View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1539_low_13 (Length: 296)

Name: NF1539_low_13
Description: NF1539
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1539_low_13
NF1539_low_13
[»] chr7 (36 HSPs)
chr7 (158-281)||(36631779-36631902)
chr7 (158-281)||(5556425-5556548)
chr7 (156-281)||(8395087-8395212)
chr7 (156-281)||(34468413-34468538)
chr7 (158-282)||(3113203-3113327)
chr7 (158-281)||(7003589-7003712)
chr7 (158-281)||(7049460-7049583)
chr7 (159-277)||(14775677-14775795)
chr7 (159-277)||(15226130-15226248)
chr7 (158-282)||(8866812-8866936)
chr7 (158-282)||(26625706-26625830)
chr7 (158-282)||(38637463-38637587)
chr7 (156-282)||(37001318-37001444)
chr7 (159-282)||(43183551-43183674)
chr7 (32-123)||(36631939-36632030)
chr7 (34-123)||(34468329-34468418)
chr7 (159-281)||(36659131-36659245)
chr7 (35-123)||(8395288-8395376)
chr7 (32-118)||(3113089-3113175)
chr7 (32-118)||(14775547-14775633)
chr7 (32-118)||(15226000-15226086)
chr7 (158-222)||(33686554-33686618)
chr7 (34-118)||(11019570-11019654)
chr7 (33-118)||(25024752-25024837)
chr7 (32-118)||(7003750-7003836)
chr7 (32-118)||(7049621-7049707)
chr7 (183-229)||(11019695-11019741)
chr7 (32-123)||(36659282-36659374)
chr7 (32-105)||(19400225-19400298)
chr7 (32-105)||(22937701-22937774)
chr7 (78-123)||(47729948-47729993)
chr7 (81-123)||(25491542-25491584)
chr7 (32-118)||(33686647-33686733)
chr7 (81-118)||(9230629-9230666)
chr7 (249-282)||(11019998-11020031)
chr7 (76-105)||(26493614-26493643)
[»] chr4 (74 HSPs)
chr4 (158-281)||(40530048-40530171)
chr4 (159-281)||(25931717-25931839)
chr4 (158-281)||(13390528-13390651)
chr4 (158-281)||(17510320-17510443)
chr4 (158-281)||(36381430-36381552)
chr4 (159-281)||(13013152-13013274)
chr4 (159-281)||(47501737-47501859)
chr4 (158-281)||(28876395-28876518)
chr4 (158-281)||(44157587-44157710)
chr4 (159-281)||(26438360-26438482)
chr4 (159-275)||(50204169-50204285)
chr4 (158-281)||(13398641-13398764)
chr4 (156-282)||(33135523-33135649)
chr4 (159-281)||(34406365-34406487)
chr4 (159-281)||(43356868-43356990)
chr4 (158-281)||(30076732-30076856)
chr4 (156-282)||(3291976-3292102)
chr4 (158-281)||(10351977-10352101)
chr4 (158-282)||(42332854-42332978)
chr4 (158-282)||(43142666-43142790)
chr4 (156-282)||(6689316-6689442)
chr4 (156-282)||(35546913-35547039)
chr4 (159-276)||(20130197-20130314)
chr4 (158-282)||(30215827-30215951)
chr4 (158-281)||(37577713-37577836)
chr4 (158-255)||(29319434-29319531)
chr4 (158-281)||(1818618-1818741)
chr4 (31-123)||(40530198-40530290)
chr4 (159-273)||(30110931-30111046)
chr4 (32-118)||(17510209-17510295)
chr4 (32-118)||(26438240-26438326)
chr4 (156-280)||(29995087-29995206)
chr4 (32-118)||(20130359-20130445)
chr4 (32-118)||(29319321-29319407)
chr4 (32-118)||(34406245-34406331)
chr4 (32-118)||(43357025-43357111)
chr4 (32-118)||(47501893-47501979)
chr4 (31-118)||(13013309-13013396)
chr4 (158-282)||(7769524-7769642)
chr4 (35-123)||(25931866-25931954)
chr4 (32-123)||(36381302-36381393)
chr4 (33-118)||(13390412-13390497)
chr4 (158-221)||(6236482-6236545)
chr4 (158-266)||(48130989-48131097)
chr4 (158-228)||(26449709-26449779)
chr4 (33-123)||(48131094-48131184)
chr4 (33-118)||(29994961-29995046)
chr4 (39-123)||(13398527-13398611)
chr4 (39-119)||(26449809-26449889)
chr4 (32-119)||(37577884-37577971)
chr4 (36-123)||(44157746-44157832)
chr4 (32-123)||(50204046-50204137)
chr4 (33-118)||(10351871-10351954)
chr4 (73-123)||(6236581-6236631)
chr4 (65-123)||(12211118-12211176)
chr4 (224-281)||(48130942-48131000)
chr4 (171-228)||(48990287-48990344)
chr4 (39-118)||(33135403-33135482)
chr4 (81-123)||(17359357-17359399)
chr4 (31-123)||(31944841-31944931)
chr4 (32-118)||(1818793-1818877)
chr4 (251-281)||(26449687-26449717)
chr4 (158-204)||(42843892-42843938)
chr4 (251-281)||(48990265-48990295)
chr4 (32-105)||(3239623-3239696)
chr4 (32-105)||(5516933-5517006)
chr4 (32-85)||(6689216-6689269)
chr4 (81-118)||(31002635-31002672)
chr4 (33-105)||(6211531-6211603)
chr4 (33-85)||(7769695-7769747)
chr4 (79-123)||(21753535-21753579)
chr4 (83-115)||(24104514-24104546)
chr4 (201-265)||(29132134-29132198)
chr4 (30-58)||(35547120-35547148)
[»] chr2 (48 HSPs)
chr2 (159-281)||(17444117-17444239)
chr2 (159-281)||(41250714-41250836)
chr2 (158-281)||(18982507-18982630)
chr2 (158-281)||(42442948-42443071)
chr2 (159-281)||(6402885-6403007)
chr2 (158-281)||(16406092-16406215)
chr2 (158-281)||(31580817-31580940)
chr2 (158-281)||(32126269-32126392)
chr2 (158-281)||(35963653-35963775)
chr2 (158-281)||(771697-771820)
chr2 (156-282)||(45419544-45419670)
chr2 (158-281)||(2286870-2286986)
chr2 (156-282)||(8058422-8058548)
chr2 (159-281)||(7071611-7071733)
chr2 (31-118)||(35963802-35963889)
chr2 (32-118)||(6402768-6402854)
chr2 (158-281)||(26238577-26238701)
chr2 (32-119)||(41250588-41250675)
chr2 (32-118)||(17443987-17444073)
chr2 (32-118)||(26161698-26161784)
chr2 (32-118)||(31580687-31580773)
chr2 (32-121)||(16406237-16406326)
chr2 (35-122)||(18982653-18982740)
chr2 (32-123)||(42443097-42443188)
chr2 (156-222)||(26161812-26161878)
chr2 (32-123)||(26238698-26238789)
chr2 (33-123)||(32126182-32126272)
chr2 (33-118)||(2287029-2287114)
chr2 (35-118)||(17090226-17090309)
chr2 (33-123)||(4554296-4554386)
chr2 (32-118)||(17035712-17035798)
chr2 (168-237)||(4554394-4554463)
chr2 (31-116)||(7071521-7071606)
chr2 (45-123)||(8058317-8058395)
chr2 (65-123)||(45122219-45122277)
chr2 (31-103)||(772269-772341)
chr2 (34-105)||(26655688-26655759)
chr2 (156-205)||(12755935-12755984)
chr2 (33-105)||(18425814-18425886)
chr2 (158-206)||(26656288-26656336)
chr2 (65-105)||(35649567-35649607)
chr2 (156-212)||(45122168-45122224)
chr2 (79-118)||(33453094-33453133)
chr2 (27-105)||(42755565-42755643)
chr2 (76-105)||(40653808-40653837)
chr2 (158-198)||(17035842-17035882)
chr2 (158-198)||(17090350-17090390)
chr2 (78-118)||(31393025-31393065)
[»] chr6 (15 HSPs)
chr6 (158-281)||(34947907-34948030)
chr6 (159-281)||(13838762-13838884)
chr6 (159-281)||(399581-399703)
chr6 (158-281)||(29744232-29744356)
chr6 (158-281)||(33228432-33228556)
chr6 (156-282)||(28997691-28997817)
chr6 (158-281)||(31028035-31028159)
chr6 (37-118)||(34947798-34947879)
chr6 (31-118)||(399733-399820)
chr6 (188-259)||(34253115-34253186)
chr6 (32-118)||(29744394-29744478)
chr6 (33-107)||(34253241-34253314)
chr6 (31-118)||(33228297-33228382)
chr6 (51-106)||(24074656-24074711)
chr6 (81-118)||(11971189-11971226)
[»] chr5 (43 HSPs)
chr5 (158-281)||(13818940-13819063)
chr5 (158-281)||(16155854-16155977)
chr5 (158-281)||(16332981-16333104)
chr5 (158-281)||(39656608-39656731)
chr5 (159-281)||(36292702-36292824)
chr5 (159-275)||(39435669-39435785)
chr5 (158-281)||(19986407-19986530)
chr5 (158-281)||(10036870-10036993)
chr5 (159-281)||(26282399-26282521)
chr5 (158-274)||(1775459-1775575)
chr5 (156-282)||(28801836-28801963)
chr5 (159-282)||(17331078-17331201)
chr5 (158-281)||(36292317-36292442)
chr5 (156-282)||(12277934-12278060)
chr5 (156-282)||(31681328-31681454)
chr5 (156-282)||(33431282-33431408)
chr5 (159-247)||(43069843-43069931)
chr5 (32-118)||(39435829-39435915)
chr5 (31-123)||(1775330-1775422)
chr5 (35-123)||(13819088-13819176)
chr5 (161-279)||(31500804-31500919)
chr5 (36-122)||(10037025-10037111)
chr5 (32-118)||(26282281-26282367)
chr5 (32-118)||(36292573-36292659)
chr5 (34-118)||(16332870-16332954)
chr5 (158-248)||(37255628-37255718)
chr5 (32-123)||(16156019-16156113)
chr5 (32-123)||(19986569-19986660)
chr5 (33-123)||(28801958-28802048)
chr5 (35-123)||(39656486-39656574)
chr5 (32-118)||(31500675-31500761)
chr5 (33-118)||(43069980-43070063)
chr5 (213-281)||(15959080-15959149)
chr5 (204-275)||(192764-192835)
chr5 (32-106)||(204094-204168)
chr5 (67-118)||(192859-192910)
chr5 (32-105)||(2985846-2985919)
chr5 (35-118)||(36292493-36292574)
chr5 (33-123)||(23244429-23244520)
chr5 (81-123)||(1280806-1280848)
chr5 (32-105)||(4306673-4306746)
chr5 (32-105)||(15497447-15497520)
chr5 (73-105)||(12098059-12098091)
[»] chr1 (30 HSPs)
chr1 (158-281)||(23313957-23314080)
chr1 (158-276)||(7434390-7434508)
chr1 (158-281)||(15209369-15209493)
chr1 (159-281)||(17446256-17446378)
chr1 (156-281)||(32981137-32981262)
chr1 (158-281)||(11957439-11957562)
chr1 (156-281)||(42310017-42310145)
chr1 (159-281)||(41971337-41971460)
chr1 (183-281)||(33490342-33490441)
chr1 (32-118)||(7434535-7434621)
chr1 (33-123)||(42309899-42309989)
chr1 (36-123)||(32981008-32981095)
chr1 (32-123)||(320668-320759)
chr1 (32-118)||(17446419-17446505)
chr1 (32-107)||(15209283-15209358)
chr1 (158-228)||(3829968-3830038)
chr1 (158-248)||(35908552-35908642)
chr1 (34-116)||(41971250-41971332)
chr1 (32-94)||(26159361-26159423)
chr1 (34-118)||(3830069-3830151)
chr1 (34-123)||(23314119-23314206)
chr1 (32-121)||(11957304-11957393)
chr1 (79-118)||(30558911-30558950)
chr1 (31-98)||(48900638-48900705)
chr1 (76-123)||(52753718-52753765)
chr1 (251-281)||(3829946-3829976)
chr1 (76-106)||(35948880-35948910)
chr1 (81-123)||(48606520-48606562)
chr1 (158-206)||(17874958-17875006)
chr1 (65-105)||(17875557-17875597)
[»] scaffold0069 (2 HSPs)
scaffold0069 (159-281)||(18523-18644)
scaffold0069 (32-118)||(18687-18773)
[»] chr3 (36 HSPs)
chr3 (159-281)||(19391110-19391231)
chr3 (163-281)||(34083207-34083325)
chr3 (156-281)||(35514959-35515084)
chr3 (159-281)||(6268503-6268625)
chr3 (161-281)||(22967527-22967647)
chr3 (159-281)||(39772754-39772876)
chr3 (158-281)||(40080822-40080945)
chr3 (156-282)||(45183942-45184068)
chr3 (156-282)||(6929973-6930099)
chr3 (158-282)||(11017351-11017475)
chr3 (159-265)||(1185591-1185698)
chr3 (158-282)||(19564597-19564722)
chr3 (31-118)||(39772909-39772996)
chr3 (178-281)||(45336820-45336924)
chr3 (32-118)||(34083075-34083161)
chr3 (32-118)||(40080710-40080795)
chr3 (32-121)||(22967395-22967484)
chr3 (159-274)||(5136263-5136377)
chr3 (196-282)||(33041912-33041998)
chr3 (32-118)||(1185501-1185588)
chr3 (158-218)||(27936177-27936237)
chr3 (39-118)||(27936267-27936346)
chr3 (232-282)||(6502723-6502773)
chr3 (29-123)||(35515079-35515172)
chr3 (158-206)||(43137306-43137354)
chr3 (81-119)||(5136379-5136417)
chr3 (31-105)||(6891489-6891563)
chr3 (73-123)||(42269138-42269188)
chr3 (73-107)||(42964798-42964832)
chr3 (78-107)||(15668186-15668215)
chr3 (32-105)||(19269162-19269235)
chr3 (81-118)||(24988721-24988758)
chr3 (32-105)||(48757334-48757407)
chr3 (68-105)||(51817891-51817928)
chr3 (205-265)||(16094278-16094338)
chr3 (35-118)||(19564478-19564559)
[»] scaffold0002 (2 HSPs)
scaffold0002 (159-281)||(479538-479660)
scaffold0002 (32-118)||(479418-479504)
[»] chr8 (41 HSPs)
chr8 (156-282)||(3647870-3647996)
chr8 (159-281)||(24019472-24019594)
chr8 (159-281)||(28524162-28524284)
chr8 (159-281)||(39915478-39915600)
chr8 (158-281)||(40469948-40470072)
chr8 (158-281)||(29727465-29727588)
chr8 (158-282)||(34135886-34136010)
chr8 (159-269)||(15839252-15839362)
chr8 (158-282)||(16787106-16787230)
chr8 (158-281)||(36409447-36409570)
chr8 (156-282)||(4404970-4405096)
chr8 (158-281)||(7278989-7279113)
chr8 (159-282)||(23403030-23403153)
chr8 (159-282)||(3436195-3436319)
chr8 (32-118)||(28524315-28524401)
chr8 (37-118)||(29727350-29727431)
chr8 (32-118)||(29632505-29632591)
chr8 (32-118)||(24019355-24019441)
chr8 (32-118)||(27046933-27047019)
chr8 (32-118)||(39915631-39915717)
chr8 (213-281)||(9878183-9878251)
chr8 (159-228)||(42231922-42231991)
chr8 (32-118)||(3647743-3647828)
chr8 (158-215)||(27046841-27046898)
chr8 (31-123)||(7279149-7279241)
chr8 (159-218)||(29632413-29632472)
chr8 (32-106)||(24592196-24592270)
chr8 (38-123)||(40469866-40469951)
chr8 (32-123)||(13152253-13152344)
chr8 (33-123)||(3436318-3436408)
chr8 (32-118)||(42232022-42232108)
chr8 (32-118)||(36409619-36409703)
chr8 (76-123)||(42447149-42447196)
chr8 (68-123)||(15839399-15839454)
chr8 (251-282)||(42231899-42231930)
chr8 (186-228)||(2727959-2728001)
chr8 (251-281)||(2727993-2728023)
chr8 (31-105)||(21958757-21958831)
chr8 (32-105)||(17839572-17839645)
chr8 (31-63)||(16786999-16787031)
chr8 (158-206)||(21958692-21958740)
[»] scaffold0154 (2 HSPs)
scaffold0154 (158-281)||(32178-32301)
scaffold0154 (32-123)||(32298-32388)
[»] scaffold0178 (2 HSPs)
scaffold0178 (33-99)||(21945-22011)
scaffold0178 (33-99)||(27447-27513)
[»] scaffold0015 (2 HSPs)
scaffold0015 (31-105)||(214017-214091)
scaffold0015 (158-206)||(214108-214156)


