View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF15398_low_6 (Length: 337)

Name: NF15398_low_6
Description: NF15398
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF15398_low_6
NF15398_low_6
[»] chr1 (28 HSPs)
chr1 (232-318)||(25983370-25983457)
chr1 (1-88)||(25983612-25983697)
chr1 (4-59)||(29225795-29225850)
chr1 (4-88)||(2571405-2571490)
chr1 (4-78)||(34813959-34814034)
chr1 (7-81)||(25819335-25819409)
chr1 (4-80)||(19348985-19349060)
chr1 (4-79)||(45305895-45305970)
chr1 (4-88)||(49662738-49662822)
chr1 (4-78)||(3718840-3718915)
chr1 (4-88)||(21304786-21304872)
chr1 (11-84)||(27831895-27831969)
chr1 (4-70)||(35622779-35622845)
chr1 (4-65)||(30903232-30903293)
chr1 (4-88)||(31798460-31798545)
chr1 (4-53)||(37281014-37281063)
chr1 (4-88)||(44580558-44580643)
chr1 (4-78)||(16040119-16040194)
chr1 (4-76)||(25842641-25842713)
chr1 (4-54)||(27932849-27932899)
chr1 (4-55)||(37925261-37925312)
chr1 (1-78)||(39420623-39420703)
chr1 (11-79)||(49944981-49945050)
chr1 (4-53)||(50926789-50926838)
chr1 (4-53)||(29225425-29225474)
chr1 (4-78)||(11425860-11425935)
chr1 (4-88)||(27391389-27391476)
chr1 (4-71)||(34877088-34877156)
[»] chr8 (20 HSPs)
chr8 (4-88)||(2195510-2195596)
chr8 (4-71)||(10728920-10728987)
chr8 (4-76)||(7258359-7258432)
chr8 (4-88)||(14690002-14690089)
chr8 (4-64)||(15559134-15559195)
chr8 (4-44)||(15020714-15020754)
chr8 (4-71)||(27868322-27868390)
chr8 (4-78)||(5878217-5878291)
chr8 (5-71)||(27973683-27973750)
chr8 (5-71)||(28030952-28031019)
chr8 (4-87)||(2797082-2797167)
chr8 (4-88)||(26677115-26677203)
chr8 (4-53)||(40077766-40077815)
chr8 (4-88)||(42412361-42412448)
chr8 (4-53)||(44225937-44225986)
chr8 (4-48)||(1230384-1230427)
chr8 (4-78)||(5392091-5392166)
chr8 (4-88)||(29451391-29451475)
chr8 (4-78)||(29730886-29730961)
chr8 (31-88)||(36011972-36012031)
[»] chr5 (18 HSPs)
chr5 (4-88)||(35988676-35988762)
chr5 (4-47)||(72128-72171)
chr5 (4-88)||(39212534-39212617)
chr5 (11-88)||(6629375-6629451)
chr5 (4-85)||(25111132-25111214)
chr5 (4-85)||(25170223-25170305)
chr5 (4-80)||(7311169-7311246)
chr5 (4-89)||(22982986-22983072)
chr5 (4-80)||(36006882-36006958)
chr5 (4-71)||(5072992-5073059)
chr5 (5-64)||(18319960-18320019)
chr5 (4-85)||(25108615-25108697)
chr5 (4-85)||(25167707-25167789)
chr5 (4-89)||(5147474-5147562)
chr5 (4-88)||(16926070-16926157)
chr5 (2-55)||(33498509-33498562)
chr5 (4-78)||(5357808-5357883)
chr5 (4-78)||(8369687-8369762)
[»] chr4 (15 HSPs)
chr4 (4-88)||(46958764-46958848)
chr4 (4-71)||(38614961-38615028)
chr4 (4-59)||(18872662-18872717)
chr4 (31-76)||(38838690-38838735)
chr4 (4-71)||(21954427-21954495)
chr4 (4-88)||(49448883-49448970)
chr4 (11-64)||(35027502-35027555)
chr4 (7-78)||(13529907-13529978)
chr4 (4-88)||(29990451-29990537)
chr4 (4-71)||(47386219-47386286)
chr4 (11-88)||(38310338-38310416)
chr4 (4-88)||(5499411-5499494)
chr4 (4-53)||(22020527-22020575)
chr4 (4-79)||(22872375-22872453)
chr4 (1-45)||(37315946-37315990)
[»] chr3 (15 HSPs)
chr3 (4-88)||(9218187-9218273)
chr3 (4-88)||(39329729-39329815)
chr3 (4-78)||(30261492-30261566)
chr3 (4-64)||(31650953-31651013)
chr3 (4-71)||(42547104-42547171)
chr3 (1-78)||(48409623-48409701)
chr3 (4-55)||(21296517-21296568)
chr3 (4-69)||(8764380-8764445)
chr3 (4-65)||(8769282-8769343)
chr3 (4-57)||(45746408-45746461)
chr3 (4-76)||(44219027-44219098)
chr3 (5-85)||(45267205-45267285)
chr3 (34-85)||(47684814-47684866)
chr3 (4-78)||(51164994-51165069)
chr3 (4-71)||(53583558-53583625)
[»] chr7 (19 HSPs)
chr7 (4-78)||(34064257-34064331)
chr7 (4-89)||(37264355-37264441)
chr7 (4-80)||(40023716-40023792)
chr7 (4-59)||(14648929-14648984)
chr7 (4-78)||(28333213-28333287)
chr7 (4-64)||(3667882-3667942)
chr7 (4-71)||(10355732-10355800)
chr7 (4-64)||(11730830-11730889)
chr7 (4-50)||(25778786-25778832)
chr7 (4-65)||(32346560-32346621)
chr7 (4-65)||(37496401-37496462)
chr7 (4-78)||(2849297-2849372)
chr7 (11-88)||(6697130-6697209)
chr7 (4-88)||(8150001-8150087)
chr7 (7-78)||(9658883-9658954)
chr7 (4-88)||(32776025-32776112)
chr7 (4-88)||(32971996-32972083)
chr7 (4-88)||(43007936-43008023)
chr7 (4-78)||(45218148-45218223)
[»] chr6 (6 HSPs)
chr6 (4-65)||(16126253-16126314)
chr6 (4-86)||(20383887-20383971)
chr6 (4-88)||(15371842-15371928)
chr6 (4-78)||(31075915-31075989)
chr6 (4-80)||(15355617-15355693)
chr6 (4-65)||(33017947-33018009)
[»] chr2 (18 HSPs)
chr2 (4-88)||(44424243-44424328)
chr2 (7-88)||(12949943-12950026)
chr2 (4-88)||(25604403-25604488)
chr2 (4-88)||(31592592-31592678)
chr2 (13-76)||(9937070-9937133)
chr2 (4-78)||(19515923-19515996)
chr2 (4-65)||(44024760-44024821)
chr2 (4-79)||(2756716-2756792)
chr2 (4-80)||(29937903-29937979)
chr2 (4-71)||(8385117-8385184)
chr2 (34-88)||(32556244-32556299)
chr2 (4-80)||(40710619-40710695)
chr2 (4-55)||(4794615-4794666)
chr2 (13-64)||(34235094-34235144)
chr2 (4-78)||(5425899-5425973)
chr2 (4-78)||(1908484-1908559)
chr2 (4-88)||(2048334-2048421)
chr2 (4-89)||(10069562-10069650)
[»] scaffold0576 (1 HSPs)
scaffold0576 (4-80)||(607-683)
[»] scaffold0003 (1 HSPs)
scaffold0003 (4-80)||(352449-352526)
[»] scaffold0020 (1 HSPs)
scaffold0020 (4-84)||(171268-171349)


Alignment Details
Target: chr1 (Bit Score: 80; Significance: 2e-37; HSPs: 28)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 232 - 318
Target Start/End: Complemental strand, 25983457 - 25983370
Alignment:
Q  232 gagagagcgtgtttttagttttgtgtctgaaatatgatacgaggttaaaataaattcaaatgaa-aaaaggctcccgcgtgaaagggt 318  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  25983457 gagagagcgtgtttttagttttgtgtctgaaatatgatacgaggttaaaataaattcaaatgaaaaaaaggctcccgcgtgaaagggt 25983370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 25983697 - 25983612
Alignment:
Q  1 aacatattctactttgcatttatgataagaagaaatgcaccaatacttgacaagacacttaaaacaattttactctctttcacttata 88  Q
    ||||||||||| |||||||||||||||| ||  ||||||||||||||| | |||||||||||||||||||||  ||||||||||||||    
T  25983697 aacatattctattttgcatttatgataaaaatgaatgcaccaatacttaataagacacttaaaacaatttta--ctctttcacttata 25983612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 4 - 59
Target Start/End: Original strand, 29225795 - 29225850
Alignment:
Q  4 atattctactttgcatttatgataagaagaaatgcaccaatacttgacaagacact 59  Q
    ||||||||||||||||||||||||||||  ||||||||||||||||||||||||||    
T  29225795 atattctactttgcatttatgataagaatgaatgcaccaatacttgacaagacact 29225850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 4 - 88
Target Start/End: Original strand, 2571405 - 2571490
Alignment:
Q  4 atattctactttgcatttatgataagaagaaatgcaccaatacttgacaagacacttaaaacaatttt-actctctttcacttata 88  Q
    ||||||||||||||||||| ||||||||  ||||||||||||||| |||||||||| ||||| |||||  |||||||||| |||||    
T  2571405 atattctactttgcatttaggataagaaataatgcaccaatacttaacaagacactcaaaactattttctctctctttcatttata 2571490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 4 - 78
Target Start/End: Original strand, 34813959 - 34814034
Alignment:
Q  4 atattctactttgcatttatgataagaagaaatgcaccaatacttgacaag-acacttaaaacaattttactctct 78  Q
    |||||||||||||||||||||||||  | |||||||| ||||||| ||||| ||||||||||| ||||| ||||||    
T  34813959 atattctactttgcatttatgataatgataaatgcactaatacttaacaagaacacttaaaactatttttctctct 34814034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 7 - 81
Target Start/End: Complemental strand, 25819409 - 25819335
Alignment:
Q  7 ttctactttgcatttatgataagaagaaatgcaccaatacttgacaagacacttaaaacaattttactctctttc 81  Q
    ||||||||||||||||||||||| || ||||||||||||  |||||| ||||| ||||  ||||| |||||||||    
T  25819409 ttctactttgcatttatgataaggaggaatgcaccaataaatgacaaaacactcaaaattatttttctctctttc 25819335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 4 - 80
Target Start/End: Complemental strand, 19349060 - 19348985
Alignment:
