Q  189 gaaaatcaatttat 202  Q
    |||||| |||||||    
T  38006570 gaaaattaatttat 38006583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 99 - 163
Target Start/End: Original strand, 33728012 - 33728076
Alignment:
Q  99 tttttcccgatttcaaaacacgggtacgggacgggtaatagggagataggtacccaccccaaact 163  Q
    |||| |||||| |||||||||||||| |||||||||||  || | ||||||||||||||||||||    
T  33728012 ttttccccgatctcaaaacacgggtatgggacgggtaacgggtatataggtacccaccccaaact 33728076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 89 - 156
Target Start/End: Original strand, 12866552 - 12866619
Alignment:
Q  89 tgggtttgagtttttcccgatttcaaaacacgggtacgggacgggtaatagggagataggtacccacc 156  Q
    ||||| ||||||||  |||||||||||||| ||||| ||||||||||| ||| | |||||||||||||    
T  12866552 tgggtatgagttttctccgatttcaaaacatgggtatgggacgggtaacaggtatataggtacccacc 12866619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 58 - 194
Target Start/End: Complemental strand, 18207143 - 18207002
Alignment:
Q  58 tttgacgtgttttttccgttttgactgaatttggg------tttgagtttttcccgatttcaaaacacgggtacgggacgggtaatagggagataggtac 151  Q
    |||||||||||||| ||||||||||||  ||||||      |||| ||||| | |||||||||||| || ||| ||||| ||||| ||| | ||||||||    
T  18207143 tttgacgtgtttttcccgttttgactgggtttgggcatgagtttgggttttcctcgatttcaaaactcgtgtatgggacaggtaacaggtatataggtac 18207044  T
Q  152 ccaccccaaactcgtactcaaactcgtccggaatgtagaaaat 194  Q
    ||| ||| ||| | || |||||| ||||| |||||||||||||    
T  18207043 cca-cccgaacccatattcaaacccgtcccgaatgtagaaaat 18207002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 99 - 158
Target Start/End: Original strand, 28569032 - 28569091
Alignment:
Q  99 tttttcccgatttcaaaacacgggtacgggacgggtaatagggagataggtacccacccc 158  Q
    |||| |||||||||||||  ||||||||||||||||||  |||| |||||||||||||||    
T  28569032 ttttccccgatttcaaaatgcgggtacgggacgggtaacggggatataggtacccacccc 28569091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 89 - 194
Target Start/End: Complemental strand, 4920914 - 4920809
Alignment:
Q  89 tgggtttgagtttttcccgatttcaaaacacgggtacgggacgggtaatagggagataggtacccaccccaaactcgtactcaaactcgtccggaatgta 188  Q
    ||||| || ||||| |||||| |||||||||||||| |||||||||||  || | ||||||| ||||||| ||| | ||| ||||| |||||  ||||||    
T  4920914 tgggtatgggttttccccgatctcaaaacacgggtatgggacgggtaacgggtatataggtatccaccccgaacccatacccaaacccgtcccaaatgta 4920815  T
Q  189 gaaaat 194  Q
     |||||    
T  4920814 aaaaat 4920809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 89 - 194
Target Start/End: Original strand, 5908689 - 5908794
Alignment:
Q  89 tgggtttgagtttttcccgatttcaaaacacgggtacgggacgggtaatagggagataggtacccaccccaaactcgtactcaaactcgtccggaatgta 188  Q
    ||||| |||||||| |||||| || ||||||||||| |||||||||||  || | ||| |||| |||||||||| | ||| ||||| |||||  ||||||    
T  5908689 tgggtatgagttttccccgatctcgaaacacgggtatgggacgggtaacgggtatatatgtacacaccccaaacccatacccaaacccgtcccaaatgta 5908788  T
Q  189 gaaaat 194  Q
     |||||    
T  5908789 aaaaat 5908794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 89 - 162
Target Start/End: Original strand, 29245952 - 29246025
Alignment:
Q  89 tgggtttgagtttttcccgatttcaaaacacgggtacgggacgggtaatagggagataggtacccaccccaaac 162  Q
    ||||| ||||||||  |||||||||||||||||||| ||||||  ||| | | | |||||||||||||||||||    
T  29245952 tgggtatgagttttctccgatttcaaaacacgggtatgggacgaataacatgtatataggtacccaccccaaac 29246025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 105 - 157
Target Start/End: Complemental strand, 15890278 - 15890226
Alignment:
Q  105 ccgatttcaaaacacgggtacgggacgggtaatagggagataggtacccaccc 157  Q
    |||||||||||||||||||| |||||||||||  || | ||||||||||||||    
T  15890278 ccgatttcaaaacacgggtatgggacgggtaacgggtatataggtacccaccc 15890226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 170 - 310
Target Start/End: Original strand, 16366529 - 16366671
Alignment:
Q  170 caaactcgtccggaatgtagaaaatcaatttattact-cattttatataaatagaaac-caaaactctgaatcatttcacccacacagttagagtttcag 267  Q
    ||||||||||| ||||||||||||| | ||||||||| | ||||||||||| |||||| ||||||  | |||||||||   |||||| | ||| | ||||    
T  16366529 caaactcgtcccgaatgtagaaaattattttattactcccttttatataaaaagaaactcaaaaccataaatcatttccgtcacacaatcagaatctcag 16366628  T
Q  268 ttttttagatgacatccacttattatagttctctcttttctcc 310  Q
      | | ||||||||  ||||||| | |||||||||| ||||||    
T  16366629 cctatcagatgacactcacttatcagagttctctctattctcc 16366671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 89 - 158
Target Start/End: Original strand, 23044992 - 23045061
Alignment:
Q  89 tgggtttgagtttttcccgatttcaaaacacgggtacgggacgggtaatagggagataggtacccacccc 158  Q
    |||||||  ||||| ||||||||||||| |||||||||||| ||||||  | || ||| |||||||||||    
T  23044992 tgggtttaggttttccccgatttcaaaatacgggtacgggatgggtaacggagatatatgtacccacccc 23045061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 89 - 129
Target Start/End: Original strand, 2412727 - 2412767
Alignment:
Q  89 tgggtttgagtttttcccgatttcaaaacacgggtacggga 129  Q
    ||||||||| |||||||| ||||||||||||||||| ||||    
T  2412727 tgggtttgaatttttcccaatttcaaaacacgggtatggga 2412767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 99 - 155
Target Start/End: Complemental strand, 12251048 - 12250992
Alignment:
Q  99 tttttcccgatttcaaaacacgggtacgggacgggtaatagggagataggtacccac 155  Q
    |||||| ||||||||||| |||||||| |||||||||| || || ||| ||||||||    
T  12251048 tttttcacgatttcaaaatacgggtaccggacgggtaacagagatatatgtacccac 12250992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 92 - 192
Target Start/End: Original strand, 12773825 - 12773925
Alignment:
Q  92 gtttgagtttttcccgatttcaaaacacgggtacgggacgggtaatagggagataggtacccaccccaaactcgtactcaaactcgtccggaatgtagaa 191  Q
    ||||| |||||  |||||||||||| ||||||||||||||| |||  | || ||| ||||||||| | ||| | ||||||||| |  || ||||||||||    
T  12773825 gtttgggttttctccgatttcaaaatacgggtacgggacggataacggagatatatgtacccacctcgaacccatactcaaaccctacccgaatgtagaa 12773924  T
Q  192 a 192  Q
    |    
T  12773925 a 12773925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 82; Significance: 1e-38; HSPs: 39)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 92 - 336
Target Start/End: Complemental strand, 27252649 - 27252409
Alignment:
Q  92 gtttgagtttttcccgatttcaaaacacgggtacgggacgggtaatagggagataggtacccaccccaaactcgtactcaaactcgtccggaatgtagaa 191  Q
    |||||||||||  || |||||||| || ||||||||||||| ||| || || |||||||||||     ||| | ||| |||||||  || ||||||||||    
T  27252649 gtttgagttttctccaatttcaaa-catgggtacgggacggataacagtgatataggtacccattg--aacccatacccaaactcaccctgaatgtagaa 27252553  T
Q  192 aatcaatttattactcattttatataaatagaaaccaaaactctgaatcatttcacccacacagttagagtttcagttttttagatgacatccacttatt 291  Q
      |||||||||||| |||||||||||||||||||||||||   | ||||||||||| |||||||||||||| ||||| ||| ||||||||  |||||||     
T  27252552 tttcaatttattacccattttatataaatagaaaccaaaatcataaatcatttcactcacacagttagagtatcagtctttcagatgacactcacttatc 27252453  T
Q  292 atagttctctcttttctccttctatatctcacactctcggtctct 336  Q
     |||||||||| |||||||||| ||||||||||||||||| ||||    
T  27252452 ttagttctctc-tttctccttccatatctcacactctcggcctct 27252409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 107 - 309
Target Start/End: Original strand, 30904834 - 30905035
Alignment:
Q  107 gatttcaaaacacgggtacgggacgggtaatagggagataggtacccaccccaaactcgtactcaaactcgtccggaatgtagaaaatcaatttattact 206  Q
    |||||||||||||||||||||||||||||   |||| ||||||||||||||| ||| | ||| ||||  ||||  |||||||| ||||||||||| |||     
T  30904834 gatttcaaaacacgggtacgggacgggtacg-gggatataggtacccaccccgaacccatacccaaatccgtctcgaatgtaggaaatcaatttactacc 30904932  T
Q  207 cattttatataaatagaaaccaaaactctgaatcatttcacccacacagttagagtttcagttttttagatgacatccacttattatagttctctctttt 306  Q
    | ||||||||||||||||||| |||| || ||||||||||| || | ||| ||||||  ||| ||| | ||||||  ||||||||| |  ||||||||||    
T  30904933 ccttttatataaatagaaacccaaacccttaatcatttcactcatatagtcagagttgtagtctttcatatgacactcacttattacatgtctctctttt 30905032  T
Q  307 ctc 309  Q
    |||    
T  30905033 ctc 30905035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 92 - 226
Target Start/End: Complemental strand, 4553275 - 4553142
Alignment:
Q  92 gtttgagtttttcccgatttcaaaacacgggtacgggacgggtaatagggagataggtacccaccccaaactcgtactcaaactcgtccggaatgtagaa 191  Q
    ||||||||||||||||||||||||||| |||| ||| |||||||||||||| |||  ||| |||||| ||| | ||||||||| ||||  ||||||| ||    
T  4553275 gtttgagtttttcccgatttcaaaacatgggtgcggaacgggtaatagggatataaatacacaccccgaacccatactcaaacccgtctcgaatgtaaaa 4553176  T
Q  192 aatcaatttattactcattttatataaatagaaac 226  Q
    ||||||||||||| |  ||||||||||||| ||||    
T  4553175 aatcaatttatta-tttttttatataaataaaaac 4553142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 168 - 329
Target Start/End: Original strand, 37032177 - 37032336
Alignment:
Q  168 ctcaaactcgtccggaatgtagaaaatcaatttattactcattttatataaatagaaaccaaaactctgaatcatttcacccacacagttagagtttcag 267  Q
    ||||||| | ||| ||||||||||||| |||||||||| ||||||||||||||| ||||  |||| || ||||||||||| || ||| | ||||| || |    
T  37032177 ctcaaacccatcctgaatgtagaaaattaatttattacccattttatataaataaaaactcaaaccctaaatcatttcactcatacaatcagagtctcgg 37032276  T
Q  268 ttttttagatgacatccacttattatagttctctcttttctccttctatatctcacactctc 329  Q
    | ||| ||||||||  || |||| |||||||| ||||||||||||| ||||  |||||||||    
T  37032277 tctttcagatgaca--caattatcatagttctttcttttctccttcaatattccacactctc 37032336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 88 - 336
Target Start/End: Complemental strand, 27937827 - 27937572
Alignment:
Q  88 ttgggtttgagtttttcccgatttcaaaacacgggtacgggacgggtaatagggagataggtacccaccccaaactcgtactcaaactcgtccggaatgt 187  Q
    ||||||||||||||| |  ||||| |||||| | |||  |||| ||||| ||||| | |||||| |||| | ||||| ||| ||||| |  || ||||||    
T  27937827 ttgggtttgagttttccttgattttaaaacatgtgtataggacaggtaacagggatagaggtacacaccacgaactcatacccaaac-ctacctgaatgt 27937729  T
Q  188 agaaaatcaatttattactcattttatataaatagaaaccaaaactctgaatcatttcacccacacagttagag--------tttcagttttttagatga 279  Q
    || |||| ||||||||||   ||||||||||||||||||| |||| || ||||||||||| |||||  || |||        ||| | | ||| | ||||    
T  27937728 aggaaattaatttattacagcttttatataaatagaaacctaaaccctaaatcatttcactcacacgatttgagtctcaatctttgactctttcaaatga 27937629  T
Q  280 catccacttattatagttctctcttttctccttctatatctcacactctcggtctct 336  Q
    ||  |||||||||||||||| ||||||||| ||| ||||||||||||||||||||||    
T  27937628 cactcacttattatagttctttcttttctctttccatatctcacactctcggtctct 27937572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 182 - 336
Target Start/End: Complemental strand, 26207279 - 26207128
Alignment:
Q  182 gaatgtagaaaatcaatttattac-tcattttatataaatagaaaccaaaactctgaatcatttcacccacacagttagagtttcagttttttagatgac 280  Q
    ||||||||| |||||||||||||| |  |||||||||||| |||||| |||| || |||||||||||    ||||||||||| ||  | |||||||||||    
T  26207279 gaatgtagataatcaatttattacctttttttatataaattgaaacccaaaccctaaatcatttcac----acagttagagtctccatcttttagatgac 26207184  T
Q  281 atccacttattatagttctctcttttctccttctatatctcacactctcggtctct 336  Q
    |  ||||| | |||||||||  ||||||||| | ||||||||||||||||| ||||    