Alignment Details
Target: chr7 (Bit Score: 112; Significance: 1e-56; HSPs: 36)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 158 - 281
Target Start/End: Complemental strand, 36631902 - 36631779
Alignment:
Q  158 gaaataaaagaggtttatcattttatcaacaaaagtgcaatttaaaatagggttattaattgaaactgaccacgtaatatacgtgaagtctaaaaattga 257  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||    
T  36631902 gaaataaaagaggtttatcattttgtcaacaaaagtgcaatttaaaatagggttattaattgaaattgaccacgtaatatacgtgaagtctgaaaattga 36631803  T
Q  258 ccctgtaattaaataacatgtatt 281  Q
    ||||||||||||||||||||||||    
T  36631802 ccctgtaattaaataacatgtatt 36631779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 104; E-Value: 7e-52
Query Start/End: Original strand, 158 - 281
Target Start/End: Complemental strand, 5556548 - 5556425
Alignment:
Q  158 gaaataaaagaggtttatcattttatcaacaaaagtgcaatttaaaatagggttattaattgaaactgaccacgtaatatacgtgaagtctaaaaattga 257  Q
    ||||||||| |||||||||||||| ||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||    
T  5556548 gaaataaaataggtttatcattttgtcaacaaaagtacaatttaaaatagggttattaattgaaattgaccacgtaatatacgtgaagtctgaaaattga 5556449  T
Q  258 ccctgtaattaaataacatgtatt 281  Q
    ||||||||||||||||||||||||    
T  5556448 ccctgtaattaaataacatgtatt 5556425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 156 - 281
Target Start/End: Complemental strand, 8395212 - 8395087
Alignment:
Q  156 ttgaaataaaagaggtttatcattttatcaacaaaagtgcaatttaaaatagggttattaattgaaactgaccacgtaatatacgtgaagtctaaaaatt 255  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||| |||||||| |||||||||||||||| ||||||    
T  8395212 ttgaaataaaagaggtttatcattttgtcaacaaaagtgcaatttaaaataggtttattaattgaaattgaccacgcaatatacgtgaagtctgaaaatt 8395113  T
Q  256 gaccctgtaattaaataacatgtatt 281  Q
    |||| |||||||||||||||||||||    
T  8395112 gaccatgtaattaaataacatgtatt 8395087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 156 - 281
Target Start/End: Original strand, 34468413 - 34468538
Alignment:
Q  156 ttgaaataaaagaggtttatcattttatcaacaaaagtgcaatttaaaatagggttattaattgaaactgaccacgtaatatacgtgaagtctaaaaatt 255  Q
    |||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||| ||| ||||||||||||||||||||| ||||||    
T  34468413 ttgaaataaaagaggtttatcattttgtcaacaaaagtacaatttaaaatagggttattaattgaaattgatcacgtaatatacgtgaagtctgaaaatt 34468512  T
Q  256 gaccctgtaattaaataacatgtatt 281  Q
    |||| |||||||||||||||||||||    
T  34468513 gaccttgtaattaaataacatgtatt 34468538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 158 - 282
Target Start/End: Original strand, 3113203 - 3113327
Alignment:
Q  158 gaaataaaagaggtttatcattttatcaacaaaagtgcaatttaaaatagggttattaattgaaactgaccacgtaatatacgtgaagtctaaaaattga 257  Q
    |||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||| |||| |||||||||||||||||||| ||||||||    
T  3113203 gaaataaaagaggtttatcattttgtcaacaaaagtacaatttaaaatagggttattaattgaaattgacaacgtaatatacgtgaagtctgaaaattga 3113302  T
Q  258 ccctgtaattaaataacatgtattt 282  Q
    ||||||||| |||||||||||||||    
T  3113303 ccctgtaatcaaataacatgtattt 3113327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 158 - 281
Target Start/End: Complemental strand, 7003712 - 7003589
Alignment:
Q  158 gaaataaaagaggtttatcattttatcaacaaaagtgcaatttaaaatagggttattaattgaaactgaccacgtaatatacgtgaagtctaaaaattga 257  Q
    |||||||||||||||||||||||| ||||||||||| |||||||||||| | ||||||||||||| |||||| |||||||||||||||||| ||||||||    
T  7003712 gaaataaaagaggtttatcattttgtcaacaaaagtacaatttaaaatatgattattaattgaaattgaccatgtaatatacgtgaagtctgaaaattga 7003613  T
Q  258 ccctgtaattaaataacatgtatt 281  Q
    |||| |||||||||||||| ||||    
T  7003612 ccctataattaaataacatatatt 7003589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 158 - 281
Target Start/End: Complemental strand, 7049583 - 7049460
Alignment:
Q  158 gaaataaaagaggtttatcattttatcaacaaaagtgcaatttaaaatagggttattaattgaaactgaccacgtaatatacgtgaagtctaaaaattga 257  Q
    |||||||||||||||||||||||| ||||||||||| |||||||||||| | ||||||||||||| |||||| |||||||||||||||||| ||||||||    
T  7049583 gaaataaaagaggtttatcattttgtcaacaaaagtacaatttaaaatatgattattaattgaaattgaccatgtaatatacgtgaagtctgaaaattga 7049484  T
Q  258 ccctgtaattaaataacatgtatt 281  Q
    |||| |||||||||||||| ||||    
T  7049483 ccctataattaaataacatatatt 7049460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 159 - 277
Target Start/End: Original strand, 14775677 - 14775795
Alignment:
Q  159 aaataaaagaggtttatcattttatcaacaaaagtgcaatttaaaatagggttattaattgaaactgaccacgtaatatacgtgaagtctaaaaattgac 258  Q
    ||||||| || |||||||||||||||||||||||| |||||||||||||||||||||||||||| | | ||||||||||||||||||||| ||||||||     
T  14775677 aaataaatgaagtttatcattttatcaacaaaagtacaatttaaaatagggttattaattgaaattaatcacgtaatatacgtgaagtctgaaaattgat 14775776  T
Q  259 cctgtaattaaataacatg 277  Q
    |||||||||||||||||||    
T  14775777 cctgtaattaaataacatg 14775795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 159 - 277
Target Start/End: Original strand, 15226130 - 15226248
Alignment:
Q  159 aaataaaagaggtttatcattttatcaacaaaagtgcaatttaaaatagggttattaattgaaactgaccacgtaatatacgtgaagtctaaaaattgac 258  Q
    ||||||| || |||||||||||||||||||||||| |||||||||||||||||||||||||||| | | ||||||||||||||||||||| ||||||||     
T  15226130 aaataaatgaagtttatcattttatcaacaaaagtacaatttaaaatagggttattaattgaaattaatcacgtaatatacgtgaagtctgaaaattgat 15226229  T
Q  259 cctgtaattaaataacatg 277  Q
    |||||||||||||||||||    
T  15226230 cctgtaattaaataacatg 15226248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 158 - 282
Target Start/End: Original strand, 8866812 - 8866936
Alignment:
Q  158 gaaataaaagaggtttatcattttatcaacaaaagtgcaatttaaaatagggttattaattgaaactgaccacgtaatatacgtgaagtctaaaaattga 257  Q
    |||||||||||||||||||||||| |||| |||||| |||||||||||| | ||||||||| ||| ||||||||||||||| ||||||||| |||||||     
T  8866812 gaaataaaagaggtttatcattttgtcaataaaagtacaatttaaaataagattattaattaaaattgaccacgtaatatatgtgaagtctgaaaattgg 8866911  T
Q  258 ccctgtaattaaataacatgtattt 282  Q
    | |||||||||||||||||||||||    
T  8866912 ctctgtaattaaataacatgtattt 8866936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 158 - 282
Target Start/End: Complemental strand, 26625830 - 26625706
Alignment:
Q  158 gaaataaaagaggtttatcattttatcaacaaaagtgcaatttaaaatagggttattaattgaaactgaccacgtaatatacgtgaagtctaaaaattga 257  Q
    |||||||||||||||||||||||| |||| |||||| |||||| ||||||| ||||||||| ||| |||||| |||||||| ||||||||| |||||||     
T  26625830 gaaataaaagaggtttatcattttgtcaataaaagtacaatttcaaataggattattaattaaaattgaccatgtaatatatgtgaagtctgaaaattgg 26625731  T
Q  258 ccctgtaattaaataacatgtattt 282  Q
    |||||||||||||||||||||||||    
T  26625730 ccctgtaattaaataacatgtattt 26625706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 158 - 282
Target Start/End: Original strand, 38637463 - 38637587
Alignment:
Q  158 gaaataaaagaggtttatcattttatcaacaaaagtgcaatttaaaatagggttattaattgaaactgaccacgtaatatacgtgaagtctaaaaattga 257  Q
    |||||||||||||||||||||||| |||| |||||| |||||||||||||| ||||||| | ||| |||||| |||||||| ||||||||| |||||||     
T  38637463 gaaataaaagaggtttatcattttgtcaataaaagtacaatttaaaataggattattaaataaaattgaccatgtaatatatgtgaagtctgaaaattgg 38637562  T
Q  258 ccctgtaattaaataacatgtattt 282  Q
    |||||||||||||||||||||||||    
T  38637563 ccctgtaattaaataacatgtattt 38637587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 156 - 282
Target Start/End: Original strand, 37001318 - 37001444
Alignment:
Q  156 ttgaaataaaagaggtttatcattttatcaacaaaagtgcaatttaaaatagggttattaattgaaactgaccacgtaatatacgtgaagtctaaaaatt 255  Q
    |||||||||||||||||||||||||| |||| |||||| |||||||||||||| ||||||||| ||| |||| |  ||||||| ||||||||| ||||||    
T  37001318 ttgaaataaaagaggtttatcattttgtcaataaaagtacaatttaaaataggattattaattaaaattgacaatataatatatgtgaagtctgaaaatt 37001417  T
Q  256 gaccctgtaattaaataacatgtattt 282  Q
    | |||||||||||||||||||||||||    
T  37001418 ggccctgtaattaaataacatgtattt 37001444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 159 - 282
Target Start/End: Original strand, 43183551 - 43183674
Alignment:
Q  159 aaataaaagaggtttatcattttatcaacaaaagtgcaatttaaaatagggttattaattgaaactgaccacgtaatatacgtgaagtctaaaaattgac 258  Q
    ||||||||||||||||||||||| |||| |||| | |||||||||||||| ||||||||| ||| |||||| |||||||| ||||||||| ||||||| |    
T  43183551 aaataaaagaggtttatcattttgtcaataaaactacaatttaaaataggattattaattaaaattgaccatgtaatatatgtgaagtctgaaaattggc 43183650  T
Q  259 cctgtaattaaataacatgtattt 282  Q
    | ||||||||||||||||||||||    
T  43183651 catgtaattaaataacatgtattt 43183674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 32 - 123
Target Start/End: Complemental strand, 36632030 - 36631939
Alignment:
Q  32 cagtggcggagccaggaaatttatggaacccgagcaaaaacttaatcgtaaattcacatgtgacataatatataaacaatcataaattgaaa 123  Q
    ||||||||||||||||||||||||||| |||| ||||||| ||||||||||||||||||||||||||||||||||||| |||||||| ||||    
T  36632030 cagtggcggagccaggaaatttatggagcccgggcaaaaaattaatcgtaaattcacatgtgacataatatataaacagtcataaatcgaaa 36631939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 34 - 123
Target Start/End: Original strand, 34468329 - 34468418
Alignment:
Q  34 gtggcggagccaggaaatttatggaacccgagcaaaaacttaatcgtaaattcacatgtgacataatatataaacaatcataaattgaaa 123  Q
    ||||||||||||||||||||||||| |||| ||||||| |||||| ||||||||||||||| |||||||||||||| |||||||||||||    
T  34468329 gtggcggagccaggaaatttatggagcccgggcaaaaaattaatcctaaattcacatgtgatataatatataaacagtcataaattgaaa 34468418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 159 - 281
Target Start/End: Complemental strand, 36659245 - 36659131
Alignment:
Q  159 aaataaaagaggtttatcattttatcaacaaaagtgcaatttaaaatagggttattaattgaaactgaccacgtaatatacgtgaagtctaaaaattgac 258  Q
    ||||||||||||||||||||||| |||| |||||| |||||||||||||| ||||||        |||||| |||||||||||||||||| | ||||| |    
T  36659245 aaataaaagaggtttatcattttgtcaataaaagtacaatttaaaataggattatta--------tgaccatgtaatatacgtgaagtctcacaattggc 36659154  T
Q  259 cctgtaattaaataacatgtatt 281  Q
    |||||||||||||||||||||||    
T  36659153 cctgtaattaaataacatgtatt 36659131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 35 - 123
Target Start/End: Complemental strand, 8395376 - 8395288
Alignment:
Q  35 tggcggagccaggaaatttatggaacccgagcaaaaacttaatcgtaaattcacatgtgacataatatataaacaatcataaattgaaa 123  Q
    |||||||||||| |||||||||||  ||| ||||||| ||||||||||||||||||||||||||||||||||||| |||||||| ||||    
T  8395376 tggcggagccagaaaatttatggaggccgggcaaaaaattaatcgtaaattcacatgtgacataatatataaacagtcataaatcgaaa 8395288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 32 - 118
Target Start/End: Original strand, 3113089 - 3113175
Alignment:
Q  32 cagtggcggagccaggaaatttatggaacccgagcaaaaacttaatcgtaaattcacatgtgacataatatataaacaatcataaat 118  Q
    ||||||||||||||| |||||||||||   || || |||| |||||||||||||||||||||| |||||||||||||||||||||||    
T  3113089 cagtggcggagccagaaaatttatggagttcgggcgaaaaattaatcgtaaattcacatgtgatataatatataaacaatcataaat 3113175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 32 - 118
Target Start/End: Original strand, 14775547 - 14775633
Alignment:
Q  32 cagtggcggagccaggaaatttatggaacccgagcaaaaacttaatcgtaaattcacatgtgacataatatataaacaatcataaat 118  Q
    ||||||||||||||||||||||||||| || | || |||| |||||||||||||||||| |||||||||||||||| | ||||||||    
T  14775547 cagtggcggagccaggaaatttatggagcctgggcgaaaaattaatcgtaaattcacatatgacataatatataaatagtcataaat 14775633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 32 - 118
Target Start/End: Original strand, 15226000 - 15226086
Alignment:
Q  32 cagtggcggagccaggaaatttatggaacccgagcaaaaacttaatcgtaaattcacatgtgacataatatataaacaatcataaat 118  Q
    ||||||||||||||||||||||||||| || | || |||| |||||||||||||||||| |||||||||||||||| | ||||||||    
T  15226000 cagtggcggagccaggaaatttatggagcctgggcgaaaaattaatcgtaaattcacatatgacataatatataaatagtcataaat 15226086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 158 - 222
Target Start/End: Complemental strand, 33686618 - 33686554
Alignment:
Q  158 gaaataaaagaggtttatcattttatcaacaaaagtgcaatttaaaatagggttattaattgaaa 222  Q
    ||||||||| |||||||||||||| ||||||||||| |||||||||||| |||||||||||||||    
T  33686618 gaaataaaataggtttatcattttgtcaacaaaagtacaatttaaaatatggttattaattgaaa 33686554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 34 - 118
Target Start/End: Original strand, 11019570 - 11019654
Alignment:
Q  34 gtggcggagccaggaaatttatggaacccgagcaaaaacttaatcgtaaattcacatgtgacataatatataaacaatcataaat 118  Q
    ||||||||||||| ||||||||||| |||| ||||||   | |||  ||||||||||||||||||||||||||||| ||||||||    
T  11019570 gtggcggagccagaaaatttatggagcccgggcaaaacaattatcacaaattcacatgtgacataatatataaacagtcataaat 11019654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 33 - 118
Target Start/End: Complemental strand, 25024837 - 25024752
Alignment:
Q  33 agtggcggagccaggaaatttatggaacccgagcaaaaacttaatcgtaaattcacatgtgacataatatataaacaatcataaat 118  Q
    ||||||||||||||||| ||||| ||  | ||||||||  |||| || |||||||||| |||||||||||||||| ||||||||||    
T  25024837 agtggcggagccaggaattttatagagtctgagcaaaattttaaccgcaaattcacatatgacataatatataaataatcataaat 25024752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 32 - 118
Target Start/End: Complemental strand, 7003836 - 7003750
Alignment:
Q  32 cagtggcggagccaggaaatttatggaacccgagcaaaaacttaatcgtaaattcacatgtgacataatatataaacaatcataaat 118  Q
    ||||||||||| ||||||||||||||| |||| |||||||   | ||  |||||||||||||| ||||||||| |||| ||||||||    
T  7003836 cagtggcggagtcaggaaatttatggagcccgggcaaaaaaaaattctcaaattcacatgtgatataatatatcaacattcataaat 7003750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 32 - 118
Target Start/End: Complemental strand, 7049707 - 7049621
Alignment:
Q  32 cagtggcggagccaggaaatttatggaacccgagcaaaaacttaatcgtaaattcacatgtgacataatatataaacaatcataaat 118  Q
    ||||||||||| ||||||||||||||| |||| |||||||   | ||  |||||||||||||| ||||||||| |||| ||||||||    
T  7049707 cagtggcggagtcaggaaatttatggagcccgggcaaaaaaaaattctcaaattcacatgtgatataatatatcaacattcataaat 7049621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 183 - 229
Target Start/End: Original strand, 11019695 - 11019741
Alignment:
Q  183 tcaacaaaagtgcaatttaaaatagggttattaattgaaactgacca 229  Q
    ||||||||||| |||||||||||||||||||||||||||| ||||||    
T  11019695 tcaacaaaagtacaatttaaaatagggttattaattgaaattgacca 11019741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 32 - 123
Target Start/End: Complemental strand, 36659374 - 36659282
Alignment:
Q  32 cagtggcggagccaggaaatttatggaacccgagcaaaaactta-atcgtaaattcacatgtgacataatatataaacaatcataaattgaaa 123  Q
    ||||||||||||||||||||| ||| |  ||| ||||||| ||  |||| |||||||||||||||||||||||| |||  |||||||| ||||    
T  36659374 cagtggcggagccaggaaattgatgtagtccgggcaaaaaattttatcgaaaattcacatgtgacataatatatcaacggtcataaatcgaaa 36659282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 32 - 105
Target Start/End: Complemental strand, 19400298 - 19400225
Alignment:
Q  32 cagtggcggagccaggaaatttatggaacccgagcaaaaacttaatcgtaaattcacatgtgacataatatata 105  Q
    ||||||||||||||| || ||||| || || | ||||||| || |||| ||||||| |||||||||||||||||    
T  19400298 cagtggcggagccagaaattttatagagcctgggcaaaaagtttatcgcaaattcatatgtgacataatatata 19400225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 32 - 105
Target Start/End: Original strand, 22937701 - 22937774
Alignment:
Q  32 cagtggcggagccaggaaatttatggaacccgagcaaaaacttaatcgtaaattcacatgtgacataatatata 105  Q
    |||||||||||||||||| |  || || || |||| |||| || |||| |||||||||||||||||||||||||    
T  22937701 cagtggcggagccaggaattacatagagcctgagcgaaaaatttatcgcaaattcacatgtgacataatatata 22937774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 78 - 123
Target Start/End: Complemental strand, 47729993 - 47729948
Alignment:
Q  78 cgtaaattcacatgtgacataatatataaacaatcataaattgaaa 123  Q
    |||||||||| ||||||||||||||||||| |||||||||| ||||    
T  47729993 cgtaaattcaaatgtgacataatatataaataatcataaatcgaaa 47729948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 81 - 123
Target Start/End: Original strand, 25491542 - 25491584
Alignment:
Q  81 aaattcacatgtgacataatatataaacaatcataaattgaaa 123  Q
    ||||| ||||||||||||||||||||| | |||||||||||||    
T  25491542 aaatttacatgtgacataatatataaatagtcataaattgaaa 25491584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 32 - 118
Target Start/End: Complemental strand, 33686733 - 33686647
Alignment:
Q  32 cagtggcggagccaggaaatttatggaacccgagcaaaaacttaatcgtaaattcacatgtgacataatatataaacaatcataaat 118  Q
    ||||| |||||| || |||||||||||   ||  |||||| || |||| |||||||||| ||| |||| ||||||||||||||||||    
T  33686733 cagtgacggagctagaaaatttatggagttcggacaaaaaatttatcgcaaattcacatatgagataacatataaacaatcataaat 33686647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 81 - 118
Target Start/End: Complemental strand, 9230666 - 9230629
Alignment:
Q  81 aaattcacatgtgacataatatataaacaatcataaat 118  Q
    ||||||||||||||||||||||||||| | ||||||||    
T  9230666 aaattcacatgtgacataatatataaatagtcataaat 9230629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 249 - 282
Target Start/End: Original strand, 11019998 - 11020031
Alignment:
Q  249 aaaaattgaccctgtaattaaataacatgtattt 282  Q
    |||||||||||||||||||||||||||| |||||    
T  11019998 aaaaattgaccctgtaattaaataacatatattt 11020031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 76 - 105
Target Start/End: Original strand, 26493614 - 26493643
Alignment:
Q  76 atcgtaaattcacatgtgacataatatata 105  Q
    ||||||||||||||||||||||||||||||    
T  26493614 atcgtaaattcacatgtgacataatatata 26493643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 112; Significance: 1e-56; HSPs: 74)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 158 - 281
Target Start/End: Complemental strand, 40530171 - 40530048
Alignment:
Q  158 gaaataaaagaggtttatcattttatcaacaaaagtgcaatttaaaatagggttattaattgaaactgaccacgtaatatacgtgaagtctaaaaattga 257  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||    
T  40530171 gaaataaaagaggtttatcattttgtcaacaaaagtgcaatttaaaatagggttattaattgaaattgaccacgtaatatacgtgaagtctgaaaattga 40530072  T
Q  258 ccctgtaattaaataacatgtatt 281  Q
    ||||||||||||||||||||||||    
T  40530071 ccctgtaattaaataacatgtatt 40530048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 159 - 281
Target Start/End: Complemental strand, 25931839 - 25931717
Alignment:
Q  159 aaataaaagaggtttatcattttatcaacaaaagtgcaatttaaaatagggttattaattgaaactgaccacgtaatatacgtgaagtctaaaaattgac 258  Q
    ||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||| |||||||||    
T  25931839 aaataaaagaggtttatcattttgttaacaaaagtgcaatttaaaatagggttattaattgaaattgaccacgtaatatacatgaagtctgaaaattgac 25931740  T
Q  259 cctgtaattaaataacatgtatt 281  Q
    |||||||||||||||||||||||    
T  25931739 cctgtaattaaataacatgtatt 25931717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 158 - 281
Target Start/End: Original strand, 13390528 - 13390651
Alignment:
Q  158 gaaataaaagaggtttatcattttatcaacaaaagtgcaatttaaaatagggttattaattgaaactgaccacgtaatatacgtgaagtctaaaaattga 257  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||| |||||| |||||||||||||||| | |||||||     
T  13390528 gaaataaaagaggtttatcattttatcaacaaaagtacaatttaaaataggattattaattgaaattgaccatgtaatatacgtgaagtttgaaaattgg 13390627  T
Q  258 ccctgtaattaaataacatgtatt 281  Q
    ||||||||||||||||||||||||    
T  13390628 ccctgtaattaaataacatgtatt 13390651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 158 - 281
Target Start/End: Original strand, 17510320 - 17510443
Alignment:
Q  158 gaaataaaagaggtttatcattttatcaacaaaagtgcaatttaaaatagggttattaattgaaactgaccacgtaatatacgtgaagtctaaaaattga 257  Q
    |||||||||||||||||||||||| ||||||||||| |||||||||||| ||||||||||||||| ||||||||||||||||||||||||| ||||||||    
T  17510320 gaaataaaagaggtttatcattttgtcaacaaaagtacaatttaaaataaggttattaattgaaattgaccacgtaatatacgtgaagtctgaaaattga 17510419  T
Q  258 ccctgtaattaaataacatgtatt 281  Q
    || ||||||||||||| |||||||    
T  17510420 ccttgtaattaaataatatgtatt 17510443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 158 - 281
Target Start/End: Original strand, 36381430 - 36381552
Alignment:
Q  158 gaaataaaagaggtttatcattttatcaacaaaagtgcaatttaaaatagggttattaattgaaactgaccacgtaatatacgtgaagtctaaaaattga 257  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||| ||||||||    
T  36381430 gaaataaaagaggtttatcattttgtcaacaaaagtgcaatttaaaatagggttattaattaaaattgaccacgtaatatacgtgaagtctgaaaattga 36381529  T
Q  258 ccctgtaattaaataacatgtatt 281  Q
     | |||||||||||||||||||||    
T  36381530 -cttgtaattaaataacatgtatt 36381552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 159 - 281
Target Start/End: Complemental strand, 13013274 - 13013152
Alignment:
Q  159 aaataaaagaggtttatcattttatcaacaaaagtgcaatttaaaatagggttattaattgaaactgaccacgtaatatacgtgaagtctaaaaattgac 258  Q
    ||||||| || |||||||||||||||||||||||| |||||||||||||||||||||||| ||| | ||||||||||||||||||||||| |||||||||    
T  13013274 aaataaatgaagtttatcattttatcaacaaaagtacaatttaaaatagggttattaatttaaattaaccacgtaatatacgtgaagtctgaaaattgac 13013175  T
Q  259 cctgtaattaaataacatgtatt 281  Q
    |||||||||||||||||||||||    
T  13013174 cctgtaattaaataacatgtatt 13013152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 159 - 281
Target Start/End: Complemental strand, 47501859 - 47501737
Alignment:
Q  159 aaataaaagaggtttatcattttatcaacaaaagtgcaatttaaaatagggttattaattgaaactgaccacgtaatatacgtgaagtctaaaaattgac 258  Q
    ||||||| || |||||||||||||||||||||||| |||||||||||||||||||||||| ||| | ||||||||||||||||||||||| |||||||||    
T  47501859 aaataaatgaagtttatcattttatcaacaaaagtacaatttaaaatagggttattaatttaaattaaccacgtaatatacgtgaagtctgaaaattgac 47501760  T
Q  259 cctgtaattaaataacatgtatt 281  Q
    |||||||||||||||||||||||    
T  47501759 cctgtaattaaataacatgtatt 47501737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 158 - 281
Target Start/End: Original strand, 28876395 - 28876518
Alignment:
Q  158 gaaataaaagaggtttatcattttatcaacaaaagtgcaatttaaaatagggttattaattgaaactgaccacgtaatatacgtgaagtctaaaaattga 257  Q
    |||||||||||||||||||||||| ||||||||||| |||||||||||||| ||||||||||||| |||||| |||||||||||||||||| ||||||||    
T  28876395 gaaataaaagaggtttatcattttgtcaacaaaagtacaatttaaaataggattattaattgaaattgaccatgtaatatacgtgaagtctgaaaattga 28876494  T
Q  258 ccctgtaattaaataacatgtatt 281  Q
    || |||||||||||||||| ||||    
T  28876495 ccttgtaattaaataacatatatt 28876518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 158 - 281
Target Start/End: Complemental strand, 44157710 - 44157587
Alignment:
Q  158 gaaataaaagaggtttatcattttatcaacaaaagtgcaatttaaaatagggttattaattgaaactgaccacgtaatatacgtgaagtctaaaaattga 257  Q
    |||||||||||||||||||||||| ||||||||||| |||||||||||||| ||||||||||||| ||| || ||||||| |||||||||| ||||||||    
T  44157710 gaaataaaagaggtttatcattttgtcaacaaaagtacaatttaaaataggattattaattgaaattgatcatgtaatatgcgtgaagtctgaaaattga 44157611  T
Q  258 ccctgtaattaaataacatgtatt 281  Q
    ||||||||||||||||||||||||    
T  44157610 ccctgtaattaaataacatgtatt 44157587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 159 - 281
Target Start/End: Original strand, 26438360 - 26438482
Alignment:
Q  159 aaataaaagaggtttatcattttatcaacaaaagtgcaatttaaaatagggttattaattgaaactgaccacgtaatatacgtgaagtctaaaaattgac 258  Q
    ||||||| || |||||||||||||||||||||||  |||||||||||||||||||||||| ||| | ||||||||||||||||||||||| |||||||||    
T  26438360 aaataaatgaagtttatcattttatcaacaaaaggacaatttaaaatagggttattaatttaaattaaccacgtaatatacgtgaagtctgaaaattgac 26438459  T
Q  259 cctgtaattaaataacatgtatt 281  Q
    |||||||||||||||||||||||    
T  26438460 cctgtaattaaataacatgtatt 26438482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 159 - 275
Target Start/End: Original strand, 50204169 - 50204285
Alignment:
Q  159 aaataaaagaggtttatcattttatcaacaaaagtgcaatttaaaatagggttattaattgaaactgaccacgtaatatacgtgaagtctaaaaattgac 258  Q
    ||||||||||||||||||||||| ||||||||||| |||||||||||||| ||||||||||||| |||||| |||||||||||||||||| ||||||| |    
T  50204169 aaataaaagaggtttatcattttgtcaacaaaagtacaatttaaaataggattattaattgaaattgaccatgtaatatacgtgaagtctgaaaattggc 50204268  T
Q  259 cctgtaattaaataaca 275  Q
    |||||||||||||||||    
T  50204269 cctgtaattaaataaca 50204285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 158 - 281
Target Start/End: Original strand, 13398641 - 13398764
Alignment:
Q  158 gaaataaaagaggtttatcattttatcaacaaaagtgcaatttaaaatagggttattaattgaaactgaccacgtaatatacgtgaagtctaaaaattga 257  Q
    |||||||||||||||||||||||| ||||||||||| |||||||||||||| |||| |||||||| |||||| |||||||||||||||||| |||||||     
T  13398641 gaaataaaagaggtttatcattttgtcaacaaaagtacaatttaaaataggattatcaattgaaattgaccatgtaatatacgtgaagtctgaaaattgg 13398740  T
Q  258 ccctgtaattaaataacatgtatt 281  Q
    | ||||||||||||||||||||||    
T  13398741 ctctgtaattaaataacatgtatt 13398764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 156 - 282
Target Start/End: Original strand, 33135523 - 33135649
Alignment:
Q  156 ttgaaataaaagaggtttatcattttatcaacaaaagtgcaatttaaaatagggttattaattgaaactgaccacgtaatatacgtgaagtctaaaaatt 255  Q
    |||||||||||||||||||||||||| ||||||||||| |||||||||||||| ||||||||||||| |||||| |||||||| ||||||||| ||||||    
T  33135523 ttgaaataaaagaggtttatcattttgtcaacaaaagtacaatttaaaataggattattaattgaaattgaccatgtaatatatgtgaagtctgaaaatt 33135622  T
Q  256 gaccctgtaattaaataacatgtattt 282  Q
    |  | ||||||||||||||||||||||    
T  33135623 ggtcatgtaattaaataacatgtattt 33135649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 159 - 281
Target Start/End: Original strand, 34406365 - 34406487
Alignment:
Q  159 aaataaaagaggtttatcattttatcaacaaaagtgcaatttaaaatagggttattaattgaaactgaccacgtaatatacgtgaagtctaaaaattgac 258  Q
    ||||||| || |||||||||||||||||||||||  |||||||||||||||||||||||| ||| | ||||||||||||||||||||||| |||||||||    
T  34406365 aaataaatgaagtttatcattttatcaacaaaaggacaatttaaaatagggttattaatttaaattaaccacgtaatatacgtgaagtctgaaaattgac 34406464  T
Q  259 cctgtaattaaataacatgtatt 281  Q
    ||||||||||||||| |||||||    
T  34406465 cctgtaattaaataatatgtatt 34406487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 159 - 281
Target Start/End: Complemental strand, 43356990 - 43356868
Alignment:
Q  159 aaataaaagaggtttatcattttatcaacaaaagtgcaatttaaaatagggttattaattgaaactgaccacgtaatatacgtgaagtctaaaaattgac 258  Q
    ||||||| || |||||||||||||||||||||||  |||||||||||||||||||||||| ||| | ||||||||||||||||||||||| |||||||||    
T  43356990 aaataaatgaagtttatcattttatcaacaaaaggacaatttaaaatagggttattaatttaaattaaccacgtaatatacgtgaagtctgaaaattgac 43356891  T
Q  259 cctgtaattaaataacatgtatt 281  Q
    ||||||||||||||| |||||||    
T  43356890 cctgtaattaaataatatgtatt 43356868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 158 - 281
Target Start/End: Original strand, 30076732 - 30076856
Alignment:
Q  158 gaaataaaagaggtttatcattttatcaacaaaagtgcaatttaaaatagggttattaattgaaactgaccacgtaatatacgtgaagtctaaaaattga 257  Q
    |||||||||||||||||||||||| ||||||||||| |||||||||||||| ||||||||||||| |||||| |||||||||||||||||| ||||||||    
T  30076732 gaaataaaagaggtttatcattttgtcaacaaaagtacaatttaaaataggattattaattgaaattgaccatgtaatatacgtgaagtctgaaaattga 30076831  T
Q  258 ccctgt-aattaaataacatgtatt 281  Q
    || ||| |||||||| |||||||||    
T  30076832 ccttgtaaattaaatcacatgtatt 30076856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 156 - 282
Target Start/End: Original strand, 3291976 - 3292102
Alignment:
Q  156 ttgaaataaaagaggtttatcattttatcaacaaaagtgcaatttaaaatagggttattaattgaaactgaccacgtaatatacgtgaagtctaaaaatt 255  Q
    |||||||||||||||||||||||||| |||| |||| | |||||||||||||| ||||||||| ||| |||||| |||||||| ||||||||| ||||||    
T  3291976 ttgaaataaaagaggtttatcattttgtcaataaaactacaatttaaaataggattattaattaaaattgaccatgtaatatatgtgaagtctgaaaatt 3292075  T
Q  256 gaccctgtaattaaataacatgtattt 282  Q
    | |||||||||||||||||||||||||    
T  3292076 ggccctgtaattaaataacatgtattt 3292102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 158 - 281
Target Start/End: Original strand, 10351977 - 10352101
Alignment:
Q  158 gaaataaaagaggtttatcattttatcaacaaaagtgcaatttaaaatagggttattaattgaaactgaccacgtaatatacgtgaagtctaaaaattga 257  Q
    |||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||| |||||| ||||||||| |||||||| ||||||||    
T  10351977 gaaataaaagaggtttatcattttgtcaacaaaagtacaatttaaaatagggttattaattgaaattgaccatgtaatatacatgaagtctgaaaattga 10352076  T
Q  258 ccctgt-aattaaataacatgtatt 281  Q
    || ||| ||||||||  ||||||||    
T  10352077 ccttgtaaattaaatcgcatgtatt 10352101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 158 - 282
Target Start/End: Original strand, 42332854 - 42332978
Alignment:
Q  158 gaaataaaagaggtttatcattttatcaacaaaagtgcaatttaaaatagggttattaattgaaactgaccacgtaatatacgtgaagtctaaaaattga 257  Q
    |||||||||||||||||||| ||| |||| |||||| |||||||||||||| ||||||||| ||| |||||| |||||||| ||||||||| |||||||     
T  42332854 gaaataaaagaggtttatcaatttgtcaataaaagtacaatttaaaataggattattaattaaaattgaccatgtaatatatgtgaagtctgaaaattgg 42332953  T
Q  258 ccctgtaattaaataacatgtattt 282  Q
    |||||||||||||||||||||||||    
T  42332954 ccctgtaattaaataacatgtattt 42332978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 158 - 282
Target Start/End: Original strand, 43142666 - 43142790
Alignment:
Q  158 gaaataaaagaggtttatcattttatcaacaaaagtgcaatttaaaatagggttattaattgaaactgaccacgtaatatacgtgaagtctaaaaattga 257  Q
    |||||||||||||||||||| ||| |||| |||||| |||||||||||||| ||||||||| ||| |||||| |||||||| ||||||||| |||||||     
T  43142666 gaaataaaagaggtttatcaatttgtcaataaaagtacaatttaaaataggattattaattaaaattgaccatgtaatatatgtgaagtctgaaaattgg 43142765  T
Q  258 ccctgtaattaaataacatgtattt 282  Q