Q  4 atattctactttgcatttatgataagaagaaatgcaccaatacttgacaagacacttaaaacaattttactctcttt 80  Q
    |||||||| ||||||||||||||||   ||| ||||||||||||||||||||| || ||||||||||| || |||||    
T  19349060 atattctattttgcatttatgataattggaa-tgcaccaatacttgacaagacgctcaaaacaatttttctatcttt 19348985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 4 - 79
Target Start/End: Original strand, 45305895 - 45305970
Alignment:
Q  4 atattctactttgcatttatgataa-gaagaaatgcaccaatacttgacaagacacttaaaacaattttactctctt 79  Q
    ||||||||||||||||||||||||| |||| ||||||  |||||||||||||||||| ||||  ||||| |||||||    
T  45305895 atattctactttgcatttatgataatgaag-aatgcataaatacttgacaagacactcaaaattattttcctctctt 45305970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 4 - 88
Target Start/End: Complemental strand, 49662822 - 49662738
Alignment:
Q  4 atattctactttgcatttatgataagaagaaatgcaccaatacttgacaagacacttaaaacaattttactctctttcacttata 88  Q
    ||||||||||||| ||||||||||| | | ||| ||||||||||||| ||||  || ||||  ||||| ||||||||||||||||    
T  49662822 atattctactttgaatttatgataataggtaatacaccaatacttgagaagatgctcaaaatcatttttctctctttcacttata 49662738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 4 - 78
Target Start/End: Complemental strand, 3718915 - 3718840
Alignment:
Q  4 atattctactttgcatttatgataagaagaaatgcaccaatacttgacaaga-cacttaaaacaattttactctct 78  Q
    ||||| |||||| ||||||||||||  | |||||||| |||||||||||||| |||||||||| ||||| ||||||    
T  3718915 atattatactttacatttatgataatgataaatgcacaaatacttgacaagagcacttaaaactatttttctctct 3718840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 4 - 88
Target Start/End: Complemental strand, 21304872 - 21304786
Alignment:
Q  4 atattctactttgcatttatgataagaagaaatgcaccaatacttgac-aagacacttaaaacaatttta-ctctctttcacttata 88  Q
    ||||| ||||||  |||||||||||  | ||||||| ||||||||||| |||||||| |||||||||||| |||||||||| |||||    
T  21304872 atattatactttatatttatgataaagaaaaatgcatcaatacttgacaaagacactcaaaacaattttatctctctttcatttata 21304786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 11 - 84
Target Start/End: Original strand, 27831895 - 27831969
Alignment:
Q  11 actttgcatttatgataagaagaaatgcaccaatacttgacaa-gacacttaaaacaattttactctctttcact 84  Q
    ||||||||||||||||||     |||||||||||||||||||| | |||||||||| ||||| ||||||||||||    
T  27831895 actttgcatttatgataatggtgaatgcaccaatacttgacaagggcacttaaaactatttttctctctttcact 27831969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 4 - 70
Target Start/End: Complemental strand, 35622845 - 35622779
Alignment:
Q  4 atattctactttgcatttatgataagaagaaatgcaccaatacttgacaagacacttaaaacaattt 70  Q
    |||||||||||||||||||| | |||||| |||||| ||||||| ||||||||| | ||||| ||||    
T  35622845 atattctactttgcatttatcacaagaaggaatgcatcaatactcgacaagacattcaaaactattt 35622779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 4 - 65
Target Start/End: Complemental strand, 30903293 - 30903232
Alignment:
Q  4 atattctactttgcatttatgataagaagaaatgcaccaatacttgacaagacacttaaaac 65  Q
    |||||||||||||||||||||||||    |||||||| ||||||| |||||||||| |||||    
T  30903293 atattctactttgcatttatgataatggaaaatgcacaaatacttaacaagacactcaaaac 30903232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 4 - 88
Target Start/End: Original strand, 31798460 - 31798545
Alignment:
Q  4 atattctactttgcatttatgataagaagaaatgcaccaatacttgacaa-gacacttaaaacaattttactctctttcacttata 88  Q
    |||||||||||||||||||||||||  |  |||||||||||| |||| || | |||| ||||| || || ||||||||||||||||    
T  31798460 atattctactttgcatttatgataaagaataatgcaccaatagttgataagggcactcaaaaccatatttctctctttcacttata 31798545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 4 - 53
Target Start/End: Complemental strand, 37281063 - 37281014
Alignment:
Q  4 atattctactttgcatttatgataagaagaaatgcaccaatacttgacaa 53  Q
    |||||||||||| |||||||||||| ||  ||||||||||||||||||||    
T  37281063 atattctactttacatttatgataaaaaagaatgcaccaatacttgacaa 37281014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 4 - 88
Target Start/End: Original strand, 44580558 - 44580643
Alignment:
Q  4 atattctactttgcatttatgataagaagaaatgcaccaatacttgacaa-gacacttaaaacaattttactctctttcacttata 88  Q
    ||||||||||||||||||||||||| || |||||||| |||| |||| || | ||||  || | ||||| ||||||||||||||||    
T  44580558 atattctactttgcatttatgataaaaaaaaatgcacaaatagttgataaggtcactctaacccatttttctctctttcacttata 44580643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 4 - 78
Target Start/End: Original strand, 16040119 - 16040194
Alignment:
Q  4 atattctactttgcatttatgat-aagaagaaatgcaccaatacttgac-aagacacttaaaacaattttactctct 78  Q
    |||||||||||| |||||||||| |||||| |||| |||||||||| || |||||||||||||| ||||| ||||||    
T  16040119 atattctactttacatttatgataaagaag-aatgaaccaatacttaacaaagacacttaaaaccatttttctctct 16040194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 4 - 76
Target Start/End: Original strand, 25842641 - 25842713
Alignment:
Q  4 atattctactttgcatttatgataagaagaaatgcaccaatacttgacaagacacttaaaacaattttactct 76  Q
    |||||||||||| |||||||||||| |  ||||| |||||||||| | |||||||| ||||| ||||| ||||    
T  25842641 atattctactttacatttatgataatagaaaatgtaccaatacttaataagacactcaaaactatttttctct 25842713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 4 - 54
Target Start/End: Complemental strand, 27932899 - 27932849
Alignment:
Q  4 atattctactttgcatttatgataa-gaagaaatgcaccaatacttgacaag 54  Q
    ||||||||||||||||||||||||| |||||| |||||||||| ||||||||    
T  27932899 atattctactttgcatttatgataaagaagaa-tgcaccaatagttgacaag 27932849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 4 - 55
Target Start/End: Complemental strand, 37925312 - 37925261
Alignment:
Q  4 atattctactttgcatttatgataagaagaaatgcaccaatacttgacaaga 55  Q
    |||||||||||||||||||||||||  | ||||||||||||| |||| ||||    
T  37925312 atattctactttgcatttatgataaagaaaaatgcaccaataattgataaga 37925261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 39420623 - 39420703
Alignment:
Q  1 aacatattctactttgcatttatgataagaagaaa---tgcaccaatacttgacaagacacttaaaacaattttactctct 78  Q
    ||||| || |||||||||||||| |||| || |||   |||||||||||||||||||||||| ||||  ||||| ||||||    
T  39420623 aacatgttttactttgcatttataataaaaaaaaacaatgcaccaatacttgacaagacactcaaaattatttttctctct 39420703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 11 - 79
Target Start/End: Original strand, 49944981 - 49945050
Alignment:
Q  11 actttgcatttatgata-agaagaaatgcaccaatacttgacaaga-cacttaaaacaattttactctctt 79  Q
    ||||||||||||||||| ||||| ||||||| ||||||| |||||| |||||||||| ||||| |||||||    
T  49944981 actttgcatttatgatagagaag-aatgcacaaatacttaacaagagcacttaaaaccatttttctctctt 49945050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 4 - 53
Target Start/End: Original strand, 50926789 - 50926838
Alignment:
Q  4 atattctactttgcatttatgat-aagaagaaatgcaccaatacttgacaa 53  Q
    |||||||||||| |||||||||| |||||| ||||||||||||||||||||    
T  50926789 atattctactttacatttatgataaagaag-aatgcaccaatacttgacaa 50926838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 53
Target Start/End: Complemental strand, 29225474 - 29225425
Alignment:
Q  4 atattctactttgcatttatgataagaagaaatgcaccaatacttgacaa 53  Q
    |||||||||||| |||||||||||| ||  ||||||||||||||| ||||    
T  29225474 atattctactttccatttatgataaaaaagaatgcaccaatacttaacaa 29225425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 4 - 78
Target Start/End: Complemental strand, 11425935 - 11425860
Alignment:
Q  4 atattctactttgcatttatgat-aagaagaaatgcaccaatacttgac-aagacacttaaaacaattttactctct 78  Q
    |||||||||||| |||||||||| |||||| |||| |||||||||| || |||||||| ||||| ||||| ||||||    
T  11425935 atattctactttacatttatgataaagaag-aatggaccaatacttaacaaagacactcaaaactatttttctctct 11425860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 4 - 88
Target Start/End: Original strand, 27391389 - 27391476
Alignment:
Q  4 atattctactttgcatttatgataagaagaaatgcaccaatacttgacaaga-cacttaaaacaattttactctct--ttcacttata 88  Q