T  26207183 actcacttgtcatagttctcatttttctcctcccatatctcacactctcggcctct 26207128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 73 - 193
Target Start/End: Original strand, 23546926 - 23547046
Alignment:
Q  73 ccgttttgactgaatttgggtttgagtttttcccgatttcaaaacacgggtacgggacgggtaatagggagataggtacccaccccaaactcgtactcaa 172  Q
    ||||||||||||  ||||||| || ||||| |||||| || ||||||||||| |||||||||||  || | ||||||||||||||| ||| | ||| |||    
T  23546926 ccgttttgactgggtttgggtatgggttttccccgatctcgaaacacgggtatgggacgggtaacgggtatataggtacccaccccgaacccatacccaa 23547025  T
Q  173 actcgtccggaatgtagaaaa 193  Q
    ||||||||  |||||| ||||    
T  23547026 actcgtcccaaatgtaaaaaa 23547046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 89 - 179
Target Start/End: Original strand, 39655273 - 39655363
Alignment:
Q  89 tgggtttgagtttttcccgatttcaaaacacgggtacgggacgggtaatagggagataggtacccaccccaaactcgtactcaaactcgtc 179  Q
    ||||| || ||||| |||||| |||||||||||||| ||||||||||| ||| | ||||||||||||||||||| | ||| ||||| ||||    
T  39655273 tgggtatgggttttccccgatctcaaaacacgggtatgggacgggtaacaggtatataggtacccaccccaaacccatacccaaacccgtc 39655363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 92 - 218
Target Start/End: Complemental strand, 42243472 - 42243346
Alignment:
Q  92 gtttgagtttttcccgatttcaaaacacgggtacgggacgggtaatagggagataggtacccaccccaaactcgtactcaaactcgtccggaatgtagaa 191  Q
    ||||| ||||||||||||||||| ||||||||| | || ||||||   ||| |||  || |||||||||| || ||| ||||| | |||  |||||||||    
T  42243472 gtttgggtttttcccgatttcaatacacgggtatgagatgggtaacgaggatatatttatccaccccaaattcatacccaaacccatcctaaatgtagaa 42243373  T
Q  192 aatcaatttattactcattttatataa 218  Q
    |||||||||||||| | ||||||||||    
T  42243372 aatcaatttattaccccttttatataa 42243346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 87 - 193
Target Start/End: Original strand, 44953433 - 44953539
Alignment:
Q  87 tttgggtttgagtttttcccgatttcaaaacacgggtacgggacgggtaatagggagataggtacccaccccaaactcgtactcaaactcgtccggaatg 186  Q
    ||||||| || ||||| |||||| |||||||||||||| |||||||||||  || | |||||||| |||||| ||||| ||||||||| |||||  ||||    
T  44953433 tttgggtatgggttttccccgatctcaaaacacgggtatgggacgggtaacgggtatataggtactcaccccgaactcatactcaaacccgtcccaaatg 44953532  T
Q  187 tagaaaa 193  Q
    || ||||    
T  44953533 taaaaaa 44953539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 89 - 194
Target Start/End: Complemental strand, 53631992 - 53631887
Alignment:
Q  89 tgggtttgagtttttcccgatttcaaaacacgggtacgggacgggtaatagggagataggtacccaccccaaactcgtactcaaactcgtccggaatgta 188  Q
    |||||||||||||| ||  |||| |||||||| ||| | |||||||||  || | ||||||||||||||| ||| | ||||||||||||||| |||| ||    
T  53631992 tgggtttgagttttcccaaattttaaaacacgtgtatgagacgggtaacgggtatataggtacccaccccgaacccatactcaaactcgtcccgaatcta 53631893  T
Q  189 gaaaat 194  Q
    ||||||    
T  53631892 gaaaat 53631887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 93 - 325
Target Start/End: Original strand, 3385860 - 3386092
Alignment:
Q  93 tttgagtttttcccgatttcaaaacacgggtacgggacgggtaatagggagataggtacccaccccaaactcgtactcaaactcgtccggaatgtagaaa 192  Q
    ||||| ||||| || ||||||||||||||||||||||| |||||   ||| ||||||| ||||| | ||  | |||  |||| ||| |  |||||| |||    
T  3385860 tttgaatttttacccatttcaaaacacgggtacgggacaggtaacgaggatataggtagccaccacgaatccataccaaaacccgtacctaatgtaaaaa 3385959  T
Q  193 atcaatttattactcattttatataaatagaaaccaaaactctgaatcatttcacccacacagttagagtttcagttttttagatgacatccacttatta 292  Q
    |||| |||| ||  | |||| |||||||| ||| | |||  || |||||||||||  ||| ||||| ||| || || |||||| |||||  | ||||| |    
T  3385960 atcattttagtaacccttttctataaataaaaatcgaaatcctaaatcatttcacttacatagttaaagtctcggtcttttagttgacactctcttatca 3386059  T
Q  293 tagttctctcttttctccttctatatctcacac 325  Q
     ||||||||||| |||||||| |||||||||||    
T  3386060 aagttctctcttatctccttccatatctcacac 3386092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 89 - 193
Target Start/End: Original strand, 4016044 - 4016148
Alignment:
Q  89 tgggtttgagtttttcccgatttcaaaacacgggtacgggacgggtaatagggagataggtacccaccccaaactcgtactcaaactcgtccggaatgta 188  Q
    |||||||| ||||| ||||||||||||||| ||||| ||||||| |||  || | |||||||||||| || ||| | ||| ||||||||||| ||||| |    
T  4016044 tgggtttgggttttccccgatttcaaaacatgggtatgggacggataacgggtatataggtacccactccgaacccatacccaaactcgtcccgaatgca 4016143  T
Q  189 gaaaa 193  Q
    |||||    
T  4016144 gaaaa 4016148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 89 - 325
Target Start/End: Original strand, 3414537 - 3414769
Alignment:
Q  89 tgggtttgagtttttcccgatttcaaaacacgggtacgggacgggtaatagggagataggtacccaccccaaactcgtactcaaactcgtccggaatgta 188  Q
    |||||||||||||||||||||||  ||||||| ||||||||| |||||  |||    | |||| || ||| ||  | ||||||||| ||| |  ||||||    
T  3414537 tgggtttgagtttttcccgattttcaaacacgagtacgggacaggtaacgggg----atgtactcatcccgaatccatactcaaacccgtacctaatgta 3414632  T
Q  189 gaaaatcaatttattactcattttatataaatagaaaccaaaactctgaatcatttcacccacacagttagagtttcagttttttagatgacatccactt 288  Q
    |||||||| |||| ||| | |||| |||||||| ||| | |||| || ||||||||||| |||| ||| | ||| ||  | |||||| |||||  | |||    
T  3414633 gaaaatcattttaataccccttttctataaataaaaatcgaaaccctaaatcatttcactcacatagtcaaagtctcgttcttttagttgacactctctt 3414732  T
Q  289 attatagttctctcttttctccttctatatctcacac 325  Q
     | | |||||| |||| |||||||| |||||||||||    
T  3414733 ctcaaagttctatcttatctccttccatatctcacac 3414769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 92 - 162
Target Start/End: Complemental strand, 19111819 - 19111749
Alignment:
Q  92 gtttgagtttttcccgatttcaaaacacgggtacgggacgggtaatagggagataggtacccaccccaaac 162  Q
    |||||||||||||||||||||||||||||||||||||| || |||  || | ||| |||||||||| ||||    
T  19111819 gtttgagtttttcccgatttcaaaacacgggtacgggatggataacgggtatataagtacccaccctaaac 19111749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 92 - 158
Target Start/End: Complemental strand, 34119741 - 34119675
Alignment:
Q  92 gtttgagtttttcccgatttcaaaacacgggtacgggacgggtaatagggagataggtacccacccc 158  Q
    |||||||||||||||||||| |||||||||||| | ||||| ||| ||| | |||||||||||||||    
T  34119741 gtttgagtttttcccgattttaaaacacgggtatgagacggataacaggtatataggtacccacccc 34119675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 100 - 192
Target Start/End: Original strand, 40796148 - 40796240
Alignment:
Q  100 ttttcccgatttcaaaacacgggtacgggacgggtaatagggagataggtacccaccccaaactcgtactcaaactcgtccggaatgtagaaa 192  Q
    |||| |||||||||||| ||||||||||||||||||||  ||| | | |||||||||||||| || ||| |||||    ||||||||||||||    
T  40796148 tttttccgatttcaaaatacgggtacgggacgggtaatgaggatacatgtacccaccccaaagtcatacccaaaccttaccggaatgtagaaa 40796240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 126 - 328
Target Start/End: Original strand, 772831 - 773032
Alignment:
Q  126 gggacgggtaatagggagataggtacccaccccaaactcgtactcaaactcgtccggaatgtagaaaatcaatttattactcattttatataaatagaaa 225  Q
    ||||| ||||| ||||| |||  |||||||||| ||||| | | ||||   ||||  ||| ||||||||||||||||||| | |||| ||||||||||||    
T  772831 gggacaggtaacagggatatatctacccaccccgaactcatgcccaaatatgtcccaaatatagaaaatcaatttattaccc-ttttgtataaatagaaa 772929  T
Q  226 ccaaaactctgaatcatttcacccacacagttagagtttcagttttttagatgacatccacttattatagttctctcttttctccttctatatctcacac 325  Q
    |  ||||  ||||||||||||| |||||| |   ||| |||   || |||||||||  | ||| | ||| |||||||||||||||||  || ||||||||    
T  772930 ctcaaaccttgaatcatttcactcacacaatctaagtctcacacttctagatgacactcgcttgtcatatttctctcttttctcctttcatgtctcacac 773029  T
Q  326 tct 328  Q
    |||    
T  773030 tct 773032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 89 - 151
Target Start/End: Complemental strand, 49025768 - 49025706
Alignment:
Q  89 tgggtttgagtttttcccgatttcaaaacacgggtacgggacgggtaatagggagataggtac 151  Q
    |||||||| ||||| |||||| |||||||||||||| ||||||||||| ||| | ||||||||    
T  49025768 tgggtttgggttttccccgatctcaaaacacgggtatgggacgggtaacaggtatataggtac 49025706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 89 - 142
Target Start/End: Complemental strand, 2490393 - 2490340
Alignment:
Q  89 tgggtttgagtttttcccgatttcaaaacacgggtacgggacgggtaataggga 142  Q
    |||||||||||||| ||||||||||||| |||||||| | ||||||||| ||||    
T  2490393 tgggtttgagttttccccgatttcaaaatacgggtacagaacgggtaatgggga 2490340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 66 - 136
Target Start/End: Original strand, 30616252 - 30616328
Alignment:
Q  66 gttttttccgttttgactgaatttg------ggtttgagtttttcccgatttcaaaacacgggtacgggacgggtaa 136  Q
    |||||| ||||||||||||||||||      |||||| ||||| |||||||||||||||||| || |||||||||||    
T  30616252 gtttttcccgttttgactgaatttgagtatgggtttgggttttccccgatttcaaaacacggatatgggacgggtaa 30616328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 89 - 194
Target Start/End: Complemental strand, 44172714 - 44172609
Alignment:
Q  89 tgggtttgagtttttcccgatttcaaaacacgggtacgggacgggtaatagggagataggtacccaccccaaactcgtactcaaactcgtccggaatgta 188  Q
    ||||| || ||||| |||||| |||||||||||||| |||||||||||  || | ||| ||||||||||| ||| | ||| ||||| |||||  ||||||    
T  44172714 tgggtatgggttttccccgatctcaaaacacgggtatgggacgggtaacgggtatataagtacccaccccgaacccatacccaaacccgtcccaaatgta 44172615  T
Q  189 gaaaat 194  Q
     |||||    
T  44172614 aaaaat 44172609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 89 - 194
Target Start/End: Complemental strand, 44179414 - 44179309
Alignment:
Q  89 tgggtttgagtttttcccgatttcaaaacacgggtacgggacgggtaatagggagataggtacccaccccaaactcgtactcaaactcgtccggaatgta 188  Q
    ||||| || ||||| |||||| |||||||||||||| |||||||||||  || | ||| ||||||||||| ||| | ||| ||||| |||||  ||||||    
T  44179414 tgggtatgggttttccccgatctcaaaacacgggtatgggacgggtaacgggtatataagtacccaccccgaacccatacccaaacccgtcccaaatgta 44179315  T
Q  189 gaaaat 194  Q
     |||||    
T  44179314 aaaaat 44179309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 89 - 154
Target Start/End: Original strand, 48390817 - 48390882
Alignment:
Q  89 tgggtttgagtttttcccgatttcaaaacacgggtacgggacgggtaatagggagataggtaccca 154  Q
    ||||| || ||||| ||||||||||||||||||||| |||||||||||  || | |||||||||||    
T  48390817 tgggtatgggttttccccgatttcaaaacacgggtatgggacgggtaacgggaatataggtaccca 48390882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 89 - 194
Target Start/End: Complemental strand, 49580152 - 49580047
Alignment:
Q  89 tgggtttgagtttttcccgatttcaaaacacgggtacgggacgggtaatagggagataggtacccaccccaaactcgtactcaaactcgtccggaatgta 188  Q
    ||||| || ||||| |||||| |||||||||||||| |||||||||||   | | ||||||||||||| | ||| | ||||||||| |||||  ||||||    
T  49580152 tgggtatgggttttccccgatctcaaaacacgggtatgggacgggtaacgagtatataggtacccacctcgaacccatactcaaacccgtcccaaatgta 49580053  T
Q  189 gaaaat 194  Q
     |||||    
T  49580052 aaaaat 49580047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 89 - 158
Target Start/End: Complemental strand, 52198243 - 52198174
Alignment:
Q  89 tgggtttgagtttttcccgatttcaaaacacgggtacgggacgggtaatagggagataggtacccacccc 158  Q
    ||||| || |||||||||||| ||||||||| |||| |||||||||||  || | |||||||||||||||    
T  52198243 tgggtatgggtttttcccgatctcaaaacacaggtatgggacgggtaacgggtatataggtacccacccc 52198174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 89 - 180