    |||||||||||||||||||||||||    
T  43142766 ccctgtaattaaataacatgtattt 43142790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 156 - 282
Target Start/End: Original strand, 6689316 - 6689442
Alignment:
Q  156 ttgaaataaaagaggtttatcattttatcaacaaaagtgcaatttaaaatagggttattaattgaaactgaccacgtaatatacgtgaagtctaaaaatt 255  Q
    |||||||||||||||||||||||||| |||| |||| | |||||||||||||| ||||||||| ||| |||||| |||||||| || |||||| ||||||    
T  6689316 ttgaaataaaagaggtttatcattttgtcaataaaactacaatttaaaataggattattaattaaaattgaccatgtaatatatgtaaagtctgaaaatt 6689415  T
Q  256 gaccctgtaattaaataacatgtattt 282  Q
    | |||||||||||||||||||||||||    
T  6689416 ggccctgtaattaaataacatgtattt 6689442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 156 - 282
Target Start/End: Complemental strand, 35547039 - 35546913
Alignment:
Q  156 ttgaaataaaagaggtttatcattttatcaacaaaagtgcaatttaaaatagggttattaattgaaactgaccacgtaatatacgtgaagtctaaaaatt 255  Q
    |||||||||||||||||||||||||| |||| |||| | |||||||||||||| ||||||||| ||| |||||| |||||||| ||||||||| ||||||    
T  35547039 ttgaaataaaagaggtttatcattttgtcaataaaactacaatttaaaataggattattaattaaaattgaccatgtaatatatgtgaagtctgaaaatt 35546940  T
Q  256 gaccctgtaattaaataacatgtattt 282  Q
    | || ||||||||||||||||||||||    
T  35546939 ggccatgtaattaaataacatgtattt 35546913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 159 - 276
Target Start/End: Complemental strand, 20130314 - 20130197
Alignment:
Q  159 aaataaaagaggtttatcattttatcaacaaaagtgcaatttaaaatagggttattaattgaaactgaccacgtaatatacgtgaagtctaaaaattgac 258  Q
    ||||||| || |||||||||||||||||||||||| |||||||||||||||||||||||| ||| | || |||||||||||||||||||| |||||||||    
T  20130314 aaataaatgaagtttatcattttatcaacaaaagtacaatttaaaatagggttattaatttaaattaactacgtaatatacgtgaagtctgaaaattgac 20130215  T
Q  259 cctgtaattaaataacat 276  Q
    |||||| |||||| ||||    
T  20130214 cctgtagttaaatgacat 20130197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 158 - 282
Target Start/End: Original strand, 30215827 - 30215951
Alignment:
Q  158 gaaataaaagaggtttatcattttatcaacaaaagtgcaatttaaaatagggttattaattgaaactgaccacgtaatatacgtgaagtctaaaaattga 257  Q
    |||||||||||||||||||||||| |||| |||||| |||||| ||||||| ||||||||| ||| |||||| |||||||| ||||||||| |||||||     
T  30215827 gaaataaaagaggtttatcattttgtcaataaaagtacaatttcaaataggattattaattaaaattgaccatgtaatatatgtgaagtctgaaaattgg 30215926  T
Q  258 ccctgtaattaaataacatgtattt 282  Q
    || ||||||||||||||||||||||    
T  30215927 ccttgtaattaaataacatgtattt 30215951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 158 - 281
Target Start/End: Complemental strand, 37577836 - 37577713
Alignment:
Q  158 gaaataaaagaggtttatcattttatcaacaaaagtgcaatttaaaatagggttattaattgaaactgaccacgtaatatacgtgaagtctaaaaattga 257  Q
    |||||||||||||||||||||||| ||||||||| | ||||||||| |||| ||||||||||||| ||| || ||||||||| |||||||| |||||| |    
T  37577836 gaaataaaagaggtttatcattttgtcaacaaaaatacaatttaaattaggattattaattgaaattgatcatgtaatatacatgaagtctgaaaattaa 37577737  T
Q  258 ccctgtaattaaataacatgtatt 281  Q
    || |||||||||||||||||||||    
T  37577736 ccttgtaattaaataacatgtatt 37577713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 158 - 255
Target Start/End: Original strand, 29319434 - 29319531
Alignment:
Q  158 gaaataaaagaggtttatcattttatcaacaaaagtgcaatttaaaatagggttattaattgaaactgaccacgtaatatacgtgaagtctaaaaatt 255  Q
    |||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||| |||| ||||||||||| |||||||| ||||||    
T  29319434 gaaataaaagaggtttatcattttgtcaacaaaagtacaatttaaaatagggttattaattgaaattgacaacgtaatatacctgaagtctgaaaatt 29319531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 158 - 281
Target Start/End: Complemental strand, 1818741 - 1818618
Alignment:
Q  158 gaaataaaagaggtttatcattttatcaacaaaagtgcaatttaaaatagggttattaattgaaactgaccacgtaatatacgtgaagtctaaaaattga 257  Q
    |||||||||||||||||||||||| ||||||||||| |||||||||||| ||||||||||||||| |||||| |||||||||||||||||| |||||| |    
T  1818741 gaaataaaagaggtttatcattttgtcaacaaaagtacaatttaaaata-ggttattaattgaaattgaccatgtaatatacgtgaagtctgaaaattaa 1818643  T
Q  258 ccctgta-attaaataacatgtatt 281  Q
    || |||| || |||| |||||||||    
T  1818642 ccttgtatataaaatcacatgtatt 1818618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 31 - 123
Target Start/End: Complemental strand, 40530290 - 40530198
Alignment:
Q  31 acagtggcggagccaggaaatttatggaacccgagcaaaaacttaatcgtaaattcacatgtgacataatatataaacaatcataaattgaaa 123  Q
    |||||||||||||||||||||||||||| ||| |||||||| ||||||||||||||||||||||||||||||||||||| |||||||| ||||    
T  40530290 acagtggcggagccaggaaatttatggagccctagcaaaaaattaatcgtaaattcacatgtgacataatatataaacagtcataaatcgaaa 40530198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 159 - 273
Target Start/End: Complemental strand, 30111046 - 30110931
Alignment:
Q  159 aaataaaagaggtttatcattttatcaacaaaagtgcaatttaaaatagggttattaattgaaactgaccacgtaatatacgtgaagtct-aaaaattga 257  Q
    |||||||| |||||  | ||||| ||||||||||| |||||||||||| ||||||| ||||||| |||||| |||||||||||||||||| |||||||||    
T  30111046 aaataaaataggttctttattttgtcaacaaaagtacaatttaaaatatggttattgattgaaattgaccatgtaatatacgtgaagtctgaaaaattga 30110947  T
Q  258 ccctgtaattaaataa 273  Q
    ||||||||||||||||    
T  30110946 ccctgtaattaaataa 30110931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 32 - 118
Target Start/End: Original strand, 17510209 - 17510295
Alignment:
Q  32 cagtggcggagccaggaaatttatggaacccgagcaaaaacttaatcgtaaattcacatgtgacataatatataaacaatcataaat 118  Q
    ||||||||||||||||||||||||||| | || ||||||| ||||||||||||||||||||||||||||||||||||| ||||||||    
T  17510209 cagtggcggagccaggaaatttatggagcacgggcaaaaaattaatcgtaaattcacatgtgacataatatataaacagtcataaat 17510295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 32 - 118
Target Start/End: Original strand, 26438240 - 26438326
Alignment:
Q  32 cagtggcggagccaggaaatttatggaacccgagcaaaaacttaatcgtaaattcacatgtgacataatatataaacaatcataaat 118  Q
    ||||||||||||||||||||||||||| || | ||||||| ||||||||||||||||||||||||||||||||||||| ||||||||    
T  26438240 cagtggcggagccaggaaatttatggagcctgggcaaaaaattaatcgtaaattcacatgtgacataatatataaacagtcataaat 26438326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 156 - 280
Target Start/End: Original strand, 29995087 - 29995206
Alignment:
Q  156 ttgaaataaaagaggtttatcattttatcaacaaaagtgcaatttaaaatagggttattaattgaaactgaccacgtaatatacgtgaagtctaaaaatt 255  Q
    |||||||||||||||||||||||||| |||||||||      ||||||||||| ||||||||||||| |||||| |||||||||||||||||| ||||||    
T  29995087 ttgaaataaaagaggtttatcattttgtcaacaaaa------tttaaaataggattattaattgaaattgaccatgtaatatacgtgaagtctgaaaatt 29995180  T
Q  256 gaccctgt-aattaaataacatgtat 280  Q
    ||||| || |||||||| ||||||||    
T  29995181 gaccccgtaaattaaatcacatgtat 29995206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 32 - 118
Target Start/End: Complemental strand, 20130445 - 20130359
Alignment:
Q  32 cagtggcggagccaggaaatttatggaacccgagcaaaaacttaatcgtaaattcacatgtgacataatatataaacaatcataaat 118  Q
    ||||||||||||||||||||||||||| || | || |||| ||||||||||||||||||||||||||||||||||||| ||||||||    
T  20130445 cagtggcggagccaggaaatttatggagcctgggcgaaaaattaatcgtaaattcacatgtgacataatatataaacagtcataaat 20130359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 32 - 118
Target Start/End: Original strand, 29319321 - 29319407
Alignment:
Q  32 cagtggcggagccaggaaatttatggaacccgagcaaaaacttaatcgtaaattcacatgtgacataatatataaacaatcataaat 118  Q
    |||| |||||||||||||||||||||| |||| || |||| |||||||||||||||||||||| |||||||||||||||||||||||    
T  29319321 cagttgcggagccaggaaatttatggagcccgggcgaaaaattaatcgtaaattcacatgtgatataatatataaacaatcataaat 29319407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 32 - 118
Target Start/End: Original strand, 34406245 - 34406331
Alignment:
Q  32 cagtggcggagccaggaaatttatggaacccgagcaaaaacttaatcgtaaattcacatgtgacataatatataaacaatcataaat 118  Q
    ||||||||||||||||||||||||||| || | || |||| ||||||||||||||||||||||||||||||||||||| ||||||||    
T  34406245 cagtggcggagccaggaaatttatggagcctgggcgaaaaattaatcgtaaattcacatgtgacataatatataaacagtcataaat 34406331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 32 - 118
Target Start/End: Complemental strand, 43357111 - 43357025
Alignment:
Q  32 cagtggcggagccaggaaatttatggaacccgagcaaaaacttaatcgtaaattcacatgtgacataatatataaacaatcataaat 118  Q
    ||||||||||||||||||||||||||| || | || |||| ||||||||||||||||||||||||||||||||||||| ||||||||    
T  43357111 cagtggcggagccaggaaatttatggagcctgggcgaaaaattaatcgtaaattcacatgtgacataatatataaacagtcataaat 43357025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 32 - 118
Target Start/End: Complemental strand, 47501979 - 47501893
Alignment:
Q  32 cagtggcggagccaggaaatttatggaacccgagcaaaaacttaatcgtaaattcacatgtgacataatatataaacaatcataaat 118  Q
    ||||||||||||||||||||||||||| || | || |||| |||||||||||||||||||||| |||||||||||||||||||||||    
T  47501979 cagtggcggagccaggaaatttatggagcctgggcgaaaaattaatcgtaaattcacatgtgatataatatataaacaatcataaat 47501893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 31 - 118
Target Start/End: Complemental strand, 13013396 - 13013309
Alignment:
Q  31 acagtggcggagccaggaaatttatggaacccgagcaaaaacttaatcgtaaattcacatgtgacataatatataaacaatcataaat 118  Q
    |||||||||||||||||||||||||||| || | || |||| |||||||||||||||||||||| |||||||||||||| ||||||||    
T  13013396 acagtggcggagccaggaaatttatggagcctgggcgaaaaattaatcgtaaattcacatgtgatataatatataaacagtcataaat 13013309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 158 - 282
Target Start/End: Complemental strand, 7769642 - 7769524
Alignment:
Q  158 gaaataaaagaggtttatcattttatcaacaaaagtgcaatttaaaatagggttattaattgaaactgaccacgtaatatacgtgaagtctaaaaattga 257  Q
    |||||||||||||||||||||||| |||| |||||| |||||||||||||  ||||||||| ||| |||||| |||||||| |||      ||||||||     
T  7769642 gaaataaaagaggtttatcattttgtcaataaaagtacaatttaaaatagaattattaattaaaattgaccatgtaatatatgtg------aaaaattgg 7769549  T
Q  258 ccctgtaattaaataacatgtattt 282  Q
    || ||||||||||||||||||||||    
T  7769548 ccatgtaattaaataacatgtattt 7769524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 35 - 123
Target Start/End: Complemental strand, 25931954 - 25931866
Alignment:
Q  35 tggcggagccaggaaatttatggaacccgagcaaaaacttaatcgtaaattcacatgtgacataatatataaacaatcataaattgaaa 123  Q
    |||| ||||||  ||||||||||| |||| ||||||| ||||||||||||||||||||||||||||||||||||| |||||||| ||||    
T  25931954 tggcagagccaaaaaatttatggagcccgggcaaaaaattaatcgtaaattcacatgtgacataatatataaacagtcataaatcgaaa 25931866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 32 - 123
Target Start/End: Original strand, 36381302 - 36381393
Alignment:
Q  32 cagtggcggagccaggaaatttatgga-acccgagcaaaaacttaatcgtaaattcacatgtgacataatatataaacaatcataaattgaaa 123  Q
    ||||||||||||||||||||||||||| ||| || |||||| ||||| ||||||||||||||||||||||||||||||| |||||||| ||||    
T  36381302 cagtggcggagccaggaaatttatggagaccaga-caaaaaattaattgtaaattcacatgtgacataatatataaacagtcataaatcgaaa 36381393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 33 - 118
Target Start/End: Original strand, 13390412 - 13390497
Alignment:
Q  33 agtggcggagccaggaaatttatggaacccgagcaaaaacttaatcgtaaattcacatgtgacataatatataaacaatcataaat 118  Q
    |||||||||||||||||||||||| | | |  ||||||| |||||||||||||||||||||||||||||||| |||| ||||||||    
T  13390412 agtggcggagccaggaaatttatgaagctctggcaaaaaattaatcgtaaattcacatgtgacataatatatcaacagtcataaat 13390497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 158 - 221
Target Start/End: Complemental strand, 6236545 - 6236482
Alignment:
Q  158 gaaataaaagaggtttatcattttatcaacaaaagtgcaatttaaaatagggttattaattgaa 221  Q
    |||||||||||||||||||||||||||||||||| | |||||||||||| ||||||||||||||    
T  6236545 gaaataaaagaggtttatcattttatcaacaaaaatacaatttaaaatacggttattaattgaa 6236482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 158 - 266
Target Start/End: Complemental strand, 48131097 - 48130989
Alignment:
Q  158 gaaataaaagaggtttatcattttatcaacaaaagtgcaatttaaaatagggttattaattgaaactgaccacgtaatatacgtgaagtct-aaaaattg 256  Q
    ||||||||| |||||  || |||| ||||||||||| || |||||| |||||||||||||||||| |||||| ||||||||||| |||||| ||||||||    
T  48131097 gaaataaaaaaggttcctccttttgtcaacaaaagtacattttaaa-tagggttattaattgaaattgaccatgtaatatacgttaagtctgaaaaattg 48130999  T
Q  257 accctgtaat 266  Q
    ||| ||||||    
T  48130998 accatgtaat 48130989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 158 - 228
Target Start/End: Complemental strand, 26449779 - 26449709
Alignment:
Q  158 gaaataaaagaggtttatcattttatcaacaaaagtgcaatttaaaatagggttattaattgaaactgacc 228  Q
    ||||||||| |||||||||||||| ||||||||||| |||| ||||||||| ||||||||||||| |||||    
T  26449779 gaaataaaataggtttatcattttgtcaacaaaagtacaatgtaaaataggattattaattgaaattgacc 26449709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 33 - 123
Target Start/End: Complemental strand, 48131184 - 48131094
Alignment:
Q  33 agtggcggagccaggaaatttatggaacccgagcaaaaacttaatcgtaaattcacatgtgacataatatataaacaatcataaattgaaa 123  Q
    ||||||||||||||||||||||||||  | | |||||||  | |||| ||||| ||||||||||||||||||||||| |||||||| ||||    
T  48131184 agtggcggagccaggaaatttatggagtctgggcaaaaaaattatcgcaaattaacatgtgacataatatataaacattcataaatcgaaa 48131094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 33 - 118
Target Start/End: Original strand, 29994961 - 29995046
Alignment:
Q  33 agtggcggagccaggaaatttatggaacccgagcaaaaacttaatcgtaaattcacatgtgacataatatataaacaatcataaat 118  Q
    |||||||||| ||||||||||||||| ||||   ||||| || |||||||||| | ||||||||||||||||||||| ||||||||    
T  29994961 agtggcggagtcaggaaatttatggagcccggataaaaaattgatcgtaaatttatatgtgacataatatataaacagtcataaat 29995046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 39 - 123
Target Start/End: Original strand, 13398527 - 13398611
Alignment:
Q  39 ggagccaggaaatttatggaacccgagcaaaaacttaatcgtaaattcacatgtgacataatatataaacaatcataaattgaaa 123  Q
    |||||||||||||||||| |   || ||||||| || ||||||||||||||||||||||||||||| |||| |||||||| ||||    
T  13398527 ggagccaggaaatttatgaagttcgggcaaaaaatttatcgtaaattcacatgtgacataatatatcaacagtcataaatcgaaa 13398611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 39 - 119
Target Start/End: Complemental strand, 26449889 - 26449809
Alignment:
Q  39 ggagccaggaaatttatggaacccgagcaaaaacttaatcgtaaattcacatgtgacataatatataaacaatcataaatt 119  Q
    ||||| |||||||||||||| | || ||||||| || |||| |||||||||||||| |||||||||||||||| |||||||    
T  26449889 ggagctaggaaatttatggagctcgggcaaaaaatttatcgcaaattcacatgtgagataatatataaacaattataaatt 26449809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 32 - 119
Target Start/End: Complemental strand, 37577971 - 37577884
Alignment:
Q  32 cagtggcggagccaggaaatttatggaacccgagcaaaaacttaatcgtaaattcacatgtgacataatatataaacaatcataaatt 119  Q
    ||||| ||| |||| ||||||||||||   || ||||||| || |||| |||||||||| ||||||||||||||||||||||||||||    
T  37577971 cagtgacggggccatgaaatttatggagttcgggcaaaaaatttatcgcaaattcacatatgacataatatataaacaatcataaatt 37577884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 36 - 123
Target Start/End: Complemental strand, 44157832 - 44157746
Alignment:
Q  36 ggcggagccaggaaatttatggaacccgagcaaaaacttaatcgtaaattcacatgtgacataatatataaacaatcataaattgaaa 123  Q
    ||||||| ||||||||||||||| || | ||||||| || |||| |||||||||||||||||||||||| |||| | |||||||||||    
T  44157832 ggcggagtcaggaaatttatggagccgg-gcaaaaaatttatcgcaaattcacatgtgacataatatatcaacagttataaattgaaa 44157746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 32 - 123
Target Start/End: Original strand, 50204046 - 50204137
Alignment:
Q  32 cagtggcggagccaggaaatttatggaacccgagcaaaaacttaatcgtaaattcacatgtgacataatatataaacaatcataaattgaaa 123  Q
    ||||||||||||||||||||||||||| | |  | ||||| || |||| ||||| |||||||||||||||||| |||| |||||||| ||||    
T  50204046 cagtggcggagccaggaaatttatggagctcaggaaaaaaatttatcgcaaatttacatgtgacataatatatcaacagtcataaatcgaaa 50204137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 33 - 118
Target Start/End: Original strand, 10351871 - 10351954
Alignment:
Q  33 agtggcggagccaggaaatttatggaacccgagcaaaaacttaatcgtaaattcacatgtgacataatatataaacaatcataaat 118  Q
    |||||||||||||||||||||||||| |||| || |||| || |||| || ||||||||||  |||||||||||||| ||||||||    
T  10351871 agtggcggagccaggaaatttatggagcccgggcgaaaaatttatcgcaacttcacatgtg--ataatatataaacagtcataaat 10351954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 73 - 123
Target Start/End: Complemental strand, 6236631 - 6236581
Alignment:
Q  73 ttaatcgtaaattcacatgtgacataatatataaacaatcataaattgaaa 123  Q
    ||||||||||||||| ||||||||||||||||||||| |||||||| ||||    
T  6236631 ttaatcgtaaattcatatgtgacataatatataaacagtcataaatcgaaa 6236581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 65 - 123
Target Start/End: Original strand, 12211118 - 12211176
Alignment:
Q  65 gcaaaaacttaatcgtaaattcacatgtgacataatatataaacaatcataaattgaaa 123  Q
    ||||||| || |||| ||||||||||||||||||||||||||| |||||||||| ||||    
T  12211118 gcaaaaaatttatcgcaaattcacatgtgacataatatataaataatcataaatcgaaa 12211176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 224 - 281
Target Start/End: Complemental strand, 48131000 - 48130942
Alignment:
Q  224 tgaccacgtaatatacgtgaagtct-aaaaattgaccctgtaattaaataacatgtatt 281  Q
    |||||| |||||||||| ||||||| ||||||||||| |||||||||||||||||||||    
T  48131000 tgaccatgtaatatacgcgaagtctgaaaaattgaccatgtaattaaataacatgtatt 48130942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 171 - 228
Target Start/End: Complemental strand, 48990344 - 48990287
Alignment:
Q  171 tttatcattttatcaacaaaagtgcaatttaaaatagggttattaattgaaactgacc 228  Q
    ||||||||||| |||| |||||| ||||||||||||| |||||||||||||| |||||    
T  48990344 tttatcattttgtcaataaaagtacaatttaaaatagagttattaattgaaattgacc 48990287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 39 - 118
Target Start/End: Original strand, 33135403 - 33135482
Alignment:
Q  39 ggagccaggaaatttatggaacccgagcaaaaacttaatcgtaaattcacatgtgacataatatataaacaatcataaat 118  Q
    |||||||| ||||||||||| | ||  |||||| || |||  |||||||||||||||||||||||| |||| ||||||||    
T  33135403 ggagccagaaaatttatggagctcggacaaaaaatttatcacaaattcacatgtgacataatatatcaacagtcataaat 33135482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 81 - 123
Target Start/End: Complemental strand, 17359399 - 17359357
Alignment:
Q  81 aaattcacatgtgacataatatataaacaatcataaattgaaa 123  Q
    ||||||||||||||||||||||||||| |||||||||| ||||    
T  17359399 aaattcacatgtgacataatatataaataatcataaatcgaaa 17359357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 31 - 123
Target Start/End: Complemental strand, 31944931 - 31944841
Alignment:
Q  31 acagtggcggagccaggaaatttatggaacccgagcaaaaacttaatcgtaaattcacatgtgacataatatataaacaatcataaattgaaa 123  Q
    ||||||||| ||||||||| ||||| || | |||||||||  || | ||||||| |||||| ||||||||||||||| ||||| |||||||||    
T  31944931 acagtggcgtagccaggaattttatcgagcgcgagcaaaat-ttgaccgtaaat-cacatgcgacataatatataaataatcaaaaattgaaa 31944841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 32 - 118
Target Start/End: Complemental strand, 1818877 - 1818793
Alignment:
Q  32 cagtggcggagccaggaaatttatggaacccgagcaaaaacttaatcgtaaattcacatgtgacataatatataaacaatcataaat 118  Q
    |||||||||||||||||||||||| || | || || |||| || |||  |||||||||||||  | |||||||||||| ||||||||    
T  1818877 cagtggcggagccaggaaatttatagagcacgggcgaaaaatttatcacaaattcacatgtg--aaaatatataaacagtcataaat 1818793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 251 - 281
Target Start/End: Complemental strand, 26449717 - 26449687
Alignment:
Q  251 aaattgaccctgtaattaaataacatgtatt 281  Q
    |||||||||||||||||||||||||||||||    
T  26449717 aaattgaccctgtaattaaataacatgtatt 26449687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 158 - 204
Target Start/End: Complemental strand, 42843938 - 42843892
Alignment:
Q  158 gaaataaaagaggtttatcattttatcaacaaaagtgcaatttaaaa 204  Q
    |||||||||||||||  ||||||| ||||||||||| ||||||||||    
T  42843938 gaaataaaagaggttcgtcattttttcaacaaaagtacaatttaaaa 42843892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 251 - 281
Target Start/End: Complemental strand, 48990295 - 48990265
Alignment:
Q  251 aaattgaccctgtaattaaataacatgtatt 281  Q
    |||||||||||||||||||||||||||||||    
T  48990295 aaattgaccctgtaattaaataacatgtatt 48990265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 32 - 105
Target Start/End: Original strand, 3239623 - 3239696
Alignment:
Q  32 cagtggcggagccaggaaatttatggaacccgagcaaaaacttaatcgtaaattcacatgtgacataatatata 105  Q
    |||||||||||||  ||| ||||| || || |  |||||| || || |||||||||||||||||||||||||||    
T  3239623 cagtggcggagcctagaattttatagagcctgcacaaaaaatttattgtaaattcacatgtgacataatatata 3239696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 32 - 105
Target Start/End: Original strand, 5516933 - 5517006
Alignment:
Q  32 cagtggcggagccaggaaatttatggaacccgagcaaaaacttaatcgtaaattcacatgtgacataatatata 105  Q
    |||||||||||||||||| |  || || || | || |||| || |||| |||||||||||||||||||||||||    
T  5516933 cagtggcggagccaggaactacatagagcctgggcgaaaaatttatcgcaaattcacatgtgacataatatata 5517006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 32 - 85
Target Start/End: Original strand, 6689216 - 6689269
Alignment:
Q  32 cagtggcggagccaggaaatttatggaacccgagcaaaaacttaatcgtaaatt 85  Q
    ||||||||||||||||||||||||||| |||| || |||| || ||| ||||||    
T  6689216 cagtggcggagccaggaaatttatggagcccgggcgaaaaatttatcctaaatt 6689269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 81 - 118
Target Start/End: Original strand, 31002635 - 31002672
Alignment:
Q  81 aaattcacatgtgacataatatataaacaatcataaat 118  Q
    ||||||||||||||||||||||||||| | ||||||||    
T  31002635 aaattcacatgtgacataatatataaatagtcataaat 31002672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 33 - 105
Target Start/End: Original strand, 6211531 - 6211603
Alignment:
Q  33 agtggcggagccaggaaatttatggaacccgagcaaaaacttaatcgtaaattcacatgtgacataatatata 105  Q
    |||||||||| |||||| |  || || || |||| |||| || |||| |||||||||||||||||||||||||    
T  6211531 agtggcggagtcaggaattacatagagcctgagcgaaaaatttatcgcaaattcacatgtgacataatatata 6211603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 33 - 85
Target Start/End: Complemental strand, 7769747 - 7769695
Alignment:
Q  33 agtggcggagccaggaaatttatggaacccgagcaaaaacttaatcgtaaatt 85  Q
    |||||||||||||||||||||||||| |||| || |||| || ||| ||||||    
T  7769747 agtggcggagccaggaaatttatggagcccgggcgaaaaatttatcctaaatt 7769695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 79 - 123
Target Start/End: Original strand, 21753535 - 21753579
Alignment:
Q  79 gtaaattcacatgtgacataatatataaacaatcataaattgaaa 123  Q
    |||||||||||| |||||||||||||||| ||| |||||| ||||    
T  21753535 gtaaattcacatatgacataatatataaataattataaatcgaaa 21753579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 83 - 115
Target Start/End: Original strand, 24104514 - 24104546
Alignment:
Q  83 attcacatgtgacataatatataaacaatcata 115  Q
    ||||||||||||||||||||||||||| |||||    
T  24104514 attcacatgtgacataatatataaacagtcata 24104546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 201 - 265
Target Start/End: Original strand, 29132134 - 29132198
Alignment:
Q  201 aaaatagggttattaattgaaactgaccacgtaatatacgtgaagtctaaaaattgaccctgtaa 265  Q
    |||||||||||| | ||||||| ||| || |||||||||| ||||||| |||| |||| ||||||    
T  29132134 aaaatagggttaattattgaaattgatcatgtaatatacgcgaagtctgaaaaatgacactgtaa 29132198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 30 - 58
Target Start/End: Complemental strand, 35547148 - 35547120
Alignment:
Q  30 cacagtggcggagccaggaaatttatgga 58  Q
    |||||||||||||||||||||||||||||    
T  35547148 cacagtggcggagccaggaaatttatgga 35547120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 111; Significance: 5e-56; HSPs: 48)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 159 - 281
Target Start/End: Original strand, 17444117 - 17444239
Alignment:
Q  159 aaataaaagaggtttatcattttatcaacaaaagtgcaatttaaaatagggttattaattgaaactgaccacgtaatatacgtgaagtctaaaaattgac 258  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||    
T  17444117 aaataaaagaggtttatcattttatcaacaaaagtacaatttaaaatagggttattaattgaaattgaccacgtaatatacgtgaagtctgaaaattgac 17444216  T
Q  259 cctgtaattaaataacatgtatt 281  Q
    |||||||||||||||||||||||    
T  17444217 cctgtaattaaataacatgtatt 17444239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 159 - 281
Target Start/End: Original strand, 41250714 - 41250836
Alignment:
Q  159 aaataaaagaggtttatcattttatcaacaaaagtgcaatttaaaatagggttattaattgaaactgaccacgtaatatacgtgaagtctaaaaattgac 258  Q
    ||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||| |||||||||    
T  41250714 aaataaatgaagtttatcattttatcaacaaaagtgcaatttaaaatagggttattaattgaaattaaccacgtaatatacgtgaagtctgaaaattgac 41250813  T
Q  259 cctgtaattaaataacatgtatt 281  Q
    | |||||||||||||||||||||    
T  41250814 catgtaattaaataacatgtatt 41250836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 158 - 281
Target Start/End: Complemental strand, 18982630 - 18982507
Alignment:
Q  158 gaaataaaagaggtttatcattttatcaacaaaagtgcaatttaaaatagggttattaattgaaactgaccacgtaatatacgtgaagtctaaaaattga 257  Q
    |||||||||||||||||||||||| ||||||||||| |||||||||||| ||||||||||||||| | ||||||||||||||||||||||| |||||| |    
T  18982630 gaaataaaagaggtttatcattttgtcaacaaaagtacaatttaaaatatggttattaattgaaatttaccacgtaatatacgtgaagtctgaaaattta 18982531  T
Q  258 ccctgtaattaaataacatgtatt 281  Q
    ||||||||||||||||||||||||    
T  18982530 ccctgtaattaaataacatgtatt 18982507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 158 - 281
Target Start/End: Complemental strand, 42443071 - 42442948
Alignment:
Q  158 gaaataaaagaggtttatcattttatcaacaaaagtgcaatttaaaatagggttattaattgaaactgaccacgtaatatacgtgaagtctaaaaattga 257  Q
    |||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||| |||||| |||||||||||||||||| ||||| ||    
T  42443071 gaaataaaagaggtttatcattttgtcaacaaaagtacaatttaaaatagggttattaattgaaattgaccatgtaatatacgtgaagtctgaaaatgga 42442972  T
Q  258 ccctgtaattaaataacatgtatt 281  Q
    || |||||||||||||||||||||    
T  42442971 ccatgtaattaaataacatgtatt 42442948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 159 - 281
Target Start/End: Original strand, 6402885 - 6403007
Alignment:
Q  159 aaataaaagaggtttatcattttatcaacaaaagtgcaatttaaaatagggttattaattgaaactgaccacgtaatatacgtgaagtctaaaaattgac 258  Q
    ||||||| || |||||||||||||||||||||||| |||||||||||||||||||||||| ||| | ||||||||||||||||||||||| |||||||||    
T  6402885 aaataaatgaagtttatcattttatcaacaaaagtacaatttaaaatagggttattaatttaaattaaccacgtaatatacgtgaagtctgaaaattgac 6402984  T
Q  259 cctgtaattaaataacatgtatt 281  Q
    |||||||||||||||||||||||    
T  6402985 cctgtaattaaataacatgtatt 6403007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 158 - 281
Target Start/End: Complemental strand, 16406215 - 16406092
Alignment:
Q  158 gaaataaaagaggtttatcattttatcaacaaaagtgcaatttaaaatagggttattaattgaaactgaccacgtaatatacgtgaagtctaaaaattga 257  Q
    |||||||||||||||||||||||| | ||||||||| |||||||||||||||||||||||||||| |||||| |||||||||||||||||| |||||| |    
T  16406215 gaaataaaagaggtttatcattttgttaacaaaagtacaatttaaaatagggttattaattgaaattgaccatgtaatatacgtgaagtctgaaaattca 16406116  T
Q  258 ccctgtaattaaataacatgtatt 281  Q
    || |||||||||||||||||||||    
T  16406115 ccatgtaattaaataacatgtatt 16406092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 158 - 281
Target Start/End: Original strand, 31580817 - 31580940
Alignment:
Q  158 gaaataaaagaggtttatcattttatcaacaaaagtgcaatttaaaatagggttattaattgaaactgaccacgtaatatacgtgaagtctaaaaattga 257  Q
    |||||||| ||||||||||||||  ||||||||| | |||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||     
T  31580817 gaaataaaggaggtttatcatttcgtcaacaaaaatacaatttaaaatagggttattaattgaaattgaccacgtaatatacgtgaagtctgaaaattgt 31580916  T
Q  258 ccctgtaattaaataacatgtatt 281  Q
    ||||||||||||||||||||||||    
T  31580917 ccctgtaattaaataacatgtatt 31580940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 158 - 281
Target Start/End: Original strand, 32126269 - 32126392
Alignment:
Q  158 gaaataaaagaggtttatcattttatcaacaaaagtgcaatttaaaatagggttattaattgaaactgaccacgtaatatacgtgaagtctaaaaattga 257  Q
    |||||||||||| ||||||||||| ||||||||||| || ||||||||||||||||||||||||| ||| ||||||||||||||||||||| ||||||||    
T  32126269 gaaataaaagagatttatcattttgtcaacaaaagtacagtttaaaatagggttattaattgaaattgatcacgtaatatacgtgaagtctgaaaattga 32126368  T
Q  258 ccctgtaattaaataacatgtatt 281  Q
    ||| ||||||||||||||||||||    
T  32126369 ccccgtaattaaataacatgtatt 32126392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 158 - 281
Target Start/End: Complemental strand, 35963775 - 35963653
Alignment:
Q  158 gaaataaaagaggtttatcattttatcaacaaaagtgcaatttaaaatagggttattaattgaaactgaccacgtaatatacgtgaagtctaaaaattga 257  Q
    ||||||||||||||| |||||||| ||||||||||| ||| |||||||||||||||||||||||| |||| |||||||||||||||||||| ||||||||    
T  35963775 gaaataaaagaggtt-atcattttgtcaacaaaagtacaacttaaaatagggttattaattgaaattgacaacgtaatatacgtgaagtctgaaaattga 35963677  T
Q  258 ccctgtaattaaataacatgtatt 281  Q
    ||||||||||||||||||||||||    
T  35963676 ccctgtaattaaataacatgtatt 35963653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 158 - 281
Target Start/End: Complemental strand, 771820 - 771697
Alignment:
Q  158 gaaataaaagaggtttatcattttatcaacaaaagtgcaatttaaaatagggttattaattgaaactgaccacgtaatatacgtgaagtctaaaaattga 257  Q
    |||||||||||||||||||||||| ||||||||| | |||||||||||||||||||||||||||| |||||| |||||||| ||||||||  ||||||||    
T  771820 gaaataaaagaggtttatcattttgtcaacaaaaatacaatttaaaatagggttattaattgaaattgaccatgtaatataagtgaagtcggaaaattga 771721  T