    |||||| |||||||||||||||||| |  ||||| |||||||||| | |||| |||||||||  ||||| ||||||  ||||||||||    
T  27391389 atattccactttgcatttatgataatagtaaatgaaccaatacttaataagagcacttaaaatcatttttctctctccttcacttata 27391476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 4 - 71
Target Start/End: Complemental strand, 34877156 - 34877088
Alignment:
Q  4 atattctactttgcatttatgataagaagaaatgcaccaatacttgacaaga-cacttaaaacaatttt 71  Q
    |||||| |||||||||||||||||| |  |||||||| |||| || || ||| ||||||||||||||||    
T  34877156 atattcaactttgcatttatgataatagaaaatgcacgaatatttaaccagagcacttaaaacaatttt 34877088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 52; Significance: 9e-21; HSPs: 20)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 4 - 88
Target Start/End: Original strand, 2195510 - 2195596
Alignment:
Q  4 atattctactttgcatttatgataagaagaaatgcaccaatacttgacaagacacttaaaacaatttt--actctctttcacttata 88  Q
    ||||||||||||||||||||||||||||  ||||||||||||||| |||||||||| ||||| |||||   ||||||||||||||||    
T  2195510 atattctactttgcatttatgataagaaagaatgcaccaatacttaacaagacactcaaaactatttttctctctctttcacttata 2195596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 4 - 71
Target Start/End: Complemental strand, 10728987 - 10728920
Alignment:
Q  4 atattctactttgcatttatgataagaagaaatgcaccaatacttgacaagacacttaaaacaatttt 71  Q
    |||||| |||||||||||||||||||||  ||||||| ||||||| |||||||||| ||||| |||||    
T  10728987 atattccactttgcatttatgataagaaagaatgcacaaatacttaacaagacactcaaaactatttt 10728920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 4 - 76
Target Start/End: Complemental strand, 7258432 - 7258359
Alignment:
Q  4 atattctactttgcatttatgataagaagaaatgcaccaatacttgacaaga-cacttaaaacaattttactct 76  Q
    |||||||| ||||||||||||||||  | ||||||||||||||||||||||| | |||||||| ||||| ||||    
T  7258432 atattctagtttgcatttatgataatgataaatgcaccaatacttgacaagagcgcttaaaaccatttttctct 7258359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 4 - 88
Target Start/End: Original strand, 14690002 - 14690089
Alignment:
Q  4 atattctactttgcatttatgataagaagaaatgcaccaatacttgacaa-gacacttaaaacaatttt--actctctttcacttata 88  Q
    ||||||||||||||||||||||||| ||  |||||||||||| |||| || |||||| ||||| |||||   ||||||||||||||||    
T  14690002 atattctactttgcatttatgataaaaaagaatgcaccaatagttgataaggacactcaaaaccatttttctctctctttcacttata 14690089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 4 - 64
Target Start/End: Complemental strand, 15559195 - 15559134
Alignment:
Q  4 atattctactttgcatttatgataagaagaaatgcaccaatacttgacaag-acacttaaaa 64  Q
    |||||||||||||||||||||||||    |||| ||||||||||||||||| ||||||||||    
T  15559195 atattctactttgcatttatgataatggtaaatacaccaatacttgacaagaacacttaaaa 15559134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 4 - 44
Target Start/End: Original strand, 15020714 - 15020754
Alignment:
Q  4 atattctactttgcatttatgataagaagaaatgcaccaat 44  Q
    |||||||||||||||| |||||||||||| |||||||||||    
T  15020714 atattctactttgcatgtatgataagaaggaatgcaccaat 15020754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 4 - 71
Target Start/End: Complemental strand, 27868390 - 27868322
Alignment:
Q  4 atattctactttgcatttatgataagaagaaatgcaccaatacttgacaag-acacttaaaacaatttt 71  Q
    |||||||||||||||||||||||||  | ||||| | |||||||||||||| |||| |||||| |||||    
T  27868390 atattctactttgcatttatgataatgataaatggatcaatacttgacaagaacacgtaaaaccatttt 27868322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 4 - 78
Target Start/End: Complemental strand, 5878291 - 5878217
Alignment:
Q  4 atattctactttgcatttatgataagaagaaatgcaccaatacttgac-aagacacttaaaacaattttactctct 78  Q
    |||||||||||| ||||||||||||| || |||| || |||||||||| |||||| ||||||| ||||| ||||||    
T  5878291 atattctactttacatttatgataagtag-aatgaactaatacttgacaaagacatttaaaaccatttttctctct 5878217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 5 - 71
Target Start/End: Complemental strand, 27973750 - 27973683
Alignment:
Q  5 tattctactttgcatttatgataagaagaaatgcaccaatacttgacaag-acacttaaaacaatttt 71  Q
    ||||||||||||||||||||||||    ||||| | |||||||||||||| ||||||||||| |||||    
T  27973750 tattctactttgcatttatgataatggtaaatggatcaatacttgacaagaacacttaaaaccatttt 27973683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 5 - 71
Target Start/End: Complemental strand, 28031019 - 28030952
Alignment:
Q  5 tattctactttgcatttatgataagaagaaatgcaccaatacttgacaag-acacttaaaacaatttt 71  Q
    ||||||||||||||||||||||||    ||||| | |||||||||||||| ||||||||||| |||||    
T  28031019 tattctactttgcatttatgataatggtaaatggatcaatacttgacaagaacacttaaaaccatttt 28030952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 4 - 87
Target Start/End: Original strand, 2797082 - 2797167
Alignment:
Q  4 atattctactttgcatttatgataagaagaaatgcaccaatacttgacaagacacttaaaacaattttactc--tctttcacttat 87  Q
    |||||||||||||||||||||||||| |  |||||| || ||  |||||| ||||| ||||| ||||| |||  ||||||||||||    
T  2797082 atattctactttgcatttatgataagtaagaatgcatcagtaaatgacaaaacactcaaaaccatttttctctttctttcacttat 2797167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 4 - 88
Target Start/End: Original strand, 26677115 - 26677203
Alignment:
Q  4 atattctactttgcatttatgataagaagaaatgcaccaatacttgacaa-gacacttaaaacaa---ttttactctctttcacttata 88  Q
    |||||||||||||||||||||||||     |||||||||||| || |||| ||||||||||||||   |||  ||||||||||||||||    
T  26677115 atattctactttgcatttatgataatggtgaatgcaccaatattttacaatgacacttaaaacaaatttttctctctctttcacttata 26677203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 4 - 53
Target Start/End: Complemental strand, 40077815 - 40077766
Alignment:
Q  4 atattctactttgcatttatgataa-gaagaaatgcaccaatacttgacaa 53  Q
    |||||||||||| |||||||||||| |||||| ||||||||||||||||||    
T  40077815 atattctactttacatttatgataaagaagaa-tgcaccaatacttgacaa 40077766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 88
Target Start/End: Complemental strand, 42412448 - 42412361
Alignment:
Q  4 atattctactttgcatttatgataa-gaagaaatgcaccaatacttgacaaga-cacttaaaacaattttactctct--ttcacttata 88  Q
    |||||| |||||||||||||||||| | || ||||||||||||  |||||||| |||||||||| ||||| ||||||  ||||||||||    
T  42412448 atattccactttgcatttatgataatggag-aatgcaccaatatatgacaagagcacttaaaactatttttctctctcattcacttata 42412361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 53
Target Start/End: Complemental strand, 44225986 - 44225937
Alignment:
Q  4 atattctactttgcatttatgataagaagaaatgcaccaatacttgacaa 53  Q
    ||||||||||||||||||||||| | ||  ||||||||||||||| ||||    
T  44225986 atattctactttgcatttatgatgaaaatgaatgcaccaatacttaacaa 44225937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 4 - 48
Target Start/End: Complemental strand, 1230427 - 1230384
Alignment:
Q  4 atattctactttgcatttatgataagaagaaatgcaccaatactt 48  Q
    |||||||||||||||||||||||||   |||||||||||||||||    
T  1230427 atattctactttgcatttatgataa-tggaaatgcaccaatactt 1230384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 4 - 78
Target Start/End: Original strand, 5392091 - 5392166
Alignment:
Q  4 atattctactttgcatttatgata-agaagaaatgcaccaatacttgacaaga-cacttaaaacaattttactctct 78  Q
    |||||| |||||||||||||||||  | || |||||||||||||||||||| | |||||||||| ||||| ||||||    
T  5392091 atattccactttgcatttatgatagtggag-aatgcaccaatacttgacaaaagcacttaaaaccatttttctctct 5392166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 4 - 88
Target Start/End: Original strand, 29451391 - 29451475
Alignment:
Q  4 atattctactttgcatttatgataagaagaaatgcaccaatacttgacaagacacttaaaacaattttactctctttcacttata 88  Q
    ||||| ||||||| ||||||||||||||  ||| ||| |||||||||||| |   | ||||| ||||| |||||||||| |||||    
T  29451391 atattatactttggatttatgataagaaagaatacactaatacttgacaaaatgttcaaaactatttttctctctttcatttata 29451475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 4 - 78
Target Start/End: Complemental strand, 29730961 - 29730886