Target Start/End: Complemental strand, 29284424 - 29284333
Alignment:
Q  89 tgggtttgagtttttcccgatttcaaaacacgggtacgggacgggtaatagggagataggtacccaccccaaactcgtactcaaactcgtcc 180  Q
    ||||| || |||||||||||| || ||||||||||| |||||||||||  || | ||||||||||| ||| ||| | ||| ||||| |||||    
T  29284424 tgggtatgggtttttcccgatctcgaaacacgggtatgggacgggtaacgggtatataggtacccagcccgaacccatacccaaacccgtcc 29284333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 100 - 171
Target Start/End: Complemental strand, 29842385 - 29842314
Alignment:
Q  100 ttttcccgatttcaaaacacgggtacgggacgggtaatagggagataggtacccaccccaaactcgtactca 171  Q
    |||||||||||| |||||||||||| ||||| |||||  || | ||||||||||||||| ||| | ||||||    
T  29842385 ttttcccgattttaaaacacgggtatgggactggtaacgggaatataggtacccaccccgaacccatactca 29842314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 183 - 246
Target Start/End: Complemental strand, 40890340 - 40890278
Alignment:
Q  183 aatgtagaaaatcaatttattactcattttatataaatagaaaccaaaactctgaatcatttca 246  Q
    |||||||||||||||||||||| || || |||||||||||||||  |||||||  |||||||||    
T  40890340 aatgtagaaaatcaatttatta-tccttctatataaatagaaactcaaactctagatcatttca 40890278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 89 - 180
Target Start/End: Complemental strand, 44252835 - 44252744
Alignment:
Q  89 tgggtttgagtttttcccgatttcaaaacacgggtacgggacgggtaatagggagataggtacccaccccaaactcgtactcaaactcgtcc 180  Q
    ||||| || ||||| |||||| || ||||||||||| |||||| |||| ||| | ||||||||||||||| ||| | ||| ||||| |||||    
T  44252835 tgggtatgggttttccccgatctcgaaacacgggtatgggacgtgtaacaggtatataggtacccaccccgaacccatacccaaacccgtcc 44252744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 58 - 124
Target Start/End: Complemental strand, 831127 - 831061
Alignment:
Q  58 tttgacgtgttttttccgttttgactgaatttgggtttgagtttttcccgatttcaaaacacgggta 124  Q
    ||||||| |||||  ||||||||||||  ||||||| || || ||||||| ||||||||||||||||    
T  831127 tttgacgggttttccccgttttgactgggtttgggtatgggtatttcccgttttcaaaacacgggta 831061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 104 - 194
Target Start/End: Complemental strand, 42758447 - 42758357
Alignment:
Q  104 cccgatttcaaaacacgggtacgggacgggtaatagggagataggtacccaccccaaactcgtactcaaactcgtccggaatgtagaaaat 194  Q
    |||||||||||||||| |||| ||||||||||| ||| | |||||||  |||||| ||| | ||| ||||| ||||| ||| | |||||||    
T  42758447 cccgatttcaaaacacaggtatgggacgggtaacaggtatataggtatgcaccccgaacccatacccaaacccgtcccgaacgaagaaaat 42758357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 92 - 158
Target Start/End: Complemental strand, 54317229 - 54317163
Alignment:
Q  92 gtttgagtttttcccgatttcaaaacacgggtacgggacgggtaatagggagataggtacccacccc 158  Q
    ||||||||||| ||||||||||||||||  |||  ||||||||||  || | |||||||||||||||    
T  54317229 gtttgagttttccccgatttcaaaacacaagtataggacgggtaacgggtatataggtacccacccc 54317163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 89 - 158
Target Start/End: Original strand, 4557305 - 4557374
Alignment:
Q  89 tgggtttgagtttttcccgatttcaaaacacgggtacgggacgggtaatagggagataggtacccacccc 158  Q
    |||||||| ||||| |||| |||||||||| ||||| |||||||||||   | | |||||||||||||||    
T  4557305 tgggtttgggttttccccgttttcaaaacatgggtatgggacgggtaacgagtatataggtacccacccc 4557374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 89 - 194
Target Start/End: Original strand, 22535841 - 22535946
Alignment:
Q  89 tgggtttgagtttttcccgatttcaaaacacgggtacgggacgggtaatagggagataggtacccaccccaaactcgtactcaaactcgtccggaatgta 188  Q
    ||||| |||||||| ||| |||||||||||||| || |||||||||||  || | | ||| ||||||||| ||| | ||| || ||||||||  ||||||    
T  22535841 tgggtatgagttttccccaatttcaaaacacggatatgggacgggtaacgggtatacaggcacccaccccgaacccatacacatactcgtcctaaatgta 22535940  T
Q  189 gaaaat 194  Q
     |||||    
T  22535941 aaaaat 22535946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 95 - 136
Target Start/End: Complemental strand, 43582659 - 43582618
Alignment:
Q  95 tgagtttttcccgatttcaaaacacgggtacgggacgggtaa 136  Q
    |||||||| ||||||||||||||||||||| | |||||||||    
T  43582659 tgagttttccccgatttcaaaacacgggtatgagacgggtaa 43582618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 89 - 158
Target Start/End: Complemental strand, 52572697 - 52572628
Alignment:
Q  89 tgggtttgagtttttcccgatttcaaaacacgggtacgggacgggtaatagggagataggtacccacccc 158  Q
    ||||| |||||||| | |||| |||||||||||||| |||||||||||  || | ||||| |||||||||    
T  52572697 tgggtatgagttttcctcgatctcaaaacacgggtatgggacgggtaacgggtatatagggacccacccc 52572628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 92 - 136
Target Start/End: Original strand, 35687494 - 35687538
Alignment:
Q  92 gtttgagtttttcccgatttcaaaacacgggtacgggacgggtaa 136  Q
    ||||||||||| |||||||||| || ||||||||| |||||||||    
T  35687494 gtttgagttttccccgatttcataatacgggtacgagacgggtaa 35687538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 287 - 327
Target Start/End: Complemental strand, 40890254 - 40890214
Alignment:
Q  287 ttattatagttctctcttttctccttctatatctcacactc 327  Q
    |||| |||||||||||||||||||||| || ||||||||||    
T  40890254 ttatcatagttctctcttttctccttccatctctcacactc 40890214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 80; Significance: 2e-37; HSPs: 39)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 93 - 324
Target Start/End: Complemental strand, 9402672 - 9402442
Alignment:
Q  93 tttgagtttttcccgatttcaaaacacgggtacgggacgggtaatagggagataggtacccaccccaaactcgtactcaaactcgtccggaatgtagaaa 192  Q
    |||| ||||| ||||||||||||||| |||||| |||||||||| | ||| ||||||  |||||| || | | |||||||||  |||  |||||||||||    
T  9402672 tttgggttttccccgatttcaaaacatgggtacaggacgggtaacatggatataggtgtccacccgaacc-catactcaaacctgtctcgaatgtagaaa 9402574  T
Q  193 atcaatttattactcattttatataaatagaaaccaaaactctgaatcatttcacccacacagttagagtttcagttttttagatgacatccacttatta 292  Q
    ||||||||| ||| |  |||||||||||||||||| |||| || ||||||||||| |||||||| ||||| |  || ||| | || |||  ||||||| |    
T  9402573 atcaatttagtaccccatttatataaatagaaacccaaaccctaaatcatttcactcacacagtcagagtctaggtctttcatatcacactcacttatca 9402474  T
Q  293 tagttctctcttttctccttctatatctcaca 324  Q
    ||||||||||||||||||||| ||||||||||    
T  9402473 tagttctctcttttctccttccatatctcaca 9402442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 98 - 336
Target Start/End: Original strand, 34346014 - 34346261
Alignment:
Q  98 gtttttcccgatttcaaaacacgggtacgggacgggtaatagggagataggtacccaccccaaactcgtactcaaactcgtccggaatgtagaaaatcaa 197  Q
    |||||||||||||| |||| |||||| |||  || ||||  |||| ||||||||||||||| ||    ||| ||||  ||| | ||||||||||||| ||    
T  34346014 gtttttcccgattttaaaatacgggttcggagcgagtaacggggatataggtacccaccccgaatctatacccaaatccgttccgaatgtagaaaattaa 34346113  T
Q  198 tttattactcattttat---------ataaatagaaaccaaaactctgaatcatttcacccacacagttagagtttcagttttttagatgacatccactt 288  Q
    |||||||||| ||||||         ||||||||||||| |||| || ||||||||||| |||||||| ||||| ||||| |||||||||| |  |||||    
T  34346114 tttattactccttttatataaattatataaatagaaacccaaaccctaaatcatttcactcacacagtcagagtctcagtcttttagatgagagtcactt 34346213  T
Q  289 attatagttctctcttttctccttctatatctcacactctcggtctct 336  Q
    || |||||||| |||||||| |||| |||||||||| |||||| ||||    
T  34346214 atcatagttctatcttttcttcttccatatctcacattctcggcctct 34346261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 91 - 328
Target Start/End: Original strand, 8320797 - 8321034
Alignment:
Q  91 ggtttgagtttttcccgatttcaaaacacgggtacgggacgggtaatagggagataggtacccaccccaaactcgtactcaaactcgtccggaatgtaga 190  Q
    |||||| ||||| ||| |||||||||||||||||||| || ||||| ||||| |||| || | ||||| ||| | ||| || || ||| | ||||| | |    
T  8320797 ggtttgggttttccccaatttcaaaacacgggtacggaacaggtaacagggatatagatatcgaccccgaacccatacccagacccgttctgaatgcaaa 8320896  T
Q  191 aaatcaatttattactcattttatataaatagaaaccaaaactctgaatcatttcacccacacagttagagtttcagttttttagatgacatccacttat 290  Q
    ||||||| |||||||||  ||||  |||||||||||  |||| || |||||||||||  ||||||| ||||| || || ||| ||| ||||| |||||||    
T  8320897 aaatcaacttattactccatttacgtaaatagaaacttaaaccctaaatcatttcacttacacagtcagagtctcggtctttcagacgacattcacttat 8320996  T
Q  291 tatagttctctcttttctccttctatatctcacactct 328  Q
     |||||| ||| |||||| | || ||||||||||||||    
T  8320997 catagttatctattttcttcgtccatatctcacactct 8321034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 92 - 235
Target Start/End: Original strand, 256495 - 256639
Alignment:
Q  92 gtttgagtttttcccgatttcaaaacacgggtacgggacgggtaatagggagataggtacccaccccaaactcgtactcaaactcgtccggaatgtagaa 191  Q
    ||||||||||| ||||||||||||||| ||||||| |||||||||| || | ||||||||||||||||||| | ||| ||||| | |||  |||||||||    
T  256495 gtttgagttttccccgatttcaaaacatgggtacgagacgggtaatgggcatataggtacccaccccaaacccatacccaaacccctcctaaatgtagaa 256594  T
Q  192 aatcaatttattactcattttatat-aaatagaaaccaaaactct 235  Q
    |||||||||| ||| | |||||| | ||||||||||  |||||||    
T  256595 aatcaatttactaccccttttatttaaaatagaaacacaaactct 256639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 99 - 326
Target Start/End: Complemental strand, 20349142 - 20348916
Alignment:
Q  99 tttttcccgatttcaaaacacgggtacgggacgggtaatagggagataggtacccaccccaaactcgtactcaaactcgtccggaatgtagaaaatcaat 198  Q
    |||| ||||||||||||||||||||| |||||| ||||  |||| ||||||||||||||| ||||| ||| ||||  |||    |||||| ||||| |||    
T  20349142 ttttccccgatttcaaaacacgggtatgggacgagtaacggggatataggtacccaccccgaactcatacccaaatccgttgcaaatgtaaaaaattaat 20349043  T
Q  199 ttattactcattttatat-aaatagaaaccaaaactctgaatcatttcacccacacagttagagtttcagttttttagatgacatccacttattatagtt 297  Q
    ||||||| | |||||||| ||||| ||||  |||| || ||||| ||||| |||||  | ||||| |  |  ||| ||||||||   |||||| ||||||    
T  20349042 ttattacactttttatataaaatataaactcaaaccctaaatcacttcactcacac--tcagagtcttggactttcagatgacacttacttatcatagtt 20348945  T
Q  298 ctctcttttctccttctatatctcacact 326  Q
    |||||||||||||||| ||||||||||||    
T  20348944 ctctcttttctccttccatatctcacact 20348916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 114 - 324
Target Start/End: Original strand, 1947817 - 1948026
Alignment:
Q  114 aaacacgggtacgggacgggtaatagggagataggtacccaccccaaactcgtactcaaactcgtccggaatgtagaaaatcaatttattactcatttta 213  Q
    ||||| |||||||||  ||||||| |||| ||| |||| || | ||||| | ||||||||||||| |  ||||||||||||||||||||||| | |||||    
T  1947817 aaacaggggtacggggtgggtaat-gggatatatgtactcatctcaaacccatactcaaactcgttccaaatgtagaaaatcaatttattacccctttta 1947915  T
Q  214 tataaatagaaaccaaaactctgaatcatttcacccacacagttagagtttcagttttttagatgacatccacttattatagttctctcttttctccttc 313  Q
    |||||||| ||| | |||| || | |||||  || |||||||| ||||| || |  ||| ||||||||  ||||||| ||||||| ||||||||| |||     
T  1947916 tataaataaaaatccaaaccctaagtcattatactcacacagtcagagtatctgactttcagatgacactcacttatcatagttccctcttttctacttt 1948015  T
Q  314 tatatctcaca 324  Q
     ||||||||||    
T  1948016 catatctcaca 1948026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 89 - 226
Target Start/End: Complemental strand, 13769160 - 13769023
Alignment:
Q  89 tgggtttgagtttttcccgatttcaaaacacgggtacgggacgggtaatagggagataggtacccaccccaaactcgtactcaaactcgtccggaatgta 188  Q