Q  258 ccctgtaattaaataacatgtatt 281  Q
    || |||||||||||||||||||||    
T  771720 ccatgtaattaaataacatgtatt 771697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 156 - 282
Target Start/End: Complemental strand, 45419670 - 45419544
Alignment:
Q  156 ttgaaataaaagaggtttatcattttatcaacaaaagtgcaatttaaaatagggttattaattgaaactgaccacgtaatatacgtgaagtctaaaaatt 255  Q
    |||||||||||||||||||||||||| |||| |||| | |||||||||||||| ||||||||| ||| |||||| |||||||| ||||||||||||||||    
T  45419670 ttgaaataaaagaggtttatcattttgtcaataaaactacaatttaaaataggattattaattaaaattgaccatgtaatatatgtgaagtctaaaaatt 45419571  T
Q  256 gaccctgtaattaaataacatgtattt 282  Q
    | || ||||||||||||||||||||||    
T  45419570 ggccatgtaattaaataacatgtattt 45419544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 158 - 281
Target Start/End: Complemental strand, 2286986 - 2286870
Alignment:
Q  158 gaaataaaagaggtttatcattttatcaacaaaagtgcaatttaaaatagggttattaattgaaactgaccacgtaatatacgtgaagtctaaaaattga 257  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||       ||||||| | ||||||||    
T  2286986 gaaataaaagaggtttatcattttgtcaacaaaagtgcaatttaaaatagggttattaattgaaattgaccacgt-------gtgaagtatgaaaattga 2286894  T
Q  258 ccctgtaattaaataacatgtatt 281  Q
    ||||||||||||||||||||||||    
T  2286893 ccctgtaattaaataacatgtatt 2286870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 156 - 282
Target Start/End: Original strand, 8058422 - 8058548
Alignment:
Q  156 ttgaaataaaagaggtttatcattttatcaacaaaagtgcaatttaaaatagggttattaattgaaactgaccacgtaatatacgtgaagtctaaaaatt 255  Q
    |||||||||||||||||||||||||| ||||||| ||| |||||||||||||| ||||||||||||| ||| || |||||||| ||||||||| ||||||    
T  8058422 ttgaaataaaagaggtttatcattttgtcaacaatagtacaatttaaaataggattattaattgaaattgatcatgtaatatatgtgaagtctgaaaatt 8058521  T
Q  256 gaccctgtaattaaataacatgtattt 282  Q
    |  | ||||||||||||||||||||||    
T  8058522 ggtcttgtaattaaataacatgtattt 8058548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 159 - 281
Target Start/End: Original strand, 7071611 - 7071733
Alignment:
Q  159 aaataaaagaggtttatcattttatcaacaaaagtgcaatttaaaatagggttattaattgaaactgaccacgtaatatacgtgaagtct-aaaaattga 257  Q
    ||||||||||||||  ||||||| |||||| |||| ||||||||||||   ||||||||||||| ||||||  ||||||||||||||||| |||||||||    
T  7071611 aaataaaagaggttcctcattttgtcaacagaagtacaatttaaaataaatttattaattgaaattgacca-ttaatatacgtgaagtctgaaaaattga 7071709  T
Q  258 ccctgtaattaaataacatgtatt 281  Q
    |||| |||||||||||||||||||    
T  7071710 ccctataattaaataacatgtatt 7071733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 31 - 118
Target Start/End: Complemental strand, 35963889 - 35963802
Alignment:
Q  31 acagtggcggagccaggaaatttatggaacccgagcaaaaacttaatcgtaaattcacatgtgacataatatataaacaatcataaat 118  Q
    |||||||||||| ||||||||||||||| ||||||| |||| ||||||||||||||||||| || |||||||||||||||||||||||    
T  35963889 acagtggcggagtcaggaaatttatggagcccgagcgaaaaattaatcgtaaattcacatgcgatataatatataaacaatcataaat 35963802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 32 - 118
Target Start/End: Original strand, 6402768 - 6402854
Alignment:
Q  32 cagtggcggagccaggaaatttatggaacccgagcaaaaacttaatcgtaaattcacatgtgacataatatataaacaatcataaat 118  Q
    ||||||||||||||||||||||||||| || | || |||| ||||||||||||||||||||||||||||||||||||| ||||||||    
T  6402768 cagtggcggagccaggaaatttatggagcctgggcgaaaaattaatcgtaaattcacatgtgacataatatataaacagtcataaat 6402854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 158 - 281
Target Start/End: Complemental strand, 26238701 - 26238577
Alignment:
Q  158 gaaataaaagaggtttatcattttatcaacaaaagtgcaatttaaaatagggttattaattgaaactgaccacgtaatatacgtgaagtct-aaaaattg 256  Q
    |||||||||||||||  ||||||  |||| |||||| |||||||||||||||||||||||||||| |||||| |||||||||  ||||| | |||| |||    
T  26238701 gaaataaaagaggttcctcatttcgtcaagaaaagtacaatttaaaatagggttattaattgaaattgaccatgtaatatacacgaagtttgaaaatttg 26238602  T
Q  257 accctgtaattaaataacatgtatt 281  Q
    ||| | |||||||||||||||||||    
T  26238601 accatataattaaataacatgtatt 26238577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 32 - 119
Target Start/End: Original strand, 41250588 - 41250675
Alignment:
Q  32 cagtggcggagccaggaaatttatggaacccgagcaaaaacttaatcgtaaattcacatgtgacataatatataaacaatcataaatt 119  Q
    ||||||||||||||| ||||||||||| || | || |||| ||||||||||||||||||||||||||||||||||||| |||||||||    
T  41250588 cagtggcggagccagaaaatttatggagcctgggcgaaaaattaatcgtaaattcacatgtgacataatatataaacagtcataaatt 41250675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 32 - 118
Target Start/End: Original strand, 17443987 - 17444073
Alignment:
Q  32 cagtggcggagccaggaaatttatggaacccgagcaaaaacttaatcgtaaattcacatgtgacataatatataaacaatcataaat 118  Q
    ||||||||||||||| |||||||||||  | | ||||||| ||||||||||||||||||||||||||||||||||||| ||||||||    
T  17443987 cagtggcggagccagcaaatttatggagtctgggcaaaaaattaatcgtaaattcacatgtgacataatatataaacagtcataaat 17444073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 32 - 118
Target Start/End: Original strand, 26161698 - 26161784
Alignment:
Q  32 cagtggcggagccaggaaatttatggaacccgagcaaaaacttaatcgtaaattcacatgtgacataatatataaacaatcataaat 118  Q
    ||||||||||||||||||||||||||| |||| ||||||| || |||| |||||||||||||| |||||||||||||||| ||||||    
T  26161698 cagtggcggagccaggaaatttatggagcccgggcaaaaaatttatcgcaaattcacatgtgagataatatataaacaattataaat 26161784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 32 - 118
Target Start/End: Original strand, 31580687 - 31580773
Alignment:
Q  32 cagtggcggagccaggaaatttatggaacccgagcaaaaacttaatcgtaaattcacatgtgacataatatataaacaatcataaat 118  Q
    ||||||||||||||| ||||||||||| |||| ||||||| |||||| |||| ||| ||||||||||||||||||||||||||||||    
T  31580687 cagtggcggagccagaaaatttatggagcccgggcaaaaaattaatcataaactcatatgtgacataatatataaacaatcataaat 31580773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 32 - 121
Target Start/End: Complemental strand, 16406326 - 16406237
Alignment:
Q  32 cagtggcggagccaggaaatttatggaacccgagcaaaaacttaatcgtaaattcacatgtgacataatatataaacaatcataaattga 121  Q
    ||||||||||| ||| |||||||||||  |||  |||||| |||||||||||||||||||||| |||||||||||||| |||||||||||    
T  16406326 cagtggcggagtcagaaaatttatggagtccggacaaaaaattaatcgtaaattcacatgtgatataatatataaacagtcataaattga 16406237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 35 - 122
Target Start/End: Complemental strand, 18982740 - 18982653
Alignment:
Q  35 tggcggagccaggaaatttatggaacccgagcaaaaacttaatcgtaaattcacatgtgacataatatataaacaatcataaattgaa 122  Q
    |||||||| ||| ||||||||||| || | ||||||| | ||||||||||||||||| ||||||||||||||||| ||||||||||||    
T  18982740 tggcggagtcagaaaatttatggagcctgggcaaaaaataaatcgtaaattcacatgcgacataatatataaacagtcataaattgaa 18982653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 32 - 123
Target Start/End: Complemental strand, 42443188 - 42443097
Alignment:
Q  32 cagtggcggagccaggaaatttatggaacccgagcaaaaacttaatcgtaaattcacatgtgacataatatataaacaatcataaattgaaa 123  Q
    ||||||||||| |||||||||||||||   ||  |||||| |||||||||||||||||||||| |||||||||||||| |||||||| ||||    
T  42443188 cagtggcggagtcaggaaatttatggagttcggacaaaaaattaatcgtaaattcacatgtgatataatatataaacagtcataaatcgaaa 42443097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 156 - 222
Target Start/End: Original strand, 26161812 - 26161878
Alignment:
Q  156 ttgaaataaaagaggtttatcattttatcaacaaaagtgcaatttaaaatagggttattaattgaaa 222  Q
    ||||||||||| |||||||||||||| |||| |||||| ||||||||||||||||||||||||||||    
T  26161812 ttgaaataaaataggtttatcattttgtcaataaaagtacaatttaaaatagggttattaattgaaa 26161878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 32 - 123
Target Start/End: Complemental strand, 26238789 - 26238698
Alignment:
Q  32 cagtggcggagccaggaaatttatggaacccgagcaaaaacttaatcgtaaattcacatgtgacataatatataaacaatcataaattgaaa 123  Q
    ||||||||||||||| ||||||||||| |||| |||||||   | ||| ||||||||||| ||||||||||||||||| |||||||| ||||    
T  26238789 cagtggcggagccagaaaatttatggagcccgggcaaaaaaaaattcgcaaattcacatgcgacataatatataaacagtcataaatcgaaa 26238698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 33 - 123
Target Start/End: Original strand, 32126182 - 32126272
Alignment:
Q  33 agtggcggagccaggaaatttatggaacccgagcaaaaacttaatcgtaaattcacatgtgacataatatataaacaatcataaattgaaa 123  Q
    |||||||||||||| ||||||||||| | || ||||||| |||||  ||||||||||||||| |||| ||||||||| |||||||| ||||    
T  32126182 agtggcggagccagaaaatttatggagctcgggcaaaaaattaattctaaattcacatgtgatataaaatataaacagtcataaatcgaaa 32126272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 33 - 118
Target Start/End: Complemental strand, 2287114 - 2287029
Alignment:
Q  33 agtggcggagccaggaaatttatggaacccgagcaaaaacttaatcgtaaattcacatgtgacataatatataaacaatcataaat 118  Q
    |||||||||| |||||||||||||||   || ||||||| |||||| ||||||||||||||||||| |||||||||| | ||||||    
T  2287114 agtggcggagtcaggaaatttatggagttcgggcaaaaaattaatcataaattcacatgtgacatactatataaacagttataaat 2287029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 35 - 118
Target Start/End: Original strand, 17090226 - 17090309
Alignment:
Q  35 tggcggagccaggaaatttatggaacccgagcaaaaacttaatcgtaaattcacatgtgacataatatataaacaatcataaat 118  Q
    |||| |||||||||||||||||||  ||| ||||||| || ||||||||||||||| ||||||||||||| || | ||||||||    
T  17090226 tggcagagccaggaaatttatggagtccgggcaaaaaatttatcgtaaattcacatatgacataatatatcaatagtcataaat 17090309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 33 - 123
Target Start/End: Original strand, 4554296 - 4554386
Alignment:
Q  33 agtggcggagccaggaaatttatggaacccgagcaaaaacttaatcgtaaattcacatgtgacataatatataaacaatcataaattgaaa 123  Q
    ||||||||||| ||||||||||||||  | | ||||||| || |||||||||| | ||||||||||||||||||| | |||||||| ||||    
T  4554296 agtggcggagctaggaaatttatggagtctgggcaaaaaatttatcgtaaatttagatgtgacataatatataaatagtcataaatcgaaa 4554386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 32 - 118
Target Start/End: Original strand, 17035712 - 17035798
Alignment:
Q  32 cagtggcggagccaggaaatttatggaacccgagcaaaaacttaatcgtaaattcacatgtgacataatatataaacaatcataaat 118  Q
    ||||||| ||| |||||||||||||||  ||| ||||||| || ||||||||||||||| ||||||||||||| || | ||||||||    
T  17035712 cagtggcagagtcaggaaatttatggagtccgggcaaaaagtttatcgtaaattcacatatgacataatatatcaatagtcataaat 17035798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 168 - 237
Target Start/End: Original strand, 4554394 - 4554463
Alignment:
Q  168 aggtttatcattttatcaacaaaagtgcaatttaaaatagggttattaattgaaactgaccacgtaatat 237  Q
    |||||| ||||||| ||||||||| | |||||||||||| ||||||||||||||| |||||| |||||||    
T  4554394 aggtttctcattttgtcaacaaaaatacaatttaaaatatggttattaattgaaattgaccatgtaatat 4554463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 31 - 116
Target Start/End: Original strand, 7071521 - 7071606
Alignment:
Q  31 acagtggcggagccaggaaatttatggaacccgagcaaaaacttaatcgtaaattcacatgtgacataatatataaacaatcataa 116  Q
    |||||| |||||||||  |||||||||| ||||  |||||| || |||| ||||||||||||||||||||| ||||||| ||||||    
T  7071521 acagtgtcggagccagagaatttatggagcccggccaaaaattttatcgcaaattcacatgtgacataatacataaacagtcataa 7071606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 45 - 123
Target Start/End: Original strand, 8058317 - 8058395
Alignment:
Q  45 aggaaatttatggaacccgagcaaaaacttaatcgtaaattcacatgtgacataatatataaacaatcataaattgaaa 123  Q
    |||||||||||||| || | ||||||| || |||| |||||||||||| ||||||||||| |||| |||||||| ||||    
T  8058317 aggaaatttatggagcctgggcaaaaaatttatcgcaaattcacatgttacataatatatcaacagtcataaatcgaaa 8058395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 65 - 123
Target Start/End: Complemental strand, 45122277 - 45122219
Alignment:
Q  65 gcaaaaacttaatcgtaaattcacatgtgacataatatataaacaatcataaattgaaa 123  Q
    ||||||| || |||| |||||||||||||| |||||||||||||| |||||||||||||    
T  45122277 gcaaaaaatttatcgcaaattcacatgtgatataatatataaacagtcataaattgaaa 45122219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 31 - 103
Target Start/End: Complemental strand, 772341 - 772269
Alignment:
Q  31 acagtggcggagccaggaaatttatggaacccgagcaaaaacttaatcgtaaattcacatgtgacataatata 103  Q
    |||| ||||||||||||||||||||||| |||| |||||||  | |||| |||||||||| ||| ||||||||    
T  772341 acagcggcggagccaggaaatttatggagcccgggcaaaaaaattatcgcaaattcacatatgaaataatata 772269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 34 - 105
Target Start/End: Original strand, 26655688 - 26655759
Alignment:
Q  34 gtggcggagccaggaaatttatggaacccgagcaaaaacttaatcgtaaattcacatgtgacataatatata 105  Q
    ||||||||||||  || ||||| || || | ||||||| || ||||||||||||||||||||||||||||||    
T  26655688 gtggcggagccaaaaattttatagagcctgggcaaaaaatttatcgtaaattcacatgtgacataatatata 26655759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 156 - 205
Target Start/End: Original strand, 12755935 - 12755984
Alignment:
Q  156 ttgaaataaaagaggtttatcattttatcaacaaaagtgcaatttaaaat 205  Q
    |||||||||||||||||||||||||| |||| |||| | |||||||||||    
T  12755935 ttgaaataaaagaggtttatcattttgtcaataaaactacaatttaaaat 12755984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 33 - 105
Target Start/End: Original strand, 18425814 - 18425886
Alignment:
Q  33 agtggcggagccaggaaatttatggaacccgagcaaaaacttaatcgtaaattcacatgtgacataatatata 105  Q
    |||||||||| |||||| ||||| ||||  | |||||||  | |||| |||||||||||||||||||||||||    
T  18425814 agtggcggagtcaggaattttatagaacttgggcaaaaaaattatcgcaaattcacatgtgacataatatata 18425886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 158 - 206
Target Start/End: Original strand, 26656288 - 26656336
Alignment:
Q  158 gaaataaaagaggtttatcattttatcaacaaaagtgcaatttaaaata 206  Q
    |||||||||||||| | ||||||| ||||||||||| ||||||||||||    
T  26656288 gaaataaaagaggtatgtcattttgtcaacaaaagtacaatttaaaata 26656336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 65 - 105
Target Start/End: Original strand, 35649567 - 35649607
Alignment:
Q  65 gcaaaaacttaatcgtaaattcacatgtgacataatatata 105  Q
    ||||||| ||||||| |||||||||||||||||||||||||    
T  35649567 gcaaaaatttaatcgcaaattcacatgtgacataatatata 35649607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 156 - 212
Target Start/End: Complemental strand, 45122224 - 45122168
Alignment:
Q  156 ttgaaataaaagaggtttatcattttatcaacaaaagtgcaatttaaaatagggtta 212  Q
    ||||||||| ||| |||| ||||||||||||||||||| ||  ||||||||||||||    
T  45122224 ttgaaataatagaagtttctcattttatcaacaaaagtacatattaaaatagggtta 45122168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 79 - 118
Target Start/End: Original strand, 33453094 - 33453133
Alignment:
Q  79 gtaaattcacatgtgacataatatataaacaatcataaat 118  Q
    |||||||||||||||| |||||||||||| ||||||||||    
T  33453094 gtaaattcacatgtgagataatatataaataatcataaat 33453133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 27 - 105
Target Start/End: Original strand, 42755565 - 42755643
Alignment:
Q  27 agacacagtggcggagccaggaaatttatggaacccgagcaaaaacttaatcgtaaattcacatgtgacataatatata 105  Q
    ||||| ||||||||||||||||| | ||| || || | || |||| || |||| |||||||||||||| ||||||||||    
T  42755565 agacatagtggcggagccaggaattatatagagcctgggcgaaaaatttatcgcaaattcacatgtgatataatatata 42755643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 76 - 105
Target Start/End: Original strand, 40653808 - 40653837
Alignment:
Q  76 atcgtaaattcacatgtgacataatatata 105  Q
    ||||||||||||||||||||||||||||||    
T  40653808 atcgtaaattcacatgtgacataatatata 40653837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 158 - 198
Target Start/End: Original strand, 17035842 - 17035882
Alignment:
Q  158 gaaataaaagaggtttatcattttatcaacaaaagtgcaat 198  Q
    |||||||||||||||| ||||||| ||||||||||| ||||    
T  17035842 gaaataaaagaggtttctcattttgtcaacaaaagtacaat 17035882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 158 - 198
Target Start/End: Original strand, 17090350 - 17090390
Alignment:
Q  158 gaaataaaagaggtttatcattttatcaacaaaagtgcaat 198  Q
    |||||||||||||||| ||||||| ||||||||||| ||||    
T  17090350 gaaataaaagaggtttctcattttgtcaacaaaagtacaat 17090390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 78 - 118
Target Start/End: Complemental strand, 31393065 - 31393025
Alignment:
Q  78 cgtaaattcacatgtgacataatatataaacaatcataaat 118  Q
    |||||||| ||||||||||||||||||||| | ||||||||    
T  31393065 cgtaaatttacatgtgacataatatataaatagtcataaat 31393025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 104; Significance: 7e-52; HSPs: 15)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 104; E-Value: 7e-52
Query Start/End: Original strand, 158 - 281
Target Start/End: Original strand, 34947907 - 34948030
Alignment:
Q  158 gaaataaaagaggtttatcattttatcaacaaaagtgcaatttaaaatagggttattaattgaaactgaccacgtaatatacgtgaagtctaaaaattga 257  Q
    |||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||    
T  34947907 gaaataaaagaggtttatcattttgtcaacaaaagtacaatttaaaatagggttattaattgaaattgaccacgtaatatacgtgaagtctgaaaattga 34948006  T
Q  258 ccctgtaattaaataacatgtatt 281  Q
    || |||||||||||||||||||||    
T  34948007 ccatgtaattaaataacatgtatt 34948030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 159 - 281
Target Start/End: Complemental strand, 13838884 - 13838762
Alignment:
Q  159 aaataaaagaggtttatcattttatcaacaaaagtgcaatttaaaatagggttattaattgaaactgaccacgtaatatacgtgaagtctaaaaattgac 258  Q
    ||||||||||| ||||||||||||||||||||| | |||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||    
T  13838884 aaataaaagagatttatcattttatcaacaaaaatacaatttaaaatagggttattaattgaaattgaccacgtaatatacgtgaagtctgaaaattgac 13838785  T
Q  259 cctgtaattaaataacatgtatt 281  Q
    | |||||||||||||||||||||    
T  13838784 catgtaattaaataacatgtatt 13838762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 159 - 281
Target Start/End: Complemental strand, 399703 - 399581
Alignment:
Q  159 aaataaaagaggtttatcattttatcaacaaaagtgcaatttaaaatagggttattaattgaaactgaccacgtaatatacgtgaagtctaaaaattgac 258  Q
    ||||||| || |||||||||||||||||||||||| |||||||||||||||||||||||| ||| | ||||||||||||||||||||||| |||||||||    
T  399703 aaataaatgaagtttatcattttatcaacaaaagtacaatttaaaatagggttattaatttaaattaaccacgtaatatacgtgaagtctgaaaattgac 399604  T
Q  259 cctgtaattaaataacatgtatt 281  Q
    |||||||||||||||||||||||    
T  399603 cctgtaattaaataacatgtatt 399581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 158 - 281
Target Start/End: Complemental strand, 29744356 - 29744232
Alignment:
Q  158 gaaataaaagaggtttatcattttatcaacaaaagtgcaatttaaaatagggttattaattgaaactgaccacgtaatatacgtgaagtctaaaaattga 257  Q
    |||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||| | |||||| |||||||||||||||||| ||||||||    
T  29744356 gaaataaaagaggtttatcattttgtcaacaaaagtacaatttaaaatagggttattaattgagattgaccatgtaatatacgtgaagtctgaaaattga 29744257  T
Q  258 ccctgt-aattaaataacatgtatt 281  Q
    || ||| |||||||| |||||||||    
T  29744256 ccttgtaaattaaatcacatgtatt 29744232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 158 - 281
Target Start/End: Original strand, 33228432 - 33228556
Alignment:
Q  158 gaaataaaagaggtttatcattttatcaacaaaagtgcaatttaaaatagggttattaattgaaactgaccacgtaatatacgtgaagtctaaaaattga 257  Q
    ||||||||||| |||||||||||| ||||||||||| |||||||||||||||||||||||||||| |||||| |||||||||||||||||| ||||||||    
T  33228432 gaaataaaagatgtttatcattttgtcaacaaaagtacaatttaaaatagggttattaattgaaattgaccatgtaatatacgtgaagtctgaaaattga 33228531  T
Q  258 ccctgt-aattaaataacatgtatt 281  Q
    || ||| |||||||| |||||||||    
T  33228532 ccttgtaaattaaatcacatgtatt 33228556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 156 - 282
Target Start/End: Complemental strand, 28997817 - 28997691
Alignment:
Q  156 ttgaaataaaagaggtttatcattttatcaacaaaagtgcaatttaaaatagggttattaattgaaactgaccacgtaatatacgtgaagtctaaaaatt 255  Q
    |||||||||||||||||||||||||| |||| |||| |  ||||||||||||| ||||||||| ||| |||||| |||||||| ||||||||| ||||||    
T  28997817 ttgaaataaaagaggtttatcattttgtcaataaaactataatttaaaataggattattaattaaaattgaccatgtaatatatgtgaagtctgaaaatt 28997718  T
Q  256 gaccctgtaattaaataacatgtattt 282  Q
    | |||||||||||||||||||||||||    
T  28997717 ggccctgtaattaaataacatgtattt 28997691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 158 - 281
Target Start/End: Original strand, 31028035 - 31028159
Alignment:
Q  158 gaaataaaagaggtttatcattttatcaacaaaagtgcaatttaaaatagggttattaattgaaactgaccacgtaatatacgtgaagtct-aaaaattg 256  Q
    |||||||||||||||  | ||||| ||||||||||| |||||||||||| || |||||||||||| |||||| |||||||||||||||||| |||||| |    
T  31028035 gaaataaaagaggttccttattttgtcaacaaaagtacaatttaaaatatggctattaattgaaattgaccatgtaatatacgtgaagtctgaaaaatcg 31028134  T
Q  257 accctgtaattaaataacatgtatt 281  Q
    || |||||||||||||| |||||||    
T  31028135 acgctgtaattaaataatatgtatt 31028159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 37 - 118
Target Start/End: Original strand, 34947798 - 34947879
Alignment:
Q  37 gcggagccaggaaatttatggaacccgagcaaaaacttaatcgtaaattcacatgtgacataatatataaacaatcataaat 118  Q
    |||||||||||||||||||||| |||| || |||| |||||||||||||||||||||| |||||||||||||||||||||||    
T  34947798 gcggagccaggaaatttatggagcccgggcgaaaaattaatcgtaaattcacatgtgatataatatataaacaatcataaat 34947879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 31 - 118
Target Start/End: Complemental strand, 399820 - 399733
Alignment:
Q  31 acagtggcggagccaggaaatttatggaacccgagcaaaaacttaatcgtaaattcacatgtgacataatatataaacaatcataaat 118  Q
    |||||||||||||||||||||||||||| |  | || |||| |||||||||||||||||||||| |||||||||||||| ||||||||    
T  399820 acagtggcggagccaggaaatttatggagcttgggcgaaaaattaatcgtaaattcacatgtgatataatatataaacagtcataaat 399733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 188 - 259
Target Start/End: Complemental strand, 34253186 - 34253115
Alignment:
Q  188 aaaagtgcaatttaaaatagggttattaattgaaactgaccacgtaatatacgtgaagtctaaaaattgacc 259  Q
    |||||| |||||||||||||||||||||||||||| | | ||||||||||||||||||||| ||||||||||    
T  34253186 aaaagtacaatttaaaatagggttattaattgaaattaatcacgtaatatacgtgaagtctgaaaattgacc 34253115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 32 - 118
Target Start/End: Complemental strand, 29744478 - 29744394
Alignment:
Q  32 cagtggcggagccaggaaatttatggaacccgagcaaaaacttaatcgtaaattcacatgtgacataatatataaacaatcataaat 118  Q
    ||||||||||||||||||||||||||| |||| || |||| || || | || ||||||||||||  |||||||||||| ||||||||    
T  29744478 cagtggcggagccaggaaatttatggagcccgggcgaaaaatttattgcaacttcacatgtgac--aatatataaacagtcataaat 29744394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 33 - 107
Target Start/End: Complemental strand, 34253314 - 34253241
Alignment:
Q  33 agtggcggagccaggaaatttatggaacccgagcaaaaacttaatcgtaaattcacatgtgacataatatataaa 107  Q
    ||||||||||||||||||||| ||||  | | | ||||| ||||| |||||||||||||||||||||||||||||    
T  34253314 agtggcggagccaggaaatttgtggattcag-gtaaaaaattaattgtaaattcacatgtgacataatatataaa 34253241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 31 - 118
Target Start/End: Original strand, 33228297 - 33228382
Alignment:
Q  31 acagtggcggagccaggaaatttatggaacccgagcaaaaacttaatcgtaaattcacatgtgacataatatataaacaatcataaat 118  Q
    |||||||||||||||||||||||||||| |||  || || | || ||| |||||||||| |||||  |||||||||||| ||||||||    
T  33228297 acagtggcggagccaggaaatttatggatcccaggcgaacaatttatcataaattcacacgtgac--aatatataaacagtcataaat 33228382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 51 - 106
Target Start/End: Complemental strand, 24074711 - 24074656
Alignment:
Q  51 tttatggaacccgagcaaaaacttaatcgtaaattcacatgtgacataatatataa 106  Q
    ||||| || |||| || |||| || |||||||||||||||||||||||||||||||    
T  24074711 tttatagagcccgggcgaaaaatttatcgtaaattcacatgtgacataatatataa 24074656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 81 - 118
Target Start/End: Complemental strand, 11971226 - 11971189
Alignment:
Q  81 aaattcacatgtgacataatatataaacaatcataaat 118  Q
    ||||||||||||||||||||||||||| | ||||||||    
T  11971226 aaattcacatgtgacataatatataaatagtcataaat 11971189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 104; Significance: 7e-52; HSPs: 43)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 104; E-Value: 7e-52
Query Start/End: Original strand, 158 - 281
Target Start/End: Complemental strand, 13819063 - 13818940
Alignment:
Q  158 gaaataaaagaggtttatcattttatcaacaaaagtgcaatttaaaatagggttattaattgaaactgaccacgtaatatacgtgaagtctaaaaattga 257  Q
    |||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||    
T  13819063 gaaataaaagaggtttatcattttgtcaacaaaagtacaatttaaaatagggttattaattgaaattgactacgtaatatacgtgaagtctaaaaattga 13818964  T
Q  258 ccctgtaattaaataacatgtatt 281  Q
    || |||||||||||||||||||||    
T  13818963 ccatgtaattaaataacatgtatt 13818940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 104; E-Value: 7e-52
Query Start/End: Original strand, 158 - 281
Target Start/End: Complemental strand, 16155977 - 16155854
Alignment:
Q  158 gaaataaaagaggtttatcattttatcaacaaaagtgcaatttaaaatagggttattaattgaaactgaccacgtaatatacgtgaagtctaaaaattga 257  Q
    |||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||| ||||||| ||||||||||||||||| ||||||||    
T  16155977 gaaataaaagaggtttatcattttgtcaacaaaagtacaatttaaaatagggttattaattgaaattgaccacataatatacgtgaagtctgaaaattga 16155878  T
Q  258 ccctgtaattaaataacatgtatt 281  Q
    ||||||||||||||||||||||||    
T  16155877 ccctgtaattaaataacatgtatt 16155854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 104; E-Value: 7e-52
Query Start/End: Original strand, 158 - 281
Target Start/End: Original strand, 16332981 - 16333104
Alignment:
Q  158 gaaataaaagaggtttatcattttatcaacaaaagtgcaatttaaaatagggttattaattgaaactgaccacgtaatatacgtgaagtctaaaaattga 257  Q
    |||||||||||||||||||||||| ||||||||| | |||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||    
T  16332981 gaaataaaagaggtttatcattttgtcaacaaaattacaatttaaaatagggttattaattgaaattgaccacgtaatatacgtgaagtctgaaaattga 16333080  T
Q  258 ccctgtaattaaataacatgtatt 281  Q
    ||||||||||||||||||||||||    
T  16333081 ccctgtaattaaataacatgtatt 16333104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 104; E-Value: 7e-52
Query Start/End: Original strand, 158 - 281
Target Start/End: Original strand, 39656608 - 39656731
Alignment:
Q  158 gaaataaaagaggtttatcattttatcaacaaaagtgcaatttaaaatagggttattaattgaaactgaccacgtaatatacgtgaagtctaaaaattga 257  Q
    |||||||||||||||||||||||| ||||||||| | |||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||    
T  39656608 gaaataaaagaggtttatcattttgtcaacaaaaatacaatttaaaatagggttattaattgaaattgaccacgtaatatacgtgaagtctgaaaattga 39656707  T
Q  258 ccctgtaattaaataacatgtatt 281  Q
    ||||||||||||||||||||||||    
T  39656708 ccctgtaattaaataacatgtatt 39656731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 159 - 281
Target Start/End: Original strand, 36292702 - 36292824
Alignment:
Q  159 aaataaaagaggtttatcattttatcaacaaaagtgcaatttaaaatagggttattaattgaaactgaccacgtaatatacgtgaagtctaaaaattgac 258  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| | |||||||||||||| |||||||| |||||||||    
T  36292702 aaataaaagaggtttatcattttatcaacaaaagtacaatttaaaatagggttattaattgaaattaaccacgtaatatacttgaagtctgaaaattgac 36292801  T
Q  259 cctgtaattaaataacatgtatt 281  Q
    |||||||||||||||||||||||    
T  36292802 cctgtaattaaataacatgtatt 36292824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 159 - 275
Target Start/End: Complemental strand, 39435785 - 39435669
Alignment:
Q  159 aaataaaagaggtttatcattttatcaacaaaagtgcaatttaaaatagggttattaattgaaactgaccacgtaatatacgtgaagtctaaaaattgac 258  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||| |    
T  39435785 aaataaaagaggtttatcattttatcaacaaaagtacaatttaaaatagggttattaattgaaattgaccacgtaatatacgtgaagtctgaaaattgtc 39435686  T
Q  259 cctgtaattaaataaca 275  Q
    |||||||||||||||||    
T  39435685 cctgtaattaaataaca 39435669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 158 - 281
Target Start/End: Complemental strand, 19986530 - 19986407
Alignment:
Q  158 gaaataaaagaggtttatcattttatcaacaaaagtgcaatttaaaatagggttattaattgaaactgaccacgtaatatacgtgaagtctaaaaattga 257  Q
    |||||||||||||||||||||||| |||||||| || |||||||||||||| ||||||||||||| ||||||||||||||||||||||||| ||||||||    
T  19986530 gaaataaaagaggtttatcattttgtcaacaaacgtacaatttaaaataggattattaattgaaattgaccacgtaatatacgtgaagtctgaaaattga 19986431  T
Q  258 ccctgtaattaaataacatgtatt 281  Q
    ||||||||||||||||||||||||    
T  19986430 ccctgtaattaaataacatgtatt 19986407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 158 - 281
Target Start/End: Complemental strand, 10036993 - 10036870
Alignment:
Q  158 gaaataaaagaggtttatcattttatcaacaaaagtgcaatttaaaatagggttattaattgaaactgaccacgtaatatacgtgaagtctaaaaattga 257  Q
    |||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||| ||||||||||||| | ||||||||| |||||| |    
T  10036993 gaaataaaagaggtttatcattttgtcaacaaaagtacaatttaaaatagggttattaattgaaattgaccacgtaatacatgtgaagtctgaaaattca 10036894  T
Q  258 ccctgtaattaaataacatgtatt 281  Q
    ||||||||||||||||||||||||    
T  10036893 ccctgtaattaaataacatgtatt 10036870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 159 - 281
Target Start/End: Original strand, 26282399 - 26282521
Alignment:
Q  159 aaataaaagaggtttatcattttatcaacaaaagtgcaatttaaaatagggttattaattgaaactgaccacgtaatatacgtgaagtctaaaaattgac 258  Q
    ||||||| || |||||||||||||||||||||||| |||||||||||||||||||||||| ||| | ||||||||||||||||||||||| |||||||||    
T  26282399 aaataaatgaagtttatcattttatcaacaaaagtacaatttaaaatagggttattaatttaaattaaccacgtaatatacgtgaagtctgaaaattgac 26282498  T
Q  259 cctgtaattaaataacatgtatt 281  Q
    |||||||||||||||||||||||    
