View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1539_low_24 (Length: 209)

Name: NF1539_low_24
Description: NF1539
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1539_low_24
NF1539_low_24
[»] chr8 (41 HSPs)
chr8 (13-188)||(34861126-34861298)
chr8 (77-188)||(17499233-17499344)
chr8 (77-188)||(16983463-16983576)
chr8 (91-188)||(24055939-24056036)
chr8 (88-188)||(1977184-1977284)
chr8 (91-188)||(8903921-8904018)
chr8 (91-185)||(6098791-6098885)
chr8 (83-192)||(9952762-9952872)
chr8 (99-188)||(14236407-14236496)
chr8 (81-188)||(5979949-5980057)
chr8 (117-188)||(8914840-8914911)
chr8 (94-188)||(13214564-13214658)
chr8 (66-188)||(28413857-28413980)
chr8 (99-188)||(32072166-32072255)
chr8 (86-181)||(7493351-7493447)
chr8 (105-188)||(43506604-43506687)
chr8 (78-188)||(35151728-35151840)
chr8 (91-188)||(36804853-36804950)
chr8 (99-188)||(41727499-41727588)
chr8 (77-188)||(9193451-9193564)
chr8 (78-185)||(11962681-11962789)
chr8 (78-188)||(13407322-13407435)
chr8 (78-143)||(5095759-5095826)
chr8 (124-188)||(35819201-35819265)
chr8 (135-186)||(1961353-1961404)
chr8 (94-188)||(4674975-4675069)
chr8 (77-192)||(4319733-4319848)
chr8 (105-188)||(17741555-17741638)
chr8 (106-188)||(31301184-31301265)
chr8 (79-125)||(44742333-44742379)
chr8 (132-185)||(9192073-9192126)
chr8 (93-188)||(6387630-6387726)
chr8 (91-188)||(23685200-23685293)
chr8 (92-143)||(5727346-5727397)
chr8 (121-188)||(35797464-35797531)
chr8 (99-192)||(9453527-9453621)
chr8 (91-181)||(26637556-26637645)
chr8 (94-188)||(34952512-34952606)
chr8 (139-188)||(17716920-17716969)
chr8 (79-136)||(8671070-8671129)
chr8 (99-147)||(28700577-28700625)
[»] chr6 (24 HSPs)
chr6 (79-188)||(34905405-34905516)
chr6 (77-188)||(12780759-12780870)
chr6 (81-188)||(16851975-16852084)
chr6 (77-188)||(5106367-5106480)
chr6 (105-185)||(16187460-16187540)
chr6 (105-185)||(16187678-16187758)
chr6 (77-188)||(1392697-1392809)
chr6 (99-188)||(445887-445976)
chr6 (99-188)||(2675964-2676053)
chr6 (91-188)||(10133172-10133269)
chr6 (91-192)||(32112731-32112832)
chr6 (77-176)||(17144671-17144770)
chr6 (91-193)||(12753774-12753876)
chr6 (94-167)||(8441866-8441939)
chr6 (94-167)||(8450670-8450743)
chr6 (99-188)||(31116146-31116235)
chr6 (91-185)||(21987364-21987458)
chr6 (92-167)||(12784954-12785029)
chr6 (106-188)||(32122864-32122946)
chr6 (91-193)||(32598962-32599064)
chr6 (78-188)||(19090213-19090326)
chr6 (77-184)||(16436137-16436246)
chr6 (131-188)||(31444028-31444085)
chr6 (148-188)||(35128794-35128834)
[»] chr3 (53 HSPs)
chr3 (80-188)||(18427153-18427261)
chr3 (78-188)||(41451894-41452006)
chr3 (71-188)||(37776695-37776814)
chr3 (78-188)||(24734774-24734886)
chr3 (91-188)||(28529322-28529417)
chr3 (77-188)||(52123954-52124067)
chr3 (91-188)||(20493459-20493556)
chr3 (80-188)||(46450134-46450244)
chr3 (94-188)||(8824996-8825090)
chr3 (78-188)||(38414716-38414826)
chr3 (91-189)||(46161015-46161113)
chr3 (80-192)||(27243110-27243225)
chr3 (91-167)||(29588747-29588823)
chr3 (92-168)||(50156675-50156751)
chr3 (99-193)||(55452037-55452131)
chr3 (91-188)||(20791365-20791462)
chr3 (77-185)||(5452060-5452168)
chr3 (105-188)||(10948588-10948671)
chr3 (80-188)||(14236088-14236198)
chr3 (91-178)||(29755579-29755666)
chr3 (110-188)||(752461-752539)
chr3 (80-188)||(46576017-46576126)
chr3 (110-188)||(742025-742103)
chr3 (94-192)||(2419481-2419579)
chr3 (94-168)||(29388611-29388685)
chr3 (78-179)||(41707440-41707541)
chr3 (91-188)||(48351505-48351602)
chr3 (91-183)||(2009068-2009160)
chr3 (79-164)||(15790370-15790456)
chr3 (109-188)||(19345032-19345111)
chr3 (105-168)||(24429053-24429116)
chr3 (110-185)||(38138615-38138690)
chr3 (126-188)||(26310495-26310557)
chr3 (77-188)||(43016482-43016595)
chr3 (107-188)||(22604629-22604710)
chr3 (99-176)||(41387642-41387719)
chr3 (124-188)||(49072074-49072138)
chr3 (77-178)||(29718849-29718952)
chr3 (105-162)||(37285378-37285435)
chr3 (92-167)||(45515512-45515585)
chr3 (130-192)||(42340896-42340958)
chr3 (91-188)||(44844050-44844148)
chr3 (111-188)||(20586885-20586962)
chr3 (125-163)||(22856282-22856320)
chr3 (79-130)||(27243047-27243100)
chr3 (105-191)||(36751002-36751088)
chr3 (77-114)||(930641-930678)
chr3 (91-188)||(39186033-39186130)
chr3 (91-175)||(49418433-49418518)
chr3 (124-192)||(50661568-50661637)
chr3 (80-188)||(13809150-13809261)
chr3 (84-137)||(30624739-30624794)
chr3 (77-176)||(41607492-41607589)
[»] chr5 (37 HSPs)
chr5 (91-188)||(28490736-28490833)
chr5 (77-188)||(41330393-41330504)
chr5 (77-188)||(41105568-41105681)
chr5 (99-188)||(10141998-10142087)
chr5 (78-188)||(34368429-34368541)
chr5 (77-188)||(37455418-37455534)
chr5 (91-176)||(28223790-28223875)
chr5 (115-188)||(39246677-39246750)
chr5 (77-188)||(5413732-5413848)
chr5 (105-188)||(28434846-28434927)
chr5 (105-168)||(14553601-14553664)
chr5 (99-188)||(25710494-25710583)
chr5 (105-188)||(17537130-17537213)
chr5 (110-189)||(28090262-28090341)
chr5 (91-157)||(30325888-30325954)
chr5 (91-188)||(34384705-34384802)
chr5 (107-188)||(43405462-43405543)
chr5 (94-188)||(1923569-1923663)
chr5 (116-185)||(25630879-25630948)
chr5 (91-188)||(25919280-25919377)
chr5 (78-188)||(28611777-28611889)
chr5 (124-188)||(31885878-31885942)
chr5 (124-176)||(36337937-36337989)
chr5 (116-181)||(10666727-10666792)
chr5 (105-188)||(10950155-10950238)
chr5 (99-166)||(34479973-34480040)
chr5 (91-141)||(2935445-2935495)
chr5 (80-187)||(4714819-4714928)
chr5 (105-188)||(24990955-24991039)
chr5 (80-148)||(12076063-12076133)
chr5 (105-156)||(17434877-17434928)
chr5 (80-183)||(32401191-32401297)
chr5 (108-150)||(5465683-5465725)
chr5 (78-188)||(17568700-17568813)
chr5 (91-188)||(27592466-27592563)
chr5 (105-188)||(24915124-24915208)
chr5 (91-162)||(25002019-25002091)
[»] chr4 (47 HSPs)
chr4 (77-188)||(43771195-43771308)
chr4 (92-188)||(722226-722322)
chr4 (92-188)||(754595-754691)
chr4 (78-188)||(24834647-24834759)
chr4 (77-188)||(8109025-8109138)
chr4 (77-184)||(26361306-26361415)
chr4 (77-188)||(39471226-39471339)
chr4 (81-187)||(47009259-47009367)
chr4 (77-185)||(50164467-50164577)
chr4 (81-179)||(20454616-20454716)
chr4 (77-188)||(49077318-49077431)
chr4 (78-188)||(22542450-22542562)
chr4 (77-185)||(34129398-34129508)
chr4 (77-188)||(24938413-24938526)
chr4 (77-188)||(45310946-45311059)
chr4 (77-188)||(49242239-49242352)
chr4 (119-193)||(20225383-20225457)
chr4 (91-167)||(37451027-37451103)
chr4 (79-188)||(48339340-48339451)
chr4 (110-182)||(50652369-50652441)
chr4 (110-181)||(46536295-46536366)
chr4 (82-188)||(10169648-10169756)
chr4 (99-188)||(33653511-33653600)
chr4 (94-155)||(40991606-40991667)
chr4 (108-193)||(45081773-45081858)
chr4 (80-188)||(19447200-19447311)
chr4 (116-188)||(50481584-50481656)
chr4 (77-188)||(31250880-31250994)
chr4 (91-188)||(25719126-25719224)
chr4 (95-189)||(29699557-29699650)
chr4 (92-188)||(52671899-52671995)
chr4 (77-160)||(11895134-11895220)
chr4 (133-188)||(46242000-46242055)
chr4 (124-194)||(41153245-41153315)
chr4 (77-188)||(43124512-43124625)
chr4 (94-166)||(52279276-52279348)
chr4 (105-176)||(5044568-5044639)
chr4 (91-188)||(5545647-5545745)
chr4 (110-166)||(2860968-2861024)
chr4 (82-137)||(25719231-25719286)
chr4 (77-157)||(38537511-38537593)
chr4 (111-166)||(46287532-46287587)
chr4 (122-188)||(13520018-13520084)
chr4 (105-182)||(34961727-34961801)
chr4 (91-188)||(19937186-19937283)
chr4 (147-188)||(30867002-30867043)
chr4 (77-120)||(11127856-11127900)
[»] chr1 (47 HSPs)
chr1 (77-188)||(8899083-8899196)
chr1 (78-188)||(30678910-30679022)
chr1 (77-188)||(10659767-10659879)
chr1 (77-188)||(6133623-6133735)
chr1 (91-181)||(41948160-41948250)
chr1 (95-188)||(33193119-33193212)
chr1 (99-188)||(41958152-41958241)
chr1 (77-188)||(11987695-11987808)
chr1 (77-188)||(28218044-28218159)
chr1 (99-188)||(29673544-29673633)
chr1 (91-188)||(19101615-19101712)
chr1 (79-188)||(26980262-26980373)
chr1 (91-178)||(15468299-15468386)
chr1 (114-188)||(3872671-3872745)
chr1 (91-188)||(2225293-2225390)
chr1 (91-176)||(8741237-8741322)
chr1 (99-188)||(35336929-35337018)
chr1 (91-167)||(12767342-12767418)
chr1 (93-188)||(33114040-33114135)
chr1 (126-188)||(49730933-49730995)
chr1 (78-188)||(931443-931555)
chr1 (91-188)||(25543409-25543505)
chr1 (78-188)||(27570294-27570406)
chr1 (91-188)||(32211798-32211895)
chr1 (91-187)||(37552965-37553059)
chr1 (106-163)||(51732371-51732428)
chr1 (91-194)||(15928618-15928719)
chr1 (105-188)||(45179274-45179357)
chr1 (99-188)||(44271987-44272076)
chr1 (77-143)||(39974198-39974266)
chr1 (111-176)||(47644331-47644396)
chr1 (78-151)||(16948528-16948603)
chr1 (91-183)||(33059907-33059999)
chr1 (105-188)||(31866385-31866467)
chr1 (119-193)||(37525593-37525667)
chr1 (118-183)||(15906614-15906679)
chr1 (91-188)||(15523279-15523372)
chr1 (91-188)||(15531273-15531366)
chr1 (91-188)||(22540437-22540530)
chr1 (109-189)||(31074784-31074863)
chr1 (91-137)||(21466634-21466680)
chr1 (91-168)||(36566985-36567056)
chr1 (79-188)||(11135808-11135920)
chr1 (80-188)||(28941891-28942000)
chr1 (91-167)||(39499484-39499563)
chr1 (105-184)||(50424893-50424973)
chr1 (124-188)||(50539193-50539257)
[»] chr7 (49 HSPs)
chr7 (64-188)||(27888351-27888477)
chr7 (77-184)||(22190012-22190121)
chr7 (91-188)||(6580016-6580113)
chr7 (99-188)||(12263458-12263547)
chr7 (78-188)||(27949342-27949454)
chr7 (80-194)||(48374440-48374556)
chr7 (77-188)||(14795200-14795311)
chr7 (77-188)||(15242192-15242303)
chr7 (77-185)||(46517363-46517473)
chr7 (77-188)||(11692248-11692361)
chr7 (77-179)||(44350800-44350904)
chr7 (77-188)||(11824140-11824251)
chr7 (91-182)||(39254158-39254249)
chr7 (77-188)||(6442234-6442347)
chr7 (91-185)||(27320446-27320540)
chr7 (77-181)||(25686833-25686939)
chr7 (77-188)||(7775069-7775181)
chr7 (92-188)||(32205145-32205241)
chr7 (117-188)||(31502504-31502575)
chr7 (91-188)||(33008173-33008267)
chr7 (81-188)||(32212872-32212980)
chr7 (77-183)||(7459417-7459525)
chr7 (79-162)||(19422838-19422919)
chr7 (122-182)||(36845567-36845627)
chr7 (105-188)||(31731283-31731366)
chr7 (92-158)||(7774944-7775009)
chr7 (96-166)||(32178823-32178893)
chr7 (91-188)||(10933979-10934076)
chr7 (99-156)||(31874117-31874174)
chr7 (80-188)||(24539123-24539234)
chr7 (124-188)||(25092708-25092772)
chr7 (83-152)||(36845495-36845566)
chr7 (99-149)||(12167315-12167365)
chr7 (78-188)||(13919849-13919962)
chr7 (118-188)||(23564076-23564146)
chr7 (77-182)||(31759838-31759943)
chr7 (80-188)||(17749763-17749874)
chr7 (80-188)||(45909525-45909636)
chr7 (93-156)||(31628100-31628163)
chr7 (91-178)||(32605410-32605497)
chr7 (118-168)||(3855851-3855901)
chr7 (122-188)||(9648993-9649059)
chr7 (78-188)||(14759712-14759825)
chr7 (106-143)||(1316387-1316424)
chr7 (147-188)||(12271055-12271095)
chr7 (147-188)||(19494409-19494450)
chr7 (156-188)||(8073367-8073399)
chr7 (78-130)||(26703565-26703617)
chr7 (111-163)||(27248480-27248532)
[»] scaffold0018 (1 HSPs)
scaffold0018 (80-188)||(27881-27991)
[»] chr2 (35 HSPs)
chr2 (79-188)||(9470150-9470260)
chr2 (80-188)||(10981587-10981695)
chr2 (77-188)||(26767759-26767872)
chr2 (91-188)||(38464232-38464329)
chr2 (80-188)||(12989260-12989370)
chr2 (91-188)||(15884498-15884595)
chr2 (77-181)||(6980118-6980224)
chr2 (78-182)||(32856134-32856240)
chr2 (105-188)||(44274303-44274386)
chr2 (118-188)||(7919311-7919381)
chr2 (91-164)||(45554652-45554725)
chr2 (110-194)||(34142172-34142256)
chr2 (92-167)||(19639183-19639258)
chr2 (92-167)||(19837776-19837851)
chr2 (91-188)||(11539494-11539592)
chr2 (77-188)||(35316399-35316512)
chr2 (77-188)||(36471836-36471949)
chr2 (82-162)||(4552843-4552925)
chr2 (92-178)||(472178-472264)
chr2 (106-164)||(14489568-14489626)
chr2 (91-162)||(30718341-30718412)
chr2 (110-184)||(3804658-3804732)
chr2 (77-180)||(12098866-12098970)
chr2 (91-168)||(25238291-25238368)
chr2 (106-183)||(27494480-27494557)
chr2 (95-188)||(37652263-37652356)
chr2 (125-185)||(16719478-16719538)
chr2 (99-153)||(33678138-33678192)
chr2 (123-188)||(18511255-18511320)
chr2 (105-162)||(24497287-24497344)
chr2 (111-182)||(17188140-17188211)
chr2 (110-185)||(32701542-32701617)
chr2 (77-162)||(43414450-43414536)
chr2 (78-130)||(10339769-10339821)
chr2 (105-149)||(17460974-17461018)
[»] scaffold0204 (1 HSPs)
scaffold0204 (79-188)||(26862-26973)
[»] scaffold0543 (1 HSPs)
scaffold0543 (120-185)||(9736-9801)
[»] scaffold0492 (1 HSPs)
scaffold0492 (120-185)||(11282-11347)
[»] scaffold0016 (1 HSPs)
scaffold0016 (77-188)||(204706-204819)
[»] scaffold0008 (1 HSPs)
scaffold0008 (77-132)||(121199-121255)
[»] scaffold0099 (1 HSPs)
scaffold0099 (150-188)||(27382-27420)
[»] scaffold0194 (1 HSPs)
scaffold0194 (91-160)||(8425-8494)


Alignment Details
Target: chr8 (Bit Score: 143; Significance: 3e-75; HSPs: 41)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 13 - 188
Target Start/End: Original strand, 34861126 - 34861298
Alignment:
Q  13 gataattctagattaagatgacatcaagaatatataatttccactccatgcattttttagagactaatgctagcaaca--ctcttttgaacaccctctct 110  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||| ||    
T  34861126 gataattctagattaagatgacatcaagaatatataatttccactccatgcattttttagagactaatgctagcaacactctcttttgaacaccctccct 34861225  T
Q  111 aatactcactctcttattggtttaaattattgtgggtctacactttgaaaattgaacctacacaaagtggtgggacat 188  Q
    ||||||||||||||||||||||||||||||||||||     |||||||||||||||||||||||||||||||||||||    
T  34861226 aatactcactctcttattggtttaaattattgtggg-----actttgaaaattgaacctacacaaagtggtgggacat 34861298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 77 - 188
Target Start/End: Original strand, 17499233 - 17499344
Alignment:
Q  77 taatgctagcaacactcttttgaacaccctctctaatactcactctcttattggtttaaattattgtgggtctacactttgaaaattgaacctacacaaa 176  Q
    |||||||||||||||||||||||  || ||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||| |||||||    
T  17499233 taatgctagcaacactcttttgacaactctctctaatactcactctcttattggtttaaatcattgtggatctacactttgaaaattgaaccaacacaaa 17499332  T
Q  177 gtggtgggacat 188  Q
     |||||||||||    
T  17499333 atggtgggacat 17499344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 77 - 188
Target Start/End: Complemental strand, 16983576 - 16983463
Alignment:
Q  77 taatgctagcaacactct--tttgaacaccctctctaatactcactctcttattggtttaaattattgtgggtctacactttgaaaattgaacctacaca 174  Q