    |||||||  ||||| ||||| ||||||||| ||||| |||||||||||  |  | ||||||||||||||  ||| | ||  ||||| ||||| |||||||    
T  13769160 tgggtttcggttttccccgacttcaaaacatgggtatgggacgggtaacggacatataggtacccacccagaacccatatccaaacccgtcctgaatgta 13769061  T
Q  189 gaaaatcaatttattactcattttatataaatagaaac 226  Q
    ||||||||||||||||||| |||||||||||| |||||    
T  13769060 gaaaatcaatttattactccttttatataaattgaaac 13769023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 182 - 328
Target Start/End: Original strand, 2126714 - 2126860
Alignment:
Q  182 gaatgtagaaaatcaatttattactcattttatataaatagaaaccaaaactctgaatcatttcacccacacagttagagtttcagttttttagatgaca 281  Q
    ||||| ||||||| | |||||||| | ||||||||| ||||||||  || || | |||||||||||  ||| ||||| ||| || || |||||||| |||    
T  2126714 gaatgaagaaaataagtttattaccccttttatatagatagaaactcaagctttaaatcatttcacttacagagttaaagtctcggtattttagatcaca 2126813  T
Q  282 tccacttattatagttctctcttttctccttctatatctcacactct 328  Q
      || |||| |||||||||||||||||||||| ||||||||||||||    
T  2126814 ctcagttatcatagttctctcttttctccttccatatctcacactct 2126860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 89 - 158
Target Start/End: Original strand, 28079696 - 28079765
Alignment:
Q  89 tgggtttgagtttttcccgatttcaaaacacgggtacgggacgggtaatagggagataggtacccacccc 158  Q
    |||||||| ||||| ||||||||||||||| |||||||||||||||||  |||| |||||||||||||||    
T  28079696 tgggtttgggttttccccgatttcaaaacatgggtacgggacgggtaacggggatataggtacccacccc 28079765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 98 - 194
Target Start/End: Complemental strand, 32532619 - 32532523
Alignment:
Q  98 gtttttcccgatttcaaaacacgggtacgggacgggtaatagggagataggtacccaccccaaactcgtactcaaactcgtccggaatgtagaaaat 194  Q
    ||||| ||||||||||||||||||||| |||||||||||| || | ||||||||||||||| ||| | |||||| || |||||  |||||| |||||    
T  32532619 gttttccccgatttcaaaacacgggtatgggacgggtaatgggtatataggtacccaccccgaacccatactcatacccgtcccaaatgtaaaaaat 32532523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 109 - 336
Target Start/End: Original strand, 10925463 - 10925690
Alignment:
Q  109 tttcaaaacacgggtacgggacgggtaatagggagataggtacccaccccaaactcgtactcaaactcgtccggaatgtagaaaatcaatttattactca 208  Q
    |||||||||| ||||||| || ||||||| | || ||| ||| ||||||| ||| | |||  |||||| | | ||||||| ||||  ||||||||| ||     
T  10925463 tttcaaaacatgggtacgagatgggtaatggagatataagtatccaccccgaacccatacctaaactcattccgaatgtaaaaaaataatttattattcc 10925562  T
Q  209 ttttatataaatagaaaccaaaactctgaatcatttcacccacacagttagagtttcagttttttagatgacatccacttattatagttctctcttttct 308  Q
    |||||||||||||||| |  |||| || |||||||||||  ||||| | | ||||| ||| ||| | | ||||  ||||| |   |||||||||| ||||    
T  10925563 ttttatataaatagaatctgaaaccctaaatcatttcactaacacaatcaaagttttagtctttcaaacgacactcacttctctaagttctctctcttct 10925662  T
Q  309 ccttctatatctcacactctcggtctct 336  Q
    ||||| ||| ||||||| ||||||||||    
T  10925663 ccttccatacctcacaccctcggtctct 10925690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 58 - 193
Target Start/End: Complemental strand, 32053207 - 32053072
Alignment:
Q  58 tttgacgtgttttttccgttttgactgaatttgggtttgagtttttcccgatttcaaaacacgggtacgggacgggtaatagggagataggtacccaccc 157  Q
    ||||||| |||||  ||||||||||||  ||||||| || ||||| ||||||||||||||| || || |||||||||||  || | ||| ||||||||||    
T  32053207 tttgacgggttttccccgttttgactgggtttgggtatgggttttccccgatttcaaaacatggatatgggacgggtaacgggtatatatgtacccaccc 32053108  T
Q  158 caaactcgtactcaaactcgtccggaatgtagaaaa 193  Q
    ||||| | ||| ||||| |||||  |||||| ||||    
T  32053107 caaacccatacccaaacccgtccaaaatgtaaaaaa 32053072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 88 - 218
Target Start/End: Complemental strand, 32959949 - 32959820
Alignment:
Q  88 ttgggtttgagtttttcccgatttcaaaacacgggtacgggacgggtaatagggagataggtacccaccccaaactcgtactcaaactcgtccggaatgt 187  Q
    ||||||||| ||||| ||  |||||||||||||||||||| ||||||||  |||| ||||||| ||||||| ||| | ||| ||||  ||||   |||||    
T  32959949 ttgggtttgggttttccctaatttcaaaacacgggtacggaacgggtaacggggatataggtatccaccccgaacccatac-caaatccgtcataaatgt 32959851  T
Q  188 agaaaatcaatttattactcattttatataa 218  Q
    |||||||||||||||||| | | ||||||||    
T  32959850 agaaaatcaatttattacccctattatataa 32959820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 73 - 163
Target Start/End: Original strand, 34178313 - 34178403
Alignment:
Q  73 ccgttttgactgaatttgggtttgagtttttcccgatttcaaaacacgggtacgggacgggtaatagggagataggtacccaccccaaact 163  Q
    |||||||||| |  ||||||| || ||||  || |||||||||||||||||||| ||||||||| | ||| ||||||||||||||||||||    
T  34178313 ccgttttgacagggtttgggtatgggtttcccctgatttcaaaacacgggtacgagacgggtaacaaggatataggtacccaccccaaact 34178403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 91 - 180
Target Start/End: Original strand, 14410857 - 14410946
Alignment:
Q  91 ggtttgagtttttcccgatttcaaaacacgggtacgggacgggtaatagggagataggtacccaccccaaactcgtactcaaactcgtcc 180  Q
    |||||||||||| || |||||||||||||||||| |||||||||||  || | ||||||||||||||| ||| | ||| ||||| |||||    
T  14410857 ggtttgagttttcccagatttcaaaacacgggtatgggacgggtaacgggtatataggtacccaccccgaacccatacccaaacccgtcc 14410946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 88 - 192
Target Start/End: Original strand, 29199884 - 29199988
Alignment:
Q  88 ttgggtttgagtttttcccgatttcaaaacacgggtacgggacgggtaatagggagataggtacccaccccaaactcgtactcaaactcgtccggaatgt 187  Q
    |||||||||  |||| ||||||||||||| ||||||||||||||||||| ||||| ||| ||| | ||||| ||| | ||| |||||||  || ||||||    
T  29199884 ttgggtttggattttccccgatttcaaaatacgggtacgggacgggtaacagggatatatgtatctaccccgaacccatacccaaactctacccgaatgt 29199983  T
Q  188 agaaa 192  Q
    |||||    
T  29199984 agaaa 29199988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 92 - 196
Target Start/End: Complemental strand, 29341341 - 29341237
Alignment:
Q  92 gtttgagtttttcccgatttcaaaacacgggtacgggacgggtaatagggagataggtacccaccccaaactcgtactcaaactcgtccggaatgtagaa 191  Q
    ||||| ||||||||||||||  ||||| ||| | | |||||||||  | || ||||||||||| ||||||||| ||| ||||| ||||| ||||||||||    
T  29341341 gtttgggtttttcccgattttcaaacatgggcatgagacgggtaacggagatataggtacccatcccaaactcatacccaaacccgtcccgaatgtagaa 29341242  T
Q  192 aatca 196  Q
    |||||    
T  29341241 aatca 29341237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 92 - 174
Target Start/End: Complemental strand, 18908978 - 18908896
Alignment:
Q  92 gtttgagtttttcccgatttcaaaacacgggtacgggacgggtaatagggagataggtacccaccccaaactcgtactcaaac 174  Q
    ||||| ||||| ||||||||||||| |||| || ||||||||||| | ||| ||| ||||||||||||||||| ||| |||||    
T  18908978 gtttgggttttccccgatttcaaaatacggatatgggacgggtaacaaggatatatgtacccaccccaaactcatacccaaac 18908896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 89 - 194
Target Start/End: Complemental strand, 27738860 - 27738755
Alignment:
Q  89 tgggtttgagtttttcccgatttcaaaacacgggtacgggacgggtaatagggagataggtacccaccccaaactcgtactcaaactcgtccggaatgta 188  Q
    ||||| || ||||| ||||||||||||||||||||| ||||||||||| ||  | ||| ||||||||||| ||| | ||| ||||| |||||  ||||||    
T  27738860 tgggtatgggttttccccgatttcaaaacacgggtatgggacgggtaacagatatatatgtacccaccccgaacccatacccaaacccgtcccaaatgta 27738761  T
Q  189 gaaaat 194  Q
     |||||    
T  27738760 aaaaat 27738755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 89 - 194
Target Start/End: Complemental strand, 32853932 - 32853827
Alignment:
Q  89 tgggtttgagtttttcccgatttcaaaacacgggtacgggacgggtaatagggagataggtacccaccccaaactcgtactcaaactcgtccggaatgta 188  Q
    ||||| || ||||| |||||| |||||||||||||| |||||||||||  || | ||||||||||||||| ||| | ||| ||||| |||||  ||||||    
T  32853932 tgggtatgggttttccccgatctcaaaacacgggtatgggacgggtaacgggtatataggtacccaccccgaacccatacccaaacccgtcccaaatgta 32853833  T
Q  189 gaaaat 194  Q
     |||||    
T  32853832 aaaaat 32853827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 89 - 193
Target Start/End: Complemental strand, 14506174 - 14506070
Alignment:
Q  89 tgggtttgagtttttcccgatttcaaaacacgggtacgggacgggtaatagggagataggtacccaccccaaactcgtactcaaactcgtccggaatgta 188  Q
    |||||||| ||||| |||||||||||||||| |||| ||||||||||| | | |  |||||||||||||| ||| | |||| |||| |||||  |||| |    
T  14506174 tgggtttgggttttccccgatttcaaaacacaggtatgggacgggtaacaagtatttaggtacccaccccgaacccatacttaaacccgtcccaaatgca 14506075  T
Q  189 gaaaa 193  Q
    |||||    
T  14506074 gaaaa 14506070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 292 - 336
Target Start/End: Complemental strand, 29340805 - 29340761
Alignment:
Q  292 atagttctctcttttctccttctatatctcacactctcggtctct 336  Q
    |||||||||||||||||||||| ||||||||||||||||| ||||    
T  29340805 atagttctctcttttctccttcgatatctcacactctcggcctct 29340761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 87 - 158
Target Start/End: Original strand, 21875647 - 21875718
Alignment:
Q  87 tttgggtttgagtttttcccgatttcaaaacacgggtacgggacgggtaatagggagataggtacccacccc 158  Q
    ||||||||||||||||  || |||| | |||||||||||||||||| ||| | |||||||| ||||||||||    
T  21875647 tttgggtttgagttttctccaattttataacacgggtacgggacggataacatggagatagatacccacccc 21875718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 88 - 186
Target Start/End: Original strand, 7393886 - 7393984
Alignment:
Q  88 ttgggtttgagtttttcccgatttcaaaacacgggtacgggacgggtaatagggagataggtacccaccccaaactcgtactcaaactcgtccggaatg 186  Q
    |||||||||  |||| ||||||||||||||||| ||| | ||||| |||| || | ||||||| ||||||| ||| | ||||||||||| ||| |||||    
T  7393886 ttgggtttggattttccccgatttcaaaacacgagtaagagacggataatgggtatataggtatccaccccgaacccatactcaaactcatcctgaatg 7393984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 89 - 174
Target Start/End: Original strand, 5108931 - 5109016
Alignment:
Q  89 tgggtttgagtttttcccgatttcaaaacacgggtacgggacgggtaatagggagataggtacccaccccaaactcgtactcaaac 174  Q
    |||||||||||||||||||||||||||||| | ||| |||| |  | | ||||| ||| ||||||||||| ||||| ||| |||||    
T  5108931 tgggtttgagtttttcccgatttcaaaacatgtgtatgggatgaatgacagggatataagtacccaccccgaactcatacccaaac 5109016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 89 - 194
Target Start/End: Original strand, 24602856 - 24602961
Alignment:
Q  89 tgggtttgagtttttcccgatttcaaaacacgggtacgggacgggtaatagggagataggtacccaccccaaactcgtactcaaactcgtccggaatgta 188  Q
    |||||||| ||||| || |||||||||||| ||||| | ||||||||| ||| | |||| |||||||||| ||| | ||| ||||| | ||  |||||||    
T  24602856 tgggtttgggttttcccagatttcaaaacatgggtatgtgacgggtaacaggtatatagatacccaccccgaacccatacccaaacccatcacgaatgta 24602955  T
Q  189 gaaaat 194  Q
    ||||||    
T  24602956 gaaaat 24602961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 89 - 158
Target Start/End: Complemental strand, 27534772 - 27534703
Alignment:
Q  89 tgggtttgagtttttcccgatttcaaaacacgggtacgggacgggtaatagggagataggtacccacccc 158  Q
    ||||| |||||||| |||||| || ||||||||||| |||||||||||  || | |||||||||||||||    
T  27534772 tgggtatgagttttccccgatctcgaaacacgggtatgggacgggtaacgggtatataggtacccacccc 27534703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 89 - 193
Target Start/End: Original strand, 5863383 - 5863487
Alignment:
Q  89 tgggtttgagtttttcccgatttcaaaacacgggtacgggacgggtaatagggagataggtacccaccccaaactcgtactcaaactcgtccggaatgta 188  Q
    ||||| || ||||| ||||||||||||||||||||| |||||||||||  || | |||| |||||||| | ||| | ||| ||||| |||||  ||||||    
T  5863383 tgggtatgggttttccccgatttcaaaacacgggtatgggacgggtaacgggtatatagatacccacctcgaacccatacccaaacccgtcccaaatgta 5863482  T
Q  189 gaaaa 193  Q
     ||||    
T  5863483 aaaaa 5863487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 100 - 136
Target Start/End: Complemental strand, 9442507 - 9442471
Alignment:
Q  100 ttttcccgatttcaaaacacgggtacgggacgggtaa 136  Q
    ||||||||||||||||||||||||| |||||||||||    
T  9442507 ttttcccgatttcaaaacacgggtatgggacgggtaa 9442471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 98 - 194
Target Start/End: Complemental strand, 11762524 - 11762428
Alignment:
Q  98 gtttttcccgatttcaaaacacgggtacgggacgggtaatagggagataggtacccaccccaaactcgtactcaaactcgtccggaatgtagaaaat 194  Q
    ||||||||||||||| ||||| ||||| |||||||||||  || | ||||||  ||||||| ||||| ||| ||||| | |||  ||||||||||||    
T  11762524 gtttttcccgatttctaaacaagggtatgggacgggtaacgggtatataggtgtccaccccgaactcatacccaaacccatcccaaatgtagaaaat 11762428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 182 - 226
Target Start/End: Complemental strand, 14321862 - 14321818
Alignment:
Q  182 gaatgtagaaaatcaatttattactcattttatataaatagaaac 226  Q
    ||||||||||||| ||||||||||  |||||||||||||||||||    
T  14321862 gaatgtagaaaattaatttattacctattttatataaatagaaac 14321818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 292 - 336
Target Start/End: Original strand, 29342114 - 29342158
Alignment:
Q  292 atagttctctcttttctccttctatatctcacactctcggtctct 336  Q
    |||||||||||||||||||||  ||||||||||||||||| ||||    
T  29342114 atagttctctcttttctcctttgatatctcacactctcggcctct 29342158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 177 - 244
Target Start/End: Original strand, 34179096 - 34179164
Alignment:
Q  177 gtccggaatgtagaaaatcaatttatta-ctcattttatataaatagaaaccaaaactctgaatcattt 244  Q
    |||| |||||| |||||||||||||||| ||| ||||||||||||||||||  |||| || ||||||||    
T  34179096 gtcctgaatgttgaaaatcaatttattacctctttttatataaatagaaactcaaaccctaaatcattt 34179164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 89 - 180
Target Start/End: Complemental strand, 2367414 - 2367323
Alignment:
Q  89 tgggtttgagtttttcccgatttcaaaacacgggtacgggacgggtaatagggagataggtacccaccccaaactcgtactcaaactcgtcc 180  Q
    ||||| || ||||| |||||| |||||||||||||| |||||||||||  || | ||| ||||||||||| ||| | ||| ||||| |||||    
T  2367414 tgggtatgggttttccccgatctcaaaacacgggtatgggacgggtaacgggtatataagtacccaccccgaacccatacccaaacccgtcc 2367323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 98 - 137
Target Start/End: Original strand, 7978595 - 7978634
Alignment:
Q  98 gtttttcccgatttcaaaacacgggtacgggacgggtaat 137  Q
    ||||||||||||||||||| |||||||||||||| |||||    
T  7978595 gtttttcccgatttcaaaatacgggtacgggacgtgtaat 7978634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 92 - 194
Target Start/End: Original strand, 12678097 - 12678199
Alignment:
Q  92 gtttgagtttttcccgatttcaaaacacgggtacgggacgggtaatagggagataggtacccaccccaaactcgtactcaaactcgtccggaatgtagaa 191  Q
    ||||| ||||| ||||||||||| |||| |||| |||||||||||  || | ||||||||||||||  ||| | ||| ||||| ||||| ||||  ||||    
T  12678097 gtttgcgttttccccgatttcaagacacaggtatgggacgggtaaagggtatataggtacccaccctgaacccatacccaaacccgtcccgaattgagaa 12678196  T
Q  192 aat 194  Q
    |||    
T  12678197 aat 12678199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 89 - 203
Target Start/End: Original strand, 16405410 - 16405524
Alignment:
Q  89 tgggtttgagtttttcccgatttcaaaacacgggtacgggacgggtaatagggagataggtacccaccccaaactcgtactcaaactcgtccggaatgta 188  Q
    |||||||||||||||||  |||||||||||||| ||||| ||  |||  || || ||| |||| |||||  ||||| ||||||||| ||||| |||  ||    
T  16405410 tgggtttgagtttttccgaatttcaaaacacggatacggaacaagtaccagagatatatgtacacaccctgaactcatactcaaacccgtcccgaaatta 16405509  T
Q  189 gaaaatcaatttatt 203  Q
    |||||| | ||||||    
T  16405510 gaaaattactttatt 16405524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 89 - 174
Target Start/End: Original strand, 10142518 - 10142603
Alignment:
Q  89 tgggtttgagtttttcccgatttcaaaacacgggtacgggacgggtaatagggagataggtacccaccccaaactcgtactcaaac 174  Q
    ||||| || ||||| |||||| |||||| ||||||| ||||| |||||  || | ||||||||||||||| ||||| ||| |||||    
T  10142518 tgggtatgggttttccccgatctcaaaaaacgggtatgggacaggtaacgggtatataggtacccaccccgaactcatacccaaac 10142603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 98 - 154
Target Start/End: Complemental strand, 15498403 - 15498347
Alignment:
Q  98 gtttttcccgatttcaaaacacgggtacgggacgggtaatagggagataggtaccca 154  Q
    ||||| ||||||||||||||||||||| | ||| |||||| || | |||||||||||    
T  15498403 gttttccccgatttcaaaacacgggtatgagacaggtaatgggtatataggtaccca 15498347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 79; Significance: 7e-37; HSPs: 56)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 188 - 326
Target Start/End: Original strand, 11472811 - 11472949
Alignment:
Q  188 agaaaatcaatttattactcattttatataaatagaaaccaaaactctgaatcatttcacccacacagttagagtttcagttttttagatgacatccact 287  Q
    |||||||||||||||||  | |||||||||||||||||||||||| || ||||||||||| |||  ||||||||| ||||| ||||||||||||  ||||    
T  11472811 agaaaatcaatttattataccttttatataaatagaaaccaaaaccctaaatcatttcactcacgtagttagagtctcagtcttttagatgacactcact 11472910  T
Q  288 tattatagttctctcttttctccttctatatctcacact 326  Q
    ||| ||||||||||||| |||||||| ||||||||||||    
T  11472911 tatcatagttctctcttatctccttccatatctcacact 11472949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 89 - 300
Target Start/End: Original strand, 23475263 - 23475475
Alignment:
Q  89 tgggtttgagtttttcccgatttcaaaacacgggtacgggacgggtaatagggagataggtacccaccccaaactcgtactcaaactcgtccggaatgt- 187  Q
    |||||||| ||||||||||||||||||||||||||  |||| ||||||| |||| ||| ||||||||  | ||| | ||| ||||| ||||| ||||||     
T  23475263 tgggtttgggtttttcccgatttcaaaacacgggtttgggatgggtaatggggatatatgtacccacttcgaacccatacccaaacccgtcccgaatgta 23475362  T
Q  188 agaaaatcaatttattactcattttatataaatagaaaccaaaactctgaatcatttcacccacacagttagagtttcagttttttagatgacatccact 287  Q
    | |||||||||||| ||| | |||| |||||||| ||||| ||||||| ||||||||||| |||| ||| |||||  |||| ||| ||||||||  || |    
T  23475363 aaaaaatcaatttactacccgttttgtataaataaaaacccaaactctaaatcatttcactcacatagtcagagtcccagtgtttcagatgacactcatt 23475462  T
Q  288 tattatagttctc 300  Q
    ||||| |||||||    
T  23475463 tattacagttctc 23475475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 89 - 336
Target Start/End: Complemental strand, 3774162 - 3773915
Alignment:
Q  89 tgggtttgagtttttcccgatttcaaaacacgggtacgggacgggtaatagggagataggtacccaccccaaactcgtactcaaactcgtccggaatgta 188  Q
    |||||||||||||| ||| | || | || | ||| ||| |||||||||   ||| ||||||||||||||  ||| | ||||||||  ||||| |||| ||    
T  3774162 tgggtttgagttttccccaactttataaaatgggcacgagacgggtaacgaggatataggtacccaccctgaacccatactcaaatccgtcccgaattta 3774063  T
Q  189 gaaaatcaatttattactcattttatataaatagaaaccaaaactctgaatcatttcacccacacagttagagtttcagttttttagatgacatccactt 288  Q
    ||||||||||||||||| | |||||||||| ||| |||| |||| |  |||||||| || |||||||| ||||||||||  ||| | |||||| ||| ||    
T  3774062 gaaaatcaatttattaccccttttatataattaggaacccaaacgcaaaatcattttactcacacagtcagagtttcagactttcatatgacacccattt 3773963  T
Q  289 attatagttctctcttttctccttctatatctcacactctcggtctct 336  Q
    || |||||||| ||||||||||||  ||  ||||||||||||| ||||    
T  3773962 atcatagttctatcttttctcctttcatgcctcacactctcggcctct 3773915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 89 - 329
Target Start/End: Complemental strand, 3157176 - 3156936
Alignment:
Q  89 tgggtttgagtttttcccgatttcaaaacacgggtacgggacgggtaatagggagataggtacccaccccaaactcgtactcaaactcgtccggaatgta 188  Q
    |||||||  ||||| ||||||||||||| | ||||| ||||||| |||  |||| |||||||||||| || |||   ||| ||||| |||||  ||  ||    
T  3157176 tgggtttaggttttccccgatttcaaaatatgggtatgggacggataacggggatataggtacccacaccgaacctatacccaaacccgtcccaaacata 3157077  T
Q  189 gaaaatcaatttattactcattttatataaatagaaaccaaaactctgaatcatttcacccacacagttagagtttcagttttttagatgacatccactt 288  Q
    ||||||||||||||||| | |  |||||||||||||||| |||  || |||| |||||| | |  ||| ||||| |  || ||||||||||||  |||||    
T  3157076 gaaaatcaatttattacccctactatataaatagaaacccaaatcctaaatcctttcactcgcgtagtcagagtcttggtcttttagatgacactcactt 3156977  T
Q  289 attatagttctctcttttctccttctatatctcacactctc 329  Q
    |||||||||||||||||| |||||| |||| ||||||||||    
T  3156976 attatagttctctcttttttccttccatatgtcacactctc 3156936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 89 - 336
Target Start/End: Original strand, 23533604 - 23533852
Alignment:
Q  89 tgggtttgagtttttcccgatttcaaaacacgggtacgggacgggtaatagggagataggtacccaccccaaactcgtactcaaactcgtccggaatgta 188  Q
    |||||||| ||||| |||||||| |||| ||||||| | || ||||||| |||| ||| ||||||||  | ||| | ||| ||||||||||| |||||||    
T  23533604 tgggtttgggttttccccgatttgaaaatacgggtatgcgatgggtaat-gggatatatgtacccacttcgaacccatacccaaactcgtcccgaatgta 23533702  T
Q  189 gaaaa-tcaatttatta-ctcattttatataaatagaaaccaaaactctgaatcatttcacccacacagttagagtttcagttttttagatgacatccac 286  Q
     |||| |||||||| || | | |||| ||||| |||||||| ||||||| ||||||||||| |||| ||| ||||| ||||| ||| ||||||||  ||     
T  23533703 aaaaaatcaatttactaaccccttttgtataattagaaacccaaactctaaatcatttcactcacatagtcagagtctcagtgtttcagatgacactcat 23533802  T
Q  287 ttattatagttctctcttttctccttctatatctcacactctcggtctct 336  Q
    |||||| |||||||||| || || ||  |||||||||| |||||| ||||    
T  23533803 ttattacagttctctctattttcatttcatatctcacattctcggcctct 23533852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 89 - 324
Target Start/End: Original strand, 19440010 - 19440246
Alignment:
Q  89 tgggtttgagtttttcccgatttcaaaacacgggtacgggacgggtaatagggagataggtacccaccccaaactcgtactcaaactcgtccggaatgta 188  Q
    |||||||||||||| || ||||| |||||||||||  |||| ||||||| |||| ||| ||||||||  | ||| | ||| ||||| ||||| |||||||    
T  19440010 tgggtttgagttttccctgatttgaaaacacgggtttgggatgggtaatggggatatatgtacccacttcgaacccatacccaaacccgtcccgaatgta 19440109  T
Q  189 gaaaa-tcaatttattactcattttatataaatagaaaccaaaactctgaatcatttcacccacacagttagagtttcagttttttagatgacatccact 287  Q
     |||| ||||||||  || | |||  |||||||||||||| ||||||| ||||||||||| |||| ||| ||||| ||||| ||  ||||||||  || |    
T  19440110 aaaaaatcaatttaccacccctttggtataaatagaaacccaaactctaaatcatttcactcacatagtcagagtctcagtgttccagatgacactcatt 19440209  T
Q  288 tattatagttctctcttttctccttctatatctcaca 324  Q
    |||||  ||||||||| || || ||  ||||||||||    
T  19440210 tattacggttctctctattttcatttcatatctcaca 19440246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 177 - 324
Target Start/End: Complemental strand, 31345531 - 31345384
Alignment:
Q  177 gtccggaatgtagaaaatcaatttattactcattttatataaatagaaaccaaaactctgaatcatttcacccacacagttagagtttcagttttttaga 276  Q
    |||| ||||||| |||||||||||| |||   ||||||||||||||||||  |||||||  |||||||||| |||||| | | ||| |||||  ||||||    