T  26282499 cctgtaattaaataacatgtatt 26282521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 158 - 274
Target Start/End: Original strand, 1775459 - 1775575
Alignment:
Q  158 gaaataaaagaggtttatcattttatcaacaaaagtgcaatttaaaatagggttattaattgaaactgaccacgtaatatacgtgaagtctaaaaattga 257  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||| ||||||| ||||||| ||||||||||||||||||||||||| ||||||||    
T  1775459 gaaataaaagaggtttatcattttgtcaacaaaagtgcaatttaaaatatggttattgattgaaattgaccacgtaatatacgtgaagtctgaaaattga 1775558  T
Q  258 ccctgtaattaaataac 274  Q
     ||||||||||||||||    
T  1775559 acctgtaattaaataac 1775575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 156 - 282
Target Start/End: Complemental strand, 28801963 - 28801836
Alignment:
Q  156 ttgaaataaaagaggtttatcattttatcaacaaaagtgcaatttaaaatagggttattaattgaaactgaccacgtaatatacgtgaagtct-aaaaat 254  Q
    |||||||||||||||||  ||||||| ||||||||||| ||||||||||||||||| |||||||||| ||| ||||||||||||||||||||| ||||||    
T  28801963 ttgaaataaaagaggttcctcattttgtcaacaaaagtacaatttaaaatagggtttttaattgaaattgatcacgtaatatacgtgaagtctgaaaaat 28801864  T
Q  255 tgaccctgtaattaaataacatgtattt 282  Q
    ||||| ||||||||||||||||||||||    
T  28801863 tgaccttgtaattaaataacatgtattt 28801836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 159 - 282
Target Start/End: Original strand, 17331078 - 17331201
Alignment:
Q  159 aaataaaagaggtttatcattttatcaacaaaagtgcaatttaaaatagggttattaattgaaactgaccacgtaatatacgtgaagtctaaaaattgac 258  Q
    ||||||||||||||||||||||| |||| |||||| |||||||||||||| ||||||||| ||| |||||| |||||||| ||||||||| |||||||||    
T  17331078 aaataaaagaggtttatcattttgtcaataaaagtacaatttaaaataggattattaattaaaattgaccatgtaatatatgtgaagtctgaaaattgac 17331177  T
Q  259 cctgtaattaaataacatgtattt 282  Q
     |||||||||||||||||||||||    
T  17331178 tctgtaattaaataacatgtattt 17331201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 158 - 281
Target Start/End: Complemental strand, 36292442 - 36292317
Alignment:
Q  158 gaaataaaagaggtttatcattttatcaacaaaagtgcaatttaaaatagggttattaattgaaactgacc-acgtaatatacgtgaagtctaaaaattg 256  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||| ||||| | |||||||||||||||| | |||||||    
T  36292442 gaaataaaagaggtttatcattttatcaacaaaagtacaatttaaaataaggttattaattgaaattgaccaatgtaatatacgtgaagtttgaaaattg 36292343  T
Q  257 accctgt-aattaaataacatgtatt 281  Q
    ||||||| |||||||| |||||||||    
T  36292342 accctgtaaattaaatcacatgtatt 36292317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 156 - 282
Target Start/End: Original strand, 12277934 - 12278060
Alignment:
Q  156 ttgaaataaaagaggtttatcattttatcaacaaaagtgcaatttaaaatagggttattaattgaaactgaccacgtaatatacgtgaagtctaaaaatt 255  Q
    ||||||||||||||| |||||||||| |||| |||||| |||||||||||||| ||||||||| ||| |||||| |||||||| ||||||||| ||||||    
T  12277934 ttgaaataaaagaggattatcattttgtcaataaaagtacaatttaaaataggattattaattaaaattgaccatgtaatatatgtgaagtctgaaaatt 12278033  T
Q  256 gaccctgtaattaaataacatgtattt 282  Q
    | || ||||||||||||||||||||||    
T  12278034 ggccttgtaattaaataacatgtattt 12278060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 156 - 282
Target Start/End: Complemental strand, 31681454 - 31681328
Alignment:
Q  156 ttgaaataaaagaggtttatcattttatcaacaaaagtgcaatttaaaatagggttattaattgaaactgaccacgtaatatacgtgaagtctaaaaatt 255  Q
    |||||||||||||||||||||||||| |||| |||| |  ||||||||||||| ||||||||| ||| |||||| |||||||| ||||||||| ||||||    
T  31681454 ttgaaataaaagaggtttatcattttgtcaataaaactataatttaaaataggattattaattaaaattgaccatgtaatatatgtgaagtctgaaaatt 31681355  T
Q  256 gaccctgtaattaaataacatgtattt 282  Q
    | || ||||||||||||||||||||||    
T  31681354 ggccttgtaattaaataacatgtattt 31681328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 156 - 282
Target Start/End: Complemental strand, 33431408 - 33431282
Alignment:
Q  156 ttgaaataaaagaggtttatcattttatcaacaaaagtgcaatttaaaatagggttattaattgaaactgaccacgtaatatacgtgaagtctaaaaatt 255  Q
    |||||||||||||||||||||||||| |||| |||| |  ||||||||||||| ||||||||| ||| |||||| |||||||| ||||||||| ||||||    
T  33431408 ttgaaataaaagaggtttatcattttgtcaataaaactataatttaaaataggattattaattaaaattgaccatgtaatatatgtgaagtctgaaaatt 33431309  T
Q  256 gaccctgtaattaaataacatgtattt 282  Q
    | || ||||||||||||||||||||||    
T  33431308 ggccttgtaattaaataacatgtattt 33431282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 159 - 247
Target Start/End: Complemental strand, 43069931 - 43069843
Alignment:
Q  159 aaataaaagaggtttatcattttatcaacaaaagtgcaatttaaaatagggttattaattgaaactgaccacgtaatatacgtgaagtc 247  Q
    ||||||||||||||||||||||  ||||||||||| |||||||||||||||||||||||||||| |||||| |||||||||||||||||    
T  43069931 aaataaaagaggtttatcatttagtcaacaaaagtacaatttaaaatagggttattaattgaaattgaccatgtaatatacgtgaagtc 43069843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 32 - 118
Target Start/End: Complemental strand, 39435915 - 39435829
Alignment:
Q  32 cagtggcggagccaggaaatttatggaacccgagcaaaaacttaatcgtaaattcacatgtgacataatatataaacaatcataaat 118  Q
    ||||||||||||||||||||||||||| |||| ||||||| |||||||||||||||||||||| |||||||||||||| ||||||||    
T  39435915 cagtggcggagccaggaaatttatggagcccgggcaaaaaattaatcgtaaattcacatgtgaaataatatataaacagtcataaat 39435829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 31 - 123
Target Start/End: Original strand, 1775330 - 1775422
Alignment:
Q  31 acagtggcggagccaggaaatttatggaacccgagcaaaaacttaatcgtaaattcacatgtgacataatatataaacaatcataaattgaaa 123  Q
    |||||| ||||||||||||||||||||| ||||  |||||| ||||||||||||||||||||||||||||||||||||| |||||||| ||||    
T  1775330 acagtgtcggagccaggaaatttatggagcccggacaaaaaattaatcgtaaattcacatgtgacataatatataaacagtcataaatcgaaa 1775422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 35 - 123
Target Start/End: Complemental strand, 13819176 - 13819088
Alignment:
Q  35 tggcggagccaggaaatttatggaacccgagcaaaaacttaatcgtaaattcacatgtgacataatatataaacaatcataaattgaaa 123  Q
    |||||||| ||||||||||||||| |||| ||||||| ||||||||||||||||||||||||||||||||||||| |||||||| ||||    
T  13819176 tggcggagtcaggaaatttatggagcccgggcaaaaaattaatcgtaaattcacatgtgacataatatataaacagtcataaatcgaaa 13819088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 161 - 279
Target Start/End: Original strand, 31500804 - 31500919
Alignment:
Q  161 ataaaagaggtttatcattttatcaacaaaagtgcaatttaaaatagggttattaattgaaactgaccacgtaatatacgtgaagtctaaaaattgaccc 260  Q
    |||||| |||||||||||||| ||||   |||| |||||||||||||| | ||||||||||  |||||| |||||||||||||||||| ||||||| |||    
T  31500804 ataaaataggtttatcattttgtcaa---aagtacaatttaaaataggataattaattgaagttgaccatgtaatatacgtgaagtctgaaaattggccc 31500900  T
Q  261 tgtaattaaataacatgta 279  Q
    |||||||||||||||||||    
T  31500901 tgtaattaaataacatgta 31500919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 36 - 122
Target Start/End: Complemental strand, 10037111 - 10037025
Alignment:
Q  36 ggcggagccaggaaatttatggaacccgagcaaaaacttaatcgtaaattcacatgtgacataatatataaacaatcataaattgaa 122  Q
    ||||||||||||||||||||||| |||| ||||||| |||||| ||||||||||||||| |||||||||||||| ||||||||||||    
T  10037111 ggcggagccaggaaatttatggagcccgggcaaaaaattaatcataaattcacatgtgatataatatataaacagtcataaattgaa 10037025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 32 - 118
Target Start/End: Original strand, 26282281 - 26282367
Alignment:
Q  32 cagtggcggagccaggaaatttatggaacccgagcaaaaacttaatcgtaaattcacatgtgacataatatataaacaatcataaat 118  Q
    ||||||||||||||||||||||||||| || | || |||| ||||||||||||||||||||||||||||||||||||| ||||||||    
T  26282281 cagtggcggagccaggaaatttatggagcctgggcgaaaaattaatcgtaaattcacatgtgacataatatataaacagtcataaat 26282367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 32 - 118
Target Start/End: Original strand, 36292573 - 36292659
Alignment:
Q  32 cagtggcggagccaggaaatttatggaacccgagcaaaaacttaatcgtaaattcacatgtgacataatatataaacaatcataaat 118  Q
    ||||||||||||||||||||||||||| || | || |||| ||||||||||||||||||||||||||||||||||||| ||||||||    
T  36292573 cagtggcggagccaggaaatttatggagccggggcgaaaaattaatcgtaaattcacatgtgacataatatataaacagtcataaat 36292659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 34 - 118
Target Start/End: Original strand, 16332870 - 16332954
Alignment:
Q  34 gtggcggagccaggaaatttatggaacccgagcaaaaacttaatcgtaaattcacatgtgacataatatataaacaatcataaat 118  Q
    ||||||||||||||||||||||||| |||| ||||||| |||||||||||||||||||| | |||||||||||||| ||||||||    
T  16332870 gtggcggagccaggaaatttatggagcccgggcaaaaaattaatcgtaaattcacatgtaatataatatataaacagtcataaat 16332954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 158 - 248
Target Start/End: Complemental strand, 37255718 - 37255628
Alignment:
Q  158 gaaataaaagaggtttatcattttatcaacaaaagtgcaatttaaaatagggttattaattgaaactgaccacgtaatatacgtgaagtct 248  Q
    |||||||||||||||||||||||| |||| |||| | |||||||||||||| ||||||||| ||| |||||| ||||||||||||||||||    
T  37255718 gaaataaaagaggtttatcattttgtcaataaaaatacaatttaaaataggattattaattaaaattgaccatgtaatatacgtgaagtct 37255628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 32 - 123
Target Start/End: Complemental strand, 16156113 - 16156019
Alignment:
Q  32 cagtggcggagccaggaaatttatggaacccgagc---aaaaacttaatcgtaaattcacatgtgacataatatataaacaatcataaattgaaa 123  Q
    ||||||||||||||||||||||||||| ||||  |   ||||| ||||||||||||||||||||||||||||||||||||||||| |||| ||||    
T  16156113 cagtggcggagccaggaaatttatggagcccggacggtaaaaaattaatcgtaaattcacatgtgacataatatataaacaatcacaaatcgaaa 16156019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 32 - 123
Target Start/End: Complemental strand, 19986660 - 19986569
Alignment:
Q  32 cagtggcggagccaggaaatttatggaacccgagcaaaaacttaatcgtaaattcacatgtgacataatatataaacaatcataaattgaaa 123  Q
    |||||||||||||||||||||||||||  ||| ||||||| |||||| ||||||||||  |||||||||||||||||| |||||||| ||||    
T  19986660 cagtggcggagccaggaaatttatggagtccgggcaaaaaattaatcttaaattcacacttgacataatatataaacagtcataaatcgaaa 19986569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 33 - 123
Target Start/End: Complemental strand, 28802048 - 28801958
Alignment:
Q  33 agtggcggagccaggaaatttatggaacccgagcaaaaacttaatcgtaaattcacatgtgacataatatataaacaatcataaattgaaa 123  Q
    ||||| ||||||| ||||||||||||  ||| ||||||| ||||||| ||||||||||| ||||||||||||||||| |||||||||||||    
T  28802048 agtggtggagccaagaaatttatggagtccgggcaaaaaattaatcgcaaattcacatgcgacataatatataaacagtcataaattgaaa 28801958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 35 - 123
Target Start/End: Original strand, 39656486 - 39656574
Alignment:
Q  35 tggcggagccaggaaatttatggaacccgagcaaaaacttaatcgtaaattcacatgtgacataatatataaacaatcataaattgaaa 123  Q
    |||||||||||| ||||||||||| | || ||||||| |||||| ||||||||||||||| |||||||||||||| |||||||| ||||    
T  39656486 tggcggagccagaaaatttatggagctcgggcaaaaaattaatcttaaattcacatgtgatataatatataaacagtcataaatcgaaa 39656574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 32 - 118
Target Start/End: Original strand, 31500675 - 31500761
Alignment:
Q  32 cagtggcggagccaggaaatttatggaacccgagcaaaaacttaatcgtaaattcacatgtgacataatatataaacaatcataaat 118  Q
    ||||| |||||||||||||||||||||  |||| |||||| || |||| |||||||||||||||||| ||||| |||| ||||||||    
T  31500675 cagtgccggagccaggaaatttatggagtccgaacaaaaaatttatcgcaaattcacatgtgacatagtatatcaacagtcataaat 31500761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 33 - 118
Target Start/End: Complemental strand, 43070063 - 43069980
Alignment:
Q  33 agtggcggagccaggaaatttatggaacccgagcaaaaacttaatcgtaaattcacatgtgacataatatataaacaatcataaat 118  Q
    |||||||||||||||||||||||||| |||| || |||| || |||||||||||||| |||||  |||||||||||| ||||||||    
T  43070063 agtggcggagccaggaaatttatggagcccgggcgaaaaatttatcgtaaattcacacgtgac--aatatataaacagtcataaat 43069980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 213 - 281
Target Start/End: Original strand, 15959080 - 15959149
Alignment:
Q  213 ttaattgaaactgaccacgtaatatacgtgaagtct-aaaaattgaccctgtaattaaataacatgtatt 281  Q
    |||||||||| |||||| |||||||||| ||||||| ||||||| ||||||||||||||||| |||||||    
T  15959080 ttaattgaaattgaccatgtaatatacgcgaagtctgaaaaattaaccctgtaattaaataatatgtatt 15959149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 204 - 275
Target Start/End: Complemental strand, 192835 - 192764
Alignment:
Q  204 atagggttattaattgaaactgaccacgtaatatacgtgaagtctaaaaattgaccctgtaattaaataaca 275  Q
    ||||||||| | ||||||| |||||  ||||||||||| |||||| |||||| |||||||||||||||||||    
T  192835 atagggttacttattgaaattgaccttgtaatatacgtaaagtctgaaaattaaccctgtaattaaataaca 192764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 32 - 106
Target Start/End: Complemental strand, 204168 - 204094
Alignment:
Q  32 cagtggcggagccaggaaatttatggaacccgagcaaaaacttaatcgtaaattcacatgtgacataatatataa 106  Q
    ||||||||||| ||| || ||||| ||||| | || |||| || |||||||||||||||||||||||||||||||    
T  204168 cagtggcggagtcagaaattttatagaacctgggcgaaaaatttatcgtaaattcacatgtgacataatatataa 204094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 67 - 118
Target Start/End: Complemental strand, 192910 - 192859
Alignment:
Q  67 aaaaacttaatcgtaaattcacatgtgacataatatataaacaatcataaat 118  Q
    ||||| || |||| |||||||||||| |||||||||||||||||||||||||    
T  192910 aaaaaatttatcgcaaattcacatgtaacataatatataaacaatcataaat 192859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 32 - 105
Target Start/End: Complemental strand, 2985919 - 2985846
Alignment:
Q  32 cagtggcggagccaggaaatttatggaacccgagcaaaaacttaatcgtaaattcacatgtgacataatatata 105  Q
    |||||||||||||||||| | ||| || || | || |||| || ||||||||||||||||||| ||||||||||    
T  2985919 cagtggcggagccaggaattatatagagcctgggcgaaaaatttatcgtaaattcacatgtgaaataatatata 2985846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 35 - 118
Target Start/End: Complemental strand, 36292574 - 36292493
Alignment:
Q  35 tggcggagccaggaaatttatggaacccgagcaaaaacttaatcgtaaattcacatgtgacataatatataaacaatcataaat 118  Q
    ||||||||||||||||||||||||  ||| || |||| || |||  |||||||||| ||||  |||||||||||| ||||||||    
T  36292574 tggcggagccaggaaatttatggagtccgggcgaaaaatttatcccaaattcacatttgac--aatatataaacagtcataaat 36292493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 33 - 123
Target Start/End: Original strand, 23244429 - 23244520
Alignment:
Q  33 agtggcggagccaggaaattt-atggaacccgagcaaaaacttaatcgtaaattcacatgtgacataatatataaacaatcataaattgaaa 123  Q
    |||||| |||||||||||||| || || |  ||| ||||| ||||||| ||||| ||||| ||||||||||||||| |  ||||||||||||    
T  23244429 agtggcagagccaggaaattttatagagcatgagaaaaaatttaatcgcaaatttacatgcgacataatatataaatagccataaattgaaa 23244520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 81 - 123
Target Start/End: Complemental strand, 1280848 - 1280806
Alignment:
Q  81 aaattcacatgtgacataatatataaacaatcataaattgaaa 123  Q
    ||||||||||||||||||||||||||| | |||||||| ||||    
T  1280848 aaattcacatgtgacataatatataaatagtcataaatcgaaa 1280806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 32 - 105
Target Start/End: Original strand, 4306673 - 4306746
Alignment:
Q  32 cagtggcggagccaggaaatttatggaacccgagcaaaaacttaatcgtaaattcacatgtgacataatatata 105  Q
    |||||||||||||||||| |  || || || | || |||| || |||| |||||||||||||||||||||||||    
T  4306673 cagtggcggagccaggaattacatagagcctgggcgaaaaatttatcgcaaattcacatgtgacataatatata 4306746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 32 - 105
Target Start/End: Original strand, 15497447 - 15497520
Alignment:
Q  32 cagtggcggagccaggaaatttatggaacccgagcaaaaacttaatcgtaaattcacatgtgacataatatata 105  Q
    |||||||||||||||||| |  || || || | || |||| || |||| |||||||||||||||||||||||||    
T  15497447 cagtggcggagccaggaattacatagagcctgggcgaaaaatttatcgcaaattcacatgtgacataatatata 15497520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 73 - 105
Target Start/End: Original strand, 12098059 - 12098091
Alignment:
Q  73 ttaatcgtaaattcacatgtgacataatatata 105  Q
    |||| ||||||||||||||||||||||||||||    
T  12098059 ttaaccgtaaattcacatgtgacataatatata 12098091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 104; Significance: 7e-52; HSPs: 30)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 104; E-Value: 7e-52
Query Start/End: Original strand, 158 - 281
Target Start/End: Complemental strand, 23314080 - 23313957
Alignment:
Q  158 gaaataaaagaggtttatcattttatcaacaaaagtgcaatttaaaatagggttattaattgaaactgaccacgtaatatacgtgaagtctaaaaattga 257  Q
    |||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||    
T  23314080 gaaataaaagaggtttatcattttgtcaacaaaagtacaatttaaaatagggttattaattgaaattgaccacgtaatatacgtgaagtctgaaaattga 23313981  T
Q  258 ccctgtaattaaataacatgtatt 281  Q
    || |||||||||||||||||||||    
T  23313980 ccatgtaattaaataacatgtatt 23313957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 158 - 276
Target Start/End: Complemental strand, 7434508 - 7434390
Alignment:
Q  158 gaaataaaagaggtttatcattttatcaacaaaagtgcaatttaaaatagggttattaattgaaactgaccacgtaatatacgtgaagtctaaaaattga 257  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||| ||||||||    
T  7434508 gaaataaaagaggtttatcattttgtcaacaaaagtgcaatttaaaatagggttattaattgaaattgacaacgtaatatacgtgaagtctgaaaattga 7434409  T
Q  258 ccctgtaattaaataacat 276  Q
    || ||||||||||||||||    
T  7434408 ccatgtaattaaataacat 7434390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 158 - 281
Target Start/End: Original strand, 15209369 - 15209493
Alignment:
Q  158 gaaataaaagaggtttatcattttatcaacaaaagtgcaatttaaaatagggttattaattgaaactgaccacgtaatatacgtgaagtct-aaaaattg 256  Q
    ||||||||||||||| |||||||| ||||||||||| |||||||||||||||||||||||||||| |||||| |||||||||||||||||| ||||||||    
T  15209369 gaaataaaagaggttcatcattttgtcaacaaaagtacaatttaaaatagggttattaattgaaattgaccatgtaatatacgtgaagtctgaaaaattg 15209468  T
Q  257 accctgtaattaaataacatgtatt 281  Q
    |||||||||||||||||||||||||    
T  15209469 accctgtaattaaataacatgtatt 15209493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 159 - 281
Target Start/End: Complemental strand, 17446378 - 17446256
Alignment:
Q  159 aaataaaagaggtttatcattttatcaacaaaagtgcaatttaaaatagggttattaattgaaactgaccacgtaatatacgtgaagtctaaaaattgac 258  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||| |||||| |||||||||||||||||| ||||||| |    
T  17446378 aaataaaagaggtttatcattttgtcaacaaaagtgcaatttaaaataggattattaattgaaattgaccatgtaatatacgtgaagtctgaaaattggc 17446279  T
Q  259 cctgtaattaaataacatgtatt 281  Q
    | |||||||||||||||||||||    
T  17446278 catgtaattaaataacatgtatt 17446256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 156 - 281
Target Start/End: Original strand, 32981137 - 32981262
Alignment:
Q  156 ttgaaataaaagaggtttatcattttatcaacaaaagtgcaatttaaaatagggttattaattgaaactgaccacgtaatatacgtgaagtctaaaaatt 255  Q
    |||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||| ||||| | |||||||||||| |||| ||||||    
T  32981137 ttgaaataaaagaggtttatcattttgtcaacaaaagtacaatttaaaatagggttattaattgaaattgaccgcctaatatacgtgatgtctgaaaatt 32981236  T
Q  256 gaccctgtaattaaataacatgtatt 281  Q
    |||| |||||||||||||||||||||    
T  32981237 gaccatgtaattaaataacatgtatt 32981262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 158 - 281
Target Start/End: Original strand, 11957439 - 11957562
Alignment:
Q  158 gaaataaaagaggtttatcattttatcaacaaaagtgcaatttaaaatagggttattaattgaaactgaccacgtaatatacgtgaagtctaaaaattga 257  Q
    |||||||||||||||||||||||| ||||||||||| |||||||||||||| ||||||||||||| |||||| |||||||| ||||||||| |||||| |    
T  11957439 gaaataaaagaggtttatcattttgtcaacaaaagtacaatttaaaataggattattaattgaaattgaccatgtaatatatgtgaagtctgaaaattaa 11957538  T
Q  258 ccctgtaattaaataacatgtatt 281  Q
    ||||| ||||||||||||||||||    
T  11957539 ccctgcaattaaataacatgtatt 11957562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 156 - 281
Target Start/End: Original strand, 42310017 - 42310145
Alignment:
Q  156 ttgaaataaaagaggtttatcattttatcaacaaaagtgcaatttaaaatagggttattaattgaaactgaccacgtaatatacgtgaagtctaaaaatt 255  Q
    ||||||||||||| |||||||||||| | ||||||||| |||||||||||| | ||||||||||||| |||||||||||||||| |||||||| ||||||    
T  42310017 ttgaaataaaagatgtttatcattttgtaaacaaaagtacaatttaaaatatgattattaattgaaattgaccacgtaatatacatgaagtctgaaaatt 42310116  T
Q  256 gacc---ctgtaattaaataacatgtatt 281  Q
    ||||   ||||||||||||||||||||||    
T  42310117 gaccctgctgtaattaaataacatgtatt 42310145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 159 - 281
Target Start/End: Original strand, 41971337 - 41971460
Alignment:
Q  159 aaataaaagaggtttatcattttatcaacaaaagtgcaatttaaaatagggttattaattgaaactgaccacgtaatatacgtgaagtct-aaaaattga 257  Q
    ||||||||||||||  || ||||  |||||||||| ||||||||||||||||| |||||||||| ||||||  |||||||||||||| || |||||||||    
T  41971337 aaataaaagaggttcctcgttttgacaacaaaagtacaatttaaaatagggttgttaattgaaattgaccatataatatacgtgaagcctgaaaaattga 41971436  T
Q  258 ccctgtaattaaataacatgtatt 281  Q
    ||||||||||||||||||||||||    
T  41971437 ccctgtaattaaataacatgtatt 41971460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 183 - 281
Target Start/End: Complemental strand, 33490441 - 33490342
Alignment:
Q  183 tcaacaaaagtgcaatttaaaatagggttattaattgaaactgaccacgtaatatacgtgaagtct-aaaaattgaccctgtaattaaataacatgtatt 281  Q
    ||||||||||| |||||||||||||||||||||||||||| |||||| |||||||||||||||| | |||||||| || |||||||||||||||||||||    
T  33490441 tcaacaaaagtacaatttaaaatagggttattaattgaaattgaccatgtaatatacgtgaagtatgaaaaattgcccatgtaattaaataacatgtatt 33490342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 32 - 118
Target Start/End: Complemental strand, 7434621 - 7434535
Alignment:
Q  32 cagtggcggagccaggaaatttatggaacccgagcaaaaacttaatcgtaaattcacatgtgacataatatataaacaatcataaat 118  Q
    ||||||||||||||||||||||||||| |||| || |||| |||||||||||||||||||||| |||||||||||||||||||||||    
T  7434621 cagtggcggagccaggaaatttatggagcccgggcgaaaaattaatcgtaaattcacatgtgatataatatataaacaatcataaat 7434535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 33 - 123
Target Start/End: Original strand, 42309899 - 42309989
Alignment:
Q  33 agtggcggagccaggaaatttatggaacccgagcaaaaacttaatcgtaaattcacatgtgacataatatataaacaatcataaattgaaa 123  Q
    |||||||||||||||||||||||||| |  | ||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  42309899 agtggcggagccaggaaatttatggagcttgggcaaaaaattaatcgtaaattcacatgtgacataatatataaacagtcataaattgaaa 42309989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 36 - 123
Target Start/End: Original strand, 32981008 - 32981095
Alignment:
Q  36 ggcggagccaggaaatttatggaacccgagcaaaaacttaatcgtaaattcacatgtgacataatatataaacaatcataaattgaaa 123  Q
    |||||| ||||||||||||||||  ||||||||||| ||||||||||||||||||||||||||||||||||| | |||||||| ||||    
T  32981008 ggcggaaccaggaaatttatggagtccgagcaaaaaattaatcgtaaattcacatgtgacataatatataaatagtcataaatcgaaa 32981095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 32 - 123
Target Start/End: Original strand, 320668 - 320759
Alignment:
Q  32 cagtggcggagccaggaaatttatggaacccgagcaaaaacttaatcgtaaattcacatgtgacataatatataaacaatcataaattgaaa 123  Q
    ||||||||||||||||||||||||||| |||| ||||||| |  |||| |||||||||||||||||||||||||| || |||||||| ||||    
T  320668 cagtggcggagccaggaaatttatggagcccgggcaaaaattgtatcgcaaattcacatgtgacataatatataatcagtcataaatcgaaa 320759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 32 - 118
Target Start/End: Complemental strand, 17446505 - 17446419
Alignment:
Q  32 cagtggcggagccaggaaatttatggaacccgagcaaaaacttaatcgtaaattcacatgtgacataatatataaacaatcataaat 118  Q
    ||||||||||| ||||||||||||||| |||||||||| | || |||| |||||||||||||||||||||||| |||| ||||||||    
T  17446505 cagtggcggagtcaggaaatttatggagcccgagcaaataatttatcgcaaattcacatgtgacataatatatcaacagtcataaat 17446419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 32 - 107
Target Start/End: Original strand, 15209283 - 15209358
Alignment:
Q  32 cagtggcggagccaggaaatttatggaacccgagcaaaaacttaatcgtaaattcacatgtgacataatatataaa 107  Q
    |||||||||||||| |||||||||||| |||||||||||| || | || |||||||||||||||||||||||||||    
T  15209283 cagtggcggagccaagaaatttatggagcccgagcaaaaattttaacgcaaattcacatgtgacataatatataaa 15209358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 158 - 228
Target Start/End: Complemental strand, 3830038 - 3829968
Alignment:
Q  158 gaaataaaagaggtttatcattttatcaacaaaagtgcaatttaaaatagggttattaattgaaactgacc 228  Q
    ||||||||| |||||||| ||||| ||||||||||| |||||||||||||||||||||||||||| |||||    
T  3830038 gaaataaaataggtttataattttgtcaacaaaagtacaatttaaaatagggttattaattgaaattgacc 3829968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 158 - 248
Target Start/End: Complemental strand, 35908642 - 35908552
Alignment:
Q  158 gaaataaaagaggtttatcattttatcaacaaaagtgcaatttaaaatagggttattaattgaaactgaccacgtaatatacgtgaagtct 248  Q
    |||||||||||||||||||||||| |||| |||| | |||||||||||||| ||||||||| ||| |||| | |||||||| |||||||||    
T  35908642 gaaataaaagaggtttatcattttgtcaataaaaatacaatttaaaataggattattaattaaaattgacaatgtaatatatgtgaagtct 35908552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 34 - 116
Target Start/End: Original strand, 41971250 - 41971332
Alignment:
Q  34 gtggcggagccaggaaatttatggaacccgagcaaaaacttaatcgtaaattcacatgtgacataatatataaacaatcataa 116  Q
    |||||||||||||||||||||||||  ||   |||||| || |||| ||||||||||||||||||||||||||||| ||||||    
T  41971250 gtggcggagccaggaaatttatggagtccagacaaaaaatttatcgcaaattcacatgtgacataatatataaacagtcataa 41971332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 32 - 94
Target Start/End: Complemental strand, 26159423 - 26159361
Alignment:
Q  32 cagtggcggagccaggaaatttatggaacccgagcaaaaacttaatcgtaaattcacatgtga 94  Q
    ||||||||||||||||||||||||||| || | || |||| ||||||||||||||||||||||    
T  26159423 cagtggcggagccaggaaatttatggagcctgggcgaaaaattaatcgtaaattcacatgtga 26159361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 34 - 118
Target Start/End: Complemental strand, 3830151 - 3830069
Alignment:
Q  34 gtggcggagccaggaaatttatggaacccgagcaaaaacttaatcgtaaattcacatgtgacataatatataaacaatcataaat 118  Q
    ||||||||||||||||||||||||| | || ||||||| || |||| |||||||||  | | ||||||||||||| |||||||||    
T  3830151 gtggcggagccaggaaatttatggagctcgggcaaaaaatttatcgcaaattcaca--tcagataatatataaacgatcataaat 3830069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 34 - 123
Target Start/End: Complemental strand, 23314206 - 23314119
Alignment:
Q  34 gtggcggagccaggaaatttatggaacccgagcaaaaacttaatcgtaaattcacatgtgacataatatataaacaatcataaattgaaa 123  Q
    |||||||||| |||||||||||||| || || |||| | |||||||||||||||||||| | || ||||||||||| |||||||| ||||    
T  23314206 gtggcggagc-aggaaatttatggagccgga-caaataattaatcgtaaattcacatgtaatattatatataaacagtcataaatcgaaa 23314119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 32 - 121
Target Start/End: Original strand, 11957304 - 11957393
Alignment:
Q  32 cagtggcggagccaggaaatttatggaacccgagcaaaaacttaatcgtaaattcacatgtgacataatatataaacaatcataaattga 121  Q
    ||||||||||||||| ||||||||| |    | ||||||| || |||| ||||| ||| |||||||||||||| |||| |||||||||||    
T  11957304 cagtggcggagccagaaaatttatgaagtttgggcaaaaaatttatcgcaaattaacacgtgacataatatatcaacagtcataaattga 11957393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 79 - 118
Target Start/End: Original strand, 30558911 - 30558950
Alignment:
Q  79 gtaaattcacatgtgacataatatataaacaatcataaat 118  Q
    ||||||||||||||||||||||||||||| | ||||||||    
T  30558911 gtaaattcacatgtgacataatatataaatagtcataaat 30558950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 31 - 98
Target Start/End: Original strand, 48900638 - 48900705
Alignment:
Q  31 acagtggcggagccaggaaatttatggaacccgagcaaaaacttaatcgtaaattcacatgtgacata 98  Q
    ||||||||||||||||||| ||  | || |||| ||||||| ||||||| ||||||| ||||||||||    
T  48900638 acagtggcggagccaggaatttcttagagcccgggcaaaaatttaatcgcaaattcaaatgtgacata 48900705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 76 - 123
Target Start/End: Original strand, 52753718 - 52753765
Alignment:
Q  76 atcgtaaattcacatgtgacataatatataaacaatcataaattgaaa 123  Q
    |||||||||||||||| ||||||||||||||| | |||||||| ||||    
T  52753718 atcgtaaattcacatgcgacataatatataaatagtcataaatcgaaa 52753765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 251 - 281
Target Start/End: Complemental strand, 3829976 - 3829946
Alignment:
Q  251 aaattgaccctgtaattaaataacatgtatt 281  Q
    |||||||||||||||||||||||||||||||    
T  3829976 aaattgaccctgtaattaaataacatgtatt 3829946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 76 - 106
Target Start/End: Original strand, 35948880 - 35948910
Alignment:
Q  76 atcgtaaattcacatgtgacataatatataa 106  Q
    |||||||||||||||||||||||||||||||    
T  35948880 atcgtaaattcacatgtgacataatatataa 35948910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 81 - 123
Target Start/End: Original strand, 48606520 - 48606562
Alignment:
Q  81 aaattcacatgtgacataatatataaacaatcataaattgaaa 123  Q
    |||||||||||| |||||||||||||| | |||||||||||||    
T  48606520 aaattcacatgtaacataatatataaatagtcataaattgaaa 48606562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 158 - 206
Target Start/End: Complemental strand, 17875006 - 17874958
Alignment:
Q  158 gaaataaaagaggtttatcattttatcaacaaaagtgcaatttaaaata 206  Q
    |||||| |||| |||  ||||||||||||||||||| ||||||||||||    
T  17875006 gaaatagaagaagttcgtcattttatcaacaaaagtacaatttaaaata 17874958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 65 - 105
Target Start/End: Complemental strand, 17875597 - 17875557
Alignment:
Q  65 gcaaaaacttaatcgtaaattcacatgtgacataatatata 105  Q
    ||||||| || |||| |||||||||||||||||||||||||    
T  17875597 gcaaaaaatttatcgcaaattcacatgtgacataatatata 17875557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0069 (Bit Score: 99; Significance: 7e-49; HSPs: 2)
Name: scaffold0069
Description:

Target: scaffold0069; HSP #1
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 159 - 281
Target Start/End: Complemental strand, 18644 - 18523
Alignment:
Q  159 aaataaaagaggtttatcattttatcaacaaaagtgcaatttaaaatagggttattaattgaaactgaccacgtaatatacgtgaagtctaaaaattgac 258  Q
    ||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||| ||||||||||||||||||||||||| ||||||||     
T  18644 aaataaaagaggtttatcattttatcaacaaaagtacaatttaatatagggttattaattgaaattgaccacgtaatatacgtgaagtctgaaaattga- 18546  T
Q  259 cctgtaattaaataacatgtatt 281  Q
    |||||||||||||||||||||||    
T  18545 cctgtaattaaataacatgtatt 18523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0069; HSP #2
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 32 - 118
Target Start/End: Complemental strand, 18773 - 18687
Alignment:
Q  32 cagtggcggagccaggaaatttatggaacccgagcaaaaacttaatcgtaaattcacatgtgacataatatataaacaatcataaat 118  Q
    |||||||||||||| |||||||||||| |||| ||||||| ||||||||||||||||||||||||||||||||||||| ||||||||    
T  18773 cagtggcggagccatgaaatttatggagcccgggcaaaaaattaatcgtaaattcacatgtgacataatatataaacagtcataaat 18687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 99; Significance: 7e-49; HSPs: 36)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 159 - 281
Target Start/End: Complemental strand, 19391231 - 19391110
Alignment:
Q  159 aaataaaagaggtttatcattttatcaacaaaagtgcaatttaaaatagggttattaattgaaactgaccacgtaatatacgtgaagtctaaaaattgac 258  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||| ||||| ||||||||||||||||||||||||| |||||||||    
T  19391231 aaataaaagaggtttatcattttatcaacaaaagtacaatttaaaatagg-ttattaactgaaattgaccacgtaatatacgtgaagtctgaaaattgac 19391133  T
Q  259 cctgtaattaaataacatgtatt 281  Q
    |||||||||||||||||||||||    
T  19391132 cctgtaattaaataacatgtatt 19391110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 163 - 281
Target Start/End: Original strand, 34083207 - 34083325
Alignment:
Q  163 aaaagaggtttatcattttatcaacaaaagtgcaatttaaaatagggttattaattgaaactgaccacgtaatatacgtgaagtctaaaaattgaccctg 262  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||| ||| |||||||||||||    
T  34083207 aaaagaggtttatcattttgtcaacaaaagtgcaatttaaaatagggttattaattgaaattgaccacgtaatatacttgaactctgaaaattgaccctg 34083306  T
Q  263 taattaaataacatgtatt 281  Q
    |||||||||||||||||||    
T  34083307 taattaaataacatgtatt 34083325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 156 - 281
Target Start/End: Complemental strand, 35515084 - 35514959
Alignment:
Q  156 ttgaaataaaagaggtttatcattttatcaacaaaagtgcaatttaaaatagggttattaattgaaactgaccacgtaatatacgtgaagtctaaaaatt 255  Q
    ||||||||||| |||||||||||||||||||||||| | |||||||||||||||||||||||||||| |||||| |||||||||||||||||| ||||||    
T  35515084 ttgaaataaaaaaggtttatcattttatcaacaaaaatacaatttaaaatagggttattaattgaaattgaccatgtaatatacgtgaagtctgaaaatt 35514985  T
Q  256 gaccctgtaattaaataacatgtatt 281  Q
     |||||||||||||||||||||||||    
T  35514984 taccctgtaattaaataacatgtatt 35514959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 159 - 281
Target Start/End: Original strand, 6268503 - 6268625
Alignment:
Q  159 aaataaaagaggtttatcattttatcaacaaaagtgcaatttaaaatagggttattaattgaaactgaccacgtaatatacgtgaagtctaaaaattgac 258  Q
    ||||||| || |||||||||||||||||||||||| |||||||||||||||||||||||||||| | ||||||||||||||||||||||| |||||||||    
T  6268503 aaataaatgaagtttatcattttatcaacaaaagtacaatttaaaatagggttattaattgaaattaaccacgtaatatacgtgaagtctgaaaattgac 6268602  T
Q  259 cctgtaattaaataacatgtatt 281  Q
    | |||||||||||||||||||||    
T  6268603 cttgtaattaaataacatgtatt 6268625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 161 - 281
Target Start/End: Original strand, 22967527 - 22967647
Alignment:
Q  161 ataaaagaggtttatcattttatcaacaaaagtgcaatttaaaatagggttattaattgaaactgaccacgtaatatacgtgaagtctaaaaattgaccc 260  Q
    ||||| || |||||||||||||||||||||||| |||||||||||||||||||||||||||| | ||||||||||||||||||||| | |||||||||||    
T  22967527 ataaatgaagtttatcattttatcaacaaaagtacaatttaaaatagggttattaattgaaattaaccacgtaatatacgtgaagtttgaaaattgaccc 22967626  T
Q  261 tgtaattaaataacatgtatt 281  Q
    |||||||||||||||||||||    
T  22967627 tgtaattaaataacatgtatt 22967647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 159 - 281
Target Start/End: Complemental strand, 39772876 - 39772754
Alignment:
Q  159 aaataaaagaggtttatcattttatcaacaaaagtgcaatttaaaatagggttattaattgaaactgaccacgtaatatacgtgaagtctaaaaattgac 258  Q
    ||||||| || |||||||||||||||||||||||  |||||||||||||||||||||||| ||| | ||||||||||||||||||||||| |||||||||    
T  39772876 aaataaatgaagtttatcattttatcaacaaaaggacaatttaaaatagggttattaatttaaattaaccacgtaatatacgtgaagtctgaaaattgac 39772777  T
Q  259 cctgtaattaaataacatgtatt 281  Q
    |||||||||||||||||||||||    
T  39772776 cctgtaattaaataacatgtatt 39772754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 158 - 281
Target Start/End: Original strand, 40080822 - 40080945
Alignment:
Q  158 gaaataaaagaggtttatcattttatcaacaaaagtgcaatttaaaatagggttattaattgaaactgaccacgtaatatacgtgaagtctaaaaattga 257  Q
    ||||||||| |||||||||||||| ||||||||||| |||||||||||| ||||||||||||||| ||||||||||||||||||||||||| ||||||||    
T  40080822 gaaataaaaaaggtttatcattttgtcaacaaaagtacaatttaaaataaggttattaattgaaattgaccacgtaatatacgtgaagtctgaaaattga 40080921  T
Q  258 ccctgtaattaaataacatgtatt 281  Q
    || | |||||||||||||| ||||    
T  40080922 ccatataattaaataacatatatt 40080945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 156 - 282
Target Start/End: Complemental strand, 45184068 - 45183942
Alignment:
Q  156 ttgaaataaaagaggtttatcattttatcaacaaaagtgcaatttaaaatagggttattaattgaaactgaccacgtaatatacgtgaagtctaaaaatt 255  Q
    |||||||||||||||||||||||||| |||| |||| | |||||||||||||| ||||||||| ||| |||||| |||||||| ||||||||| ||||||    
T  45184068 ttgaaataaaagaggtttatcattttgtcaataaaactacaatttaaaataggattattaattaaaattgaccatgtaatatatgtgaagtctgaaaatt 45183969  T
Q  256 gaccctgtaattaaataacatgtattt 282  Q
    | |||||||||||||||||||||||||    
T  45183968 ggccctgtaattaaataacatgtattt 45183942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 156 - 282
Target Start/End: Original strand, 6929973 - 6930099
Alignment:
Q  156 ttgaaataaaagaggtttatcattttatcaacaaaagtgcaatttaaaatagggttattaattgaaactgaccacgtaatatacgtgaagtctaaaaatt 255  Q
    |||||||||||||||||||||||||| |||| |||| | |||||||||||||| ||||||||| ||| | |||| |||||||  ||||||||| ||||||    
T  6929973 ttgaaataaaagaggtttatcattttgtcaataaaactacaatttaaaataggattattaattaaaatttaccatgtaatatgtgtgaagtctgaaaatt 6930072  T
Q  256 gaccctgtaattaaataacatgtattt 282  Q
    |||||||||||||||||||||||||||    
T  6930073 gaccctgtaattaaataacatgtattt 6930099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 158 - 282
Target Start/End: Original strand, 11017351 - 11017475
Alignment:
Q  158 gaaataaaagaggtttatcattttatcaacaaaagtgcaatttaaaatagggttattaattgaaactgaccacgtaatatacgtgaagtctaaaaattga 257  Q
    |||||||||||||||||||| ||| |||| |||||| |||||||||||||| ||||||||| |||  ||||| |||||||| ||||||||| |||||||     
T  11017351 gaaataaaagaggtttatcaatttgtcaataaaagtacaatttaaaataggattattaattaaaatcgaccatgtaatatatgtgaagtctgaaaattgg 11017450  T
Q  258 ccctgtaattaaataacatgtattt 282  Q
    |||||||||||||||||||||||||    
T  11017451 ccctgtaattaaataacatgtattt 11017475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 159 - 265
Target Start/End: Original strand, 1185591 - 1185698
Alignment:
Q  159 aaataaaagaggtttatcattttatcaacaaaagtgcaatttaaaatagggttattaattgaaactgaccacgtaatatacgtgaagtct-aaaaattga 257  Q
    ||||||||||||||  | ||||| |||||||||||| ||||||||||||||||||||||||||| |||||| |||||||||||||||||| |||||||||    
T  1185591 aaataaaagaggttccttattttgtcaacaaaagtgaaatttaaaatagggttattaattgaaattgaccatgtaatatacgtgaagtctgaaaaattga 1185690  T
Q  258 ccctgtaa 265  Q
    ||||||||    
T  1185691 ccctgtaa 1185698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 158 - 282
Target Start/End: Original strand, 19564597 - 19564722
Alignment:
Q  158 gaaataaaagaggtttatcattttatcaacaaaagtgcaatttaaaatagggttattaattgaaactgaccacgtaatatacgtgaagtctaaaaattga 257  Q
    ||||||||| || ||||||||||| ||| ||||||| |||| ||||||| ||||||||||||||| |||||| |||||||||||||||||| ||||||||    
T  19564597 gaaataaaaaagatttatcattttgtcatcaaaagtacaatgtaaaatatggttattaattgaaattgaccatgtaatatacgtgaagtctgaaaattga 19564696  T
Q  258 ccctgt-aattaaataacatgtattt 282  Q
    || ||| |||||||| ||||||||||    
T  19564697 ccttgtgaattaaatcacatgtattt 19564722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 31 - 118
Target Start/End: Complemental strand, 39772996 - 39772909
Alignment:
Q  31 acagtggcggagccaggaaatttatggaacccgagcaaaaacttaatcgtaaattcacatgtgacataatatataaacaatcataaat 118  Q
    ||||||||||||| |||||||||||||| || | || |||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  39772996 acagtggcggagctaggaaatttatggagcctgggcgaaaaattaatcgtaaattcacatgtgacataatatataaacaatcataaat 39772909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 178 - 281
Target Start/End: Complemental strand, 45336924 - 45336820
Alignment:
Q  178 ttttatcaacaaaagtgcaatttaaaatagggttattaattgaaactgaccacgtaatatacgtgaagtctaaaaattgaccctgt-aattaaataacat 276  Q
    |||| ||||||||||| |||||||||||||||||||||||||||| |||||| |||||||||||||||||| |||| | ||| ||| |||||||| ||||    
T  45336924 ttttgtcaacaaaagtacaatttaaaatagggttattaattgaaattgaccatgtaatatacgtgaagtctgaaaagtaaccttgtaaattaaatcacat 45336825  T
Q  277 gtatt 281  Q
    |||||    
T  45336824 gtatt 45336820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 32 - 118
Target Start/End: Original strand, 34083075 - 34083161
Alignment:
Q  32 cagtggcggagccaggaaatttatggaacccgagcaaaaacttaatcgtaaattcacatgtgacataatatataaacaatcataaat 118  Q
    |||||||||||| ||||||||||||||  ||| | ||||| ||||||||||||||||||||||||||||||||||||| ||||||||    
T  34083075 cagtggcggagctaggaaatttatggagtccgggaaaaaaattaatcgtaaattcacatgtgacataatatataaacagtcataaat 34083161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 32 - 118
Target Start/End: Original strand, 40080710 - 40080795
Alignment:
Q  32 cagtggcggagccaggaaatttatggaacccgagcaaaaacttaatcgtaaattcacatgtgacataatatataaacaatcataaat 118  Q
    ||||||||||||||||||||||||||| || | ||||||| |||| |||||||||||||||||||||||||||||| ||||||||||    
T  40080710 cagtggcggagccaggaaatttatggagccgg-gcaaaaaattaaacgtaaattcacatgtgacataatatataaataatcataaat 40080795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 32 - 121
Target Start/End: Original strand, 22967395 - 22967484
Alignment:
Q  32 cagtggcggagccaggaaatttatggaacccgagcaaaaacttaatcgtaaattcacatgtgacataatatataaacaatcataaattga 121  Q
    ||||||||||||||||||||||||||| || | || |||| ||||||||||| ||||||||||||||||||||||||| || ||||||||    
T  22967395 cagtggcggagccaggaaatttatggagcctgggcgaaaaattaatcgtaaactcacatgtgacataatatataaacagtcgtaaattga 22967484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 159 - 274
Target Start/End: Complemental strand, 5136377 - 5136263
Alignment:
Q  159 aaataaaagaggtttatcattttatcaacaaaagtgcaatttaaaatagggttattaattgaaactgaccacgtaatatacgtgaagtct-aaaaattga 257  Q
    ||||||||||||||  ||| ||| ||||||||| | |||||||||||||| ||||||||||||| |||  | |||||||||||||| ||| |||||||||    
T  5136377 aaataaaagaggttc-tcagtttgtcaacaaaaatacaatttaaaataggattattaattgaaattga-tatgtaatatacgtgaaatctgaaaaattga 5136280  T
Q  258 ccctgtaattaaataac 274  Q
    |||||||||||||||||    
T  5136279 ccctgtaattaaataac 5136263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 196 - 282
Target Start/End: Complemental strand, 33041998 - 33041912
Alignment:
Q  196 aatttaaaatagggttattaattgaaactgaccacgtaatatacgtgaagtctaaaaattgaccctgtaattaaataacatgtattt 282  Q
    ||||| ||||||| ||||||||| ||| |||| | |||||||| ||||||||| ||||||| |||||||||||||||||||||||||    
T  33041998 aattttaaataggattattaattaaaattgactatgtaatatatgtgaagtctgaaaattggccctgtaattaaataacatgtattt 33041912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 32 - 118
Target Start/End: Original strand, 1185501 - 1185588
Alignment:
Q  32 cagtggcggagccaggaaatttatggaacccgagcaaaaacttaatcgtaaatt-cacatgtgacataatatataaacaatcataaat 118  Q
    ||||||||||||||| ||||||||| |  ||| ||||||| || |||||||||| |||||||||||||||||||||||| ||||||||    
T  1185501 cagtggcggagccagaaaatttatgaagtccgggcaaaaaatttatcgtaaatttcacatgtgacataatatataaacagtcataaat 1185588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 158 - 218
Target Start/End: Complemental strand, 27936237 - 27936177
Alignment:
Q  158 gaaataaaagaggtttatcattttatcaacaaaagtgcaatttaaaatagggttattaatt 218  Q
    ||||||||| |||||||||||||| |||||||||||  |||||||||||||||||||||||    
T  27936237 gaaataaaataggtttatcattttgtcaacaaaagtaaaatttaaaatagggttattaatt 27936177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 39 - 118
Target Start/End: Complemental strand, 27936346 - 27936267
Alignment:
Q  39 ggagccaggaaatttatggaacccgagcaaaaacttaatcgtaaattcacatgtgacataatatataaacaatcataaat 118  Q
    ||||| ||||||||||||||   || ||||||| || |||| |||||||||||||| |||||||||||||||||||||||    
T  27936346 ggagcaaggaaatttatggagttcgggcaaaaaatttatcgcaaattcacatgtgagataatatataaacaatcataaat 27936267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 232 - 282
Target Start/End: Original strand, 6502723 - 6502773
Alignment:
Q  232 taatatacgtgaagtctaaaaattgaccctgtaattaaataacatgtattt 282  Q
    ||||||||||||||||| ||||||| |||||||||||||| ||||||||||    
T  6502723 taatatacgtgaagtctgaaaattggccctgtaattaaattacatgtattt 6502773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 29 - 123
Target Start/End: Complemental strand, 35515172 - 35515079
Alignment:
Q  29 acacagtggcggagccaggaaatttatggaacccgagcaaaaacttaatcgtaaattcacatgtgacataatatataaacaatcataaattgaaa 123  Q
    |||||||| || |||| | |||||||||||  |||| |||||| ||| ||  |||||||| | ||||||||||||||||||||||||| ||||||    
T  35515172 acacagtgccgaagccggaaaatttatggagtccgaacaaaaattta-tcacaaattcacttatgacataatatataaacaatcataagttgaaa 35515079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 158 - 206
Target Start/End: Complemental strand, 43137354 - 43137306
Alignment:
Q  158 gaaataaaagaggtttatcattttatcaacaaaagtgcaatttaaaata 206  Q
    |||||||||||||||| ||||||| ||||||||| | ||||||||||||    
T  43137354 gaaataaaagaggtttgtcattttttcaacaaaaatacaatttaaaata 43137306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 81 - 119
Target Start/End: Complemental strand, 5136417 - 5136379
Alignment:
Q  81 aaattcacatgtgacataatatataaacaatcataaatt 119  Q
    ||||||||||||||| ||||||||||||| |||||||||    
T  5136417 aaattcacatgtgacgtaatatataaacagtcataaatt 5136379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 31 - 105
Target Start/End: Complemental strand, 6891563 - 6891489
Alignment:
Q  31 acagtggcggagccaggaaatttatggaacccgagcaaaaacttaatcgtaaattcacatgtgacataatatata 105  Q
    ||||||||||||||||||| |  || || || | || |||| || |||| |||||||||||||||||||||||||    
T  6891563 acagtggcggagccaggaattacatagagcctgggcgaaaaatttatcgcaaattcacatgtgacataatatata 6891489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 73 - 123
Target Start/End: Original strand, 42269138 - 42269188
Alignment:
Q  73 ttaatcgtaaattcacatgtgacataatatataaacaatcataaattgaaa 123  Q
    |||| |||||||| | ||||||||||||||||||| ||| |||||||||||    
T  42269138 ttaaccgtaaatttatatgtgacataatatataaataattataaattgaaa 42269188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 73 - 107
Target Start/End: Original strand, 42964798 - 42964832
Alignment:
Q  73 ttaatcgtaaattcacatgtgacataatatataaa 107  Q
    |||| ||||||||||||||||||||||||||||||    
T  42964798 ttaaccgtaaattcacatgtgacataatatataaa 42964832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 78 - 107
Target Start/End: Complemental strand, 15668215 - 15668186
Alignment:
Q  78 cgtaaattcacatgtgacataatatataaa 107  Q
    ||||||||||||||||||||||||||||||    
T  15668215 cgtaaattcacatgtgacataatatataaa 15668186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 32 - 105
Target Start/End: Original strand, 19269162 - 19269235
Alignment:
Q  32 cagtggcggagccaggaaatttatggaacccgagcaaaaacttaatcgtaaattcacatgtgacataatatata 105  Q
    |||||||||||||||||| |  || || || | || |||| || |||| |||||||||||||||||||||||||    
T  19269162 cagtggcggagccaggaattacatagagcctgggcgaaaaatttatcgcaaattcacatgtgacataatatata 19269235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 81 - 118
Target Start/End: Original strand, 24988721 - 24988758
Alignment:
Q  81 aaattcacatgtgacataatatataaacaatcataaat 118  Q
    |||||||||||||||||||| |||||| ||||||||||    
T  24988721 aaattcacatgtgacataatttataaataatcataaat 24988758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 32 - 105
Target Start/End: Original strand, 48757334 - 48757407
Alignment:
Q  32 cagtggcggagccaggaaatttatggaacccgagcaaaaacttaatcgtaaattcacatgtgacataatatata 105  Q
    |||||||||||||||||| |  || || || | || |||| || |||| |||||||||||||||||||||||||    
T  48757334 cagtggcggagccaggaattacatagagcctgggcgaaaaatttatcgcaaattcacatgtgacataatatata 48757407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 68 - 105
Target Start/End: Original strand, 51817891 - 51817928
Alignment:
Q  68 aaaacttaatcgtaaattcacatgtgacataatatata 105  Q
    |||| ||||||| |||||||||||||||||||||||||    
T  51817891 aaaaattaatcgcaaattcacatgtgacataatatata 51817928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 205 - 265
Target Start/End: Original strand, 16094278 - 16094338
Alignment:
Q  205 tagggttattaattgaaactgaccacgtaatatacgtgaagtctaaaaattgaccctgtaa 265  Q
    |||||||| | ||||||| |||||  |||||||| | ||||||| ||||||||||||||||    
T  16094278 tagggttaattattgaaattgacccagtaatatatgcgaagtctgaaaattgaccctgtaa 16094338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 35 - 118
Target Start/End: Original strand, 19564478 - 19564559
Alignment:
Q  35 tggcggagccaggaaatttatggaacccgagcaaaaacttaatcgtaaattcacatgtgacataatatataaacaatcataaat 118  Q
    |||||||| ||||||||||||||| | || || |||| || |||| || |||| |||||||  |||||||||||| ||||||||    
T  19564478 tggcggagtcaggaaatttatggagctcgggcgaaaaatttatcgcaacttcaaatgtgac--aatatataaacagtcataaat 19564559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 95; Significance: 2e-46; HSPs: 2)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 159 - 281
Target Start/End: Original strand, 479538 - 479660
Alignment:
Q  159 aaataaaagaggtttatcattttatcaacaaaagtgcaatttaaaatagggttattaattgaaactgaccacgtaatatacgtgaagtctaaaaattgac 258  Q
    ||||||| || |||||||||||||||||||||||| |||||||||||||||||||||||| ||| | ||||||||||||||||||||||| |||||||||    
T  479538 aaataaatgaagtttatcattttatcaacaaaagtacaatttaaaatagggttattaatttaaattaaccacgtaatatacgtgaagtctgaaaattgac 479637  T
Q  259 cctgtaattaaataacatgtatt 281  Q
    |||||||||||||||||||||||    
T  479638 cctgtaattaaataacatgtatt 479660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #2
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 32 - 118
Target Start/End: Original strand, 479418 - 479504
Alignment:
Q  32 cagtggcggagccaggaaatttatggaacccgagcaaaaacttaatcgtaaattcacatgtgacataatatataaacaatcataaat 118  Q
    ||||||||||||||||||||||||||| || | || |||| |||||||||||||||||||||| |||||||||||||| ||||||||    
T  479418 cagtggcggagccaggaaatttatggagcctgggcgaaaaattaatcgtaaattcacatgtgatataatatataaacagtcataaat 479504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 95; Significance: 2e-46; HSPs: 41)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 156 - 282
Target Start/End: Original strand, 3647870 - 3647996
Alignment:
Q  156 ttgaaataaaagaggtttatcattttatcaacaaaagtgcaatttaaaatagggttattaattgaaactgaccacgtaatatacgtgaagtctaaaaatt 255  Q
    ||||| |||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||| ||||||| |||||||| |||||||| ||||||    
T  3647870 ttgaattaaaagaggtttatcattttgtcaacaaaagtacaatttaaaatagggttattaattgaaattgaccacataatatacatgaagtctgaaaatt 3647969  T
Q  256 gaccctgtaattaaataacatgtattt 282  Q
     ||||||||||||||||||||||||||    
T  3647970 taccctgtaattaaataacatgtattt 3647996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 159 - 281
Target Start/End: Original strand, 24019472 - 24019594
Alignment:
Q  159 aaataaaagaggtttatcattttatcaacaaaagtgcaatttaaaatagggttattaattgaaactgaccacgtaatatacgtgaagtctaaaaattgac 258  Q
    ||||||| || |||||||||||||||||||||||| |||||||||||||||||||||||| ||| | ||||||||||||||||||||||| |||||||||    
T  24019472 aaataaatgaagtttatcattttatcaacaaaagtacaatttaaaatagggttattaatttaaattaaccacgtaatatacgtgaagtctgaaaattgac 24019571  T
Q  259 cctgtaattaaataacatgtatt 281  Q
    |||||||||||||||||||||||    
T  24019572 cctgtaattaaataacatgtatt 24019594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 159 - 281
Target Start/End: Complemental strand, 28524284 - 28524162
Alignment:
Q  159 aaataaaagaggtttatcattttatcaacaaaagtgcaatttaaaatagggttattaattgaaactgaccacgtaatatacgtgaagtctaaaaattgac 258  Q
    ||||||| || |||||||||||||||||||||||| |||||||||||||||||||||||| ||| | ||||||||||||||||||||||| |||||||||    
T  28524284 aaataaatgaagtttatcattttatcaacaaaagtacaatttaaaatagggttattaatttaaattaaccacgtaatatacgtgaagtctgaaaattgac 28524185  T
Q  259 cctgtaattaaataacatgtatt 281  Q
    |||||||||||||||||||||||    
T  28524184 cctgtaattaaataacatgtatt 28524162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 159 - 281
Target Start/End: Complemental strand, 39915600 - 39915478
Alignment:
Q  159 aaataaaagaggtttatcattttatcaacaaaagtgcaatttaaaatagggttattaattgaaactgaccacgtaatatacgtgaagtctaaaaattgac 258  Q
    ||||||| || |||||||||||||||||||||||| |||||||||||||||||||||||| ||| | ||||||||||||||||||||||| |||||||||    
T  39915600 aaataaatgaagtttatcattttatcaacaaaagtacaatttaaaatagggttattaatttaaattaaccacgtaatatacgtgaagtctgaaaattgac 39915501  T
Q  259 cctgtaattaaataacatgtatt 281  Q
    |||||||||||||||||||||||    
T  39915500 cctgtaattaaataacatgtatt 39915478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 158 - 281
Target Start/End: Original strand, 40469948 - 40470072
Alignment:
Q  158 gaaataaaagaggtttatcattttatcaacaaaagtgcaatttaaaatagggttattaattgaaactgaccacgtaatatacgtgaagtct-aaaaattg 256  Q
    |||||||||||||||  ||||||| ||||||||||| |||||||||||||||||||||||||||| |||||| |||||||||||||||||| ||||||||    
T  40469948 gaaataaaagaggttcctcattttgtcaacaaaagtacaatttaaaatagggttattaattgaaattgaccatgtaatatacgtgaagtctaaaaaattg 40470047  T
Q  257 accctgtaattaaataacatgtatt 281  Q
    |||||||||||||||||||||||||    
T  40470048 accctgtaattaaataacatgtatt 40470072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 158 - 281
Target Start/End: Original strand, 29727465 - 29727588
Alignment:
Q  158 gaaataaaagaggtttatcattttatcaacaaaagtgcaatttaaaatagggttattaattgaaactgaccacgtaatatacgtgaagtctaaaaattga 257  Q
    ||||||||||| |||||||||||| ||||||||||| |||||||||||||||||||||||||||| ||||||||||||||| ||||||||| ||||||||    
T  29727465 gaaataaaagatgtttatcattttgtcaacaaaagtacaatttaaaatagggttattaattgaaattgaccacgtaatatatgtgaagtctgaaaattga 29727564  T
Q  258 ccctgtaattaaataacatgtatt 281  Q
    |  |||||||||||||||||||||    
T  29727565 cattgtaattaaataacatgtatt 29727588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 158 - 282
Target Start/End: Original strand, 34135886 - 34136010
Alignment:
Q  158 gaaataaaagaggtttatcattttatcaacaaaagtgcaatttaaaatagggttattaattgaaactgaccacgtaatatacgtgaagtctaaaaattga 257  Q
    ||||||||||| |||||||||||| |||| |||||| |||||||||||||| ||||||||| ||| |||||| |||||||| ||||||||| ||||||||    
T  34135886 gaaataaaagatgtttatcattttgtcaataaaagtacaatttaaaataggattattaattaaaattgaccatgtaatatatgtgaagtctgaaaattga 34135985  T
Q  258 ccctgtaattaaataacatgtattt 282  Q
    |||||||||||||||||||||||||    
T  34135986 ccctgtaattaaataacatgtattt 34136010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 159 - 269
Target Start/End: Complemental strand, 15839362 - 15839252
Alignment:
Q  159 aaataaaagaggtttatcattttatcaacaaaagtgcaatttaaaatagggttattaattgaaactgaccacgtaatatacgtgaagtctaaaaattgac 258  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||| ||| |||||||||||||||| | |||||| |||||||||    
T  15839362 aaataaaagaggtttatcattttgtcaacaaaagtgcaatttaaaataggattattaattaaaattgaccacgtaatatacttaaagtctgaaaattgac 15839263  T
Q  259 cctgtaattaa 269  Q
    |||||||||||    
T  15839262 cctgtaattaa 15839252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 158 - 282
Target Start/End: Original strand, 16787106 - 16787230
Alignment:
Q  158 gaaataaaagaggtttatcattttatcaacaaaagtgcaatttaaaatagggttattaattgaaactgaccacgtaatatacgtgaagtctaaaaattga 257  Q
    |||||||||||||||||||| ||| |||| |||||| |||||||||||||| ||||||||| ||| |||||| |||||||| |||||||||||||||||     
T  16787106 gaaataaaagaggtttatcaatttgtcaataaaagtacaatttaaaataggcttattaattaaaattgaccatgtaatatatgtgaagtctaaaaattgg 16787205  T
Q  258 ccctgtaattaaataacatgtattt 282  Q
     ||||||||||||||||||||||||    
T  16787206 tcctgtaattaaataacatgtattt 16787230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 158 - 281
Target Start/End: Complemental strand, 36409570 - 36409447
Alignment:
Q  158 gaaataaaagaggtttatcattttatcaacaaaagtgcaatttaaaatagggttattaattgaaactgaccacgtaatatacgtgaagtctaaaaattga 257  Q
    |||||||||||||||||||||||| ||||||||||| |||||||||||| ||||||||||||||| |||||| |||||||||||||||||| ||||||||    
T  36409570 gaaataaaagaggtttatcattttgtcaacaaaagtacaatttaaaata-ggttattaattgaaattgaccatgtaatatacgtgaagtctgaaaattga 36409472  T
Q  258 ccctgt-aattaaataacatgtatt 281  Q
    || ||| |||||||| |||||||||    
T  36409471 ccttgtaaattaaatcacatgtatt 36409447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 156 - 282
Target Start/End: Complemental strand, 4405096 - 4404970
Alignment:
Q  156 ttgaaataaaagaggtttatcattttatcaacaaaagtgcaatttaaaatagggttattaattgaaactgaccacgtaatatacgtgaagtctaaaaatt 255  Q
    |||||||||||||||||||||||||| |||| |||||| |||||||||||| | ||||||||| ||| | |||| |||||||| ||||||||| ||||||    
T  4405096 ttgaaataaaagaggtttatcattttgtcaataaaagtacaatttaaaataagattattaattaaaattaaccatgtaatatatgtgaagtctgaaaatt 4404997  T
Q  256 gaccctgtaattaaataacatgtattt 282  Q
    | |||||||||||||||||||||||||    
T  4404996 ggccctgtaattaaataacatgtattt 4404970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 158 - 281
Target Start/End: Complemental strand, 7279113 - 7278989
Alignment:
Q  158 gaaataaaagaggttt-atcattttatcaacaaaagtgcaatttaaaatagggttattaattgaaactgaccacgtaatatacgtgaagtctaaaaattg 256  Q
    ||||||||| |||||| |||||||  ||||||||||| |||||||||||| | ||||||||||||| ||| ||  ||||||||||||||||| |||||||    
T  7279113 gaaataaaataggttttatcatttagtcaacaaaagtacaatttaaaataagattattaattgaaattgatcatataatatacgtgaagtctgaaaattg 7279014  T
Q  257 accctgtaattaaataacatgtatt 281  Q
     ||||||||||||||||||||||||    
T  7279013 gccctgtaattaaataacatgtatt 7278989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 159 - 282
Target Start/End: Complemental strand, 23403153 - 23403030
Alignment:
Q  159 aaataaaagaggtttatcattttatcaacaaaagtgcaatttaaaatagggttattaattgaaactgaccacgtaatatacgtgaagtctaaaaattgac 258  Q
    |||||||| |||||||||||||| |||| |||||| |||||||||||||| ||||||||| ||| |||||| ||| |||| ||||||||| |||||||      
T  23403153 aaataaaataggtttatcattttgtcaataaaagtacaatttaaaataggattattaattaaaattgaccatgtattatatgtgaagtctgaaaattggt 23403054  T
Q  259 cctgtaattaaataacatgtattt 282  Q
    |||||||||||||||||| |||||    
T  23403053 cctgtaattaaataacatttattt 23403030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 159 - 282
Target Start/End: Complemental strand, 3436319 - 3436195
Alignment:
Q  159 aaataaaagaggtttatcattttatcaacaaaagtgcaatttaaaatagggttattaattgaaactgaccacgtaatatacgtgaagtct-aaaaattga 257  Q
    |||||||| |||||  ||||||| ||||||||||| |||||||||||||||||||||||||||| ||||||  ||| ||||||||||||| ||| |||||    
T  3436319 aaataaaataggttcctcattttgtcaacaaaagtacaatttaaaatagggttattaattgaaattgaccatataagatacgtgaagtctgaaacattga 3436220  T
Q  258 ccctgtaattaaataacatgtattt 282  Q
    || |||| | |||||||||||||||    
T  3436219 ccatgtagtaaaataacatgtattt 3436195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 32 - 118
Target Start/End: Complemental strand, 28524401 - 28524315
Alignment:
Q  32 cagtggcggagccaggaaatttatggaacccgagcaaaaacttaatcgtaaattcacatgtgacataatatataaacaatcataaat 118  Q
    ||||||||||||||||||||||||||| || | || |||| ||||||||||||||||||||||||||||||||||||| ||||||||    
T  28524401 cagtggcggagccaggaaatttatggagcctgggcgaaaaattaatcgtaaattcacatgtgacataatatataaacagtcataaat 28524315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 37 - 118
Target Start/End: Original strand, 29727350 - 29727431
Alignment:
Q  37 gcggagccaggaaatttatggaacccgagcaaaaacttaatcgtaaattcacatgtgacataatatataaacaatcataaat 118  Q
    ||||||||||||||||||||||  ||| ||||||| ||||||||||||||||||||||||||||||||||||| ||||||||    
T  29727350 gcggagccaggaaatttatggagtccgggcaaaaaattaatcgtaaattcacatgtgacataatatataaacagtcataaat 29727431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 32 - 118
Target Start/End: Complemental strand, 29632591 - 29632505
Alignment:
Q  32 cagtggcggagccaggaaatttatggaacccgagcaaaaacttaatcgtaaattcacatgtgacataatatataaacaatcataaat 118  Q
    ||||||||||||||||||||||||||| || | || |||| |||||||||||||||||||||| |||||||||||||| ||||||||    
T  29632591 cagtggcggagccaggaaatttatggagcctgggcgaaaaattaatcgtaaattcacatgtgatataatatataaacagtcataaat 29632505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 32 - 118
Target Start/End: Original strand, 24019355 - 24019441
Alignment:
Q  32 cagtggcggagccaggaaatttatggaacccgagcaaaaacttaatcgtaaattcacatgtgacataatatataaacaatcataaat 118  Q
    ||||||||||||||||||||||||||| || | || |||| |||||||||||||||||||||| |||||||||||| | ||||||||    
T  24019355 cagtggcggagccaggaaatttatggagcctgggcgaaaaattaatcgtaaattcacatgtgatataatatataaatagtcataaat 24019441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 32 - 118
Target Start/End: Complemental strand, 27047019 - 27046933
Alignment:
Q  32 cagtggcggagccaggaaatttatggaacccgagcaaaaacttaatcgtaaattcacatgtgacataatatataaacaatcataaat 118  Q
    |||||||||||||||||||| |||||| |||| ||||||| || |||| ||||| ||||||||||||||||||||||| ||||||||    
T  27047019 cagtggcggagccaggaaatatatggagcccgggcaaaaaatttatcgcaaatttacatgtgacataatatataaacagtcataaat 27046933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 32 - 118
Target Start/End: Complemental strand, 39915717 - 39915631
Alignment:
Q  32 cagtggcggagccaggaaatttatggaacccgagcaaaaacttaatcgtaaattcacatgtgacataatatataaacaatcataaat 118  Q
    ||||||||||||||||||||||||||| || | || |||| |||||||||||||||||||||| |||||||||||| | ||||||||    
T  39915717 cagtggcggagccaggaaatttatggagcctgggcgaaaaattaatcgtaaattcacatgtgatataatatataaatagtcataaat 39915631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 213 - 281
Target Start/End: Complemental strand, 9878251 - 9878183
Alignment:
Q  213 ttaattgaaactgaccacgtaatatacgtgaagtctaaaaattgaccctgtaattaaataacatgtatt 281  Q
    |||||||||| |||||| ||||||||| |||||||| ||||||||||||||||||||||||||||||||    
T  9878251 ttaattgaaattgaccatgtaatatacatgaagtctgaaaattgaccctgtaattaaataacatgtatt 9878183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 159 - 228
Target Start/End: Complemental strand, 42231991 - 42231922
Alignment:
Q  159 aaataaaagaggtttatcattttatcaacaaaagtgcaatttaaaatagggttattaattgaaactgacc 228  Q
    |||||||| |||||||||||||| ||||||||||| |||||||||||||| ||||||||||||| |||||    
T  42231991 aaataaaataggtttatcattttgtcaacaaaagtacaatttaaaataggattattaattgaaattgacc 42231922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 32 - 118
Target Start/End: Original strand, 3647743 - 3647828
Alignment:
Q  32 cagtggcggagccaggaaatttatggaacccgagcaaaaacttaatcgtaaattcacatgtgacataatatataaacaatcataaat 118  Q
    ||||||| || ||||||||||||||||  ||| ||||||| ||||||||||||||||||||| ||||||||||||||| | ||||||    
T  3647743 cagtggcagatccaggaaatttatggagtccgggcaaaaaattaatcgtaaattcacatgtg-cataatatataaacagttataaat 3647828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 158 - 215
Target Start/End: Complemental strand, 27046898 - 27046841
Alignment:
Q  158 gaaataaaagaggtttatcattttatcaacaaaagtgcaatttaaaatagggttatta 215  Q
    |||||||||||||||||||||||| |||||| |||| |||||||||||||||||||||    
T  27046898 gaaataaaagaggtttatcattttgtcaacagaagtacaatttaaaatagggttatta 27046841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 31 - 123
Target Start/End: Complemental strand, 7279241 - 7279149
Alignment:
Q  31 acagtggcggagccaggaaatttatggaacccgagcaaaaacttaatcgtaaattcacatgtgacataatatataaacaatcataaattgaaa 123  Q
    |||||||||||| | |||||||||||||    | ||||||| || |||| ||||||||||| |||||||||||| ||||||||||||||||||    
T  7279241 acagtggcggagtctggaaatttatggagattgggcaaaaaatttatcgcaaattcacatgcgacataatatatcaacaatcataaattgaaa 7279149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 159 - 218
Target Start/End: Complemental strand, 29632472 - 29632413
Alignment:
Q  159 aaataaaagaggtttatcattttatcaacaaaagtgcaatttaaaatagggttattaatt 218  Q
    ||||||| || | |||||||||||||||||||||| ||||||||||||||||||||||||    
T  29632472 aaataaatgaagcttatcattttatcaacaaaagtacaatttaaaatagggttattaatt 29632413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 32 - 106
Target Start/End: Original strand, 24592196 - 24592270
Alignment:
Q  32 cagtggcggagccaggaaatttatggaacccgagcaaaaacttaatcgtaaattcacatgtgacataatatataa 106  Q
    |||||||||||||||||| ||||| || || ||||||||  |||| |||||||||||||||||||||| ||||||    
T  24592196 cagtggcggagccaggaattttatagagcctgagcaaaattttaaccgtaaattcacatgtgacataacatataa 24592270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 38 - 123
Target Start/End: Original strand, 40469866 - 40469951
Alignment:
Q  38 cggagccaggaaatttatggaacccgagcaaaaacttaatcgtaaattcacatgtgacataatatataaacaatcataaattgaaa 123  Q
    ||||||||| |||||||||||  ||| ||||||  || |||||||||||||||| || |||||||||||||| |||||||| ||||    
T  40469866 cggagccagaaaatttatggagtccgggcaaaatatttatcgtaaattcacatgcgatataatatataaacagtcataaatcgaaa 40469951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 32 - 123
Target Start/End: Original strand, 13152253 - 13152344
Alignment:
Q  32 cagtggcggagccaggaaatttatggaacccgagcaaaaacttaatcgtaaattcacatgtgacataatatataaacaatcataaattgaaa 123  Q
    |||||||||||| ||||| ||||| ||  | | ||||||  || |||| ||||||||||| ||||||||||||||| |||||||||||||||    
T  13152253 cagtggcggagctaggaattttatcgagtctgggcaaaattttgatcgcaaattcacatgcgacataatatataaataatcataaattgaaa 13152344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 33 - 123
Target Start/End: Complemental strand, 3436408 - 3436318
Alignment:
Q  33 agtggcggagccaggaaatttatggaacccgagcaaaaacttaatcgtaaattcacatgtgacataatatataaacaatcataaattgaaa 123  Q
    |||| |||||||| ||||||||||||  | | |||||   || |||| ||||||||||||||||||||||||||||| |||||||| ||||    
T  3436408 agtgccggagccaagaaatttatggagtcagggcaaatcatttatcgcaaattcacatgtgacataatatataaacagtcataaatcgaaa 3436318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 32 - 118
Target Start/End: Complemental strand, 42232108 - 42232022
Alignment:
Q  32 cagtggcggagccaggaaatttatggaacccgagcaaaaacttaatcgtaaattcacatgtgacataatatataaacaatcataaat 118  Q
    |||||||||||||||  ||||||||||  | | ||||||| || |||||||||| | |||| | |||||||||||||||||||||||    
T  42232108 cagtggcggagccagataatttatggagtctgggcaaaaaatttatcgtaaatttatatgtaagataatatataaacaatcataaat 42232022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 32 - 118
Target Start/End: Complemental strand, 36409703 - 36409619
Alignment:
Q  32 cagtggcggagccaggaaatttatggaacccgagcaaaaacttaatcgtaaattcacatgtgacataatatataaacaatcataaat 118  Q
    |||||||||||| ||||||||||| || |||| || |||| || |||| |||||||||||||  | |||||||||||| ||||||||    
T  36409703 cagtggcggagctaggaaatttatagagcccgggcgaaaaatttatcgcaaattcacatgtg--aaaatatataaacagtcataaat 36409619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 76 - 123
Target Start/End: Complemental strand, 42447196 - 42447149
Alignment:
Q  76 atcgtaaattcacatgtgacataatatataaacaatcataaattgaaa 123  Q
    |||| ||||||||||||||||||||||||||||| |||||||| ||||    
T  42447196 atcgcaaattcacatgtgacataatatataaacagtcataaatcgaaa 42447149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 68 - 123
Target Start/End: Complemental strand, 15839454 - 15839399
Alignment:
Q  68 aaaacttaatcgtaaattcacatgtgacataatatataaacaatcataaattgaaa 123  Q
    |||| ||||| ||||||||| ||||||||||||||||||||| |||| ||| ||||    
T  15839454 aaaaattaatagtaaattcaaatgtgacataatatataaacagtcatgaatcgaaa 15839399  T