    ||||||||||||||||||  ||||||||| ||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||  ||||    
T  16983576 taatgctagcaacactctcttttgaacactctctctaatactcactctcttattggtttaaatcattgtgagtctacactttgaaaattgaacccccaca 16983477  T
Q  175 aagtggtgggacat 188  Q
    ||||| ||||||||    
T  16983476 aagtgatgggacat 16983463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 91 - 188
Target Start/End: Original strand, 24055939 - 24056036
Alignment:
Q  91 ctcttttgaacaccctctctaatactcactctcttattggtttaaattattgtgggtctacactttgaaaattgaacctacacaaagtggtgggacat 188  Q
    |||||||||||||  ||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  24055939 ctcttttgaacactttctctaacactcactctcttattggtttaaataattgtgggtctacactttgaaaattgaacttacacaaagtggtgggacat 24056036  T

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Target: chr8; HSP #5
Raw Score: 77; E-Value: 6e-36
Query Start/End: Original strand, 88 - 188
Target Start/End: Original strand, 1977184 - 1977284
Alignment:
Q  88 acactcttttgaacaccctctctaatactcactctcttattggtttaaattattgtgggtctacactttgaaaattgaacctacacaaagtggtgggaca 187  Q
    |||||||||||||||| |||||||||||||||||| |||||||||||||| ||||||| |||||||||||||||||||||| |||||||||||| |||||    
T  1977184 acactcttttgaacacactctctaatactcactcttttattggtttaaatcattgtggatctacactttgaaaattgaacccacacaaagtggttggaca 1977283  T
Q  188 t 188  Q
    |    
T  1977284 t 1977284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 70; E-Value: 9e-32
Query Start/End: Original strand, 91 - 188
Target Start/End: Complemental strand, 8904018 - 8903921
Alignment:
Q  91 ctcttttgaacaccctctctaatactcactctcttattggtttaaattattgtgggtctacactttgaaaattgaacctacacaaagtggtgggacat 188  Q
    |||||||||||| | | |||| |||| |||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||    
T  8904018 ctcttttgaacatcttttctattacttactctcttattggtttaaatcattgtgggtctacactttgaaaattgaaccgacacaaagtggtgggacat 8903921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 91 - 185
Target Start/End: Original strand, 6098791 - 6098885
Alignment:
Q  91 ctcttttgaacaccctctctaatactcactctcttattggtttaaattattgtgggtctacactttgaaaattgaacctacacaaagtggtggga 185  Q
    ||||||| ||||  ||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||| | |||||||||||||||    
T  6098791 ctcttttaaacattctctctaatactcactctcttattgatttaaattattgtggatctacactttgaaaattgaacatgcacaaagtggtggga 6098885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 83 - 192
Target Start/End: Original strand, 9952762 - 9952872
Alignment:
Q  83 tagcaacactct-tttgaacaccctctctaatactcactctcttattggtttaaattattgtgggtctacactttgaaaattgaacctacacaaagtggt 181  Q
    |||||||||||| ||||||||| ||||  |||||||| | |||||||||||||||| ||||||||| |||||||||||||||||||  ||||||||||||    
T  9952762 tagcaacactctctttgaacactctcttaaatactcattatcttattggtttaaatcattgtgggtttacactttgaaaattgaactcacacaaagtggt 9952861  T
Q  182 gggacatgcat 192  Q
    |||||||||||    
T  9952862 gggacatgcat 9952872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 99 - 188
Target Start/End: Complemental strand, 14236496 - 14236407
Alignment:
Q  99 aacaccctctctaatactcactctcttattggtttaaattattgtgggtctacactttgaaaattgaacctacacaaagtggtgggacat 188  Q
    ||||| ||||||||||||||||||||| |||||||||||||||||| | ||||||||| |||||||||| ||||||||||||||||||||    
T  14236496 aacactctctctaatactcactctcttgttggtttaaattattgtgcgcctacactttcaaaattgaacttacacaaagtggtgggacat 14236407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 81 - 188
Target Start/End: Complemental strand, 5980057 - 5979949
Alignment:
Q  81 gctagcaacactct--tttgaacaccctctctaatactcactctcttattggtttaaattattgtgggtctacactttgaaaattgaacctacacaaagt 178  Q
    ||||||||||||||  ||||||||| |||||||||||||||||||||||||| |||||  |||||| ||  ||||||||||||||||||| |||||||||    
T  5980057 gctagcaacactctcttttgaacactctctctaatactcactctcttattgg-ttaaaccattgtgagttcacactttgaaaattgaacccacacaaagt 5979959  T
Q  179 ggtgggacat 188  Q
    ||||||||||    
T  5979958 ggtgggacat 5979949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 117 - 188
Target Start/End: Complemental strand, 8914911 - 8914840
Alignment:
Q  117 cactctcttattggtttaaattattgtgggtctacactttgaaaattgaacctacacaaagtggtgggacat 188  Q
    ||||||||||||||||||||| ||||||||||||||||||||||| |||||| |||||||||||||||||||    
T  8914911 cactctcttattggtttaaatcattgtgggtctacactttgaaaaatgaacccacacaaagtggtgggacat 8914840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 94 - 188
Target Start/End: Complemental strand, 13214658 - 13214564
Alignment:
Q  94 ttttgaacaccctctctaatactcactctcttattggtttaaattattgtgggtctacactttgaaaattgaacctacacaaagtggtgggacat 188  Q
    |||||||||| ||| ||||||||| |||||||||| ||||| | ||||||||||||||||||||||||||||| ||||||||| || ||||||||    
T  13214658 ttttgaacactctccctaatactcgctctcttattagtttataatattgtgggtctacactttgaaaattgaatctacacaaaatgatgggacat 13214564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 66 - 188
Target Start/End: Original strand, 28413857 - 28413980
Alignment:
Q  66 tttttagagactaatgctagca--acactcttttgaacaccctctctaatactcactctcttattggtttaaattattgtgggtctacactttgaaaatt 163  Q
    |||| ||||| |||||||||||  || ||||||||||||| | | |||||||||| ||| |||||||||||||| ||| |||||||| ||||||||||||    
T  28413857 ttttaagagagtaatgctagcagtactctcttttgaacactcgc-ctaatactcattcttttattggtttaaatcattatgggtctatactttgaaaatt 28413955  T
Q  164 gaacctacacaaagtggtgggacat 188  Q
    ||||  |||||||||||||||||||    
T  28413956 gaactcacacaaagtggtgggacat 28413980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 99 - 188
Target Start/End: Complemental strand, 32072255 - 32072166
Alignment:
Q  99 aacaccctctctaatactcactctcttattggtttaaattattgtgggtctacactttgaaaattgaacctacacaaagtggtgggacat 188  Q
    ||||| ||||||||| | || |||||||||| ||||||| |||||||||||||||||| ||||||||||| |||||||||||||||||||    
T  32072255 aacactctctctaatgcccattctcttattgatttaaataattgtgggtctacactttaaaaattgaacccacacaaagtggtgggacat 32072166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 86 - 181
Target Start/End: Original strand, 7493351 - 7493447
Alignment:
Q  86 caacactcttttgaacaccctctctaatactcactctcttattggtttaaattattgtgggtctacactttgaaaattgaa-cctacacaaagtggt 181  Q
    |||| ||||| ||||||| || |||||||||||||||||||||||||||||| |||||| ||||||||||||||||| ||| || ||||||||||||    
T  7493351 caactctcttatgaacactctttctaatactcactctcttattggtttaaatcattgtgagtctacactttgaaaatagaacccaacacaaagtggt 7493447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 105 - 188
Target Start/End: Complemental strand, 43506687 - 43506604
Alignment:
Q  105 ctctctaatactcactctcttattggtttaaattattgtgggtctacactttgaaaattgaacctacacaaagtggtgggacat 188  Q
    |||||||||||||||||||||||||| |||||| ||||||||||||||| |||||| | ||||| |||||||||||||| ||||    
T  43506687 ctctctaatactcactctcttattggcttaaatcattgtgggtctacacattgaaagtagaacccacacaaagtggtggaacat 43506604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 78 - 188
Target Start/End: Original strand, 35151728 - 35151840
Alignment:
Q  78 aatgctagcaacactct--tttgaacaccctctctaatactcactctcttattggtttaaattattgtgggtctacactttgaaaattgaacctacacaa 175  Q
    |||||||||||||||||  ||||||||| || | ||||| ||||| ||||||| |||| |||||||||||||||||||||| ||||||||| |  |||||    
T  35151728 aatgctagcaacactctcttttgaacactctatttaatattcactttcttattagtttgaattattgtgggtctacactttaaaaattgaatccccacaa 35151827  T
Q  176 agtggtgggacat 188  Q
    | |||||||||||    
T  35151828 aatggtgggacat 35151840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 91 - 188
Target Start/End: Original strand, 36804853 - 36804950
Alignment:
Q  91 ctcttttgaacaccctctctaatactcactctcttattggtttaaattattgtgggtctacactttgaaaattgaacctacacaaagtggtgggacat 188  Q
    ||||||| ||||  |||||||||||| |||||||||||| ||||||||||||||| | || | ||||||||||||||| ||||||| |||||||||||    
T  36804853 ctcttttcaacattctctctaatacttactctcttattgatttaaattattgtggatgtatattttgaaaattgaacccacacaaaatggtgggacat 36804950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 99 - 188
Target Start/End: Complemental strand, 41727588 - 41727499
Alignment:
Q  99 aacaccctctctaatactcactctcttattggtttaaattattgtgggtctacactttgaaaattgaacctacacaaagtggtgggacat 188  Q
    ||||| ||||||||||||||||||||| ||||||||||| ||| || |||||||| || ||||  |||||||||||||| ||||||||||    
T  41727588 aacactctctctaatactcactctcttgttggtttaaatcattatgagtctacacattaaaaacagaacctacacaaagcggtgggacat 41727499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 77 - 188
Target Start/End: Complemental strand, 9193564 - 9193451
Alignment:
Q  77 taatgctagcaacactct--tttgaacaccctctctaatactcactctcttattggtttaaattattgtgggtctacactttgaaaattgaacctacaca 174  Q
    ||||||||||||||||||  |||| ||||  ||  |||||| || | | |||||||||| ||||||||| ||||||||||||||||||||||| ||||||    
T  9193564 taatgctagcaacactctcttttgtacacgatcattaatacacatttttttattggttttaattattgtaggtctacactttgaaaattgaacttacaca 9193465  T
Q  175 aagtggtgggacat 188  Q
    |||| ||| |||||    
T  9193464 aagtagtgagacat 9193451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 78 - 185
Target Start/End: Original strand, 11962681 - 11962789
Alignment:
Q  78 aatgctagcaaca--ctcttttgaacaccctctctaatactcactctcttattggtttaaattattgtgggtctacactttgaaaattgaacctacacaa 175  Q
    |||||||||||||  ||||||||||||| ||   |||||||| || | |||||||||||||| ||| ||| |||||||||||||||||||||||||| ||    
T  11962681 aatgctagcaacatcctcttttgaacactcttgttaatactcgcttttttattggtttaaatcatt-tggatctacactttgaaaattgaacctacataa 11962779  T
Q  176 agtggtggga 185  Q
    | ||||||||    
T  11962780 aatggtggga 11962789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 78 - 188
Target Start/End: Original strand, 13407322 - 13407435
Alignment:
Q  78 aatgctagcaacactct--tttgaacaccctctctaatactcactctcttattggtttaaattattgtgggtc-tacactttgaaaattgaacctacaca 174  Q
    |||||||||||||||||  ||||||||| |||||||| ||||| ||||| ||||| |||||| | |||||||| |||||||||||||| ||||| ||  |    
T  13407322 aatgctagcaacactctcttttgaacactctctctaacactcattctctcattgggttaaatcaatgtgggtcatacactttgaaaatagaacccactta 13407421  T
Q  175 aagtggtgggacat 188  Q
    || |||||||||||    
T  13407422 aaatggtgggacat 13407435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 78 - 143
Target Start/End: Original strand, 5095759 - 5095826
Alignment:
Q  78 aatgctagcaacactc--ttttgaacaccctctctaatactcactctcttattggtttaaattattgt 143  Q
    |||||||| |||||||  |||| |||| |||||||||||||||||||||||||||||||||| |||||    
T  5095759 aatgctaggaacactcacttttaaacatcctctctaatactcactctcttattggtttaaatcattgt 5095826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 124 - 188
Target Start/End: Complemental strand, 35819265 - 35819201
Alignment:
Q  124 ttattggtttaaattattgtgggtctacactttgaaaattgaacctacacaaagtggtgggacat 188  Q
    ||||| |||||||| |||||||||||| |||||||||||||| || ||||||| |||||||||||    
T  35819265 ttattagtttaaatcattgtgggtctatactttgaaaattgagcccacacaaaatggtgggacat 35819201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 135 - 186
Target Start/End: Complemental strand, 1961404 - 1961353
Alignment:
Q  135 aattattgtgggtctacactttgaaaattgaacctacacaaagtggtgggac 186  Q
    ||||||||| |||||||||||||||||||||||| || ||||||||||||||    
T  1961404 aattattgttggtctacactttgaaaattgaacccacgcaaagtggtgggac 1961353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 94 - 188
Target Start/End: Complemental strand, 4675069 - 4674975
Alignment:
Q  94 ttttgaacaccctctctaatactcactctcttattggtttaaattattgtgggtctacactttgaaaattgaacctacacaaagtggtgggacat 188  Q
    |||||||||| || ||||||| ||| | | |||||||||||||| |||||| | |||||||||||||||| |||  |||||||||| | ||||||    
T  4675069 ttttgaacactctttctaatattcatttttttattggtttaaatcattgtgtgactacactttgaaaattaaactcacacaaagtgataggacat 4674975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 77 - 192
Target Start/End: Original strand, 4319733 - 4319848
Alignment:
Q  77 taatgctagcaacactcttttgaacaccctctctaatactcactctcttattggtttaaattattgtgggtctacactttgaaaattgaacctacacaaa 176  Q
    ||||| |||||||| | |||| ||||  |||||||| | ||| | | |||||| ||||||||| ||| ||||||||||||||||||| ||   |||||||    
T  4319733 taatgatagcaacattttttttaacattctctctaacattcatttttttattgatttaaattagtgtaggtctacactttgaaaattaaattcacacaaa 4319832  T
Q  177 gtggtgggacatgcat 192  Q
    ||| || |||||||||    
T  4319833 gtgatgagacatgcat 4319848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 105 - 188
Target Start/End: Original strand, 17741555 - 17741638
Alignment:
Q  105 ctctctaatactcactctcttattggtttaaattattgtgggtctacactttgaaaattgaacctacacaaagtggtgggacat 188  Q
    |||||||||||||| |   |||||||||||||  ||| | |||||||||||||||||||||||   |||||| |||||||||||    
T  17741555 ctctctaatactcatttctttattggtttaaaccattataggtctacactttgaaaattgaactctcacaaaatggtgggacat 17741638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 106 - 188
Target Start/End: Complemental strand, 31301265 - 31301184
Alignment:
Q  106 tctctaatactcactctcttattggtttaaattattgtgggtctacactttgaaaattgaacctacacaaagtggtgggacat 188  Q
    |||| |||| ||| |||||||||||||||||||||| | | ||||||| |||||||| ||||  |||||||||||||| ||||    
T  31301265 tctcaaatattcattctcttattggtttaaattattat-gatctacacattgaaaatagaactcacacaaagtggtggaacat 31301184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 79 - 125
Target Start/End: Complemental strand, 44742379 - 44742333
Alignment:
Q  79 atgctagcaacactcttttgaacaccctctctaatactcactctctt 125  Q
    ||||||||||||||||||||||  |||||||||||| ||||||||||    
T  44742379 atgctagcaacactcttttgaatgccctctctaatagtcactctctt 44742333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 132 - 185
Target Start/End: Complemental strand, 9192126 - 9192073
Alignment:
Q  132 ttaaattattgtgggtctacactttgaaaattgaacctacacaaagtggtggga 185  Q
    |||||| |||||| ||||||| ||| ||||||||||| ||||||||||||||||    
T  9192126 ttaaatcattgtgagtctacaatttaaaaattgaacccacacaaagtggtggga 9192073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 93 - 188
Target Start/End: Complemental strand, 6387726 - 6387630
Alignment:
Q  93 cttttgaacaccctctctaatactcactctcttattggtttaaattattgtgggtc-tacactttgaaaattgaacctacacaaagtggtgggacat 188  Q
    |||||| |||| |||||||| ||||| ||||||||||| |||||  | |||||||| || |||||| |||| ||||| ||| ||| |||||||||||    
T  6387726 cttttggacactctctctaacactcattctcttattgggttaaaacaatgtgggtcgtatactttggaaatggaacccacataaaatggtgggacat 6387630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 91 - 188
Target Start/End: Complemental strand, 23685293 - 23685200
Alignment:
Q  91 ctcttttgaacaccctctctaatactcactctcttattggtttaaattattgtgggtctacactttgaaaattgaacctacacaaagtggtgggacat 188  Q