Alignment:
Q  4 atattctactttgcatttatgata-agaagaaatgcaccaatacttgacaag-acacttaaaacaattttactctct 78  Q
    ||||||||||||||||||||||||  | || ||||||||||||||| ||||| ||||||||||| | ||| ||||||    
T  29730961 atattctactttgcatttatgatagtggag-aatgcaccaatacttaacaagaacacttaaaaccacttttctctct 29730886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 31 - 88
Target Start/End: Complemental strand, 36012031 - 36011972
Alignment:
Q  31 agaaatgcaccaatacttgacaagacacttaaaacaattttac--tctctttcacttata 88  Q
    ||||||||| ||||||||||||||||||| ||||| ||||  |  |||||||||||||||    
T  36012031 agaaatgcatcaatacttgacaagacactcaaaaccatttctctttctctttcacttata 36011972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 52; Significance: 9e-21; HSPs: 18)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 4 - 88
Target Start/End: Original strand, 35988676 - 35988762
Alignment:
Q  4 atattctactttgcatttatgataagaagaaatgcaccaatacttgacaagacacttaaaacaattttactctc--tttcacttata 88  Q
    |||||| |||||||||||||||||||||  |||||||||||||||||||| ||||||||||| ||||| |||||  |||||||||||    
T  35988676 atattcaactttgcatttatgataagaatgaatgcaccaatacttgacaacacacttaaaactatttttctctctgtttcacttata 35988762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 4 - 47
Target Start/End: Complemental strand, 72171 - 72128
Alignment:
Q  4 atattctactttgcatttatgataagaagaaatgcaccaatact 47  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  72171 atattctactttgcatttatgataagaagaaatgcaccaatact 72128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 4 - 88
Target Start/End: Complemental strand, 39212617 - 39212534
Alignment:
Q  4 atattctactttgcatttatgataa-gaagaaatgcaccaatacttgacaagacacttaaaacaattttactctctttcacttata 88  Q
    ||||||||||||||||||||||||| |  | ||||||||||||||||||||| ||||   ||||||||| ||||||||||||||||    
T  39212617 atattctactttgcatttatgataatgggggaatgcaccaatacttgacaaggcact--caacaatttttctctctttcacttata 39212534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 11 - 88
Target Start/End: Complemental strand, 6629451 - 6629375
Alignment:
Q  11 actttgcatttatgataagaagaaatgcaccaatacttgacaagacacttaaaacaattttactctctttcacttata 88  Q
    ||||||||||||| |||| ||  |||||||||||||||||||||||||| ||||| ||||| |||||||||| |||||    
T  6629451 actttgcatttataataaaaaagaatgcaccaatacttgacaagacactcaaaactatttt-ctctctttcatttata 6629375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 4 - 85
Target Start/End: Complemental strand, 25111214 - 25111132
Alignment:
Q  4 atattctactttgcatttatgataa-gaagaaatgcaccaatacttgac-aagacacttaaaacaattttactctctttcactt 85  Q
    |||||||||||| |||||||||||| |||||| |||| ||||||||||| |||||||| ||||| ||||| |||||||||||||    
T  25111214 atattctactttacatttatgataaagaagaa-tgcagcaatacttgacaaagacactcaaaactatttttctctctttcactt 25111132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 4 - 85
Target Start/End: Complemental strand, 25170305 - 25170223
Alignment:
Q  4 atattctactttgcatttatgataa-gaagaaatgcaccaatacttgac-aagacacttaaaacaattttactctctttcactt 85  Q
    |||||||||||| |||||||||||| |||||| |||| ||||||||||| |||||||| ||||| ||||| |||||||||||||    
T  25170305 atattctactttacatttatgataaagaagaa-tgcagcaatacttgacaaagacactcaaaactatttttctctctttcactt 25170223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 4 - 80
Target Start/End: Complemental strand, 7311246 - 7311169
Alignment:
Q  4 atattctactttgcatttatgataagaagaaatgcaccaatacttgacaaga-cacttaaaacaattttactctcttt 80  Q
    |||||||||||||||||||||||||    |||||||| ||||||||| |||| |||||||||| ||||| ||||||||    
T  7311246 atattctactttgcatttatgataatggtaaatgcacaaatacttgataagagcacttaaaaccatttttctctcttt 7311169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 4 - 89
Target Start/End: Original strand, 22982986 - 22983072
Alignment:
Q  4 atattctactttgcatttatgataagaagaaatgcaccaatacttgacaagacac-ttaaaacaattttactctctttcacttatat 89  Q
    ||||| |||||||||||||||||||| || ||||||| ||||||||| ||||| | |||||| | |||  |||||||||| ||||||    
T  22982986 atattttactttgcatttatgataagcaggaatgcactaatacttgaaaagactctttaaaatattttccctctctttcatttatat 22983072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 4 - 80
Target Start/End: Complemental strand, 36006958 - 36006882
Alignment:
Q  4 atattctactttgcatttatgataa-gaagaaatgcaccaatacttgac-aagacacttaaaacaattttactctcttt 80  Q
    |||||||||||| |||||||||||| |||||| ||||| |||||||||| |||||||||||||| ||||| ||||||||    
T  36006958 atattctactttacatttatgataaagaagaa-tgcacaaatacttgacaaagacacttaaaaccatttt-ctctcttt 36006882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 4 - 71
Target Start/End: Original strand, 5072992 - 5073059
Alignment:
Q  4 atattctactttgcatttatgataagaagaaatgcaccaatacttgacaagacacttaaaacaatttt 71  Q
    ||||| |||||| ||||||||||||||| |||||||| |||| || | |||||||| ||||| |||||    
T  5072992 atattttactttacatttatgataagaaaaaatgcacaaatatttaataagacactcaaaactatttt 5073059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 5 - 64
Target Start/End: Original strand, 18319960 - 18320019
Alignment:
Q  5 tattctactttgcatttatgataagaagaaatgcaccaatacttgacaagacacttaaaa 64  Q
    ||||||||||||||||||| |||| |  |||||||| ||||||||| |||||||| ||||    
T  18319960 tattctactttgcatttataataatagaaaatgcactaatacttgataagacactcaaaa 18320019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 4 - 85
Target Start/End: Original strand, 25108615 - 25108697
Alignment:
Q  4 atattctactttgcatttatgataa-gaagaaatgcaccaatacttgacaa-gacacttaaaacaattttactctctttcactt 85  Q
    ||||| |||||| |||||||||||| |||||| |||| |||||||| |||| |||||| ||||| ||||| |||||||||||||    
T  25108615 atattatactttacatttatgataaagaagaa-tgcagcaatacttaacaaagacactcaaaactatttttctctctttcactt 25108697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 4 - 85
Target Start/End: Original strand, 25167707 - 25167789
Alignment:
Q  4 atattctactttgcatttatgataa-gaagaaatgcaccaatacttgacaa-gacacttaaaacaattttactctctttcactt 85  Q
    ||||| |||||| |||||||||||| |||||| |||| |||||||| |||| |||||| ||||| ||||| |||||||||||||    
T  25167707 atattatactttacatttatgataaagaagaa-tgcagcaatacttaacaaagacactcaaaactatttttctctctttcactt 25167789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 4 - 89
Target Start/End: Complemental strand, 5147562 - 5147474
Alignment:
Q  4 atattctactttgcatttatgataa-gaagaaatgcaccaatacttgacaa-gacacttaaaacaattttactc--tctttcacttatat 89  Q
    ||||||||||||||||||||||||| |||||| |||||||||| |||| || |||||| ||||  ||||| |||  ||||||||||||||    
T  5147562 atattctactttgcatttatgataaagaagaa-tgcaccaatagttgataaggacactcaaaatcatttttctctttctttcacttatat 5147474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 88
Target Start/End: Complemental strand, 16926157 - 16926070
Alignment:
Q  4 atattctactttgcatttatgataa-gaagaaatgcaccaatacttgac-aagacacttaaaacaattttact--ctctttcacttata 88  Q
    |||||||||||| |||||||||||| |||||| ||||||||||||| || ||| |||| ||||| ||||| ||  ||||||||||||||    
T  16926157 atattctactttccatttatgataaagaagaa-tgcaccaatacttaacgaaggcactcaaaaccatttttctcactctttcacttata 16926070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 2 - 55
Target Start/End: Complemental strand, 33498562 - 33498509
Alignment:
Q  2 acatattctactttgcatttatgataagaagaaatgcaccaatacttgacaaga 55  Q
    ||||||||||||||||||||||| |||    ||||||| |||||||||||||||    
T  33498562 acatattctactttgcatttatgttaatggtaaatgcagcaatacttgacaaga 33498509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 4 - 78
Target Start/End: Complemental strand, 5357883 - 5357808
Alignment:
Q  4 atattctactttgcatttatgat-aagaagaaatgcaccaatacttgac-aagacacttaaaacaattttactctct 78  Q
    |||||||||||| |||||||||| |||||| |||| |||||||||| || |||||||| ||||| ||||| ||||||    
T  5357883 atattctactttacatttatgataaagaag-aatgaaccaatacttaacaaagacactcaaaaccatttttctctct 5357808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 4 - 78
Target Start/End: Complemental strand, 8369762 - 8369687