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Target: chr8; HSP #35
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 251 - 282
Target Start/End: Complemental strand, 42231930 - 42231899
Alignment:
Q  251 aaattgaccctgtaattaaataacatgtattt 282  Q
    ||||||||||||||||||||||||||||||||    
T  42231930 aaattgaccctgtaattaaataacatgtattt 42231899  T

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Target: chr8; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 186 - 228
Target Start/End: Original strand, 2727959 - 2728001
Alignment:
Q  186 acaaaagtgcaatttaaaatagggttattaattgaaactgacc 228  Q
    |||||||| |||||||||||| ||||||||||||||| |||||    
T  2727959 acaaaagtacaatttaaaatacggttattaattgaaattgacc 2728001  T

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Target: chr8; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 251 - 281
Target Start/End: Original strand, 2727993 - 2728023
Alignment:
Q  251 aaattgaccctgtaattaaataacatgtatt 281  Q
    |||||||||||||||||||||||||||||||    
T  2727993 aaattgaccctgtaattaaataacatgtatt 2728023  T

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Target: chr8; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 31 - 105
Target Start/End: Complemental strand, 21958831 - 21958757
Alignment:
Q  31 acagtggcggagccaggaaatttatggaacccgagcaaaaacttaatcgtaaattcacatgtgacataatatata 105  Q
    ||||||||||||| ||||| ||||| || |  | ||||||| || |||| ||||||| |||||||||||||||||    
T  21958831 acagtggcggagctaggaattttatagagcttgggcaaaaagtttatcgcaaattcatatgtgacataatatata 21958757  T