    ||||||||||||| |||||||||||| |||    ||||||||||||| |||| |  ||||||||||| |||| ||||   || |||||||||||||||    
T  23685293 ctcttttgaacactctctctaatactaact----tattggtttaaatcattgcgaatctacactttggaaatagaactcgcataaagtggtgggacat 23685200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 92 - 143
Target Start/End: Complemental strand, 5727397 - 5727346
Alignment:
Q  92 tcttttgaacaccctctctaatactcactctcttattggtttaaattattgt 143  Q
    |||||| ||||||||||||| |||||||| | |||||||||||||| |||||    
T  5727397 tcttttaaacaccctctctagtactcacttttttattggtttaaatcattgt 5727346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 121 - 188
Target Start/End: Complemental strand, 35797531 - 35797464
Alignment:
Q  121 ctcttattggtttaaattattgtgggtctacactttgaaaattgaacctacacaaagtggtgggacat 188  Q
    ||||||||| ||||||| ||||||| | |||||||| ||||||||||   ||||||||||||| ||||    
T  35797531 ctcttattgatttaaatcattgtggatttacactttaaaaattgaactcgcacaaagtggtggaacat 35797464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 99 - 192
Target Start/End: Complemental strand, 9453621 - 9453527
Alignment:
Q  99 aacaccctctctaatactcactctcttattggtttaaattattgtgggtc-tacactttgaaaattgaacctacacaaagtggtgggacatgcat 192  Q
    ||||| |||| ||||||||||||||| ||||| ||||||   |||||||| |||| ||||||||  ||||| ||  |||||| ||||||||||||    
T  9453621 aacactctctttaatactcactctctaattgggttaaatctatgtgggtcatacattttgaaaagggaacccacgtaaagtgatgggacatgcat 9453527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 91 - 181
Target Start/End: Original strand, 26637556 - 26637645
Alignment:
Q  91 ctcttttgaacaccctctctaatactcactctcttattggtttaaattattgtgggtctacactttgaaaattgaacctacacaaagtggt 181  Q
    |||||||||||| ||||||||||| | | | | |||||| ||||||||||||||  |||||| ||||| ||| |||| |||||||| ||||    
T  26637556 ctcttttgaacatcctctctaatatttatttt-ttattgatttaaattattgtgaatctacattttgagaatcgaacttacacaaaatggt 26637645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 94 - 188
Target Start/End: Complemental strand, 34952606 - 34952512
Alignment:
Q  94 ttttgaacaccctctctaatactcactctcttattggtttaaattattgtgggtctacactttgaaaattgaacctacacaaagtggtgggacat 188  Q
    |||||||||| |||||||||||| | | |  | ||||||||||| |||| |||||||||  ||||||||||||    |||||| |||||||||||    
T  34952606 ttttgaacactctctctaatacttatttttctcttggtttaaatcattgcgggtctacatattgaaaattgaaatcccacaaaatggtgggacat 34952512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 139 - 188
Target Start/End: Complemental strand, 17716969 - 17716920
Alignment:
Q  139 attgtgggtctacactttgaaaattgaacctacacaaagtggtgggacat 188  Q
    ||||||||||||||||||||||||| |||| ||| ||| | |||||||||    
T  17716969 attgtgggtctacactttgaaaattaaacccacataaaatagtgggacat 17716920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 79 - 136
Target Start/End: Complemental strand, 8671129 - 8671070
Alignment:
Q  79 atgctagcaaca--ctcttttgaacaccctctctaatactcactctcttattggtttaaa 136  Q
    ||||||||||||  ||||||||||| | |||||||||||||||| | ||||| |||||||    
T  8671129 atgctagcaacattctcttttgaacgctctctctaatactcactattttattagtttaaa 8671070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 99 - 147
Target Start/End: Original strand, 28700577 - 28700625
Alignment:
Q  99 aacaccctctctaatactcactctcttattggtttaaattattgtgggt 147  Q
    ||||| |||||||| ||||||||||||||||| |||||||  |||||||    
T  28700577 aacactctctctaacactcactctcttattgggttaaatttatgtgggt 28700625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 89; Significance: 4e-43; HSPs: 24)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 89; E-Value: 4e-43
Query Start/End: Original strand, 79 - 188
Target Start/End: Complemental strand, 34905516 - 34905405
Alignment:
Q  79 atgctagcaacactct--tttgaacaccctctctaatactcactctcttattggtttaaattattgtgggtctacactttgaaaattgaacctacacaaa 176  Q
    ||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| | |||||    
T  34905516 atgctagcaacactctcttttgaacaccctctctaatactcactctcttattggtttaaatcattgtgggtctacactttgaaaattgaacccaaacaaa 34905417  T
Q  177 gtggtgggacat 188  Q
    ||||||||||||    
T  34905416 gtggtgggacat 34905405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 76; E-Value: 2e-35
Query Start/End: Original strand, 77 - 188
Target Start/End: Original strand, 12780759 - 12780870
Alignment:
Q  77 taatgctagcaacactcttttgaacaccctctctaatactcactctcttattggtttaaattattgtgggtctacactttgaaaattgaacctacacaaa 176  Q
    |||||||||||| ||||||||||||||||||||||||| ||| || ||||||||||||||| ||||||| |||||||||||||||||||||| |||||||    
T  12780759 taatgctagcaatactcttttgaacaccctctctaatattcattcccttattggtttaaatcattgtggatctacactttgaaaattgaaccaacacaaa 12780858  T
Q  177 gtggtgggacat 188  Q
    || ||| |||||    
T  12780859 gtagtgagacat 12780870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 81 - 188
Target Start/End: Original strand, 16851975 - 16852084
Alignment:
Q  81 gctagcaacactct--tttgaacaccctctctaatactcactctcttattggtttaaattattgtgggtctacactttgaaaattgaacctacacaaagt 178  Q
    ||||||||||||||  |||||||| |||| ||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||   |||||||    
T  16851975 gctagcaacactctcttttgaacatcctccctaatacccactctcttattggtttaaatcattgtgggtctacactttgaaaattgaacccctacaaagt 16852074  T
Q  179 ggtgggacat 188  Q
    ||||||||||    
T  16852075 ggtgggacat 16852084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 77 - 188
Target Start/End: Complemental strand, 5106480 - 5106367
Alignment:
Q  77 taatgctagcaacac--tcttttgaacaccctctctaatactcactctcttattggtttaaattattgtgggtctacactttgaaaattgaacctacaca 174  Q
    |||||||| ||||||  |||||||||||| |||||||||| ||||||| ||||||||||||||  |||||||| ||||||||||||||||| || |||||    
T  5106480 taatgctaacaacaccctcttttgaacacactctctaatattcactctattattggtttaaatccttgtgggtgtacactttgaaaattgatcccacaca 5106381  T
Q  175 aagtggtgggacat 188  Q
    ||||||||||||||    
T  5106380 aagtggtgggacat 5106367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 105 - 185
Target Start/End: Original strand, 16187460 - 16187540
Alignment:
Q  105 ctctctaatactcactctcttattggtttaaattattgtgggtctacactttgaaaattgaacctacacaaagtggtggga 185  Q
    ||||||||||||||||| ||||||||||||||| ||||| ||||||||||||||||||||||| |||||||| ||||||||    
T  16187460 ctctctaatactcactcgcttattggtttaaataattgtaggtctacactttgaaaattgaacttacacaaaatggtggga 16187540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 105 - 185
Target Start/End: Original strand, 16187678 - 16187758
Alignment:
Q  105 ctctctaatactcactctcttattggtttaaattattgtgggtctacactttgaaaattgaacctacacaaagtggtggga 185  Q
    ||||||||||||||||| ||||||||||||||| ||||| ||||||||||||||||||||||| |||||||| ||||||||    
T  16187678 ctctctaatactcactcgcttattggtttaaataattgtaggtctacactttgaaaattgaacttacacaaaatggtggga 16187758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 77 - 188
Target Start/End: Complemental strand, 1392809 - 1392697
Alignment:
Q  77 taatgctagcaacactct--tttgaacaccctctctaatactcactctcttattggtttaaattattgtgggtctacactttgaaaattgaacctacaca 174  Q
    ||||||||||||||||||  |||||||||||| |||||||||||||||||||||||||||||| |||||||| ||||| ||| ||||||||||  | |||    
T  1392809 taatgctagcaacactctcttttgaacaccctatctaatactcactctcttattggtttaaatcattgtggg-ctacattttaaaaattgaacacataca 1392711  T
Q  175 aagtggtgggacat 188  Q
    |||| ||| |||||    
T  1392710 aagtagtgagacat 1392697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 99 - 188
Target Start/End: Complemental strand, 445976 - 445887
Alignment:
Q  99 aacaccctctctaatactcactctcttattggtttaaattattgtgggtctacactttgaaaattgaacctacacaaagtggtgggacat 188  Q
    ||||| |||||||||||||| |||||||||||||||||| ||||||  |||| ||||||||||||||||| ||||||||||||| |||||    
T  445976 aacactctctctaatactcattctcttattggtttaaatcattgtgactctagactttgaaaattgaacccacacaaagtggtgtgacat 445887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 99 - 188
Target Start/End: Complemental strand, 2676053 - 2675964
Alignment:
Q  99 aacaccctctctaatactcactctcttattggtttaaattattgtgggtctacactttgaaaattgaacctacacaaagtggtgggacat 188  Q
    ||||| |||||||||||||||| | |||||||||||||  |||||||||||||| |||||||||| |||||| |||||||||||||||||    
T  2676053 aacactctctctaatactcacttttttattggtttaaaccattgtgggtctacattttgaaaattaaacctaaacaaagtggtgggacat 2675964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 91 - 188
Target Start/End: Original strand, 10133172 - 10133269
Alignment:
Q  91 ctcttttgaacaccctctctaatactcactctcttattggtttaaattattgtgggtctacactttgaaaattgaacctacacaaagtggtgggacat 188  Q
    |||||||||| || | || ||||||||||||| |||||||||||||| ||||||| ||||||||||||||||||||||  || |||||||||||||||    
T  10133172 ctcttttgaatactcactttaatactcactcttttattggtttaaatcattgtggttctacactttgaaaattgaacccccataaagtggtgggacat 10133269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 91 - 192
Target Start/End: Original strand, 32112731 - 32112832
Alignment:
Q  91 ctcttttgaacaccctctctaatactcactctcttattggtttaaattattgtgggtctacactttgaaaattgaacctacacaaagtggtgggacatgc 190  Q
    ||||||||||||  |||||||||| |||||||||||||| ||||||| ||||||| ||||||||||||||||  |||| ||||||| ||||| |||||||    
T  32112731 ctcttttgaacattctctctaatattcactctcttattgttttaaatcattgtggatctacactttgaaaataaaacccacacaaaatggtgtgacatgc 32112830  T
Q  191 at 192  Q
    ||    
T  32112831 at 32112832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 77 - 176
Target Start/End: Original strand, 17144671 - 17144770
Alignment:
Q  77 taatgctagcaacactcttttgaacaccctctctaatactcactctcttattggtttaaattattgtgggtctacactttgaaaattgaacctacacaaa 176  Q
    |||||||| |||||||||||| | ||| |||| ||||||| ||||  ||||| |||||||| ||||||||||||||||||||||||| ||||||||||||    
T  17144671 taatgctaacaacactcttttaaccactctctttaatacttactcctttattagtttaaatcattgtgggtctacactttgaaaatttaacctacacaaa 17144770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 91 - 193
Target Start/End: Original strand, 12753774 - 12753876
Alignment:
Q  91 ctcttttgaacaccctctctaatactcactctcttattggtttaaattattgtgggtctacactttgaaaattgaacctacacaaagtggtgggacatgc 190  Q
    ||||||| ||||| ||||||||||||| |||| ||||| |||||||| |||||| || |||||  ||||||| ||||| |||||||||||||||||||||    
T  12753774 ctcttttcaacactctctctaatactcgctcttttattagtttaaatcattgtgagtgtacaccctgaaaatagaacccacacaaagtggtgggacatgc 12753873  T
Q  191 atg 193  Q
    |||    
T  12753874 atg 12753876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 94 - 167
Target Start/End: Original strand, 8441866 - 8441939
Alignment:
Q  94 ttttgaacaccctctctaatactcactctcttattggtttaaattattgtgggtctacactttgaaaattgaac 167  Q
    |||||||||| |||||||||||||||||| ||||||||||| |||||||  |||||||||||||||||||||||    
T  8441866 ttttgaacactctctctaatactcactcttttattggtttagattattgaaggtctacactttgaaaattgaac 8441939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 94 - 167
Target Start/End: Original strand, 8450670 - 8450743
Alignment:
Q  94 ttttgaacaccctctctaatactcactctcttattggtttaaattattgtgggtctacactttgaaaattgaac 167  Q
    |||||||||| |||||||||||||||||| ||||||||||| |||||||  |||||||||||||||||||||||    
T  8450670 ttttgaacactctctctaatactcactcttttattggtttagattattgaaggtctacactttgaaaattgaac 8450743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 99 - 188
Target Start/End: Original strand, 31116146 - 31116235
Alignment:
Q  99 aacaccctctctaatactcactctcttattggtttaaattattgtgggtctacactttgaaaattgaacctacacaaagtggtgggacat 188  Q
    ||||| ||||||||||||||||||||||||||||||||| ||||||||| ||||| ||| |||| ||||  ||||||||| |||||||||    
T  31116146 aacactctctctaatactcactctcttattggtttaaatcattgtgggtttacacattggaaatagaacacacacaaagtagtgggacat 31116235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 91 - 185
Target Start/End: Complemental strand, 21987458 - 21987364
Alignment:
Q  91 ctcttttgaacaccctctctaatactcactctcttattggtttaaattattgtgggtctacactttgaaaattgaacctacacaaagtggtggga 185  Q
    ||||||||||||| |||||||||||||||| |||||||||||||||| |||| || ||||||||||| |||| ||||   || ||||||||||||    
T  21987458 ctcttttgaacactctctctaatactcactttcttattggtttaaatcattgcggatctacactttggaaatagaactcgcataaagtggtggga 21987364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 92 - 167
Target Start/End: Original strand, 12784954 - 12785029
Alignment:
Q  92 tcttttgaacaccctctctaatactcactctcttattggtttaaattattgtgggtctacactttgaaaattgaac 167  Q
    ||||||||| ||||| |||||||  || |||||||||||||||||| ||| ||| |||||||||||||||||||||    
T  12784954 tcttttgaataccctttctaatatccattctcttattggtttaaatcattatggatctacactttgaaaattgaac 12785029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 106 - 188
Target Start/End: Complemental strand, 32122946 - 32122864
Alignment:
Q  106 tctctaatactcactctcttattggtttaaattattgtgggtctacactttgaaaattgaacctacacaaagtggtgggacat 188  Q
    |||||| || ||||| | ||||||| |||||| |||||||||||||||||||||||||||||   |||||| |||||||||||    
T  32122946 tctctattattcacttttttattggcttaaatcattgtgggtctacactttgaaaattgaactcccacaaaatggtgggacat 32122864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 91 - 193
Target Start/End: Original strand, 32598962 - 32599064
Alignment:
Q  91 ctcttttgaacaccctctctaatactcactctcttattggtttaaattattgtgggtctacactttgaaaattgaacctacacaaagtggtgggacatgc 190  Q
    ||||||| ||||  |||| ||||||||||||| |||||| ||||||| ||||||  ||||||||||| |||| | ||| ||||||||||| ||||||| |    
T  32598962 ctcttttaaacattctctttaatactcactcttttattgatttaaatcattgtgaatctacactttggaaatagcacccacacaaagtggcgggacatac 32599061  T
Q  191 atg 193  Q
    |||    
T  32599062 atg 32599064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 78 - 188
Target Start/End: Original strand, 19090213 - 19090326
Alignment:
Q  78 aatgctagcaaca--ctcttttgaacaccctctctaatactcactctcttattggtttaaattattgt-gggtctacactttgaaaattgaacctacaca 174  Q
    |||||||||||||  ||||||||| ||| |||||||  ||||||||| ||||||||| || | | ||| ||  |||||||||| |||| ||||| ||| |    
T  19090213 aatgctagcaacactctcttttgagcactctctctagcactcactcttttattggttgaattcaatgtaggacctacactttggaaatggaacccacata 19090312  T
Q  175 aagtggtgggacat 188  Q
    ||||||||||||||    
T  19090313 aagtggtgggacat 19090326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 77 - 184
Target Start/End: Complemental strand, 16436246 - 16436137
Alignment:
Q  77 taatgctagcaacactct--tttgaacaccctctctaatactcactctcttattggtttaaattattgtgggtctacactttgaaaattgaacctacaca 174  Q
    ||||| ||||||||||||  ||| ||||| || | ||||| ||| ||  ||||||||||||||  || ||||||||||||||  |||| ||||| |||||    
T  16436246 taatgttagcaacactctcttttaaacactctttttaatattcagtcgattattggtttaaatctttttgggtctacactttagaaatagaacccacaca 16436147  T