Alignment:
Q  4 atattctactttgcatttatgata-agaagaaatgcaccaatacttgacaaga-cacttaaaacaattttactctct 78  Q
    |||||| |||||||||||||||||  | || ||||||||||||||| |||||| || ||||||||||||| ||||||    
T  8369762 atattccactttgcatttatgatagtggag-aatgcaccaatacttaacaagagcatttaaaacaatttttctctct 8369687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 49; Significance: 5e-19; HSPs: 15)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 4 - 88
Target Start/End: Original strand, 46958764 - 46958848
Alignment:
Q  4 atattctactttgcatttatgataagaagaaatgcaccaatacttgacaagacacttaaaacaattttactctctttcacttata 88  Q
    |||||||||||||| |||||||||||||| |||||||| |||||| |||||||||| ||||| ||||  || |||||||||||||    
T  46958764 atattctactttgcgtttatgataagaaggaatgcaccgatacttaacaagacactcaaaactatttctctatctttcacttata 46958848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 4 - 71
Target Start/End: Complemental strand, 38615028 - 38614961
Alignment:
Q  4 atattctactttgcatttatgataagaagaaatgcaccaatacttgacaagacacttaaaacaatttt 71  Q
    ||||| || ||||||||||||||||||| |||||||||||||||| |||||||||| ||||| |||||    
T  38615028 atattttattttgcatttatgataagaaaaaatgcaccaatacttaacaagacactcaaaactatttt 38614961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 4 - 59
Target Start/End: Complemental strand, 18872717 - 18872662
Alignment:
Q  4 atattctactttgcatttatgataagaagaaatgcaccaatacttgacaagacact 59  Q
    |||||||| ||||||||||||||||| ||||||||| |||||||||| ||||||||    
T  18872717 atattctattttgcatttatgataaggagaaatgcatcaatacttgataagacact 18872662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 31 - 76
Target Start/End: Original strand, 38838690 - 38838735
Alignment:
Q  31 agaaatgcaccaatacttgacaagacacttaaaacaattttactct 76  Q
    ||||||||||||||||||||||| ||||||||||||||||| ||||    
T  38838690 agaaatgcaccaatacttgacaacacacttaaaacaatttttctct 38838735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 4 - 71
Target Start/End: Complemental strand, 21954495 - 21954427
Alignment:
Q  4 atattctactttgcatttatgataagaagaaatgcaccaatacttgac-aagacacttaaaacaatttt 71  Q
    ||||| |||||| ||||||||||||||||||||||| |||||| |||| ||||||||||| ||| ||||    
T  21954495 atattttactttacatttatgataagaagaaatgcatcaatacatgacaaagacacttaagacattttt 21954427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 4 - 88
Target Start/End: Original strand, 49448883 - 49448970
Alignment:
Q  4 atattctactttgcatttatgataagaagaaatgcaccaatacttgacaaga-cacttaaaacaattttactctct--ttcacttata 88  Q
    ||||| ||||||||||||||||||| |   ||||||| |||||||||||||| |||||||||| ||||| ||||||  ||||||||||    
T  49448883 atattatactttgcatttatgataatagagaatgcacaaatacttgacaagagcacttaaaaccatttttctctctccttcacttata 49448970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 11 - 64
Target Start/End: Complemental strand, 35027555 - 35027502
Alignment:
Q  11 actttgcatttatgataagaagaaatgcaccaatacttgacaagacacttaaaa 64  Q
    ||||||| |||||||||| || ||||||||||||| ||||||||||| ||||||    
T  35027555 actttgcgtttatgataataataaatgcaccaatatttgacaagacatttaaaa 35027502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 7 - 78
Target Start/End: Original strand, 13529907 - 13529978
Alignment:
Q  7 ttctactttgcatttatgataagaagaaatgcaccaatacttgacaagacacttaaaacaattttactctct 78  Q
    ||||||||| ||||||| |||||   ||||||||||||| || |||||||||| ||||| ||||| ||||||    
T  13529907 ttctactttacatttatcataagggaaaatgcaccaatagttcacaagacactcaaaaccatttttctctct 13529978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 4 - 88
Target Start/End: Complemental strand, 29990537 - 29990451
Alignment:
Q  4 atattctactttgcatttatgataagaagaaatgcaccaatacttgacaagacacttaaaacaa--ttttactctctttcacttata 88  Q
    |||||| |||||  |||||||||| |||  |||||| ||||||||||||||||||| ||| | |  |||| ||||||||||||||||    
T  29990537 atattcaactttatatttatgatatgaaagaatgcatcaatacttgacaagacactcaaatctatttttttctctctttcacttata 29990451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 4 - 71
Target Start/End: Complemental strand, 47386286 - 47386219
Alignment:
Q  4 atattctactttgcatttatgataagaagaaatgcaccaatacttgacaagacacttaaaacaatttt 71  Q
    |||||||||||||||||||||||||| || ||  ||||||||  ||| |||||||| ||||| |||||    
T  47386286 atattctactttgcatttatgataaggaggaacacaccaataagtgataagacactcaaaactatttt 47386219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 11 - 88
Target Start/End: Complemental strand, 38310416 - 38310338
Alignment:
Q  11 actttgcatttatgataagaagaaatgcaccaatacttgacaa-gacacttaaaacaattttactctctttcacttata 88  Q
    |||||||||||||||| |  |  |||||||||||| ||||||| || ||||||||  ||||| ||||||||||||||||    
T  38310416 actttgcatttatgatcatgatgaatgcaccaataattgacaatgaaacttaaaatcatttttctctctttcacttata 38310338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 88
Target Start/End: Complemental strand, 5499494 - 5499411
Alignment:
Q  4 atattctactttgcatttatgataagaagaaatgcaccaatacttgacaagacacttaaaacaattttac--tctctttcacttata 88  Q
    |||||||| ||||||| |||||||||||| |||||| ||||| |||||   ||||| ||||| ||||| |  |||||||||||||||    
T  5499494 atattctattttgcatctatgataagaaggaatgcatcaatatttgac---acactcaaaactatttttctttctctttcacttata 5499411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 53
Target Start/End: Complemental strand, 22020575 - 22020527
Alignment:
Q  4 atattctactttgcatttatgataagaagaaatgcaccaatacttgacaa 53  Q
    |||||||||||||||||||||||||||| ||||| || |||| |||||||    
T  22020575 atattctactttgcatttatgataagaa-aaatgtacaaatagttgacaa 22020527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 4 - 79
Target Start/End: Complemental strand, 22872453 - 22872375
Alignment:
Q  4 atattctactttgcatttatgataa-gaagaaatgcaccaatacttgacaa--ga-cacttaaaacaattttactctctt 79  Q
    |||||| |||||||||||||||||| | || ||||||||||||||||||||  || |||||||||| ||||| |||||||    
T  22872453 atattccactttgcatttatgataatggag-aatgcaccaatacttgacaaacgagcacttaaaaccatttttctctctt 22872375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 37315990 - 37315946
Alignment:
Q  1 aacatattctactttgcatttatgataagaagaaatgcaccaata 45  Q
    ||||||||||||||||||||||||||||  | |||||||| ||||    
T  37315990 aacatattctactttgcatttatgataaagaaaaatgcactaata 37315946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 48; Significance: 2e-18; HSPs: 15)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 4 - 88
Target Start/End: Original strand, 9218187 - 9218273
Alignment:
Q  4 atattctactttgcatttatgataagaagaaatgcaccaatacttgacaagacacttaaaacaatttt--actctctttcacttata 88  Q
    ||||||||||||||||||||||||||||  ||||||||||||||| || ||||||| ||||| |||||   ||||||||||||||||    
T  9218187 atattctactttgcatttatgataagaaagaatgcaccaatacttaacgagacactcaaaactatttttctctctctttcacttata 9218273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 4 - 88
Target Start/End: Complemental strand, 39329815 - 39329729
Alignment:
Q  4 atattctactttgcatttatgataagaagaaatgcaccaatacttgacaagacacttaaaacaattttac--tctctttcacttata 88  Q
    ||||||||||||||||||||||||||||  ||||||||||||||| |||||||| | ||||| ||||  |  |||||||||||||||    
T  39329815 atattctactttgcatttatgataagaaagaatgcaccaatacttaacaagacattcaaaactatttatctttctctttcacttata 39329729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 4 - 78
Target Start/End: Complemental strand, 30261566 - 30261492
Alignment:
Q  4 atattctactttgcatttatgataagaagaaatgcaccaatacttgacaagacacttaaaacaattttactctct 78  Q
    |||||| ||||| |||||||||||||||| ||||||||||||||||||||| || | ||||| ||||| ||||||    
T  30261566 atattccactttacatttatgataagaaggaatgcaccaatacttgacaagccagtcaaaactatttttctctct 30261492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 4 - 64
Target Start/End: Original strand, 31650953 - 31651013
Alignment:
Q  4 atattctactttgcatttatgataagaagaaatgcaccaatacttgacaagacacttaaaa 64  Q
    |||||||| |||| |||||||||||  | |||||||| |||||||||||||||||||||||    