T  31345531 gtcccgaatgtaaaaaatcaatttactaccatttttatataaatagaaactcaaactctatatcatttcactcacacaatcaaagtctcagtcatttaga 31345432  T
Q  277 tgacatccacttattatagttctctcttttctccttctatatctcaca 324  Q
    |||||  ||||||| ||| ||||||||||||| |||| ||||||||||    
T  31345431 tgacactcacttatcataattctctcttttcttcttccatatctcaca 31345384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 88 - 247
Target Start/End: Original strand, 43550416 - 43550574
Alignment:
Q  88 ttgggtttgagtttttcccgatttcaaaacacgggtacgggacgggtaatagggagataggtacccaccccaaactcgtactcaaactcgtccggaatgt 187  Q
    ||||||||||||||| |||| ||| ||||||| | |||| ||| ||||||||||| ||| |||| ||||| || ||| ||| ||||| ||||| ||||||    
T  43550416 ttgggtttgagttttccccgtttttaaaacacagatacgagactggtaatagggatatatgtactcacccgaa-ctcatacacaaacccgtcctgaatgt 43550514  T
Q  188 agaaaatcaatttattactcattttatataaatagaaaccaaaactctgaatcatttcac 247  Q
     |||| || ||||||||| | || |||||||||||||||| |||| || |||||||||||    
T  43550515 ggaaagtctatttattaccccttctatataaatagaaacccaaaccctaaatcatttcac 43550574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 77 - 247
Target Start/End: Complemental strand, 29292809 - 29292637
Alignment:
Q  77 tttgactgaatttgggtttgagtttttcccgatttcaaaacacgggtacgggacgggtaatagggagataggtac--ccaccccaaactcgtactcaaac 174  Q
    ||||||||  ||||||| ||  |||| ||||||||||||||||||||||| || |||||| | ||| ||||||||  |||||| |||| | |||  ||||    
T  29292809 tttgactgggtttgggtatggattttccccgatttcaaaacacgggtacgagatgggtaacatggatataggtacgcccaccctaaacccatacctaaac 29292710  T
Q  175 tcgtccggaatgtagaaaatcaatttattactcattttatataaatagaaaccaaaactctgaatcatttcac 247  Q
    |||||  |||||||||||||||||||| ||| | ||||||||||| ||||| | |||| || ||| |||||||    
T  29292709 tcgtctcgaatgtagaaaatcaatttactaccccttttatataaagagaaatccaaaccctaaattatttcac 29292637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 92 - 336
Target Start/End: Complemental strand, 37218095 - 37217850
Alignment:
Q  92 gtttgagtttttcccgatttcaaaacacgggtacgggacgggtaataggg-agataggtacccaccccaaactcgtactc-aaactcgtccggaatgtag 189  Q
    |||||||||||  || |||||||||||| ||||||||||||||||  ||| | ||| ||||| | ||| ||||| ||| | |||| ||||| |||| |||    
T  37218095 gtttgagttttatcctatttcaaaacacaggtacgggacgggtaacgggggatataagtaccaagcccgaactcataccccaaacccgtcctgaatatag 37217996  T
Q  190 aaaatcaatttatta-ctcattttatataaatagaaaccaaaactctgaatcatttcacccacacagttagagtttcagttttttagatgacatccactt 288  Q
    |||||||||| |||| ||| |||| |||||||||||||  ||   || |||||||| ||  ||||| | ||||| || |||||| | ||||||  ||| |    
T  37217995 aaaatcaatt-attatctc-ttttgtataaatagaaactcaatgcctaaatcattttactaacacaatcagagtctcggtttttcatatgacactcacat 37217898  T
Q  289 attatagttctctcttttctccttctatatctcacactctcggtctct 336  Q
    || ||||||||||||| |||||||| ||||||||||||||||| ||||    
T  37217897 atcatagttctctcttctctccttccatatctcacactctcggcctct 37217850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 89 - 174
Target Start/End: Original strand, 18825872 - 18825957
Alignment:
Q  89 tgggtttgagtttttcccgatttcaaaacacgggtacgggacgggtaatagggagataggtacccaccccaaactcgtactcaaac 174  Q
    |||||||| ||||| ||||||||||||||||||||| |||||||||||  || | ||||||||||||||| ||| ||||| |||||    
T  18825872 tgggtttgggttttccccgatttcaaaacacgggtatgggacgggtaacgggtatataggtacccaccccgaacccgtacccaaac 18825957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 73 - 194
Target Start/End: Original strand, 27850310 - 27850431
Alignment:
Q  73 ccgttttgactgaatttgggtttgagtttttcccgatttcaaaacacgggtacgggacgggtaatagggagataggtacccaccccaaactcgtactcaa 172  Q
    ||||||||| ||  ||||||| || ||||| ||||||||||||||||||||| |||||||||||  ||   ||||||||||| ||| ||| | ||| |||    
T  27850310 ccgttttgattgggtttgggtatgggttttccccgatttcaaaacacgggtatgggacgggtaacgggtgtataggtacccatcccgaacccatacccaa 27850409  T
Q  173 actcgtccggaatgtagaaaat 194  Q
    || ||||| |||||||||||||    
T  27850410 acccgtcccgaatgtagaaaat 27850431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 170 - 247
Target Start/End: Original strand, 36251011 - 36251088
Alignment:
Q  170 caaactcgtccggaatgtagaaaatcaatttattactcattttatataaatagaaaccaaaactctgaatcatttcac 247  Q
    ||||| ||||| ||||||||||||||||||||||||  |||||||||||||| |||| |||||||| || ||||||||    
T  36251011 caaacccgtcccgaatgtagaaaatcaatttattacatattttatataaataaaaactaaaactctaaaccatttcac 36251088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 90 - 254
Target Start/End: Complemental strand, 4101634 - 4101470
Alignment:
Q  90 gggtttgagtttttcccgatttcaaaacacgggtacgggacgggtaatagggagataggtacccaccccaaactcgtactcaaactcgtccggaatgtag 189  Q
    ||||||| ||||| |  ||||||||||||| ||||| ||| |||| | ||||| ||| ||||||| ||  ||| | ||| | ||| ||||| |||||| |    
T  4101634 gggtttgggttttccatgatttcaaaacacaggtacaggatgggttacagggatatatgtacccatcctgaacccataccctaacccgtcctgaatgttg 4101535  T
Q  190 aaaatcaatttattactcattttatataaatagaaaccaaaactctgaatcatttcacccacaca 254  Q
    ||||||||||||||||  ||||||| |||||| ||||  |||| || ||||||||||| ||||||    
T  4101534 aaaatcaatttattaccaattttatttaaataaaaactcaaacccttaatcatttcactcacaca 4101470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 89 - 171
Target Start/End: Original strand, 3226946 - 3227028
Alignment:
Q  89 tgggtttgagtttttcccgatttcaaaacacgggtacgggacgggtaatagggagataggtacccaccccaaactcgtactca 171  Q
    ||||| || ||||| ||||||||||||||||||||| ||||||||||| ||| | ||||||||||||||| ||| | ||||||    
T  3226946 tgggtatgggttttccccgatttcaaaacacgggtatgggacgggtaacaggaatataggtacccaccccgaacccatactca 3227028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 99 - 157
Target Start/End: Original strand, 10990871 - 10990929
Alignment:
Q  99 tttttcccgatttcaaaacacgggtacgggacgggtaatagggagataggtacccaccc 157  Q
    |||| ||||||||||||| ||||||||||||||||||||||||| ||||||| ||||||    
T  10990871 ttttccccgatttcaaaatacgggtacgggacgggtaatagggatataggtatccaccc 10990929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 89 - 194
Target Start/End: Complemental strand, 3920631 - 3920526
Alignment:
Q  89 tgggtttgagtttttcccgatttcaaaacacgggtacgggacgggtaatagggagataggtacccaccccaaactcgtactcaaactcgtccggaatgta 188  Q
    |||||||| ||||| |||||||||||||||| |||| ||||||| ||| ||| | ||||||||||||||| ||| | ||| ||||   |||| |||||||    
T  3920631 tgggtttgggttttccccgatttcaaaacactggtatgggacggataacaggtatataggtacccaccccgaacccatacccaaaactgtcccgaatgta 3920532  T
Q  189 gaaaat 194  Q
    ||||||    
T  3920531 gaaaat 3920526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 66 - 247
Target Start/End: Complemental strand, 24903532 - 24903352
Alignment:
Q  66 gttttttccgttttgactgaatttgggtttgagtttttcccgatttcaaaacacgggtacgggacgggtaatagggagataggtacccaccccaaactcg 165  Q
    |||||| | ||||| | ||| ||||||| |||||||||||  ||||||||||| || || | ||| |||| |||| | ||||||||||| |||||||||     
T  24903532 gtttttcctgtttttattgagtttgggtatgagtttttccaaatttcaaaacaaggttatgagacaggtagtaggtatataggtaccca-cccaaactca 24903434  T
Q  166 tactcaaactcgtccggaatgtagaaaatcaatttattactcattttatataaatagaaaccaaaactctgaatcatttcac 247  Q
    ||| ||||| | ||| | ||||||||||  | ||| |||| | ||||||||||||| |||| ||||| || || ||||||||    
T  24903433 tacacaaacccatcccggatgtagaaaactattttgttaccccttttatataaatataaactaaaacgctaaaccatttcac 24903352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 89 - 193
Target Start/End: Complemental strand, 45380200 - 45380096
Alignment:
Q  89 tgggtttgagtttttcccgatttcaaaacacgggtacgggacgggtaatagggagataggtacccaccccaaactcgtactcaaactcgtccggaatgta 188  Q
    ||||| || ||||||||||||||||||| ||||||| |||||||||||  || | ||||||||||||||| ||| | |||  ||||||||||  ||||||    
T  45380200 tgggtatgggtttttcccgatttcaaaatacgggtatgggacgggtaacgggtatataggtacccaccccgaacccatacctaaactcgtcccaaatgta 45380101  T
Q  189 gaaaa 193  Q
     ||||    
T  45380100 aaaaa 45380096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 89 - 180
Target Start/End: Complemental strand, 12980470 - 12980379
Alignment:
Q  89 tgggtttgagtttttcccgatttcaaaacacgggtacgggacgggtaatagggagataggtacccaccccaaactcgtactcaaactcgtcc 180  Q
    |||||||  ||||| ||||||||||||||||||||| |||||||||||| || | ||| ||||||||||| ||| | ||| ||||| |||||    
T  12980470 tgggttttggttttccccgatttcaaaacacgggtatgggacgggtaatgggtatataagtacccaccccgaacccatacccaaacccgtcc 12980379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 89 - 192
Target Start/End: Complemental strand, 32546285 - 32546182
Alignment:
Q  89 tgggtttgagtttttcccgatttcaaaacacgggtacgggacgggtaatagggagataggtacccaccccaaactcgtactcaaactcgtccggaatgta 188  Q
    ||||||||  |||||||||||||||||| |||||||||| ||||||||  |||| ||| ||||||||||| ||| | ||| ||||| |  || |||||||    
T  32546285 tgggtttggatttttcccgatttcaaaatacgggtacggaacgggtaacggggatatatgtacccaccccgaacccatacccaaaccctacccgaatgta 32546186  T
Q  189 gaaa 192  Q
    ||||    
T  32546185 gaaa 32546182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 92 - 154
Target Start/End: Original strand, 42908044 - 42908106
Alignment:
Q  92 gtttgagtttttcccgatttcaaaacacgggtacgggacgggtaatagggagataggtaccca 154  Q
    ||||| ||||| ||||||||||||| |||||||||||||||||||| |||| ||| |||||||    
T  42908044 gtttgggttttccccgatttcaaaatacgggtacgggacgggtaatggggatatatgtaccca 42908106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 89 - 178
Target Start/End: Complemental strand, 26623044 - 26622955
Alignment:
Q  89 tgggtttgagtttttcccgatttcaaaacacgggtacgggacgggtaatagggagataggtacccaccccaaactcgtactcaaactcgt 178  Q
    |||||||| ||||| || |||||||||||||||||| |||| ||||||| || | ||| ||||||||||| ||| | ||| |||||||||    
T  26623044 tgggtttgggttttccctgatttcaaaacacgggtatgggatgggtaatgggtatataagtacccaccccgaacccatacccaaactcgt 26622955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 89 - 158
Target Start/End: Original strand, 45885765 - 45885834
Alignment:
Q  89 tgggtttgagtttttcccgatttcaaaacacgggtacgggacgggtaatagggagataggtacccacccc 158  Q
    ||||| |||||||| |||||| |||||||||||||| ||||||||||| | | | |||||||||||||||    
T  45885765 tgggtatgagttttccccgatctcaaaacacgggtatgggacgggtaacaagtatataggtacccacccc 45885834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 58 - 179
Target Start/End: Complemental strand, 16079143 - 16079016
Alignment:
Q  58 tttgacgtgttttttccgttttgactgaatttgggt------ttgagtttttcccgatttcaaaacacgggtacgggacgggtaatagggagataggtac 151  Q
    ||||||| |||||||| ||||||||||| |||||||      ||| |||||  ||||| |||||||||||||| |||||||||||  || | |||||| |    
T  16079143 tttgacgagttttttcggttttgactgagtttgggtataagtttgggttttctccgatctcaaaacacgggtatgggacgggtaacgggtatataggtgc 16079044  T
Q  152 ccaccccaaactcgtactcaaactcgtc 179  Q
    |||||||||||   ||| ||||||||||    
T  16079043 ccaccccaaacctatacccaaactcgtc 16079016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 92 - 132
Target Start/End: Original strand, 29014955 - 29014995
Alignment:
Q  92 gtttgagtttttcccgatttcaaaacacgggtacgggacgg 132  Q
    ||||||||||||||||||||||||| |||||||||||||||    
T  29014955 gtttgagtttttcccgatttcaaaatacgggtacgggacgg 29014995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 58 - 158
Target Start/End: Complemental strand, 41103780 - 41103680
Alignment:
Q  58 tttgacgtgttttttccgttttgactgaatttgggtttgagtttttcccgatttcaaaacacgggtacgggacgggtaatagggagataggtacccaccc 157  Q