Q  175 aagtggtggg 184  Q
    || |||||||    
T  16436146 aaatggtggg 16436137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 131 - 188
Target Start/End: Complemental strand, 31444085 - 31444028
Alignment:
Q  131 tttaaattattgtgggtctacactttgaaaattgaacctacacaaagtggtgggacat 188  Q
    |||||||  ||||| ||| ||||||||||||||||||| ||||||| |||||| ||||    
T  31444085 tttaaatccttgtgagtcaacactttgaaaattgaaccgacacaaaatggtggaacat 31444028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 148 - 188
Target Start/End: Original strand, 35128794 - 35128834
Alignment:
Q  148 ctacactttgaaaattgaacctacacaaagtggtgggacat 188  Q
    ||||||||||||||| ||||| ||| |||||||||||||||    
T  35128794 ctacactttgaaaatggaacccacataaagtggtgggacat 35128834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 89; Significance: 4e-43; HSPs: 53)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 89; E-Value: 4e-43
Query Start/End: Original strand, 80 - 188
Target Start/End: Original strand, 18427153 - 18427261
Alignment:
Q  80 tgctagcaacactcttttgaacaccctctctaatactcactctcttattggtttaaattattgtgggtctacactttgaaaattgaacctacacaaagtg 179  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||| ||||||| ||    
T  18427153 tgctagcaacactctcttgaacaccctctctaatactcactctcttattggtttaaatcattgtgggtctacactttgaaaatagaacccacacaaaatg 18427252  T
Q  180 gtgggacat 188  Q
    |||||||||    
T  18427253 gtgggacat 18427261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 78 - 188
Target Start/End: Original strand, 41451894 - 41452006
Alignment:
Q  78 aatgctagcaacactct--tttgaacaccctctctaatactcactctcttattggtttaaattattgtgggtctacactttgaaaattgaacctacacaa 175  Q
    |||||||||||||||||  ||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||| ||||||    
T  41451894 aatgctagcaacactctcttttgaacactctctctaatactcactctcttattggtttaaatcattgtgggtctactctttgaaaattgaacccacacaa 41451993  T
Q  176 agtggtgggacat 188  Q
    |||||||||||||    
T  41451994 agtggtgggacat 41452006  T

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Target: chr3; HSP #3
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 71 - 188
Target Start/End: Original strand, 37776695 - 37776814
Alignment:
Q  71 agagactaatgctagcaacactctttt--gaacaccctctctaatactcactctcttattggtttaaattattgtgggtctacactttgaaaattgaacc 168  Q
    ||||| |||||||||||||||||||||  ||||||||||||||||||||||||||||| |||||||||| ||||| ||||||||||||||||||||||||    
T  37776695 agagagtaatgctagcaacactcttttatgaacaccctctctaatactcactctcttagtggtttaaatcattgtaggtctacactttgaaaattgaacc 37776794  T
Q  169 tacacaaagtggtgggacat 188  Q
     |||||||||||| ||||||    
T  37776795 cacacaaagtggtaggacat 37776814  T

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Target: chr3; HSP #4
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 78 - 188
Target Start/End: Complemental strand, 24734886 - 24734774
Alignment:
Q  78 aatgctagcaacactct--tttgaacaccctctctaatactcactctcttattggtttaaattattgtgggtctacactttgaaaattgaacctacacaa 175  Q
    |||||||||||||||||  ||||||||| ||||||||||||||||||||||||||||||||| |||||||| |||| |||||||||||||||| ||||||    
T  24734886 aatgctagcaacactctcttttgaacactctctctaatactcactctcttattggtttaaatcattgtgggcctactctttgaaaattgaacccacacaa 24734787  T
Q  176 agtggtgggacat 188  Q
    |||||||||||||    
T  24734786 agtggtgggacat 24734774  T

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Target: chr3; HSP #5
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 91 - 188
Target Start/End: Complemental strand, 28529417 - 28529322
Alignment:
Q  91 ctcttttgaacaccctctctaatactcactctcttattggtttaaattattgtgggtctacactttgaaaattgaacctacacaaagtggtgggacat 188  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||  |||| |||||||||||||    
T  28529417 ctcttttgaacaccctctctaatactcactctcttattggtttaaatcattgtgggtctacactttgaaaattgaacc--cacacagtggtgggacat 28529322  T

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Target: chr3; HSP #6
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 77 - 188
Target Start/End: Original strand, 52123954 - 52124067
Alignment:
Q  77 taatgctagcaacactct--tttgaacaccctctctaatactcactctcttattggtttaaattattgtgggtctacactttgaaaattgaacctacaca 174  Q
    ||||||||||||||||||  ||||||||| |||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||  ||||    
T  52123954 taatgctagcaacactctcttttgaacactctctctaatactcactttcttattggtttaaatcattgtgggtctacactttgaaaattgaacccccaca 52124053  T
Q  175 aagtggtgggacat 188  Q
    || | |||||||||    
T  52124054 aaatagtgggacat 52124067  T

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Target: chr3; HSP #7
Raw Score: 70; E-Value: 9e-32
Query Start/End: Original strand, 91 - 188
Target Start/End: Original strand, 20493459 - 20493556
Alignment:
Q  91 ctcttttgaacaccctctctaatactcactctcttattggtttaaattattgtgggtctacactttgaaaattgaacctacacaaagtggtgggacat 188  Q
    ||||||||||||| ||||||| ||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||  ||||||||||| ||||||    
T  20493459 ctcttttgaacactctctctattactcactctcttattggtttaaatcattgtgggtctacactttgaatattgaacccccacaaagtggtaggacat 20493556  T

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Target: chr3; HSP #8
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 80 - 188
Target Start/End: Complemental strand, 46450244 - 46450134
Alignment:
Q  80 tgctagcaacactct-tttgaacaccctctctaatactcactctcttattggtttaaattattgtgggtctacactttgaaaattgaacctacac-aaag 177  Q
    |||||||||| |||| ||| ||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||| ||||| |||| ||||    
T  46450244 tgctagcaacgctctattttaacactctctctaatactcactctcttattggtttaaatcattgtgggtctacactttgcaaatagaacccacacaaaag 46450145  T
Q  178 tggtgggacat 188  Q
    |||||||||||    
T  46450144 tggtgggacat 46450134  T

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Target: chr3; HSP #9
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 94 - 188
Target Start/End: Original strand, 8824996 - 8825090
Alignment:
Q  94 ttttgaacaccctctctaatactcactctcttattggtttaaattattgtgggtctacactttgaaaattgaacctacacaaagtggtgggacat 188  Q
    |||||||||| |||| ||||||||||||||||||||||||||||||||||| || || |||||||||||||||||  || ||| |||||||||||    
T  8824996 ttttgaacactctctttaatactcactctcttattggtttaaattattgtgagtgtagactttgaaaattgaacccgcataaaatggtgggacat 8825090  T

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Target: chr3; HSP #10
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 78 - 188
Target Start/End: Complemental strand, 38414826 - 38414716
Alignment:
Q  78 aatgctagcaacactcttttgaacaccctctctaatactcactctcttattggtttaaattattgtgggtctacactttgaaaattgaacctacacaaag 177  Q
    ||||||| || ||||||||||| ||  |||| ||| ||||||||||||||||||||||||||| |||| |||||||||| |||||| |||| |||||||     
T  38414826 aatgctaacagcactcttttgagcattctctttaacactcactctcttattggtttaaattatcgtggatctacactttaaaaattaaacccacacaaaa 38414727  T
Q  178 tggtgggacat 188  Q
    |||||||||||    
T  38414726 tggtgggacat 38414716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 91 - 189
Target Start/End: Complemental strand, 46161113 - 46161015
Alignment:
Q  91 ctcttttgaacaccctctctaatactcactctcttattggtttaaattattgtgggtctacactttgaaaattgaacctacacaaagtggtgggacatg 189  Q
    |||| ||| |||| ||||||||||||||||||||||||||||||||| ||| ||| ||||||||||| |||| ||||| |||||||||||| |||||||    
T  46161113 ctctcttggacactctctctaatactcactctcttattggtttaaatcattatggatctacactttggaaatagaaccaacacaaagtggtcggacatg 46161015  T

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Target: chr3; HSP #12
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 80 - 192
Target Start/End: Complemental strand, 27243225 - 27243110
Alignment:
Q  80 tgctagcaacactct--tttgaacaccctctctaatactcactctcttattggtttaaattattgtgggtc-tacactttgaaaattgaacctacacaaa 176  Q
    |||||||||||||||  ||||||||| || ||||||||||||||||| ||||| |||||| | |||||||| ||||||||| |||| ||||| ||| |||    
T  27243225 tgctagcaacactctcttttgaacactctttctaatactcactctctcattgggttaaatcaatgtgggtcatacactttggaaatggaacccacataaa 27243126  T
Q  177 gtggtgggacatgcat 192  Q
    ||||||||||||||||    
T  27243125 gtggtgggacatgcat 27243110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 91 - 167
Target Start/End: Original strand, 29588747 - 29588823
Alignment:
Q  91 ctcttttgaacaccctctctaatactcactctcttattggtttaaattattgtgggtctacactttgaaaattgaac 167  Q
    ||||||||||||| |||| ||| |||||||||||||||| ||||||| |||||||||||||||||||||||||||||    
T  29588747 ctcttttgaacactctctataacactcactctcttattgatttaaatcattgtgggtctacactttgaaaattgaac 29588823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 92 - 168
Target Start/End: Original strand, 50156675 - 50156751
Alignment:
Q  92 tcttttgaacaccctctctaatactcactctcttattggtttaaattattgtgggtctacactttgaaaattgaacc 168  Q
    |||||||||||| || | |||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||    
T  50156675 tcttttgaacactctttgtaatactcactctcttattggtttaaatcattgtgggtctacacttttaaaattgaacc 50156751  T

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Target: chr3; HSP #15
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 99 - 193
Target Start/End: Original strand, 55452037 - 55452131
Alignment:
Q  99 aacaccctctctaatactcactctcttattggtttaaattattgtgggtctacactttgaaaattgaacctacacaaagtggtgggacatgcatg 193  Q
    ||||| |||||||||||||||||| | |||||||||||| ||| || |||||||||||| |||| ||||| ||||||||||||||||||| ||||    
T  55452037 aacactctctctaatactcactctttcattggtttaaatcattatgagtctacactttggaaatagaacccacacaaagtggtgggacatacatg 55452131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 91 - 188
Target Start/End: Complemental strand, 20791462 - 20791365
Alignment:
Q  91 ctcttttgaacaccctctctaatactcactctcttattggtttaaattattgtgggtctacactttgaaaattgaacctacacaaagtggtgggacat 188  Q
    ||||||||||||| |||||||||||||||| |||||||||||||||| |||| || ||||||||||| |||| ||||   || |||||||||||||||    
T  20791462 ctcttttgaacactctctctaatactcactttcttattggtttaaatcattgcggatctacactttggaaatagaactcgcataaagtggtgggacat 20791365  T

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Target: chr3; HSP #17
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 77 - 185
Target Start/End: Original strand, 5452060 - 5452168
Alignment:
Q  77 taatgctagcaacactct--tttgaacaccctctctaatactcactctcttattggtttaaattattgtgggtctacactttgaaaattgaacctacaca 174  Q
    ||||||||||||||||||  ||||||||| ||||| ||||||| ||||||||||| |||||||  |  ||||||||||||| |||||||||| | |||||    
T  5452060 taatgctagcaacactctcttttgaacactctctccaatactcgctctcttattgatttaaatcct--tgggtctacacttagaaaattgaatccacaca 5452157  T
Q  175 aagtggtggga 185  Q
    |||||||||||    
T  5452158 aagtggtggga 5452168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 105 - 188
Target Start/End: Original strand, 10948588 - 10948671
Alignment:
Q  105 ctctctaatactcactctcttattggtttaaattattgtgggtctacactttgaaaattgaacctacacaaagtggtgggacat 188  Q
    |||| ||||||||||||| |||||||||||||| ||||||||| |||||||| ||||||||||  |||||||||||||| ||||    
T  10948588 ctctttaatactcactcttttattggtttaaatcattgtgggtttacactttaaaaattgaacaaacacaaagtggtggaacat 10948671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 80 - 188
Target Start/End: Complemental strand, 14236198 - 14236088
Alignment:
Q  80 tgctagcaacactct--tttgaacaccctctctaatactcactctcttattggtttaaattattgtgggtctacactttgaaaattgaacctacacaaag 177  Q
    |||||||||||||||  ||||||||| || ||||||||||||| | |||||||| ||||||||||||| ||||||||||| |||| ||||   || ||||    
T  14236198 tgctagcaacactctgttttgaacactctttctaatactcacttttttattggtctaaattattgtggatctacactttggaaatagaactcgcataaag 14236099  T
Q  178 tggtgggacat 188  Q
    |||||||||||    
T  14236098 tggtgggacat 14236088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 91 - 178
Target Start/End: Complemental strand, 29755666 - 29755579
Alignment:
Q  91 ctcttttgaacaccctctctaatactcactctcttattggtttaaattattgtgggtctacactttgaaaattgaacctacacaaagt 178  Q
    ||||||||||||| | |||||||||  || ||||||||||||||||| ||||| | |||||||||||||||||||||| |||||||||    
T  29755666 ctcttttgaacactccctctaatacctaccctcttattggtttaaatcattgttgatctacactttgaaaattgaacccacacaaagt 29755579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 110 - 188
Target Start/End: Complemental strand, 752539 - 752461
Alignment:
Q  110 taatactcactctcttattggtttaaattattgtgggtctacactttgaaaattgaacctacacaaagtggtgggacat 188  Q
    ||||||||| ||||||||| |||||||| ||||||||||||||||||  |||| ||||| |||||||||||||||||||    
T  752539 taatactcattctcttattagtttaaatcattgtgggtctacactttagaaatagaacccacacaaagtggtgggacat 752461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 80 - 188
Target Start/End: Complemental strand, 46576126 - 46576017
Alignment:
Q  80 tgctagcaacactcttttgaacaccctctctaatactcactctcttattggtttaaattattgtgggtc-tacactttgaaaattgaacctacacaaagt 178  Q
    |||||||||||||||||| ||||| |||| ||||||||||||||| || || |||||| | |||||| | |||| ||||||||| ||||| ||| |||||    
T  46576126 tgctagcaacactcttttcaacactctctttaatactcactctctaatagggttaaatcaatgtggggcgtacattttgaaaatggaacccacaaaaagt 46576027  T
Q  179 ggtgggacat 188  Q
    ||||||||||    
T  46576026 ggtgggacat 46576017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 110 - 188
Target Start/End: Complemental strand, 742103 - 742025
Alignment:
Q  110 taatactcactctcttattggtttaaattattgtgggtctacactttgaaaattgaacctacacaaagtggtgggacat 188  Q
    ||||||||| ||||||||| |||||||| ||||||||||||||||||  |||| ||| | |||||||||||||||||||    
T  742103 taatactcattctcttattagtttaaatcattgtgggtctacactttagaaatagaatccacacaaagtggtgggacat 742025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 94 - 192
Target Start/End: Original strand, 2419481 - 2419579
Alignment:
Q  94 ttttgaacaccctctctaatactcactctcttattggtttaaattattgtgggtctacactttgaaaattgaacctacacaaagtggtgggacatgcat 192  Q
    ||||||||||  ||| ||||||||||| |||||||||||||||| ||||||||||||||| ||| |||| ||||  |  ||||||||| ||||||||||    
T  2419481 ttttgaacactttctttaatactcactttcttattggtttaaatcattgtgggtctacacattggaaatagaactcatgcaaagtggtaggacatgcat 2419579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 94 - 168
Target Start/End: Original strand, 29388611 - 29388685
Alignment:
Q  94 ttttgaacaccctctctaatactcactctcttattggtttaaattattgtgggtctacactttgaaaattgaacc 168  Q
    |||||||||| |||||||| || |||||||||||||  |||||| |||||| |||||||||||||||||||||||    
T  29388611 ttttgaacactctctctaacacccactctcttattgacttaaatcattgtgagtctacactttgaaaattgaacc 29388685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 78 - 179