T  31650953 atattctaatttgtatttatgataatgaaaaatgcacaaatacttgacaagacacttaaaa 31651013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 4 - 71
Target Start/End: Complemental strand, 42547171 - 42547104
Alignment:
Q  4 atattctactttgcatttatgataagaagaaatgcaccaatacttgacaagacacttaaaacaatttt 71  Q
    |||||||  |||||||||||||||||||  ||||||||||||||| |||||||| | ||||| |||||    
T  42547171 atattctcttttgcatttatgataagaaagaatgcaccaatacttaacaagacattcaaaactatttt 42547104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 48409623 - 48409701
Alignment:
Q  1 aacatattctactttgcatttatgat-aagaagaaatgcaccaatacttgac-aagacacttaaaacaattttactctct 78  Q
    ||||||||||||||| |||||||||| |||||| ||| |||||||||||||| |||||||| |||||||| || ||||||    
T  48409623 aacatattctactttacatttatgataaagaag-aatccaccaatacttgacaaagacactcaaaacaatctttctctct 48409701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 4 - 55
Target Start/End: Complemental strand, 21296568 - 21296517
Alignment:
Q  4 atattctactttgcatttatgataagaagaaatgcaccaatacttgacaaga 55  Q
    ||||||||||||||||||||||||   | |||||||||||||||| ||||||    
T  21296568 atattctactttgcatttatgatagtgaaaaatgcaccaatacttaacaaga 21296517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 69
Target Start/End: Original strand, 8764380 - 8764445
Alignment:
Q  4 atattctactttgcatttatgataagaagaaatgcaccaatacttgacaagacacttaaaacaatt 69  Q
    ||||| |||||||||||||||||   ||  |||||| ||||||||||||||||||| |||| ||||    
T  8764380 atattttactttgcatttatgatgttaaagaatgcatcaatacttgacaagacactcaaaaaaatt 8764445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 65
Target Start/End: Original strand, 8769282 - 8769343
Alignment:
Q  4 atattctactttgcatttatgataagaagaaatgcaccaatacttgacaagacacttaaaac 65  Q
    |||||||||||||||||||||||   ||  |||||| |||||||||| |||||||| |||||    
T  8769282 atattctactttgcatttatgatgttaaagaatgcatcaatacttgataagacactcaaaac 8769343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 57
Target Start/End: Original strand, 45746408 - 45746461
Alignment:
Q  4 atattctactttgcatttatgataagaagaaatgcaccaatacttgacaagaca 57  Q
    ||||||||||||||||||||| ||||||  || ||||||||| ||||| |||||    
T  45746408 atattctactttgcatttatggtaagaatgaacgcaccaataattgacgagaca 45746461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 4 - 76
Target Start/End: Complemental strand, 44219098 - 44219027
Alignment:
Q  4 atattctactttgcatttatgataagaagaaatgcaccaatacttgacaagacacttaaaacaattttactct 76  Q
    ||||||||||||| |||||||||||   | |||||||||| |||| |||||||||| ||||| ||||| ||||    
T  44219098 atattctactttgtatttatgataatggggaatgcaccaacactt-acaagacactcaaaaccatttttctct 44219027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 5 - 85
Target Start/End: Complemental strand, 45267285 - 45267205
Alignment:
Q  5 tattctactttgcatttatgataagaagaaatgcaccaatacttgacaagacacttaaaacaattttactctctttcactt 85  Q
    ||||||| |||||||||||||||||||  |||| | ||||| |||| || | ||| ||||| || || |||||||||||||    
T  45267285 tattctattttgcatttatgataagaatgaatgaatcaatatttgataaaatactcaaaactatctttctctctttcactt 45267205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 34 - 85
Target Start/End: Original strand, 47684814 - 47684866
Alignment:
Q  34 aatgcaccaatacttgacaagacacttaaaacaatttt-actctctttcactt 85  Q
    ||||||||||||||||| || ||||| ||||| ||||| ||||||||||||||    
T  47684814 aatgcaccaatacttgataaaacactcaaaaccattttaactctctttcactt 47684866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 4 - 78
Target Start/End: Original strand, 51164994 - 51165069
Alignment:
Q  4 atattctactttgcatttatgat-aagaagaaatgcaccaatacttga-caagacacttaaaacaattttactctct 78  Q
    |||||||||||| |||||||||| |||||| |||||||||||||||||  |||||||| ||||  ||||| ||||||    
T  51164994 atattctactttacatttatgataaagaag-aatgcaccaatacttgataaagacactcaaaattatttttctctct 51165069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 4 - 71
Target Start/End: Complemental strand, 53583625 - 53583558
Alignment:
Q  4 atattctactttgcatttatgataa-gaagaaatgcaccaatacttgacaagacacttaaaacaatttt 71  Q
    |||||||||||||||||||| |||| |||||| |||| ||||||||||||| ||| | ||||| |||||    
T  53583625 atattctactttgcatttataataatgaagaa-tgcatcaatacttgacaacacattcaaaactatttt 53583558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 47; Significance: 8e-18; HSPs: 19)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 4 - 78
Target Start/End: Original strand, 34064257 - 34064331
Alignment:
Q  4 atattctactttgcatttatgataagaagaaatgcaccaatacttgacaagacacttaaaacaattttactctct 78  Q
    |||||||||||| |||||||||||||||  ||||||||||||||| |||||||||| ||||| ||||| ||||||    
T  34064257 atattctactttacatttatgataagaaagaatgcaccaatacttaacaagacactcaaaactatttttctctct 34064331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 4 - 89
Target Start/End: Original strand, 37264355 - 37264441
Alignment:
Q  4 atattctactttgcatttatgataagaagaaatgcaccaatacttgacaa-gacacttaaaacaattttactctctttcacttatat 89  Q
    |||||||||||||||||||||||||  || |||||| ||||||||||||| | |||| ||||| ||||| |||||||||||||||||    
T  37264355 atattctactttgcatttatgataaagagcaatgcatcaatacttgacaagggcactcaaaaccatttttctctctttcacttatat 37264441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 4 - 80
Target Start/End: Complemental strand, 40023792 - 40023716
Alignment:
Q  4 atattctactttgcatttatgataagaagaaatgcaccaatacttgacaagacacttaaaacaattttactctcttt 80  Q
    ||||| ||||||||||||||| |||| |||||||| | |||| ||||||||||||| ||||||||||| ||||||||    
T  40023792 atattttactttgcatttatggtaaggagaaatgctctaatatttgacaagacactcaaaacaatttttctctcttt 40023716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 4 - 59
Target Start/End: Complemental strand, 14648984 - 14648929
Alignment:
Q  4 atattctactttgcatttatgataagaagaaatgcaccaatacttgacaagacact 59  Q
    ||||||||| |||||||||||||||  ||||||||||||||| |||||||||||||    
T  14648984 atattctaccttgcatttatgataatgagaaatgcaccaataattgacaagacact 14648929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 4 - 78
Target Start/End: Original strand, 28333213 - 28333287
Alignment:
Q  4 atattctactttgcatttatgataagaagaaatgcaccaatacttgacaagacacttaaaacaattttactctct 78  Q
    |||||||||||| |||||||||||||||  |||||| |||||||| ||||| |||| ||||| ||||| ||||||    
T  28333213 atattctactttacatttatgataagaaataatgcatcaatacttaacaagtcactcaaaactatttttctctct 28333287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 4 - 64
Target Start/End: Complemental strand, 3667942 - 3667882
Alignment:
Q  4 atattctactttgcatttatgataagaagaaatgcaccaatacttgacaagacacttaaaa 64  Q
    |||||||||||| |||||||||||||||  ||||||| ||||||||| |||||||| ||||    
T  3667942 atattctactttacatttatgataagaaataatgcactaatacttgataagacactcaaaa 3667882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 4 - 71
Target Start/End: Complemental strand, 10355800 - 10355732
Alignment:
Q  4 atattctactttgcatttatgataagaagaaatgcaccaatacttgacaa-gacacttaaaacaatttt 71  Q
    |||||||||||||||||||||||||  ||||||||||||||| |||| || |||||| ||||| |||||    
T  10355800 atattctactttgcatttatgataaagagaaatgcaccaatagttgataaggacactcaaaaccatttt 10355732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 4 - 64
Target Start/End: Original strand, 11730830 - 11730889
Alignment:
Q  4 atattctactttgcatttatgataagaagaaatgcaccaatacttgacaagacacttaaaa 64  Q
    ||||||||||||||||||||||||||||| ||||||  |||| ||| ||||||||||||||    
T  11730830 atattctactttgcatttatgataagaagtaatgca-aaatatttggcaagacacttaaaa 11730889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 4 - 50
Target Start/End: Original strand, 25778786 - 25778832
Alignment:
Q  4 atattctactttgcatttatgataagaagaaatgcaccaatacttga 50  Q
    ||||| ||||||||||||||||||||||| |||| ||||||||||||    
T  25778786 atattttactttgcatttatgataagaaggaatgtaccaatacttga 25778832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 4 - 65
Target Start/End: Original strand, 32346560 - 32346621
Alignment:
Q  4 atattctactttgcatttatgataagaagaaatgcaccaatacttgacaagacacttaaaac 65  Q