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Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 32 - 105
Target Start/End: Complemental strand, 17839645 - 17839572
Alignment:
Q  32 cagtggcggagccaggaaatttatggaacccgagcaaaaacttaatcgtaaattcacatgtgacataatatata 105  Q
    |||||||||||||||||| |  || || || | || |||| || |||| |||||||||||||||||||||||||    
T  17839645 cagtggcggagccaggaattacatagagcctgggcgaaaaatttatcgcaaattcacatgtgacataatatata 17839572  T

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Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 31 - 63
Target Start/End: Original strand, 16786999 - 16787031
Alignment:
Q  31 acagtggcggagccaggaaatttatggaacccg 63  Q
    |||||||||||||||||||||||||||| ||||    
T  16786999 acagtggcggagccaggaaatttatggagcccg 16787031  T

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Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 158 - 206
Target Start/End: Complemental strand, 21958740 - 21958692
Alignment:
Q  158 gaaataaaagaggtttatcattttatcaacaaaagtgcaatttaaaata 206  Q
    |||||||||||||||  ||||||| ||||||||||| |||||| |||||    
T  21958740 gaaataaaagaggttcttcattttttcaacaaaagtacaattttaaata 21958692  T

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Target: scaffold0154 (Bit Score: 84; Significance: 6e-40; HSPs: 2)
Name: scaffold0154
Description:

Target: scaffold0154; HSP #1
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 158 - 281
Target Start/End: Complemental strand, 32301 - 32178
Alignment:
Q  158 gaaataaaagaggtttatcattttatcaacaaaagtgcaatttaaaatagggttattaattgaaactgaccacgtaatatacgtgaagtctaaaaattga 257  Q
    ||||||||| |||||||||||||| ||||||||| | |||||||||||||||||||||||||||| |||||| ||||||||||||||| || |||||| |    
T  32301 gaaataaaaaaggtttatcattttgtcaacaaaaatacaatttaaaatagggttattaattgaaattgaccatgtaatatacgtgaagcctgaaaattta 32202  T
Q  258 ccctgtaattaaataacatgtatt 281  Q
    |||| |||||||||||||||||||    
T  32201 ccctataattaaataacatgtatt 32178  T

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Target: scaffold0154; HSP #2
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 32 - 123
Target Start/End: Complemental strand, 32388 - 32298
Alignment:
Q  32 cagtggcggagccaggaaatttatggaacccgagcaaaaacttaatcgtaaattcacatgtgacataatatataaacaatcataaattgaaa 123  Q
    ||||||||||||||||||||||||||| |||| | ||||| ||| ||| |||||||| | ||||||||||||||||||||||||||| ||||    
T  32388 cagtggcggagccaggaaatttatggagcccgggtaaaaattta-tcgcaaattcacttatgacataatatataaacaatcataaatcgaaa 32298  T

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Target: scaffold0178 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 2)
Name: scaffold0178
Description:

Target: scaffold0178; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 33 - 99
Target Start/End: Original strand, 21945 - 22011
Alignment:
Q  33 agtggcggagccaggaaatttatggaacccgagcaaaaacttaatcgtaaattcacatgtgacataa 99  Q
    |||||||||||||||||||||||||| |||  ||||||| || |||| |||||||||||||||||||    
T  21945 agtggcggagccaggaaatttatggagcccaggcaaaaaatttatcgcaaattcacatgtgacataa 22011  T

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Target: scaffold0178; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 33 - 99
Target Start/End: Original strand, 27447 - 27513
Alignment:
Q  33 agtggcggagccaggaaatttatggaacccgagcaaaaacttaatcgtaaattcacatgtgacataa 99  Q
    |||||||||||||||||||||||||| |||  ||||||| || |||| |||||||||||||||||||    
T  27447 agtggcggagccaggaaatttatggagcccaggcaaaaaatttatcgcaaattcacatgtgacataa 27513  T

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Target: scaffold0015 (Bit Score: 31; Significance: 0.00000003; HSPs: 2)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 31 - 105
Target Start/End: Original strand, 214017 - 214091
Alignment:
Q  31 acagtggcggagccaggaaatttatggaacccgagcaaaaacttaatcgtaaattcacatgtgacataatatata 105  Q
    ||||||||||||| ||||| ||||| || |  | ||||||| || |||| ||||||| |||||||||||||||||    
T  214017 acagtggcggagctaggaattttatagagcttgggcaaaaagtttatcgcaaattcatatgtgacataatatata 214091  T

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Target: scaffold0015; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 158 - 206
Target Start/End: Original strand, 214108 - 214156
Alignment:
Q  158 gaaataaaagaggtttatcattttatcaacaaaagtgcaatttaaaata 206  Q
    |||||||||||||||  ||||||| ||||||||||| |||||| |||||    
T  214108 gaaataaaagaggttcttcattttttcaacaaaagtacaattttaaata 214156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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