Target Start/End: Original strand, 41707440 - 41707541
Alignment:
Q  78 aatgctagcaacactc-ttttgaacaccctctctaatactcactctcttattggtttaaattattgtgggtctacactttgaaaattgaacctacacaaa 176  Q
    |||||||||||||||  |||||||||| |||| ||| ||| | | |||||| |||||||||||||||||||||| ||||| ||||||||||| |||||||    
T  41707440 aatgctagcaacacttattttgaacactctctttaacacttattttcttat-ggtttaaattattgtgggtctatactttaaaaattgaacccacacaaa 41707538  T
Q  177 gtg 179  Q
    |||    
T  41707539 gtg 41707541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 91 - 188
Target Start/End: Complemental strand, 48351602 - 48351505
Alignment:
Q  91 ctcttttgaacaccctctctaatactcactctcttattggtttaaattattgtgggtctacactttgaaaattgaacctacacaaagtggtgggacat 188  Q
    ||||||||||||   ||||||||||||  |||||||||| ||||||| ||| ||| | |||||||||||||||||||| ||||||||| ||| |||||    
T  48351602 ctcttttgaacattttctctaatactctttctcttattgatttaaatcattatggatatacactttgaaaattgaacccacacaaagtagtgagacat 48351505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 91 - 183
Target Start/End: Complemental strand, 2009160 - 2009068
Alignment:
Q  91 ctcttttgaacaccctctctaatactcactctcttattggtttaaattattgtgggtctacactttgaaaattgaacctacacaaagtggtgg 183  Q
    ||||||| |||| ||||||||||| ||| | | |||||| |||||||||||||| ||||||||||| |||| |||| ||||| ||||||||||    
T  2009160 ctcttttaaacatcctctctaatattcatttttttattgatttaaattattgtgagtctacactttaaaaactgaaactacataaagtggtgg 2009068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 79 - 164
Target Start/End: Original strand, 15790370 - 15790456
Alignment:
Q  79 atgctagcaacactctttt--gaacaccctctctaatactcactctcttattggtttaaattattgtgggtctacactttgaaaattg 164  Q
    |||||||||||||||||||  ||| |  ||||||||||||||||||||||||||||||||| ||| | || |||||||||||||||||    
T  15790370 atgctagcaacactcttttttgaataatctctctaatactcactctcttattggtttaaatcattat-ggcctacactttgaaaattg 15790456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 109 - 188
Target Start/End: Original strand, 19345032 - 19345111
Alignment:
Q  109 ctaatactcactctcttattggtttaaattattgtgggtctacactttgaaaattgaacctacacaaagtggtgggacat 188  Q
    |||||||| | ||| |||||||||||||| |||||| ||||||| |||||||||||||||   |||||||||||||||||    
T  19345032 ctaatacttattcttttattggtttaaatcattgtgagtctacaatttgaaaattgaaccccaacaaagtggtgggacat 19345111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 105 - 168
Target Start/End: Original strand, 24429053 - 24429116
Alignment:
Q  105 ctctctaatactcactctcttattggtttaaattattgtgggtctacactttgaaaattgaacc 168  Q
    |||||||||||||||| | |||||||||||||| ||||||| |||||||||| |||||||||||    
T  24429053 ctctctaatactcactattttattggtttaaatcattgtggatctacactttaaaaattgaacc 24429116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 110 - 185
Target Start/End: Original strand, 38138615 - 38138690
Alignment:
Q  110 taatactcactctcttattggtttaaattattgtgggtctacactttgaaaattgaacctacacaaagtggtggga 185  Q
    ||||||| |||||||||||||||||||| ||||||| |||| |||||||| || ||| ||||||||| ||||||||    
T  38138615 taatacttactctcttattggtttaaatcattgtggatctatactttgaagatagaaactacacaaaatggtggga 38138690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 126 - 188
Target Start/End: Original strand, 26310495 - 26310557
Alignment:
Q  126 attggtttaaattattgtgggtctacactttgaaaattgaacctacacaaagtggtgggacat 188  Q
    |||||||||||| ||| |||||||||||||||||||||||||| ||| ||| |||||||||||    
T  26310495 attggtttaaatcattatgggtctacactttgaaaattgaaccaacaaaaaatggtgggacat 26310557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 77 - 188
Target Start/End: Complemental strand, 43016595 - 43016482
Alignment:
Q  77 taatgctagcaacactct--tttgaacaccctctctaatactcactctcttattggtttaaattattgtgggtctacactttgaaaattgaacctacaca 174  Q
    ||||||||| ||||||||  ||||||||||| || |||||||||||||||||||| ||||||| ||| ||  |||| ||||| ||||||||||  |||||    
T  43016595 taatgctagaaacactctattttgaacacccactgtaatactcactctcttattgatttaaatcattatgaatctatactttaaaaattgaactaacaca 43016496  T
Q  175 aagtggtgggacat 188  Q
     ||| ||| |||||    
T  43016495 gagtagtgcgacat 43016482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 107 - 188
Target Start/End: Complemental strand, 22604710 - 22604629
Alignment:
Q  107 ctctaatactcactctcttattggtttaaattattgtgggtctacactttgaaaattgaacctacacaaagtggtgggacat 188  Q
    ||||||| |||||||||||||  |||||||| |||||| ||||||| ||||||||||||||   |||||| |||||||||||    
T  22604710 ctctaattctcactctcttataagtttaaatcattgtgagtctacattttgaaaattgaactcccacaaaatggtgggacat 22604629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 99 - 176
Target Start/End: Complemental strand, 41387719 - 41387642
Alignment:
Q  99 aacaccctctctaatactcactctcttattggtttaaattattgtgggtctacactttgaaaattgaacctacacaaa 176  Q
    ||||| ||||| |||||||| ||||||||| | |||||| ||||||||||| ||||||||||||| |||| |||||||    
T  41387719 aacactctctccaatactcaatctcttatttgattaaatcattgtgggtctgcactttgaaaattaaacccacacaaa 41387642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 124 - 188
Target Start/End: Complemental strand, 49072138 - 49072074
Alignment:
Q  124 ttattggtttaaattattgtgggtctacactttgaaaattgaacctacacaaagtggtgggacat 188  Q
    |||||||||||||||||||||||||||||||||||||||  |||  | ||||||||||| |||||    
T  49072138 ttattggtttaaattattgtgggtctacactttgaaaatataactcatacaaagtggtgagacat 49072074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 77 - 178
Target Start/End: Original strand, 29718849 - 29718952
Alignment:
Q  77 taatgctagcaaca--ctcttttgaacaccctctctaatactcactctcttattggtttaaattattgt-gggtctacactttgaaaattgaacctacac 173  Q
    ||||||||||| ||  |||||||||||||| | | ||||||| | ||| ||||| |||||||||||||| |||||||||||| |||||||||||| |||     
T  29718849 taatgctagcatcattctcttttgaacaccttatttaatacttattct-ttattagtttaaattattgttgggtctacacttagaaaattgaacccacaa 29718947  T
Q  174 aaagt 178  Q
    |||||    
T  29718948 aaagt 29718952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 105 - 162
Target Start/End: Complemental strand, 37285435 - 37285378
Alignment:
Q  105 ctctctaatactcactctcttattggtttaaattattgtgggtctacactttgaaaat 162  Q
    |||||||||||| ||| | |||||||||||||||||||||||||| |||||| |||||    
T  37285435 ctctctaatacttacttttttattggtttaaattattgtgggtctgcactttaaaaat 37285378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 92 - 167
Target Start/End: Original strand, 45515512 - 45515585
Alignment:
Q  92 tcttttgaacaccctctctaatactcactctcttattggtttaaattattgtgggtctacactttgaaaattgaac 167  Q
    ||||||||| | ||||||||||| ||||||||||||||||| |||| ||  | |||||||||||||||||||||||    
T  45515512 tcttttgaataacctctctaatattcactctcttattggtt-aaatcata-taggtctacactttgaaaattgaac 45515585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 130 - 192
Target Start/End: Complemental strand, 42340958 - 42340896
Alignment:
Q  130 gtttaaattattgtgggtctacactttgaaaattgaacctacacaaagtggtgggacatgcat 192  Q
    |||||||| ||||||||||| ||||||||||||| | || | ||||||||||| |||||||||    
T  42340958 gtttaaatcattgtgggtctgcactttgaaaattaagccaatacaaagtggtgagacatgcat 42340896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 91 - 188
Target Start/End: Complemental strand, 44844148 - 44844050
Alignment:
Q  91 ctcttttgaacaccctctctaatactcactctcttattggtttaaattattgtgggtc-tacactttgaaaattgaacctacacaaagtggtgggacat 188  Q
    |||||||  |||| |||||||| ||||||| | ||||||| |||||| |||||||||| |||||||| ||||||||||  |||  || |||||||||||    
T  44844148 ctctttttgacactctctctaacactcacttttttattggattaaatcattgtgggtcatacactttaaaaattgaactcacatgaaatggtgggacat 44844050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 111 - 188
Target Start/End: Original strand, 20586885 - 20586962
Alignment:
Q  111 aatactcactctcttattggtttaaattattgtgggtctacactttgaaaattgaacctacacaaagtggtgggacat 188  Q
    |||||||||||| |||||||||||||||||||| | | || ||||| |||| | ||| |||| |||||||||| ||||    
T  20586885 aatactcactcttttattggtttaaattattgttgatatatactttaaaaactaaacatacataaagtggtggaacat 20586962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 125 - 163
Target Start/End: Original strand, 22856282 - 22856320
Alignment:
Q  125 tattggtttaaattattgtgggtctacactttgaaaatt 163  Q
    ||||||||||||| ||||||| |||||||||||||||||    
T  22856282 tattggtttaaataattgtggatctacactttgaaaatt 22856320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 79 - 130
Target Start/End: Original strand, 27243047 - 27243100
Alignment:
Q  79 atgctagcaacactct--tttgaacaccctctctaatactcactctcttattgg 130  Q
    ||||||||||||||||  ||||||||| |||||||| ||||||||| |||||||    
T  27243047 atgctagcaacactctcttttgaacactctctctaacactcactcttttattgg 27243100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 105 - 191
Target Start/End: Complemental strand, 36751088 - 36751002
Alignment:
Q  105 ctctctaatactcactctcttattggtttaaattattgtgggtctacactttgaaaattgaacctacacaaagtggtgggacatgca 191  Q
    |||||||| | | ||||||||||| |||| ||| | |||| |||||||||||  ||||  |||||||| |||||||| |||||||||    
T  36751088 ctctctaacatttactctcttattagttttaatcaatgtgagtctacactttagaaatgaaacctacataaagtggtaggacatgca 36751002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 77 - 114
Target Start/End: Complemental strand, 930678 - 930641
Alignment:
Q  77 taatgctagcaacactcttttgaacaccctctctaata 114  Q
    ||||||||||||||||||||||||||| || |||||||    
T  930678 taatgctagcaacactcttttgaacactctttctaata 930641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 91 - 188
Target Start/End: Complemental strand, 39186130 - 39186033
Alignment:
Q  91 ctcttttgaacaccctctctaatactcactctcttattggtttaaattattgtgggtctacactttgaaaattgaacctacacaaagtggtgggacat 188  Q
    |||||||||| || ||||| ||||| | ||||||||||| ||||||| ||||  | ||||||||||| |||| ||||   || ||||||||| |||||    
T  39186130 ctcttttgaatactctctccaataccctctctcttattgatttaaatcattgcagatctacactttggaaatagaactcgcataaagtggtgagacat 39186033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 91 - 175
Target Start/End: Original strand, 49418433 - 49418518
Alignment:
Q  91 ctcttttgaacaccctctctaatactcactctcttattggtttaaa-ttattgtgggtctacactttgaaaattgaacctacacaa 175  Q
    ||||||||||||  ||||||| || |||||||||||||| |||||| ||||| |||||||| || ||| ||||  |||| ||||||    
T  49418433 ctcttttgaacattctctctagtattcactctcttattgatttaaatttattatgggtctaaacgttggaaatataacccacacaa 49418518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 124 - 192
Target Start/End: Original strand, 50661568 - 50661637
Alignment:
Q  124 ttattggtttaaattattgtgggtc-tacactttgaaaattgaacctacacaaagtggtgggacatgcat 192  Q
    ||||||| |||||| | |||||||| |||| |||| |||| ||||| ||| |||||||||||||||||||    
T  50661568 ttattgggttaaatcaatgtgggtcatacattttggaaatggaacccacataaagtggtgggacatgcat 50661637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 80 - 188
Target Start/End: Complemental strand, 13809261 - 13809150
Alignment:
Q  80 tgctagcaacactcttt--tgaacaccctctctaatactcactctcttattggtttaaattattgtgggtc-tacactttgaaaattgaacctacacaaa 176  Q
    |||||||||||||||||  || ||||  ||||||| | ||| ||||||||||| |||||  | |||||||| || |||||| |||| ||||| ||| |||    
T  13809261 tgctagcaacactctttcttggacactttctctaacattcattctcttattgggttaaaacaatgtgggtcatatactttggaaatggaacccacataaa 13809162  T
Q  177 gtggtgggacat 188  Q
     |||||||||||    
T  13809161 atggtgggacat 13809150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 84 - 137
Target Start/End: Complemental strand, 30624794 - 30624739
Alignment:
Q  84 agcaacactctttt--gaacaccctctctaatactcactctcttattggtttaaat 137  Q
    ||||||||||||||  || |||| ||||||| ||| ||||||||||||||||||||    
T  30624794 agcaacactcttttttgagcaccatctctaacacttactctcttattggtttaaat 30624739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 77 - 176
Target Start/End: Complemental strand, 41607589 - 41607492
Alignment:
Q  77 taatgctagcaacactcttttgaacaccctctctaatactcactctcttattggtttaaattattgtgggtctacactttgaaaattgaacctacacaaa 176  Q
    ||||||||||| |||| |||| |||||  ||| ||||| | | ||| |||||| ||||||| | ||||| ||||||||||||||||| |||  |||||||    
T  41607589 taatgctagcagcacttttttaaacac--tctttaataattattcttttattgatttaaataactgtggatctacactttgaaaattaaactcacacaaa 41607492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 86; Significance: 3e-41; HSPs: 37)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 91 - 188
Target Start/End: Original strand, 28490736 - 28490833
Alignment:
Q  91 ctcttttgaacaccctctctaatactcactctcttattggtttaaattattgtgggtctacactttgaaaattgaacctacacaaagtggtgggacat 188  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||    
T  28490736 ctcttttgaacactctctctaatactcactctcttattggtttaaattattgtgggtctacactttcaaaattgaacttacacaaagtggtgggacat 28490833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 76; E-Value: 2e-35
Query Start/End: Original strand, 77 - 188
Target Start/End: Original strand, 41330393 - 41330504
Alignment:
Q  77 taatgctagcaacactcttttgaacaccctctctaatactcactctcttattggtttaaattattgtgggtctacactttgaaaattgaacctacacaaa 176  Q
    ||||||||||||||||||||||||||| |||| |||||||   | |||||||||||||||| |||||| |||||||||||||||||||||||||||||||    
T  41330393 taatgctagcaacactcttttgaacacactctttaatactacatttcttattggtttaaatcattgtgagtctacactttgaaaattgaacctacacaaa 41330492  T
Q  177 gtggtgggacat 188  Q
    ||| ||||||||    
T  41330493 gtgatgggacat 41330504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 77 - 188
Target Start/End: Original strand, 41105568 - 41105681
Alignment:
Q  77 taatgctagcaacactct--tttgaacaccctctctaatactcactctcttattggtttaaattattgtgggtctacactttgaaaattgaacctacaca 174  Q
    |||||| |||||||||||  ||||| ||| ||||||||||||| ||||||||||||||||||| | ||||||| | |||||||||||||||||| |||||    
T  41105568 taatgcgagcaacactctcttttgagcactctctctaatactcgctctcttattggtttaaatcactgtgggtatgcactttgaaaattgaacccacaca 41105667  T
Q  175 aagtggtgggacat 188  Q
    |||| |||||||||    
T  41105668 aagtagtgggacat 41105681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 99 - 188
Target Start/End: Original strand, 10141998 - 10142087
Alignment:
Q  99 aacaccctctctaatactcactctcttattggtttaaattattgtgggtctacactttgaaaattgaacctacacaaagtggtgggacat 188  Q
    ||||| |||||||| |||||||||||||||| ||||||| ||||| |||||||||||||||||| ||||| |||||||||||||||||||    
T  10141998 aacactctctctaacactcactctcttattgatttaaataattgttggtctacactttgaaaatggaaccaacacaaagtggtgggacat 10142087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 78 - 188
Target Start/End: Complemental strand, 34368541 - 34368429
Alignment:
Q  78 aatgctagcaacactct--tttgaacaccctctctaatactcactctcttattggtttaaattattgtgggtctacactttgaaaattgaacctacacaa 175  Q