    ||||| |||||||||||||||||||| ||||||||||| |||  ||||||| |||| |||||    
T  32346560 atattttactttgcatttatgataaggagaaatgcaccgataaatgacaagtcactcaaaac 32346621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 4 - 65
Target Start/End: Complemental strand, 37496462 - 37496401
Alignment:
Q  4 atattctactttgcatttatgataagaagaaatgcaccaatacttgacaagacacttaaaac 65  Q
    |||||||||||| |||||||||||||||  ||||||| ||||||| |||||| ||| |||||    
T  37496462 atattctactttacatttatgataagaaagaatgcacaaatacttaacaagatactcaaaac 37496401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 4 - 78
Target Start/End: Original strand, 2849297 - 2849372
Alignment:
Q  4 atattctactttgcatttatgat-aagaagaaatgcaccaatacttgac-aagacacttaaaacaattttactctct 78  Q
    |||||||||||| |||||||||| |||||| |||||||||||||||||| |||||||  ||||| ||||| ||||||    
T  2849297 atattctactttacatttatgataaagaag-aatgcaccaatacttgacaaagacacgcaaaactatttttctctct 2849372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 11 - 88
Target Start/End: Original strand, 6697130 - 6697209
Alignment:
Q  11 actttgcatttatgataagaagaaatgcaccaatacttgacaagacacttaaaacaattttactc--tctttcacttata 88  Q
    ||||||||||||||||||  | ||||||||||||||  ||||| ||||||||||  ||||| |||  |||||||||||||    
T  6697130 actttgcatttatgataatgaaaaatgcaccaatacacgacaaaacacttaaaattatttttctctttctttcacttata 6697209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 4 - 88
Target Start/End: Original strand, 8150001 - 8150087
Alignment:
Q  4 atattctactttgcatttatgataagaagaaatgcaccaatacttgacaagacacttaaaacaatttt--actctctttcacttata 88  Q
    |||||||||||||  ||||||||||    |||||||| |||| ||||||| ||||||||||| |||||   ||||||||||||||||    
T  8150001 atattctactttgattttatgataatggaaaatgcacaaatatttgacaaaacacttaaaaccatttttctctctctttcacttata 8150087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 7 - 78
Target Start/End: Original strand, 9658883 - 9658954
Alignment:
Q  7 ttctactttgcatttatgataagaagaaatgcaccaatacttgacaagacacttaaaacaattttactctct 78  Q
    ||||||||| ||||||| |||||   ||||||||||||| || |||||||||| ||||| ||||| ||||||    
T  9658883 ttctactttacatttatcataagggaaaatgcaccaatagttcacaagacactcaaaaccatttttctctct 9658954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 88
Target Start/End: Original strand, 32776025 - 32776112
Alignment:
Q  4 atattctactttgcatttatgat-aagaagaaatgcaccaatacttgac-aagacacttaaaacaattttactctct--ttcacttata 88  Q
    |||||||||||| |||||||||| |||||| ||||||||||||||| || ||| |||| ||||| ||||| ||||||  ||||||||||    
T  32776025 atattctactttacatttatgataaagaag-aatgcaccaatacttaacaaaggcactcaaaaccatttttctctctccttcacttata 32776112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 4 - 88
Target Start/End: Complemental strand, 32972083 - 32971996
Alignment:
Q  4 atattctactttgcatttatgataagaagaaatgcaccaatacttgacaa-gacacttaaaacaatttt--actctctttcacttata 88  Q
    |||||||||||||||||||||| || ||  |||||||||||| |||| || | |||| ||||| |||||   ||||||||||||||||    
T  32972083 atattctactttgcatttatgacaaaaaagaatgcaccaatagttgataagggcactcaaaaccatttttctctctctttcacttata 32971996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 4 - 88
Target Start/End: Original strand, 43007936 - 43008023
Alignment:
Q  4 atattctactttgcatttatgataagaagaaatgcaccaatacttgac-aagacacttaaaacaatttt--actctctttcacttata 88  Q
    |||||||| |||  |||||||||||  | |||||||| |||||||||| |||||||| ||||| |||||   ||||||||||||||||    
T  43007936 atattctaatttaaatttatgataaagaaaaatgcacaaatacttgacaaagacactcaaaactatttttccctctctttcacttata 43008023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 4 - 78
Target Start/End: Complemental strand, 45218223 - 45218148
Alignment:
Q  4 atattctactttgcatttatgataa-gaagaaatgcaccaatacttg-acaagacacttaaaacaattttactctct 78  Q
    |||||||||||| |||||||||||| |||||| |||||||||||||| | ||| |||| ||||| ||||| ||||||    
T  45218223 atattctactttacatttatgataaagaagaa-tgcaccaatacttgaaaaaggcactcaaaactatttttctctct 45218148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 46; Significance: 3e-17; HSPs: 6)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 4 - 65
Target Start/End: Original strand, 16126253 - 16126314
Alignment:
Q  4 atattctactttgcatttatgataagaagaaatgcaccaatacttgacaagacacttaaaac 65  Q
    ||||| |||||||||||||||||||||| |||||||||||||||| |||||||||| |||||    
T  16126253 atattatactttgcatttatgataagaataaatgcaccaatactttacaagacactcaaaac 16126314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 4 - 86
Target Start/End: Original strand, 20383887 - 20383971
Alignment:
Q  4 atattctactttgcatttatgataagaagaaatgcaccaatacttgacaagacacttaaaacaa--ttttactctctttcactta 86  Q
    |||||||| ||| |||||| |||||  || |||||||||||||||||||||||||| ||||| |  |||| ||||||||||||||    
T  20383887 atattctatttttcatttaagataatgaggaatgcaccaatacttgacaagacactcaaaaccatttttttctctctttcactta 20383971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 4 - 88
Target Start/End: Complemental strand, 15371928 - 15371842
Alignment:
Q  4 atattctactttgcatttatgat-aagaagaaatgcaccaatacttgacaagacacttaaaacaattttactct--ctttcacttata 88  Q
    ||||||||||||||||||||||| |||||| ||||||| |||| |||| |||||||| ||||| ||||| ||||  ||||||||||||    
T  15371928 atattctactttgcatttatgataaagaag-aatgcactaatagttgataagacactcaaaaccatttttctctcgctttcacttata 15371842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 4 - 78
Target Start/End: Complemental strand, 31075989 - 31075915
Alignment:
Q  4 atattctactttgcatttatgataagaagaaatgcaccaatacttgacaagacacttaaaacaattttactctct 78  Q
    ||||| || |||| ||||||||||||||| |||||||||||| |||| |||||||| || || ||||| ||||||    
T  31075989 atattatattttgtatttatgataagaaggaatgcaccaatagttgaaaagacactcaataccatttttctctct 31075915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 4 - 80
Target Start/End: Original strand, 15355617 - 15355693
Alignment:
Q  4 atattctactttgcatttatgat-aagaagaaatgcaccaatacttgacaagacacttaaaacaattttactctcttt 80  Q
    ||||||||||||| ||||||||| |||||| |||||||||||| |||| |||||||| ||||| | ||| ||||||||    
T  15355617 atattctactttggatttatgataaagaag-aatgcaccaatagttgataagacactcaaaaccaattttctctcttt 15355693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 4 - 65
Target Start/End: Complemental strand, 33018009 - 33017947
Alignment:
Q  4 atattctactttgcatttatgataa-gaagaaatgcaccaatacttgac-aagacacttaaaac 65  Q
    |||||||||||| |||||||||||| |||||| |||||||||||||||| |||||||| |||||    
T  33018009 atattctactttacatttatgataaagaagaa-tgcaccaatacttgacaaagacactcaaaac 33017947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 46; Significance: 3e-17; HSPs: 18)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 4 - 88
Target Start/End: Complemental strand, 44424328 - 44424243
Alignment:
Q  4 atattctactttgcatttatgataagaagaaatgcaccaatacttgacaagacacttaaaacaatttt-actctctttcacttata 88  Q
    |||||| |||||||||||||||||| || ||||||| ||||||||||||||||| | ||||| |||||  ||||||||||||||||    
T  44424328 atattcaactttgcatttatgataataaaaaatgcatcaatacttgacaagacattcaaaaccattttctctctctttcacttata 44424243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 7 - 88
Target Start/End: Complemental strand, 12950026 - 12949943
Alignment:
Q  7 ttctactttgcatttatgataagaagaaatgcaccaatacttgacaagacacttaaaacaa--ttttactctctttcacttata 88  Q
    |||||||||||||||||||||| ||| ||| |||||||||||||||||||||| ||||  |  |||| ||||||||||||||||    
T  12950026 ttctactttgcatttatgataaaaaggaattcaccaatacttgacaagacactcaaaattatttttttctctctttcacttata 12949943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 4 - 88
Target Start/End: Original strand, 25604403 - 25604488
Alignment:
Q  4 atattctactttgcatttatgataagaagaaatgcaccaatacttgacaagacacttaaaacaatttt--actctctttcacttata 88  Q
    |||||||| |||||||||||||||||||  ||||||||||||||| |||||||||| ||||| |||||   ||||||||||||||||    
