View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15397_low_9 (Length: 225)
Name: NF15397_low_9
Description: NF15397
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15397_low_9 |
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Alignment Details
Target: chr4 (Bit Score: 169; Significance: 9e-91; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 169; E-Value: 9e-91
Query Start/End: Original strand, 21 - 193
Target Start/End: Original strand, 42974059 - 42974231
Alignment:
| Q |
21 |
gcagcatccgccggaagaaaaccatttcttcaccaaaacaaactcatccggtgccggtaactcctcctttactgccggaaactccggcaaaagagcaaac |
120 |
Q |
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| T |
42974059 |
gcagcatccgccggaagaaaaccatttcttcaccaaaacaaactcatccggtgccggtaactcttcctttactgccggaaactccggcaaaagagcaaac |
42974158 |
T |
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| Q |
121 |
cctaacggaagtaaataatacaaatcagtggctgagtttcaagagttgtagcaaagtagaagctgaaccatac |
193 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
42974159 |
cctaacggaagtaaataatacaaatcagtggctgagtttcaagagttgtagcaaagtagaagctgaaccatac |
42974231 |
T |
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