    |||||||||||||||||  ||||| ||| ||||||   || ||||||||||||||||||||| ||||||||||||||||||||||| |||||| ||||||    
T  34368541 aatgctagcaacactctcttttgagcactctctctgtcacccactctcttattggtttaaatcattgtgggtctacactttgaaaaatgaacccacacaa 34368442  T
Q  176 agtggtgggacat 188  Q
    |||||||| ||||    
T  34368441 agtggtggaacat 34368429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 77 - 188
Target Start/End: Complemental strand, 37455534 - 37455418
Alignment:
Q  77 taatgctagcaacactct--tttgaacaccctc----tctaatactcactctcttattggtttaaattattgtgggtctacactttgaaaattgaaccta 170  Q
    ||||||||||||||||||  |||||||||||||    |||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||      
T  37455534 taatgctagcaacactctcttttgaacaccctccctctctaatactcactctcttattggtttaa-ttattgtgagtctacactttgaaaattgaacccc 37455436  T
Q  171 cacaaagtggtgggacat 188  Q
    |||||| |||||| ||||    
T  37455435 cacaaaatggtggaacat 37455418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 91 - 176
Target Start/End: Original strand, 28223790 - 28223875
Alignment:
Q  91 ctcttttgaacaccctctctaatactcactctcttattggtttaaattattgtgggtctacactttgaaaattgaacctacacaaa 176  Q
    |||||||||||| ||||||||||||||||||| |||||||||||||| ||| |||||||| |||||||||||||| || |||||||    
T  28223790 ctcttttgaacatcctctctaatactcactcttttattggtttaaatcattatgggtctatactttgaaaattgagcccacacaaa 28223875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 115 - 188
Target Start/End: Complemental strand, 39246750 - 39246677
Alignment:
Q  115 ctcactctcttattggtttaaattattgtgggtctacactttgaaaattgaacctacacaaagtggtgggacat 188  Q
    |||||||||||||||||||||| |||||||||||||||||||||||| |||||  |||||||||||||||||||    
T  39246750 ctcactctcttattggtttaaagtattgtgggtctacactttgaaaactgaactcacacaaagtggtgggacat 39246677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 77 - 188
Target Start/End: Original strand, 5413732 - 5413848
Alignment:
Q  77 taatgctagcaacactct--tttgaacaccctctc---taatactcactctcttattggtttaaattattgtgggtctacactttgaaaattgaacctac 171  Q
    |||||| |||||||||||  ||||||||| ||||    ||||||||||| | |||||||||||||| ||| ||||||||||||||| |||||||||| ||    
T  5413732 taatgcaagcaacactctcttttgaacactctctactataatactcacttttttattggtttaaatcattatgggtctacactttgtaaattgaacccac 5413831  T
Q  172 acaaagtggtgggacat 188  Q
    |||||||||||||||||    
T  5413832 acaaagtggtgggacat 5413848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 105 - 188
Target Start/End: Original strand, 28434846 - 28434927
Alignment:
Q  105 ctctctaatactcactctcttattggtttaaattattgtgggtctacactttgaaaattgaacctacacaaagtggtgggacat 188  Q
    |||||||||||||| | |||||||||||||||| |||||||||||| ||||||||||||||||| ||||  |||||||||||||    
T  28434846 ctctctaatactcattttcttattggtttaaatcattgtgggtctaaactttgaaaattgaaccaacac--agtggtgggacat 28434927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 105 - 168
Target Start/End: Complemental strand, 14553664 - 14553601
Alignment:
Q  105 ctctctaatactcactctcttattggtttaaattattgtgggtctacactttgaaaattgaacc 168  Q
    ||||||||||||||||||||| ||||||||| |||||||||||||||||||| |||||||||||    
T  14553664 ctctctaatactcactctcttgttggtttaatttattgtgggtctacactttaaaaattgaacc 14553601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 99 - 188
Target Start/End: Original strand, 25710494 - 25710583
Alignment:
Q  99 aacaccctctctaatactcactctcttattggtttaaattattgtgggtctacactttgaaaattgaacctacacaaagtggtgggacat 188  Q
    ||||| |||| ||||| ||| ||||||||||||||||||||||||||||||||||||||||||| ||||  | || ||||||| ||||||    
T  25710494 aacactctctttaatattcattctcttattggtttaaattattgtgggtctacactttgaaaatagaactcatacgaagtggtaggacat 25710583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 105 - 188
Target Start/End: Original strand, 17537130 - 17537213
Alignment:
Q  105 ctctctaatactcactctcttattggtttaaattattgtgggtctacactttgaaaattgaacctacacaaagtggtgggacat 188  Q
    |||||| ||| |||||||||||||||||||||| ||| ||| ||||||||||||||||| |||| ||| ||| |||||||||||    
T  17537130 ctctcttatattcactctcttattggtttaaatcattatggatctacactttgaaaattaaaccaacaaaaattggtgggacat 17537213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 110 - 189
Target Start/End: Original strand, 28090262 - 28090341
Alignment:
Q  110 taatactcactctcttattggtttaaattattgtgggtctacactttgaaaattgaacctacacaaagtggtgggacatg 189  Q
    ||||| ||||||| |||||||||||||| ||||| | |||| ||||||||||||||||  ||||||||||||||||||||    
T  28090262 taatattcactcttttattggtttaaatcattgttgatctaaactttgaaaattgaactcacacaaagtggtgggacatg 28090341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 91 - 157
Target Start/End: Original strand, 30325888 - 30325954
Alignment:
Q  91 ctcttttgaacaccctctctaatactcactctcttattggtttaaattattgtgggtctacactttg 157  Q
    ||||||||||||| |||||||||||||||| |||||||||||||||| |||| || |||||||||||    
T  30325888 ctcttttgaacactctctctaatactcactttcttattggtttaaatcattgcggatctacactttg 30325954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 91 - 188
Target Start/End: Original strand, 34384705 - 34384802
Alignment:
Q  91 ctcttttgaacaccctctctaatactcactctcttattggtttaaattattgtgggtctacactttgaaaattgaacctacacaaagtggtgggacat 188  Q
    ||||||||||||| |||| ||||||||||||| |||| ||| ||||| |||||| ||||| | ||||||||||||||  ||||||| | |||||||||    
T  34384705 ctcttttgaacactctctttaatactcactcttttatcggtctaaatcattgtgagtctataatttgaaaattgaactcacacaaaatagtgggacat 34384802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 107 - 188
Target Start/End: Complemental strand, 43405543 - 43405462
Alignment:
Q  107 ctctaatactcactctcttattggtttaaattattgtgggtctacactttgaaaattgaacctacacaaagtggtgggacat 188  Q
    |||| ||| |||||||||||||| ||||||| ||||||||||||||||||| |||| |||| || ||||||||||| |||||    
T  43405543 ctctgatattcactctcttattgatttaaatcattgtgggtctacactttggaaatagaacatatacaaagtggtgagacat 43405462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 94 - 188
Target Start/End: Original strand, 1923569 - 1923663
Alignment:
Q  94 ttttgaacaccctctctaatactcactctcttattggtttaaattattgtgggtctacactttgaaaattgaacctacacaaagtggtgggacat 188  Q
    ||||||||| | ||||||||||||| | |||||||||||||||| |||||    ||||||||| ||||||||||  ||||||||||||| |||||    
T  1923569 ttttgaacatcatctctaatactcattatcttattggtttaaatcattgtaaaactacactttaaaaattgaactcacacaaagtggtgtgacat 1923663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 116 - 185
Target Start/End: Complemental strand, 25630948 - 25630879
Alignment:
Q  116 tcactctcttattggtttaaattattgtgggtctacactttgaaaattgaacctacacaaagtggtggga 185  Q
    ||||| ||| |||||||||||| || ||||||||||||||||||||||||||||| ||||| | ||||||    
T  25630948 tcactttctaattggtttaaatcatcgtgggtctacactttgaaaattgaacctatacaaaatagtggga 25630879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 91 - 188
Target Start/End: Complemental strand, 25919377 - 25919280
Alignment:
Q  91 ctcttttgaacaccctctctaatactcactctcttattggtttaaattattgtgggtctacactttgaaaattgaacctacacaaagtggtgggacat 188  Q
    |||||||||| ||  ||| ||||| ||| | | |||||||||||||| |||||| |||||||||||||||||||| || ||||||| ||||| |||||    
T  25919377 ctcttttgaatactttctttaatattcatttttttattggtttaaatcattgtgagtctacactttgaaaattgatcccacacaaaatggtgagacat 25919280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 78 - 188
Target Start/End: Original strand, 28611777 - 28611889
Alignment:
Q  78 aatgctagcaacactct--tttgaacaccctctctaatactcactctcttattggtttaaattattgtgggtctacactttgaaaattgaacctacacaa 175  Q
    |||||||||||||||||  ||||| ||| |||||||| ||  ||||| |||||| ||||||| |||||| ||||||||||| ||||| ||||  | ||||    
T  28611777 aatgctagcaacactctcttttgagcactctctctaacaccaactcttttattgatttaaatcattgtgcgtctacactttaaaaatggaactcatacaa 28611876  T
Q  176 agtggtgggacat 188  Q
    |||| ||||||||    
T  28611877 agtgatgggacat 28611889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 124 - 188
Target Start/End: Original strand, 31885878 - 31885942
Alignment:
Q  124 ttattggtttaaattattgtgggtctacactttgaaaattgaacctacacaaagtggtgggacat 188  Q
    |||||||||||||| ||||| | ||||||||||||||||||||||| || ||| |||||||||||    
T  31885878 ttattggtttaaatcattgtagatctacactttgaaaattgaacctccagaaaatggtgggacat 31885942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 124 - 176
Target Start/End: Original strand, 36337937 - 36337989
Alignment:
Q  124 ttattggtttaaattattgtgggtctacactttgaaaattgaacctacacaaa 176  Q
    |||||||||||||| ||||||||||||||||||| ||||||||| ||||||||    
T  36337937 ttattggtttaaatcattgtgggtctacactttggaaattgaacatacacaaa 36337989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 116 - 181
Target Start/End: Original strand, 10666727 - 10666792
Alignment:
Q  116 tcactctcttattggtttaaattattgtgggtctacactttgaaaattgaacctacacaaagtggt 181  Q
    |||||||||||||||||||||||| |||| ||||||| ||| ||||| ||||| ||| ||||||||    
T  10666727 tcactctcttattggtttaaattaatgtgagtctacaatttaaaaatggaacccacataaagtggt 10666792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 105 - 188
Target Start/End: Complemental strand, 10950238 - 10950155
Alignment:
Q  105 ctctctaatactcactctcttattggtttaaattattgtgggtctacactttgaaaattgaacctacacaaagtggtgggacat 188  Q
    |||||||||| ||| ||||||||| |||||||| ||| || ||||| ||||||||||| ||| | | ||||| |||||||||||    
T  10950238 ctctctaatattcattctcttattagtttaaatcattatgagtctatactttgaaaatagaatccatacaaaatggtgggacat 10950155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 99 - 166
Target Start/End: Original strand, 34479973 - 34480040
Alignment:
Q  99 aacaccctctctaatactcactctcttattggtttaaattattgtgggtctacactttgaaaattgaa 166  Q
    |||| ||| ||||||||| | |||||||| | ||||||||||||||||||| |||||| |||||||||    
T  34479973 aacatcctttctaatacttaatctcttatcgatttaaattattgtgggtctgcactttaaaaattgaa 34480040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 91 - 141
Target Start/End: Complemental strand, 2935495 - 2935445
Alignment:
Q  91 ctcttttgaacaccctctctaatactcactctcttattggtttaaattatt 141  Q
    ||||||||||||   ||||||||||||||||| ||||||||||||||||||    
T  2935495 ctcttttgaacaatttctctaatactcactcttttattggtttaaattatt 2935445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 80 - 187
Target Start/End: Complemental strand, 4714928 - 4714819
Alignment:
Q  80 tgctagcaacactct--tttgaacaccctctctaatactcactctcttattggtttaaattattgtgggtctacactttgaaaattgaacctacacaaag 177  Q
    |||||||||||||||  ||||||||  ||||||||||    |||| |||||||| ||||| ||||||  |||||| ||||||||| ||||| |||||||     
T  4714928 tgctagcaacactctcttttgaacattctctctaatatgttctcttttattggtataaatcattgtgtatctacattttgaaaatagaacccacacaaaa 4714829  T
Q  178 tggtgggaca 187  Q
    || |||||||    
T  4714828 tgatgggaca 4714819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 105 - 188
Target Start/End: Complemental strand, 24991039 - 24990955
Alignment:
Q  105 ctctctaatactcactctcttattggtttaaattattgtgggtc-tacactttgaaaattgaacctacacaaagtggtgggacat 188  Q
    |||||||  ||||||||| ||||||| | |||| | ||| || | |||||||||||||| ||||||||| |||||||||||||||    
T  24991039 ctctctagcactcactcttttattgggtgaaatcaatgtaggacatacactttgaaaatggaacctacataaagtggtgggacat 24990955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 80 - 148
Target Start/End: Original strand, 12076063 - 12076133
Alignment:
Q  80 tgctagcaacactct--tttgaacaccctctctaatactcactctcttattggtttaaattattgtgggtc 148  Q
    |||||||||||||||  |||||||||  | ||||||||||||||||| ||||| |||||| | ||||||||    
T  12076063 tgctagcaacactctcttttgaacactttatctaatactcactctctaattggcttaaatcaatgtgggtc 12076133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 105 - 156
Target Start/End: Original strand, 17434877 - 17434928
Alignment:
Q  105 ctctctaatactcactctcttattggtttaaattattgtgggtctacacttt 156  Q
    |||||||||  ||||||| |||||||||||||| | ||||||||||||||||    
T  17434877 ctctctaatgttcactcttttattggtttaaatcaatgtgggtctacacttt 17434928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 80 - 183
Target Start/End: Complemental strand, 32401297 - 32401191
Alignment:
Q  80 tgctagcaacac--tcttttgaacaccctctctaatactcactctcttattggtttaaattattgtgggt-ctacactttgaaaattgaacctacacaaa 176  Q
    ||||||||||||  |||||||||||| |||||||||||||||||| |  |||  |||||||| ||||| | ||||  ||| ||||| ||||| ||| |||    
T  32401297 tgctagcaacaccttcttttgaacactctctctaatactcactctttagttgacttaaattaatgtggatcctacgtttttaaaatggaacccacataaa 32401198  T
Q  177 gtggtgg 183  Q
    |||||||    
T  32401197 gtggtgg 32401191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 108 - 150
Target Start/End: Original strand, 5465683 - 5465725
Alignment:
Q  108 tctaatactcactctcttattggtttaaattattgtgggtcta 150  Q
    ||||||| |||||||||||||||||||||| ||| ||||||||    
T  5465683 tctaatattcactctcttattggtttaaatcattatgggtcta 5465725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 78 - 188
Target Start/End: Original strand, 17568700 - 17568813
Alignment:
Q  78 aatgctagcaacactct--tttgaacaccctctctaatactcactctcttattggtttaaattattgtgggtc-tacactttgaaaattgaacctacaca 174  Q
    |||||||||||||||||  ||||| ||| ||| |||  || |||||| ||||||| | |||||| ||| || | ||||||||| |||| ||||||||  |    
T  17568700 aatgctagcaacactctcttttgagcactctccctagcacccactcttttattggatgaaattaatgtaggacctacactttggaaatagaacctaccta 17568799  T
Q  175 aagtggtgggacat 188  Q
    ||||||||||||||    
T  17568800 aagtggtgggacat 17568813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 91 - 188
Target Start/End: Original strand, 27592466 - 27592563
Alignment:
Q  91 ctcttttgaacaccctctctaatactcactctcttattggtttaaattattgtgggtctacactttgaaaattgaacctacacaaagtggtgggacat 188  Q
    |||||||||| || |||||   ||| ||||||||||||||||||||| ||||  | ||||||||||| |||| ||||   || ||||||||| |||||    
T  27592466 ctcttttgaatactctctcctgtacccactctcttattggtttaaatcattgcagatctacactttggaaatagaactcgcataaagtggtgagacat 27592563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 105 - 188
Target Start/End: Complemental strand, 24915208 - 24915124
Alignment:
Q  105 ctctctaatactcactctcttattggtttaaattattgtgggtc-tacactttgaaaattgaacctacacaaagtggtgggacat 188  Q
    |||||||  ||||||||| ||||||| | |||| | ||| || | |||||||||||||| ||||| ||| |||||||||||||||    
T  24915208 ctctctagcactcactcttttattgggtgaaatcaatgtaggacatacactttgaaaatggaacccacataaagtggtgggacat 24915124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 91 - 162
Target Start/End: Original strand, 25002019 - 25002091
Alignment:
Q  91 ctcttttgaacaccctctctaatactcactctcttattggtttaaattattgtgggtct-acactttgaaaat 162  Q
    ||||||| ||||| ||||| || ||||||| ||| |||||||||||| || |||||||| |||||||| ||||    
