View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15398_low_8 (Length: 295)
Name: NF15398_low_8
Description: NF15398
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15398_low_8 |
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Alignment Details
Target: chr7 (Bit Score: 233; Significance: 1e-129; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 233; E-Value: 1e-129
Query Start/End: Original strand, 9 - 266
Target Start/End: Complemental strand, 47116852 - 47116595
Alignment:
| Q |
9 |
gatgaaacaaaacaatgtcagnnnnnnngagatatcataaggaaatgaaataacaagggtatgaggaagcttggagtggtgtccatctattgtggaagga |
108 |
Q |
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| T |
47116852 |
gatgaaacaaaacaatgtcagaaaaaaagagatatcataaggaaatgaaataacaagggtatgaggaagcttggagtggtgtccatctattgtggaagga |
47116753 |
T |
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| Q |
109 |
ttggggattcgttcattaacataacatcattgaatgagatgtatgacgtggaaattttctttgtaactgtctccccgaactttcagtaattaataccaca |
208 |
Q |
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| T |
47116752 |
ttggggattcgttcattaacataacatcattgaatgagatgtatgacgtggaacttttctttgtaactgtctccccgaactttcagtaattaataccaca |
47116653 |
T |
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| Q |
209 |
attagcacaaataatttctttcattttctctttccttaccagttttccaccaaataat |
266 |
Q |
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| T |
47116652 |
attagcacaaataatttctttcattttctctttccttaccagttttccaccaaataat |
47116595 |
T |
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