    |||||||  ||||| ||||||||||||  | ||||| || ||||| ||||||||||||||||||||| ||||||| |||  || | ||| ||||||||||    
T  41103780 tttgacggatttttcccgttttgactgggtgtgggtatgggttttccccgatttcaaaacacgggtatgggacggttaacgggtatataagtacccaccc 41103681  T
Q  158 c 158  Q
    |    
T  41103680 c 41103680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 98 - 158
Target Start/End: Original strand, 44734366 - 44734426
Alignment:
Q  98 gtttttcccgatttcaaaacacgggtacgggacgggtaatagggagataggtacccacccc 158  Q
    ||||||| ||||||||||||||||||| ||||| |||||| || | |||||||||||||||    
T  44734366 gtttttctcgatttcaaaacacgggtatgggaccggtaatgggtatataggtacccacccc 44734426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 98 - 193
Target Start/End: Original strand, 18125237 - 18125332
Alignment:
Q  98 gtttttcccgatttcaaaacacgggtacgggacgggtaatagggagataggtacccaccccaaactcgtactcaaactcgtccggaatgtagaaaa 193  Q
    |||||||||||| || ||||||||||| |||||||||||  || | ||||||||||||||| ||| | ||| ||||| |||||  |||||| ||||    
T  18125237 gtttttcccgatctcgaaacacgggtatgggacgggtaacgggtatataggtacccaccccgaacgcatacccaaacccgtcccaaatgtaaaaaa 18125332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 89 - 156
Target Start/End: Complemental strand, 18684067 - 18684000
Alignment:
Q  89 tgggtttgagtttttcccgatttcaaaacacgggtacgggacgggtaatagggagataggtacccacc 156  Q
    |||||| | ||||| ||||||||||||| ||||||||||||||||||| ||||| ||| ||| |||||    
T  18684067 tgggttcgggttttccccgatttcaaaatacgggtacgggacgggtaacagggatatatgtatccacc 18684000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 89 - 156
Target Start/End: Complemental strand, 22973481 - 22973414
Alignment:
Q  89 tgggtttgagtttttcccgatttcaaaacacgggtacgggacgggtaatagggagataggtacccacc 156  Q
    |||||||| ||||| | ||||||||||| |||||||||||||||||||| |||| ||  |||||||||    
T  22973481 tgggtttgggttttccacgatttcaaaatacgggtacgggacgggtaatggggatatctgtacccacc 22973414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 93 - 136
Target Start/End: Complemental strand, 33841167 - 33841124
Alignment:
Q  93 tttgagtttttcccgatttcaaaacacgggtacgggacgggtaa 136  Q
    |||||||||| ||||||||||||||||||||| |||||||||||    
T  33841167 tttgagttttccccgatttcaaaacacgggtatgggacgggtaa 33841124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 92 - 158
Target Start/End: Complemental strand, 5377175 - 5377109
Alignment:
Q  92 gtttgagtttttcccgatttcaaaacacgggtacgggacgggtaatagggagataggtacccacccc 158  Q
    ||||| ||||| |||||||||||||||| |||| |||||||||||  || | |||||||||||||||    
T  5377175 gtttgggttttccccgatttcaaaacacaggtatgggacgggtaaagggtatataggtacccacccc 5377109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 89 - 158
Target Start/End: Complemental strand, 7780101 - 7780032
Alignment:
Q  89 tgggtttgagtttttcccgatttcaaaacacgggtacgggacgggtaatagggagataggtacccacccc 158  Q
    ||||| || ||||| |||||| |||||||||||||| ||||||| |||| || | |||||||||||||||    
T  7780101 tgggtatgggttttccccgatctcaaaacacgggtatgggacggataatgggtatataggtacccacccc 7780032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 89 - 158
Target Start/End: Complemental strand, 10072559 - 10072490
Alignment:
Q  89 tgggtttgagtttttcccgatttcaaaacacgggtacgggacgggtaatagggagataggtacccacccc 158  Q
    ||||| || ||||| ||||||||||||||||||||| || ||||||||  || | |||||||||||||||    
T  10072559 tgggtatgggttttccccgatttcaaaacacgggtatggaacgggtaacgggtatataggtacccacccc 10072490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 89 - 194
Target Start/End: Complemental strand, 16866262 - 16866157
Alignment:
Q  89 tgggtttgagtttttcccgatttcaaaacacgggtacgggacgggtaatagggagataggtacccaccccaaactcgtactcaaactcgtccggaatgta 188  Q
    ||||| || ||||| |||||| |||||||||||||| |||||| ||||  || | ||||||||||||||| ||| | ||| ||||| |||||  ||||||    
T  16866262 tgggtatgggttttccccgatctcaaaacacgggtatgggacgagtaacgggtatataggtacccaccccgaacccatacccaaacccgtcccaaatgta 16866163  T
Q  189 gaaaat 194  Q
     |||||    
T  16866162 aaaaat 16866157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 88 - 157
Target Start/End: Complemental strand, 24425474 - 24425405
Alignment:
Q  88 ttgggtttgagtttttcccgatttcaaaacacgggtacgggacgggtaatagggagataggtacccaccc 157  Q
    |||||||||| ||||  | |||||||||||||||||| |||||||||||  || | ||||||||||||||    
T  24425474 ttgggtttgaattttctctgatttcaaaacacgggtatgggacgggtaacgggtatataggtacccaccc 24425405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 92 - 193
Target Start/End: Complemental strand, 27063228 - 27063127
Alignment:
Q  92 gtttgagtttttcccgatttcaaaacacgggtacgggacgggtaatagggagataggtacccaccccaaactcgtactcaaactcgtccggaatgtagaa 191  Q
    ||||||||||| | ||||||||||| |||||||| |||||| |||  |||| ||| |||| |||||| ||||| ||| ||||| |  || ||||||||||    
T  27063228 gtttgagttttcctcgatttcaaaatacgggtacaggacggataacggggatatatgtactcaccccgaactcatacccaaaccctacccgaatgtagaa 27063129  T
Q  192 aa 193  Q
    ||    
T  27063128 aa 27063127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 89 - 158
Target Start/End: Complemental strand, 30650724 - 30650655
Alignment:
Q  89 tgggtttgagtttttcccgatttcaaaacacgggtacgggacgggtaatagggagataggtacccacccc 158  Q
    ||||| |||||||| ||| || |||||||||||||| |||||||||||  || | |||||||||||||||    
T  30650724 tgggtatgagttttccccaatctcaaaacacgggtatgggacgggtaacgggtatataggtacccacccc 30650655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 104 - 204
Target Start/End: Original strand, 29855468 - 29855567
Alignment:
Q  104 cccgatttcaaaacacgggtacgggacgggtaatagggagataggtacccaccccaaactcgtactcaaactcgtccggaatgtagaaaatcaatttatt 203  Q
    |||||||||||| |||| ||| |||||||||||| || | ||| |||||||| |||||||  ||  |||||  |||| ||||||| ||||||||||||||    
T  29855468 cccgatttcaaagcacgagtatgggacgggtaatgggcatataagtacccacaccaaactgataaccaaacctgtcccgaatgta-aaaatcaatttatt 29855566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 98 - 158
Target Start/End: Original strand, 39456024 - 39456084
Alignment:
Q  98 gtttttcccgatttcaaaacacgggtacgggacgggtaatagggagataggtacccacccc 158  Q
    ||||| ||||||||||||||| ||||| |||||||||||  || | |||||||||||||||    
T  39456024 gttttccccgatttcaaaacatgggtatgggacgggtaacgggtatataggtacccacccc 39456084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 182 - 270
Target Start/End: Original strand, 40335733 - 40335821
Alignment:
Q  182 gaatgtagaaaatcaatttattactcattttatataaatagaaaccaaaactctgaatcatttcacccacacagttagagtttcagttt 270  Q
    |||||||||||||||| ||||||| | ||||||||| |||||||   |||   ||||||||||||| || ||||| | |||||||||||    
T  40335733 gaatgtagaaaatcaacttattaccctttttatatacatagaaaattaaagcatgaatcatttcactcatacagtcacagtttcagttt 40335821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 67 - 192
Target Start/End: Original strand, 44845107 - 44845238
Alignment:
Q  67 ttttttccgttttgactgaattt------gggtttgagtttttcccgatttcaaaacacgggtacgggacgggtaatagggagataggtacccaccccaa 160  Q
    ||||||||||||||||||| |||      ||||||| ||||| |||||||||| || ||||||||||||||| ||||  ||| |||  |||||||||| |    
T  44845107 ttttttccgttttgactgagttttggtatgggtttgggttttccccgatttcataatacgggtacgggacggttaatgaggatatatttacccaccccga 44845206  T
Q  161 actcgtactcaaactcgtccggaatgtagaaa 192  Q
    || | ||| ||||| |  || |||||||||||    
T  44845207 acccatacacaaaccctgcccgaatgtagaaa 44845238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 92 - 131
Target Start/End: Original strand, 673131 - 673170
Alignment:
Q  92 gtttgagtttttcccgatttcaaaacacgggtacgggacg 131  Q
    ||||||||||||||||||| |||||||||||||| |||||    
T  673131 gtttgagtttttcccgattccaaaacacgggtactggacg 673170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 190 - 325
Target Start/End: Original strand, 6557827 - 6557962
Alignment:
Q  190 aaaatcaatttattactcattttatataaatagaaaccaaaactctgaatcatttcacccacacagttagagtttcagttttttagatgacatccactta 289  Q
    ||||||| |||||||  | ||| ||| |||||||| |  ||||||| ||||||||||| |||||| | | ||| ||||| ||| ||||||||  |||||     
T  6557827 aaaatcagtttattatccttttcatagaaatagaatctcaaactctaaatcatttcactcacacaatcaaagtctcagtctttcagatgacactcacttc 6557926  T
Q  290 ttatagttctctcttttctccttctatatctcacac 325  Q
    |   |||||||||| ||||||||| | |||||||||    
T  6557927 tctaagttctctctcttctccttccacatctcacac 6557962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 89 - 124
Target Start/End: Original strand, 44658467 - 44658502
Alignment:
Q  89 tgggtttgagtttttcccgatttcaaaacacgggta 124  Q
    ||||| ||||||||||||||||||||||||||||||    
T  44658467 tgggtatgagtttttcccgatttcaaaacacgggta 44658502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 105 - 180
Target Start/End: Complemental strand, 48327522 - 48327447
Alignment:
Q  105 ccgatttcaaaacacgggtacgggacgggtaatagggagataggtacccaccccaaactcgtactcaaactcgtcc 180  Q
    |||||||||||| |||||||||| | | ||||| |||| ||||||| ||||| | ||| | |||||||||||||||    
T  48327522 ccgatttcaaaatacgggtacggtatgagtaattgggatataggtatccacctcgaacacatactcaaactcgtcc 48327447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 92 - 158
Target Start/End: Original strand, 10995837 - 10995903
Alignment:
Q  92 gtttgagtttttcccgatttcaaaacacgggtacgggacgggtaatagggagataggtacccacccc 158  Q
    ||||| ||||| ||||||||||| ||||||||| ||||||||||| ||||  |||  ||||||||||    
T  10995837 gtttgggttttccccgatttcaagacacgggtatgggacgggtaacagggttatatatacccacccc 10995903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 100 - 154
Target Start/End: Complemental strand, 24753246 - 24753192
Alignment:
Q  100 ttttcccgatttcaaaacacgggtacgggacgggtaatagggagataggtaccca 154  Q
    |||||||||| |||||||||||||| |||||||||||  || | |||||||||||    
T  24753246 ttttcccgatctcaaaacacgggtatgggacgggtaacgggtatataggtaccca 24753192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 74 - 164
Target Start/End: Original strand, 45708850 - 45708940
Alignment:
Q  74 cgttttgactgaatttgggtttgagtttttcccgatttcaaaacacgggtacgggacgggtaatagggagataggtacccaccccaaactc 164  Q
    |||||||||||  ||| ||| || |||||  ||||| ||||||||||||||  ||||||||||  || | ||||||||||||||| |||||    
T  45708850 cgttttgactgggttttggtatgggttttctccgatctcaaaacacgggtattggacgggtaacgggtatataggtacccaccccgaactc 45708940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 89 - 158
Target Start/End: Original strand, 26004474 - 26004543
Alignment:
Q  89 tgggtttgagtttttcccgatttcaaaacacgggtacgggacgggtaatagggagataggtacccacccc 158  Q
    |||||||| ||||| | ||||||||||||  ||||| ||||||||||| ||| | |||| ||||||||||    
T  26004474 tgggtttgggttttcctcgatttcaaaacttgggtatgggacgggtaacaggtatatagatacccacccc 26004543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 101 - 194
Target Start/End: Original strand, 46127195 - 46127288
Alignment:
Q  101 tttcccgatttcaaaacacgggtacgggacgggtaatagggagataggtacccaccccaaactcgtactcaaactcgtccggaatgtagaaaat 194  Q
    ||||||||||| ||| |||||||| ||||||| ||| |||   |||||||||||| || | ||| ||||||||| |||||  |||| |||||||    
T  46127195 tttcccgatttaaaatcacgggtatgggacggataacaggtgtataggtacccacaccgatctcatactcaaacccgtcccaaatgcagaaaat 46127288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 98 - 158
Target Start/End: Complemental strand, 21702743 - 21702683
Alignment:
Q  98 gtttttcccgatttcaaaacacgggtacgggacgggtaatagggagataggtacccacccc 158  Q