T  25002019 ctcttttcaacactctctccaacactcactttctaattggtttaaatcatagtgggtctcacactttggaaat 25002091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 83; Significance: 2e-39; HSPs: 47)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 77 - 188
Target Start/End: Complemental strand, 43771308 - 43771195
Alignment:
Q  77 taatgctagcaacactct--tttgaacaccctctctaatactcactctcttattggtttaaattattgtgggtctacactttgaaaattgaacctacaca 174  Q
    ||||||||||||| ||||  |||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||    
T  43771308 taatgctagcaacgctctcttttgaacaccctctttaatactcactctcttattggtttaaatcattgtgggtctacactttgaaaattgaacccacaca 43771209  T
Q  175 aagtggtgggacat 188  Q
     |||||||||||||    
T  43771208 gagtggtgggacat 43771195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 92 - 188
Target Start/End: Complemental strand, 722322 - 722226
Alignment:
Q  92 tcttttgaacaccctctctaatactcactctcttattggtttaaattattgtgggtctacactttgaaaattgaacctacacaaagtggtgggacat 188  Q
    |||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||| ||||||||||||||||||||    
T  722322 tcttttgaacactctctctaatactcactctcttattggtttaaatcattgtgggtctacactttaaaaattgaacttacacaaagtggtgggacat 722226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 92 - 188
Target Start/End: Original strand, 754595 - 754691
Alignment:
Q  92 tcttttgaacaccctctctaatactcactctcttattggtttaaattattgtgggtctacactttgaaaattgaacctacacaaagtggtgggacat 188  Q
    |||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||| ||||||||||||||||||||    
T  754595 tcttttgaacactctctctaatactcactctcttattggtttaaatcattgtgggtctacactttaaaaattgaacttacacaaagtggtgggacat 754691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 78 - 188
Target Start/End: Complemental strand, 24834759 - 24834647
Alignment:
Q  78 aatgctagcaacactct--tttgaacaccctctctaatactcactctcttattggtttaaattattgtgggtctacactttgaaaattgaacctacacaa 175  Q
    |||||||||||||||||  ||| ||| | |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  24834759 aatgctagcaacactctcttttaaactctctctctaatagtcactctcttattggtttaaattattgtgggtctacactttgaaaattgaacccacacaa 24834660  T
Q  176 agtggtgggacat 188  Q
    | |||||||||||    
T  24834659 aatggtgggacat 24834647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 77 - 188
Target Start/End: Complemental strand, 8109138 - 8109025
Alignment:
Q  77 taatgctagcaacactct--tttgaacaccctctctaatactcactctcttattggtttaaattattgtgggtctacactttgaaaattgaacctacaca 174  Q
    ||||||||||||||||||  ||||||||| |||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||  |||||    
T  8109138 taatgctagcaacactctcttttgaacactctctctaatactcactttcttattggtttaaatcattgtgggtctacactttgaaaattgaacaaacaca 8109039  T
Q  175 aagtggtgggacat 188  Q
    || | |||||||||    
T  8109038 aattagtgggacat 8109025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 77 - 184
Target Start/End: Original strand, 26361306 - 26361415
Alignment:
Q  77 taatgctagcaacactct--tttgaacaccctctctaatactcactctcttattggtttaaattattgtgggtctacactttgaaaattgaacctacaca 174  Q
    ||||||||||||||||||  ||||||||||||||||||||||||||| ||||||||||||||| ||| ||||||||||||||||| |||||||| |||||    
T  26361306 taatgctagcaacactctcttttgaacaccctctctaatactcactcacttattggtttaaatcattatgggtctacactttgaatattgaacccacaca 26361405  T
Q  175 aagtggtggg 184  Q
    || |||||||    
T  26361406 aaatggtggg 26361415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 77 - 188
Target Start/End: Complemental strand, 39471339 - 39471226
Alignment:
Q  77 taatgctagcaacactct--tttgaacaccctctctaatactcactctcttattggtttaaattattgtgggtctacactttgaaaattgaacctacaca 174  Q
    |||||||| |||||||||  ||| ||||  ||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||| |||||    
T  39471339 taatgctaacaacactctcttttaaacattctctctaatactcactctcttattggtttaaatcattgtgggtctacactttgaagattgaaccaacaca 39471240  T
Q  175 aagtggtgggacat 188  Q
    ||||||||||||||    
T  39471239 aagtggtgggacat 39471226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 81 - 187
Target Start/End: Complemental strand, 47009367 - 47009259
Alignment:
Q  81 gctagcaaca--ctcttttgaacaccctctctaatactcactctcttattggtttaaattattgtgggtctacactttgaaaattgaacctacacaaagt 178  Q
    ||||||||||  |||||||||||||||||||||||||||||| |||||||||||||||| ||||||  |||||||||||||||||||||  ||||||||     
T  47009367 gctagcaacattctcttttgaacaccctctctaatactcactttcttattggtttaaatcattgtgtatctacactttgaaaattgaactcacacaaagc 47009268  T
Q  179 ggtgggaca 187  Q
    |||| ||||    
T  47009267 ggtgagaca 47009259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 77 - 185
Target Start/End: Complemental strand, 50164577 - 50164467
Alignment:
Q  77 taatgctagcaacact--cttttgaacaccctctctaatactcactctcttattggtttaaattattgtgggtctacactttgaaaattgaacctacaca 174  Q
    ||||||||| ||||||  ||||||||||| ||||||||| |||||| |||||||||||||||| |||||| |||||||||||||||||||||||  ||||    
T  50164577 taatgctagtaacactatcttttgaacactctctctaatgctcactttcttattggtttaaatcattgtgagtctacactttgaaaattgaacccccaca 50164478  T
Q  175 aagtggtggga 185  Q
    || ||||||||    
T  50164477 aaatggtggga 50164467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 81 - 179
Target Start/End: Complemental strand, 20454716 - 20454616
Alignment:
Q  81 gctagcaaca--ctcttttgaacaccctctctaatactcactctcttattggtttaaattattgtgggtctacactttgaaaattgaacctacacaaagt 178  Q
    ||||||||||  ||||||||||||| |||||||| ||||||||| |||||| ||||||| ||||||| |||||||||||||||||||||| |||||||||    
T  20454716 gctagcaacattctcttttgaacactctctctaacactcactctgttattgatttaaatcattgtggatctacactttgaaaattgaaccaacacaaagt 20454617  T
Q  179 g 179  Q
    |    
T  20454616 g 20454616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 77 - 188
Target Start/End: Complemental strand, 49077431 - 49077318
Alignment:
Q  77 taatgctagcaacactct--tttgaacaccctctctaatactcactctcttattggtttaaattattgtgggtctacactttgaaaattgaacctacaca 174  Q
    ||||||||| ||||||||  ||| |||||| |||  | ||||||  ||||||||||||||||| |||||||||||||||||| ||||||||||| |||||    
T  49077431 taatgctagtaacactctcttttaaacaccttcttgagtactcaaactcttattggtttaaatcattgtgggtctacactttaaaaattgaacccacaca 49077332  T
Q  175 aagtggtgggacat 188  Q
    ||||||||||||||    
T  49077331 aagtggtgggacat 49077318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 78 - 188
Target Start/End: Complemental strand, 22542562 - 22542450
Alignment:
Q  78 aatgctagcaacact--cttttgaacaccctctctaatactcactctcttattggtttaaattattgtgggtctacactttgaaaattgaacctacacaa 175  Q
    ||||||| |||||||  ||||||||||| || | ||||||||||||||||||| |||||||| |||||||| |||  |||||||||||||||| ||||||    
T  22542562 aatgctaacaacactatcttttgaacactctttttaatactcactctcttattagtttaaatcattgtgggactattctttgaaaattgaacccacacaa 22542463  T
Q  176 agtggtgggacat 188  Q
    |||||||| ||||    
T  22542462 agtggtggaacat 22542450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 77 - 185
Target Start/End: Original strand, 34129398 - 34129508
Alignment:
Q  77 taatgctagcaacactctttt--gaacaccctctctaatactcactctcttattggtttaaattattgtgggtctacactttgaaaattgaacctacaca 174  Q
    ||||||| |||||||||| ||  ||||||  ||||||||||||||||| |||||||||||||  |||||| ||| ||||||||||||||||||  |||||    
T  34129398 taatgctggcaacactctcttctgaacacaatctctaatactcactcttttattggtttaaaccattgtgagtccacactttgaaaattgaacacacaca 34129497  T
Q  175 aagtggtggga 185  Q
    |||||||||||    
T  34129498 aagtggtggga 34129508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 77 - 188
Target Start/End: Original strand, 24938413 - 24938526
Alignment:
Q  77 taatgctagcaacact--cttttgaacaccctctctaatactcactctcttattggtttaaattattgtgggtctacactttgaaaattgaacctacaca 174  Q
    |||||||||||||| |  ||||| |||||  ||||||||||| |||||||||||||||||||| ||||| |||||||||||| ||||||||| | | |||    
T  24938413 taatgctagcaacattatcttttcaacactttctctaatacttactctcttattggtttaaatcattgtaggtctacactttaaaaattgaatccaaaca 24938512  T
Q  175 aagtggtgggacat 188  Q
    || |||||||||||    
T  24938513 aaatggtgggacat 24938526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 77 - 188
Target Start/End: Original strand, 45310946 - 45311059
Alignment:
Q  77 taatgctagcaaca--ctcttttgaacaccctctctaatactcactctcttattggtttaaattattgtgggtctacactttgaaaattgaacctacaca 174  Q
    ||||||||||||||  |||||||||||   |||||||||||| |||||||||||| ||||||| |||||  |||| |||||||||||||||| |  ||||    
T  45310946 taatgctagcaacattctcttttgaactgactctctaatacttactctcttattgatttaaatcattgtaagtcttcactttgaaaattgaatccccaca 45311045  T
Q  175 aagtggtgggacat 188  Q
    ||||||||||||||    
T  45311046 aagtggtgggacat 45311059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 77 - 188
Target Start/End: Complemental strand, 49242352 - 49242239
Alignment:
Q  77 taatgctagcaacactct--tttgaacaccctctctaatactcactctcttattggtttaaattattgtgggtctacactttgaaaattgaacctacaca 174  Q
    |||||||| |||||||||  ||| ||||| |||| | ||||||| |||||||||||||||||| ||||||  ||||||| |||||||||||||| |||||    
T  49242352 taatgctaacaacactctcttttaaacactctctatgatactcattctcttattggtttaaatcattgtgaatctacacattgaaaattgaacccacaca 49242253  T
Q  175 aagtggtgggacat 188  Q
    ||||| ||||||||    
T  49242252 aagtgatgggacat 49242239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 119 - 193
Target Start/End: Original strand, 20225383 - 20225457
Alignment:
Q  119 ctctcttattggtttaaattattgtgggtctacactttgaaaattgaacctacacaaagtggtgggacatgcatg 193  Q
    ||||||||||||||||||| |||||| |||||||||||| |||| ||||| ||| ||||||||||||||||||||    
T  20225383 ctctcttattggtttaaatcattgtgagtctacactttggaaatagaacccacaaaaagtggtgggacatgcatg 20225457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 91 - 167
Target Start/End: Original strand, 37451027 - 37451103
Alignment:
Q  91 ctcttttgaacaccctctctaatactcactctcttattggtttaaattattgtgggtctacactttgaaaattgaac 167  Q
    ||||||| |||||| ||||||||||||||||| |||||||||||||| |||| | ||||||||||||||||| ||||    
T  37451027 ctcttttaaacaccttctctaatactcactcttttattggtttaaatcattgcgagtctacactttgaaaatagaac 37451103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 79 - 188
Target Start/End: Original strand, 48339340 - 48339451
Alignment:
Q  79 atgctagcaacactc--ttttgaacaccctctctaatactcactctcttattggtttaaattattgtgggtctacactttgaaaattgaacctacacaaa 176  Q
    |||||||||||||||  |||||| |||  ||||||| |  |||||| |||||||||||||  ||| ||||||||| |||||||||||||||| |||||||    
T  48339340 atgctagcaacactcgtttttgagcactttctctaacatccactcttttattggtttaaagcattatgggtctacgctttgaaaattgaacccacacaaa 48339439  T
Q  177 gtggtgggacat 188  Q
    ||||||| ||||    
T  48339440 gtggtggaacat 48339451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 110 - 182
Target Start/End: Original strand, 50652369 - 50652441
Alignment:
Q  110 taatactcactctcttattggtttaaattattgtgggtctacactttgaaaattgaacctacacaaagtggtg 182  Q
    ||||| ||||| |||||||| |||||||||||||  ||||||| |||||||||||||||||||||||||||||    
T  50652369 taatattcactttcttattgatttaaattattgtacgtctacattttgaaaattgaacctacacaaagtggtg 50652441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 110 - 181
Target Start/End: Original strand, 46536295 - 46536366
Alignment:
Q  110 taatactcactctcttattggtttaaattattgtgggtctacactttgaaaattgaacctacacaaagtggt 181  Q
    ||||| |||||||||||||| |||||| || ||||||| ||||||||||||||||||| |||||||||||||    
T  46536295 taatattcactctcttattgctttaaaatagtgtgggtttacactttgaaaattgaacatacacaaagtggt 46536366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 82 - 188
Target Start/End: Original strand, 10169648 - 10169756
Alignment:
Q  82 ctagcaacactcttttg--aacaccctctctaatactcactctcttattggtttaaattattgtgggtctacactttgaaaattgaacctacacaaagtg 179  Q
    ||||||||||||||||   |||| ||| | ||||| |||||||||||||||||||||| ||||||| ||||   ||||||||||||||  ||||||||||    
T  10169648 ctagcaacactctttttttaacatcctttttaatattcactctcttattggtttaaataattgtggatctatgttttgaaaattgaactcacacaaagtg 10169747  T
Q  180 gtgggacat 188  Q
    || ||||||    
T  10169748 gtaggacat 10169756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 99 - 188
Target Start/End: Original strand, 33653511 - 33653600
Alignment:
Q  99 aacaccctctctaatactcactctcttattggtttaaattattgtgggtctacactttgaaaattgaacctacacaaagtggtgggacat 188  Q
    ||||| |||||||||||||||| |||||||||||||||| ||||||| || | | ||||||||||||| |  |||||| |||||||||||    
T  33653511 aacactctctctaatactcactttcttattggtttaaatcattgtggatcaatattttgaaaattgaaaccccacaaaatggtgggacat 33653600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 94 - 155
Target Start/End: Original strand, 40991606 - 40991667
Alignment:
Q  94 ttttgaacaccctctctaatactcactctcttattggtttaaattattgtgggtctacactt 155  Q
    |||||||||| |||||| ||||||||||| |||||||||||||| |||||||||||||||||    
T  40991606 ttttgaacactctctctgatactcactcttttattggtttaaatcattgtgggtctacactt 40991667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 108 - 193
Target Start/End: Original strand, 45081773 - 45081858
Alignment:
Q  108 tctaatactcactctcttattggtttaaattattgtgggtctacactttgaaaattgaacctacacaaagtggtgggacatgcatg 193  Q
    ||||||||||||||| ||||||||||||||||||||| || ||||||||| |||| | ||| ||||||| |||| | |||||||||    
T  45081773 tctaatactcactcttttattggtttaaattattgtgagtgtacactttggaaataggacccacacaaaatggtagaacatgcatg 45081858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 80 - 188
Target Start/End: Complemental strand, 19447311 - 19447200
Alignment:
Q  80 tgctagcaacactct--tttgaacaccctctctaatactcactctcttattggtttaaattattgtgggt-ctacactttgaaaattgaacctacacaaa 176  Q
    |||||||||||||||  ||||||||| |||| ||||||||||||||| ||||  |||||| ||||| ||| || || ||||||||| ||||| ||| |||    
T  19447311 tgctagcaacactctcttttgaacactctctttaatactcactctctaattgagttaaatcattgtcggtcctgcattttgaaaatggaacccacataaa 19447212  T
Q  177 gtggtgggacat 188  Q
    ||||||||||||    
T  19447211 gtggtgggacat 19447200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 116 - 188
Target Start/End: Original strand, 50481584 - 50481656
Alignment:
Q  116 tcactctcttattggtttaaattattgtgggtctacactttgaaaattgaacctacacaaagtggtgggacat 188  Q
    |||||||||||||||||||||| |||||| ||||||||||||||||| ||| | | ||||||||||| |||||    
T  50481584 tcactctcttattggtttaaatgattgtgtgtctacactttgaaaatagaaaccatacaaagtggtgagacat 50481656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 77 - 188
Target Start/End: Original strand, 31250880 - 31250994
Alignment:
Q  77 taatgctagcaacactct--tttgaacaccctctctaa-tactcactctcttattggtttaaattattgtgggtctacactttgaaaattgaacctacac 173  Q
    ||||||||||||||||||  ||| || || |||||||| || | ||||| |||||| ||||||| |||||||||||||| |||||||||||||| | ||     