T  25604403 atattctaatttgcatttatgataagaaagaatgcaccaatactt-acaagacactcaaaactatttttctctctctttcacttata 25604488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 4 - 88
Target Start/End: Original strand, 31592592 - 31592678
Alignment:
Q  4 atattctactttgcatttatgataagaagaaatgcaccaatacttgacaagacacttaaaacaatttt--actctctttcacttata 88  Q
    ||||||||||||| ||||||||||||||  |||||| |||||||||||||||||||  |||| |||||   ||||||||||||||||    
T  31592592 atattctactttgtatttatgataagaaagaatgcagcaatacttgacaagacactcgaaactatttttctctctctttcacttata 31592678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 13 - 76
Target Start/End: Original strand, 9937070 - 9937133
Alignment:
Q  13 tttgcatttatgataagaagaaatgcaccaatacttgacaagacacttaaaacaattttactct 76  Q
    ||||||||||||||||  ||||||||| ||||| ||||||||||||| ||||| ||||||||||    
T  9937070 tttgcatttatgataatgagaaatgcaacaatatttgacaagacactcaaaactattttactct 9937133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 4 - 78
Target Start/End: Original strand, 19515923 - 19515996
Alignment:
Q  4 atattctactttgcatttatgataagaagaaatgcaccaatacttgacaagacacttaaaacaattttactctct 78  Q
    ||||| |||||||||||||||||||  | ||||| |||||||||||||||||||| |||||| ||||| ||||||    
T  19515923 atattttactttgcatttatgataatgaaaaatgaaccaatacttgacaagacac-taaaactatttttctctct 19515996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 4 - 65
Target Start/End: Original strand, 44024760 - 44024821
Alignment:
Q  4 atattctactttgcatttatgataagaagaaatgcaccaatacttgacaagacacttaaaac 65  Q
    |||||||||||||||||||||||||  ||||||||| ||||| ||||||||| ||| |||||    
T  44024760 atattctactttgcatttatgataatgagaaatgcatcaatatttgacaagatactaaaaac 44024821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 4 - 79
Target Start/End: Original strand, 2756716 - 2756792
Alignment:
Q  4 atattctactttgcatttatgataagaagaaatgcaccaatacttgacaaga-cacttaaaacaattttactctctt 79  Q
    |||||||||||| ||||||||||||    |||||||| |||||||||||||| ||||||||| |||||| |||||||    
T  2756716 atattctactttacatttatgataatggtaaatgcactaatacttgacaagagcacttaaaataatttttctctctt 2756792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 4 - 80
Target Start/End: Complemental strand, 29937979 - 29937903
Alignment:
Q  4 atattctactttgcatttatgataagaagaaatgcaccaatacttgacaagacacttaaaacaattttactctcttt 80  Q
    ||||| ||||||| ||||||||||||||||||||||| ||||||| || ||| ||| ||||| |||||  |||||||    
T  29937979 atattttactttgtatttatgataagaagaaatgcactaatacttaactagatactcaaaactatttttttctcttt 29937903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 4 - 71
Target Start/End: Original strand, 8385117 - 8385184
Alignment:
Q  4 atattctactttgcatttatgataagaagaaatgcaccaatacttgacaagacacttaaaacaatttt 71  Q
    ||||| || ||| ||||||||||||  ||||||| | ||||||||||||||||||| |||||||||||    
T  8385117 atattatattttacatttatgataatgagaaatgaaacaatacttgacaagacactcaaaacaatttt 8385184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 34 - 88
Target Start/End: Original strand, 32556244 - 32556299
Alignment:
Q  34 aatgcaccaatacttgacaag-acacttaaaacaattttactctctttcacttata 88  Q
    ||||||||||||||||||||| | ||||||||| ||||| ||||||||||||||||    
T  32556244 aatgcaccaatacttgacaaggatacttaaaaccatttttctctctttcacttata 32556299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 4 - 80
Target Start/End: Original strand, 40710619 - 40710695
Alignment:
Q  4 atattctactttgcatttatgataagaagaaatgcaccaatacttgacaagacacttaaaacaattttactctcttt 80  Q
    |||| ||||||||||| ||||||||| |  ||||||| |||| ||||||| ||||| ||||| ||||| ||||||||    
T  40710619 atatgctactttgcatgtatgataaggaagaatgcacgaatatttgacaaaacactcaaaactatttttctctcttt 40710695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 4 - 55
Target Start/End: Original strand, 4794615 - 4794666
Alignment:
Q  4 atattctactttgcatttatgataagaagaaatgcaccaatacttgacaaga 55  Q
    |||||| |||||||||||||||||| || ||||||| ||||| |||||||||    
T  4794615 atattccactttgcatttatgataataaaaaatgcatcaatatttgacaaga 4794666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 13 - 64
Target Start/End: Original strand, 34235094 - 34235144
Alignment:
Q  13 tttgcatttatgataagaagaaatgcaccaatacttgacaagacacttaaaa 64  Q
    |||||||||||| |||| |||||||||||| |||||||||||||||| ||||    
T  34235094 tttgcatttatg-taaggagaaatgcaccagtacttgacaagacactaaaaa 34235144  T

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Target: chr2; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 4 - 78
Target Start/End: Original strand, 5425899 - 5425973
Alignment:
Q  4 atattctactttgcatttatgataagaagaaatgcaccaatacttgacaagacacttaaaacaattttactctct 78  Q
    ||||||| ||| |||||||||| | | |||||| |||||||||||||||| ||||| ||||| ||| | ||||||    
T  5425899 atattctgcttcgcatttatgacagggagaaatacaccaatacttgacaatacactcaaaactattattctctct 5425973  T

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Target: chr2; HSP #16
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 4 - 78
Target Start/End: Complemental strand, 1908559 - 1908484
Alignment:
Q  4 atattctactttgcatttatgat-aagaagaaatgcaccaatacttg-acaagacacttaaaacaattttactctct 78  Q
    |||||||||||| |||||||||| |||||| ||||||| |||||||| | |||||||| ||||| ||||| ||||||    
T  1908559 atattctactttacatttatgataaagaag-aatgcactaatacttgcaaaagacactcaaaaccatttttctctct 1908484  T

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Target: chr2; HSP #17
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 4 - 88
Target Start/End: Original strand, 2048334 - 2048421
Alignment:
Q  4 atattctactttgcatttatgataagaagaaatgcaccaatacttgacaaga-cacttaaaacaatttt--actctctttcacttata 88  Q
    |||||||||||||||||||||||||  |  |||||||||||| |||| |||| |||| | ||| |||||   ||||||||||||||||    
T  2048334 atattctactttgcatttatgataaacaagaatgcaccaatagttgataagagcactcataaccatttttctctctctttcacttata 2048421  T

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Target: chr2; HSP #18
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 4 - 89
Target Start/End: Complemental strand, 10069650 - 10069562
Alignment:
Q  4 atattctactttgcatttatgataagaagaaatgcaccaatacttgacaaga-cacttaaaa-caatttta-ctctctttcacttatat 89  Q
    |||||| ||||||||||||||||||    |||||||| |||||||||||| |  |||||||| || ||||| |||||||||||||||||    
T  10069650 atattcgactttgcatttatgataatggtaaatgcacaaatacttgacaaaagtacttaaaatcatttttatctctctttcacttatat 10069562  T

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Target: scaffold0576 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0576
Description:

Target: scaffold0576; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 4 - 80
Target Start/End: Original strand, 607 - 683
Alignment:
Q  4 atattctactttgcatttatgat-aagaagaaatgcaccaatacttgacaagacacttaaaacaattttactctcttt 80  Q
    ||||||||||||| ||||||||| |||||| |||||||||||| |||| |||||||| ||||| | ||| ||||||||    
T  607 atattctactttggatttatgataaagaag-aatgcaccaatagttgataagacactcaaaaccaattttctctcttt 683  T

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Target: scaffold0003 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 4 - 80
Target Start/End: Complemental strand, 352526 - 352449
Alignment:
Q  4 atattctactttgcatttatgataa-gaagaaatgcaccaatacttgac-aagacacttaaaacaattttactctcttt 80  Q
    |||||||||||| |||||||||||| |||||| ||||||||||||| || |||||||| ||||  ||||| ||||||||    
T  352526 atattctactttacatttatgataaagaagaa-tgcaccaatacttaacaaagacactcaaaattatttttctctcttt 352449  T

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Target: scaffold0020 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 84
Target Start/End: Original strand, 171268 - 171349
Alignment:
Q  4 atattctactttgcatttatgataagaagaaatgcaccaatacttgacaag-acacttaaaacaattttactctctttcact 84  Q
    |||||||||||| ||||||||||||    ||| |||||||||||||||||| ||| |||||||  |||| ||||| ||||||    
T  171268 atattctactttacatttatgataatggtaaacgcaccaatacttgacaagaacatttaaaaccttttttctctccttcact 171349  T

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