    ||||| |||||| || ||||||||||| |||||||||||  || | |||||||||||||||    
T  21702743 gttttccccgatctcgaaacacgggtatgggacgggtaacgggtatataggtacccacccc 21702683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 89 - 193
Target Start/End: Complemental strand, 35074563 - 35074459
Alignment:
Q  89 tgggtttgagtttttcccgatttcaaaacacgggtacgggacgggtaatagggagataggtacccaccccaaactcgtactcaaactcgtccggaatgta 188  Q
    ||||| || ||||| |||||| | |||||||||||| |||||||||||  || | ||||||||||| ||| ||| | ||| ||||| |||||  ||||||    
T  35074563 tgggtatgggttttccccgatcttaaaacacgggtatgggacgggtaacgggtatataggtacccaacccgaacccatacccaaacccgtcccaaatgta 35074464  T
Q  189 gaaaa 193  Q
     ||||    
T  35074463 aaaaa 35074459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 92 - 136
Target Start/End: Original strand, 37103130 - 37103174
Alignment:
Q  92 gtttgagtttttcccgatttcaaaacacgggtacgggacgggtaa 136  Q
    ||||| |||||||| |||||||||| |||||||||||| ||||||    
T  37103130 gtttgtgtttttcctgatttcaaaatacgggtacgggaagggtaa 37103174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 95 - 135
Target Start/End: Complemental strand, 39317082 - 39317042
Alignment:
Q  95 tgagtttttcccgatttcaaaacacgggtacgggacgggta 135  Q
    |||||||| | ||||||||||||||||||| ||||||||||    
T  39317082 tgagttttcctcgatttcaaaacacgggtatgggacgggta 39317042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0244 (Bit Score: 75; Significance: 2e-34; HSPs: 1)
Name: scaffold0244
Description:

Target: scaffold0244; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 182 - 336
Target Start/End: Original strand, 4673 - 4827
Alignment:
Q  182 gaatgtagaaaatcaatttattactcattttatataaatagaaaccaaaactctgaatcatttcacccacacagttagagtttcagttttttagatgaca 281  Q
    |||||||||||||||| |||| || | ||||||||||||||||| ||||||||| ||||||||||| |||||||| |||||  | || |||||||| |||    
T  4673 gaatgtagaaaatcaaattataaccccttttatataaatagaaatcaaaactctaaatcatttcactcacacagtcagagtcacggtcttttagataaca 4772  T
Q  282 tccacttattatagttctctcttttctccttctatatctcacactctcggtctct 336  Q
      ||||||| ||||||||||||||| |||||| |||| ||||||| |||||||||    
T  4773 ctcacttatcatagttctctcttttttccttccatatttcacactatcggtctct 4827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 49; Significance: 6e-19; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 89 - 193
Target Start/End: Complemental strand, 33481 - 33377
Alignment:
Q  89 tgggtttgagtttttcccgatttcaaaacacgggtacgggacgggtaatagggagataggtacccaccccaaactcgtactcaaactcgtccggaatgta 188  Q
    |||||||| ||||| ||||||||||||||||||||| |||||||||||  || | ||| ||||||||||| ||| | ||| ||||||||||| ||||| |    
T  33481 tgggtttgggttttccccgatttcaaaacacgggtatgggacgggtaacgggtatatatgtacccaccccgaacccatacccaaactcgtcccgaatgca 33382  T
Q  189 gaaaa 193  Q
    |||||    
T  33381 gaaaa 33377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 47; Significance: 9e-18; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 91 - 205
Target Start/End: Original strand, 107393 - 107507
Alignment:
Q  91 ggtttgagtttttcccgatttcaaaacacgggtacgggacgggtaatagggagataggtacccaccccaaactcgtactcaaactcgtccggaatgtaga 190  Q
    |||||||||||||| |||||||||||||| |||| ||||||||||  |  || ||| ||||||||||| ||||| || |||||||||| | |||||| ||    
T  107393 ggtttgagtttttctcgatttcaaaacacaggtatgggacgggtagcatagatataagtacccaccccgaactcatattcaaactcgttccgaatgttga 107492  T
Q  191 aaatcaatttattac 205  Q
    |||| | ||||||||    
T  107493 aaattactttattac 107507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1322 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold1322
Description:

Target: scaffold1322; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 182 - 329
Target Start/End: Complemental strand, 1106 - 960
Alignment:
Q  182 gaatgtagaaaatcaatttattactcattttatataaatagaaac-caaaactctgaatcatttcacccacacagttagagtttcagttttttagatgac 280  Q
    ||||||||||||| |||||||||| |||||||||||||||||||| |||| || | ||||||||||| |||   || | ||| ||| | ||| |||||||    
T  1106 gaatgtagaaaattaatttattacccattttatataaatagaaactcaaatct-taaatcatttcactcacgtggtcaaagtctcattctttaagatgac 1008  T
Q  281 atccacttattatagttctctcttttctccttctatatctcacactctc 329  Q
    |  ||||||| ||| |||||| ||||||||||  |||||||||||||||    
T  1007 aatcacttatcataattctct-ttttctcctttcatatctcacactctc 960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 44; Significance: 5e-16; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 89 - 192
Target Start/End: Complemental strand, 211452 - 211349
Alignment:
Q  89 tgggtttgagtttttcccgatttcaaaacacgggtacgggacgggtaatagggagataggtacccaccccaaactcgtactcaaactcgtccggaatgta 188  Q
    |||||||| |||||  |||||||||||| ||||||||| ||||||||| ||||| ||| ||||||||||| ||| | ||| |||||||  || |||||||    
T  211452 tgggtttgggttttctccgatttcaaaatacgggtacgagacgggtaacagggatatatgtacccaccccgaacccatacccaaactctacctgaatgta 211353  T
Q  189 gaaa 192  Q
    ||||    
T  211352 gaaa 211349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0264 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 1)
Name: scaffold0264
Description:

Target: scaffold0264; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 98 - 247
Target Start/End: Original strand, 17464 - 17613
Alignment:
Q  98 gtttttcccgatttcaaaacacgggtacgggacgggtaatagggagataggtacccaccccaaactcgtactcaaactcgtccggaatgtagaaaatcaa 197  Q
    |||||| |||||||||||||| || ||| ||| ||||||  |||| ||||||| ||| ||||||| | ||  |||||  || | ||||||| |||| | |    
T  17464 gttttttccgatttcaaaacatggatacaggaagggtaacggggatataggtatccatcccaaacccttatccaaacatgtaccgaatgtataaaaccca 17563  T
Q  198 tttattactcattttatataaatagaaaccaaaactctgaatcatttcac 247  Q
    |||||||| ||||||||||||||||||||  ||||  | |||||||||||    
T  17564 tttattacccattttatataaatagaaacgcaaaccataaatcatttcac 17613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0198 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0198
Description:

Target: scaffold0198; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 99 - 213
Target Start/End: Original strand, 20749 - 20863
Alignment:
Q  99 tttttcccgatttcaaaacacgggtacgggacgggtaatagggagataggtacccaccccaaactcgtactcaaactcgtccggaatgtagaaaatcaat 198  Q
    ||||||||||||||||||| || ||| | |||||||||| |||| |||  || ||||| | ||| | ||||||||| ||| | ||||||| |||||||||    
T  20749 tttttcccgatttcaaaactcgagtatgagacgggtaatggggatataaatatccacctcgaacccatactcaaacccgttccgaatgtaaaaaatcaat 20848  T
Q  199 ttattactcatttta 213  Q
    |||||| || |||||    
T  20849 ttattattcgtttta 20863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0519 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0519
Description:

Target: scaffold0519; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 58 - 155
Target Start/End: Complemental strand, 10415 - 10319
Alignment:
Q  58 tttgacgtgttttttccgttttgactgaatttgggtttgagtttttcccgatttcaaaacacgggtacgggacgggtaatagggagataggtacccac 155  Q
    ||||||| ||||||||||||||||||   ||||||| || ||||| |||| |||| ||||||||||| ||||||| ||| ||| | ||||||||||||    
T  10415 tttgacgggttttttccgttttgactaggtttgggtatgggtttt-cccgctttccaaacacgggtatgggacggataacaggtatataggtacccac 10319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 73 - 194
Target Start/End: Complemental strand, 90701 - 90580
Alignment:
Q  73 ccgttttgactgaatttgggtttgagtttttcccgatttcaaaacacgggtacgggacgggtaatagggagataggtacccaccccaaactcgtactcaa 172  Q
    ||||||||||||  ||||||| || ||||| ||||||||||||||||||||| | ||||| |||  || | || ||||||| |||| ||| | ||| |||    
T  90701 ccgttttgactgggtttgggtatgggttttccccgatttcaaaacacgggtatgagacggttaacgggtatattggtaccctccccgaacccatacacaa 90602  T
Q  173 actcgtccggaatgtagaaaat 194  Q
    | |||||| ||||| |||||||    
T  90601 attcgtcctgaatgcagaaaat 90580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0184 (Bit Score: 37; Significance: 0.000000000008; HSPs: 1)
Name: scaffold0184
Description:

Target: scaffold0184; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 92 - 192
Target Start/End: Complemental strand, 3054 - 2954
Alignment:
Q  92 gtttgagtttttcccgatttcaaaacacgggtacgggacgggtaatagggagataggtacccaccccaaactcgtactcaaactcgtccggaatgtagaa 191  Q
    ||||| ||||| ||||||||||||| |||||||| |||||| |||  |||| ||| ||||||||||| ||| | ||||||||| |  || ||||||||||    
T  3054 gtttgggttttccccgatttcaaaatacgggtacaggacggataactgggatatatgtacccaccccgaacccatactcaaaccctacccgaatgtagaa 2955  T
Q  192 a 192  Q
    |    
T  2954 a 2954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013 (Bit Score: 35; Significance: 0.0000000001; HSPs: 2)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 92 - 158
Target Start/End: Original strand, 128124 - 128190
Alignment:
Q  92 gtttgagtttttcccgatttcaaaacacgggtacgggacgggtaatagggagataggtacccacccc 158  Q
    ||||| |||||| || |||||| || |||||||||||||||||||| |||| ||| |||||||||||    
T  128124 gtttgggttttttccaatttcataatacgggtacgggacgggtaatggggatatatgtacccacccc 128190  T

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Target: scaffold0013; HSP #2
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 99 - 158
Target Start/End: Original strand, 105479 - 105538
Alignment:
Q  99 tttttcccgatttcaaaacacgggtacgggacgggtaatagggagataggtacccacccc 158  Q
    ||||| ||||||||  || ||||||||||||||||||| ||||| ||| |||||||||||    
T  105479 ttttttccgatttcttaatacgggtacgggacgggtaacagggatatatgtacccacccc 105538  T

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Target: scaffold0157 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0157
Description:

Target: scaffold0157; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 129 - 226
Target Start/End: Complemental strand, 14906 - 14809
Alignment:
Q  129 acgggtaatagggagataggtacccaccccaaactcgtactcaaactcgtccggaatgtagaaaatcaatttattactcattttatataaatagaaac 226  Q
    ||||||||| |||| ||  ||||||||||  ||||| ||| ||||| ||||| ||| ||| || ||||||||||| | | ||||||||||||||||||    
T  14906 acgggtaatggggatattagtacccaccctgaactcatacccaaacccgtcctgaaggtaaaacatcaatttatttccccttttatataaatagaaac 14809  T

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Target: scaffold0059 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0059
Description:

Target: scaffold0059; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 99 - 162
Target Start/End: Complemental strand, 70173 - 70110
Alignment:
Q  99 tttttcccgatttcaaaacacgggtacgggacgggtaatagggagataggtacccaccccaaac 162  Q
    ||||||| ||||||| || |||||||||||||||||||   ||| ||| |||||||||||||||    
T  70173 tttttcctgatttcataatacgggtacgggacgggtaacgaggatatatgtacccaccccaaac 70110  T

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Target: scaffold0182 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0182
Description:

Target: scaffold0182; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 94 - 164
Target Start/End: Complemental strand, 17050 - 16980
Alignment:
Q  94 ttgagtttttcccgatttcaaaacacgggtacgggacgggtaatagggagataggtacccaccccaaactc 164  Q
    ||||| ||||||||||||||||| ||| ||| ||||||||| |  |||| ||| ||||||||||| |||||    
T  17050 ttgagcttttcccgatttcaaaatacgtgtatgggacgggtgacggggatatatgtacccaccccgaactc 16980  T

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