View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15399_low_17 (Length: 333)
Name: NF15399_low_17
Description: NF15399
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15399_low_17 |
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Alignment Details
Target: chr8 (Bit Score: 228; Significance: 1e-126; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 228; E-Value: 1e-126
Query Start/End: Original strand, 20 - 294
Target Start/End: Original strand, 7316519 - 7316790
Alignment:
| Q |
20 |
gaacaaggattgtaaatttgtgggatcttgtgaaatttaacttgaatggcttctgtaatatgtatttgtaatccgcaatgagttgattaataatgaaaat |
119 |
Q |
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| T |
7316519 |
gaacaatgattgtaaatttgtgggatcttgtggaatttaacttgaatggcttctgtaatatgtatttgtaatccgcaatgagttgattaataatgaaaat |
7316618 |
T |
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| Q |
120 |
gcatttcatgttaatgtcaatatatattaagttggatgcactgtcactatgtataatttttaaatagtttttcaatgtagttcctaaatttgtgacgtta |
219 |
Q |
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| T |
7316619 |
gcatttcatgttaatgtcaatatatattaagttggatgcactgtcactatgtataatttttaaatagtttttcaatgtagttcctaaatttgtgacgtta |
7316718 |
T |
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| Q |
220 |
atgtcattcaatattatcaaatatttgaatagacatttagannnnnnnagtttcaaatatcatattaacaaacaa |
294 |
Q |
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| T |
7316719 |
atgtcattgaatattatcaaa---ttgaatagacatttagatttttttagtttcaaatatcatattaacaaacaa |
7316790 |
T |
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