T  31250880 taatgctagcaacactctattttaaatactctctctaaatatttactcttttattgatttaaatcattgtgggtctacattttgaaaattgaacgtccat 31250979  T
Q  174 aaagtggtgggacat 188  Q
    ||| |||||||||||    
T  31250980 aaaatggtgggacat 31250994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 91 - 188
Target Start/End: Original strand, 25719126 - 25719224
Alignment:
Q  91 ctcttttgaacaccctctctaatactcactctcttattggtttaaattattgtgggt-ctacactttgaaaattgaacctacacaaagtggtgggacat 188  Q
    ||||||||||||   ||||||||||||||||||| ||||| |||||| ||||||||| ||||| |||| ||||  |||| ||| |||||||||||||||    
T  25719126 ctcttttgaacaatttctctaatactcactctctgattgggttaaatcattgtgggtcctacattttggaaatgaaacccacataaagtggtgggacat 25719224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 95 - 189
Target Start/End: Complemental strand, 29699650 - 29699557
Alignment:
Q  95 tttgaacaccctctctaatactcactctcttattggtttaaattattgtgggtctacactttgaaaattgaacctacacaaagtggtgggacatg 189  Q
    |||| |||| || ||||||| |||||||||||||| ||||||| ||||| || ||| |||||| |||| ||||| ||||||||||||||||||||    
T  29699650 tttgtacactctatctaatattcactctcttattgttttaaatcattgtcgggctatactttg-aaatagaaccaacacaaagtggtgggacatg 29699557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 92 - 188
Target Start/End: Complemental strand, 52671995 - 52671899
Alignment:
Q  92 tcttttgaacaccctctctaatactcactctcttattggtttaaattattgtgggtctacactttgaaaattgaacctacacaaagtggtgggacat 188  Q
    |||||| ||||| |||| ||||||||||| ||||||| |||||||| |||| |  | |||||||| |||||||||| |||| ||| |||||||||||    
T  52671995 tcttttaaacactctctttaatactcactatcttattagtttaaatcattgagaatttacactttaaaaattgaacttacataaaatggtgggacat 52671899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 77 - 160
Target Start/End: Complemental strand, 11895220 - 11895134
Alignment:
Q  77 taatgctagcaacactct--tttgaacaccctct-ctaatactcactctcttattggtttaaattattgtgggtctacactttgaaa 160  Q
    ||||||||||||||||||  |||||||||  | | ||| |||||||||||||||| ||| |||| ||||||||||||||||||||||    
T  11895220 taatgctagcaacactctcttttgaacacttttttctattactcactctcttattcgttcaaatcattgtgggtctacactttgaaa 11895134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 133 - 188
Target Start/End: Original strand, 46242000 - 46242055
Alignment:
Q  133 taaattattgtgggtctacactttgaaaattgaacctacacaaagtggtgggacat 188  Q
    ||||| |||||||||||| | ||||||||||||||||||||||| |||||||||||    
T  46242000 taaatcattgtgggtctatattttgaaaattgaacctacacaaaatggtgggacat 46242055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 124 - 194
Target Start/End: Original strand, 41153245 - 41153315
Alignment:
Q  124 ttattggtttaaattattgtgggtctacactttgaaaattgaacctacacaaagtggtgggacatgcatga 194  Q
    |||||||| ||||| ||||||  | ||||||||  |||| |||||||||||||||||||||||||||||||    
T  41153245 ttattggtctaaatcattgtgaatgtacactttagaaatagaacctacacaaagtggtgggacatgcatga 41153315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 77 - 188
Target Start/End: Original strand, 43124512 - 43124625
Alignment:
Q  77 taatgctagcaacactct--tttgaacaccctctctaatactcactctcttattggtttaaattattgtgggtctacactttgaaaattgaacctacaca 174  Q
    |||||||| ||||||| |  ||||||||| || | |||||| |||||||||||||||||||||  |  ||||| |||| |||||||||  | ||||||||    
T  43124512 taatgctaacaacactttcctttgaacactctttataatacgcactctcttattggtttaaatcttcatgggtatacagtttgaaaataaagcctacaca 43124611  T
Q  175 aagtggtgggacat 188  Q
    || |||||||||||    
T  43124612 aaatggtgggacat 43124625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 94 - 166
Target Start/End: Original strand, 52279276 - 52279348
Alignment:
Q  94 ttttgaacaccctctctaatactcactctcttattggtttaaattattgtgggtctacactttgaaaattgaa 166  Q
    |||| ||||| || ||||||| |||||||| ||||| | ||||| |||||||||||| |||||||||||||||    
T  52279276 ttttaaacactctatctaatattcactctcctattgatctaaatcattgtgggtctaaactttgaaaattgaa 52279348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 105 - 176
Target Start/End: Original strand, 5044568 - 5044639
Alignment:
Q  105 ctctctaatactcactctcttattggtttaaattattgtgggtctacactttgaaaattgaacctacacaaa 176  Q
    |||||||||| ||| ||| ||||||||||||||  ||||||||||||| ||| ||||||||||  |||||||    
T  5044568 ctctctaatattcattcttttattggtttaaatcgttgtgggtctacattttaaaaattgaactcacacaaa 5044639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 91 - 188
Target Start/End: Complemental strand, 5545745 - 5545647
Alignment:
Q  91 ctcttttgaacaccctctctaatactcactctcttattggtttaaattattgtgggtc-tacactttgaaaattgaacctacacaaagtggtgggacat 188  Q
    ||||||||||||| |||||||||||| ||| | | ||| | |||||| | |||||||| |||| ||||||||| || || ||| |||||||||||||||    
T  5545745 ctcttttgaacactctctctaatacttactttttaatttgcttaaatcaatgtgggtcttacattttgaaaatggagcccacataaagtggtgggacat 5545647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 110 - 166
Target Start/End: Complemental strand, 2861024 - 2860968
Alignment:
Q  110 taatactcactctcttattggtttaaattattgtgggtctacactttgaaaattgaa 166  Q
    ||||||||||||  | ||||| ||||| |||||||| ||||||||||||||||||||    
T  2861024 taatactcactcggtgattggcttaaactattgtggatctacactttgaaaattgaa 2860968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 82 - 137
Target Start/End: Complemental strand, 25719286 - 25719231
Alignment:
Q  82 ctagcaacactcttttgaacaccctctctaatactcactctcttattggtttaaat 137  Q
    ||||||||||||||||  |||| ||||| || ||||||||||||||||||| ||||    
T  25719286 ctagcaacactcttttttacactctctcaaacactcactctcttattggttgaaat 25719231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 77 - 157
Target Start/End: Original strand, 38537511 - 38537593
Alignment:
Q  77 taatgctagcaacact--cttttgaacaccctctctaatactcactctcttattggtttaaattattgtgggtctacactttg 157  Q
    ||||| ||||||||||  ||||||||||| |||||||||| ||| ||| |||||| ||||||| ||| ||  |||||||||||    
T  38537511 taatgttagcaacactttcttttgaacactctctctaataatcattcttttattgatttaaatcattatgaatctacactttg 38537593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 111 - 166
Target Start/End: Complemental strand, 46287587 - 46287532
Alignment:
Q  111 aatactcactctcttattggtttaaattattgtgggtctacactttgaaaattgaa 166  Q
    ||||| |||| || ||||||||||||| |||||| ||| |||||||||||||||||    
T  46287587 aatacccactttcgtattggtttaaatcattgtgagtcaacactttgaaaattgaa 46287532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 122 - 188
Target Start/End: Complemental strand, 13520084 - 13520018
Alignment:
Q  122 tcttattggtttaaattattgtgggtctacactttgaaaattgaacctacacaaagtggtgggacat 188  Q
    |||||||||||||||| ||||||||| ||||| ||| |||  |||||  ||||||||||||| ||||    
T  13520084 tcttattggtttaaatcattgtgggtatacacattggaaacagaacccgcacaaagtggtggaacat 13520018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 105 - 182
Target Start/End: Complemental strand, 34961801 - 34961727
Alignment:
Q  105 ctctctaatactcactctcttattggtttaaattattgtgggtctacactttgaaaattgaacctacacaaagtggtg 182  Q
    |||| ||||||||||||| ||||| |||||||||||||||  |||  | ||||||||||||||| | |||||||||||    
T  34961801 ctctttaatactcactcttttattagtttaaattattgtgactct--attttgaaaattgaaccca-acaaagtggtg 34961727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 91 - 188
Target Start/End: Original strand, 19937186 - 19937283
Alignment:
Q  91 ctcttttgaacaccctctctaatactcactctcttattggtttaaattattgtgggtctacactttgaaaattgaacctacacaaagtggtgggacat 188  Q
    ||||||| ||||| |||| |||| |||||||| || ||||||| ||| ||||| | |||| ||||||||||| ||||  ||| | | |||||||||||    
T  19937186 ctcttttaaacactctctttaattctcactcttttgttggtttgaatcattgtcgatctatactttgaaaatagaactcacatataatggtgggacat 19937283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 147 - 188
Target Start/End: Original strand, 30867002 - 30867043
Alignment:
Q  147 tctacactttgaaaattgaacctacacaaagtggtgggacat 188  Q
    |||||||||||||||| ||||| ||| |||||||||||||||    
T  30867002 tctacactttgaaaatggaacccacataaagtggtgggacat 30867043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 77 - 120
Target Start/End: Complemental strand, 11127900 - 11127856
Alignment:
Q  77 taatgctagcaacactctttt-gaacaccctctctaatactcact 120  Q
    |||| ||| |||||||||||| |||||||||||||||||||||||    
T  11127900 taatcctatcaacactctttttgaacaccctctctaatactcact 11127856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 83; Significance: 2e-39; HSPs: 47)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 77 - 188
Target Start/End: Complemental strand, 8899196 - 8899083
Alignment:
Q  77 taatgctagcaaca--ctcttttgaacaccctctctaatactcactctcttattggtttaaattattgtgggtctacactttgaaaattgaacctacaca 174  Q
    ||||||||||||||  ||||||||||||| |||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||| |||||    
T  8899196 taatgctagcaacaatctcttttgaacactctctctaatactcactctcttattggtttaaattattgtggacctacactttgaaaattgaacccacaca 8899097  T
Q  175 aagtggtgggacat 188  Q
    ||| ||||||||||    
T  8899096 aaggggtgggacat 8899083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 78 - 188
Target Start/End: Original strand, 30678910 - 30679022
Alignment:
Q  78 aatgctagcaacactctttt--gaacaccctctctaatactcactctcttattggtttaaattattgtgggtctacactttgaaaattgaacctacacaa 175  Q
    ||||||||||||||||||||  || ||| |||||||| ||||||||||||||||| |||||| |||||| ||||||||||||||||||||||| ||||||    
T  30678910 aatgctagcaacactcttttttgagcactctctctaacactcactctcttattggcttaaatcattgtgagtctacactttgaaaattgaacccacacaa 30679009  T
Q  176 agtggtgggacat 188  Q
    |||||||||||||    
T  30679010 agtggtgggacat 30679022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 77 - 188
Target Start/End: Original strand, 10659767 - 10659879
Alignment:
Q  77 taatgctagcaacact--cttttgaacaccctctctaatactcactctcttattggtttaaattattgtgggtctacactttgaaaattgaacctacaca 174  Q
    |||||||||||||| |  |||||||||||  |||||||||| ||||||||||||||||||||| || |||||||||||||||||||||||||||||||||    
T  10659767 taatgctagcaacattttcttttgaacactttctctaatac-cactctcttattggtttaaatcatcgtgggtctacactttgaaaattgaacctacaca 10659865  T
Q  175 aagtggtgggacat 188  Q
    ||||||| ||||||    
T  10659866 aagtggtcggacat 10659879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 77 - 188
Target Start/End: Original strand, 6133623 - 6133735
Alignment:
Q  77 taatgctagcaacactct--tttgaacaccctctctaatactcactctcttattggtttaaattattgtgggtctacactttgaaaattgaacctacaca 174  Q
    ||||| ||||||||||||  |||||||| |||||||||||||||||||||||||||||| ||| ||||||||| || ||||||||||||||||| |||||    
T  6133623 taatgttagcaacactctcttttgaacatcctctctaatactcactctcttattggttt-aatcattgtgggtgtagactttgaaaattgaacccacaca 6133721  T
Q  175 aagtggtgggacat 188  Q
    |  |||||||||||    
T  6133722 atatggtgggacat 6133735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 91 - 181
Target Start/End: Original strand, 41948160 - 41948250
Alignment:
Q  91 ctcttttgaacaccctctctaatactcactctcttattggtttaaattattgtgggtctacactttgaaaattgaacctacacaaagtggt 181  Q
    ||||||||||||| |||||||| |||||||||||||||| ||||||| ||||||| | |||||||||||||||||||| ||||||||||||    
T  41948160 ctcttttgaacactctctctaacactcactctcttattgatttaaatcattgtggatttacactttgaaaattgaaccaacacaaagtggt 41948250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 95 - 188
Target Start/End: Complemental strand, 33193212 - 33193119
Alignment:
Q  95 tttgaacaccctctctaatactcactctcttattggtttaaattattgtgggtctacactttgaaaattgaacctacacaaagtggtgggacat 188  Q
    |||||||||  ||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||  |||||| |||||| ||||    
T  33193212 tttgaacactttctctaatactcattctcttattggtttaaatcattgtgggtctacactttgaaaattgaaccctcacaaaatggtggcacat 33193119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 99 - 188
Target Start/End: Complemental strand, 41958241 - 41958152
Alignment:
Q  99 aacaccctctctaatactcactctcttattggtttaaattattgtgggtctacactttgaaaattgaacctacacaaagtggtgggacat 188  Q
    ||||| || |||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||  |||||| |||||||||||    
T  41958241 aacactctttctaatactcactctcttattggtttaaatcactgtgggtctacactttgaaaattgaacccccacaaaatggtgggacat 41958152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 77 - 188
Target Start/End: Complemental strand, 11987808 - 11987695
Alignment:
Q  77 taatgctagcaacactct--tttgaacaccctctctaatactcactctcttattggtttaaattattgtgggtctacactttgaaaattgaacctacaca 174  Q
    ||||||||||||||||||  ||| ||||| || |||||||  |||||||||| |||||||||| ||||||||||||||||||||||||||||||  |||     
T  11987808 taatgctagcaacactctcttttaaacactctttctaatatccactctcttaatggtttaaatcattgtgggtctacactttgaaaattgaacccgcact 11987709  T
Q  175 aagtggtgggacat 188  Q
    ||||||||| ||||    
T  11987708 aagtggtggaacat 11987695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 77 - 188
Target Start/End: Original strand, 28218044 - 28218159
Alignment:
Q  77 taatgctagcaacactct--tttgaacac--cctctctaatactcactctcttattggtttaaattattgtgggtctacactttgaaaattgaacctaca 172  Q
    ||||||||||||||||||  |||||||||  || |||||||||||||| |||||||  ||||||||| ||||| |||||||||||||||||||| | |||    
T  28218044 taatgctagcaacactctcttttgaacactcccgctctaatactcactatcttattaatttaaattactgtggttctacactttgaaaattgaatccaca 28218143  T
Q  173 caaagtggtgggacat 188  Q
    |||||||||| |||||    
T  28218144 caaagtggtgagacat 28218159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 99 - 188
Target Start/End: Complemental strand, 29673633 - 29673544
Alignment:
Q  99 aacaccctctctaatactcactctcttattggtttaaattattgtgggtctacactttgaaaattgaacctacacaaagtggtgggacat 188  Q
    ||||| |||||||||||||||| | |||||||||||||| ||||| | |||||||||||||||||||| ||||||||| |||||||||||    
T  29673633 aacactctctctaatactcacttttttattggtttaaataattgtagttctacactttgaaaattgaaactacacaaaatggtgggacat 29673544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 91 - 188
Target Start/End: Original strand, 19101615 - 19101712
Alignment:
Q  91 ctcttttgaacaccctctctaatactcactctcttattggtttaaattattgtgggtctacactttgaaaattgaacctacacaaagtggtgggacat 188  Q
    ||||||||||||| |||||||||||||||| |||||||||||||||| ||||  | |||||||||||||||| ||||   || |||||||||||||||    
T  19101615 ctcttttgaacactctctctaatactcactttcttattggtttaaatcattgcagatctacactttgaaaatagaactcgcataaagtggtgggacat 19101712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 79 - 188
Target Start/End: Original strand, 26980262 - 26980373
Alignment:
Q  79 atgctagcaacactct--tttgaacaccctctctaatactcactctcttattggtttaaattattgtgggtctacactttgaaaattgaacctacacaaa 176  Q
    ||||||||||||||||  ||| ||||| |||| |||||||||||||||||||| ||||||| ||||||| | || | ||||||||||||||  |||||||    
T  26980262 atgctagcaacactctcttttcaacactctctataatactcactctcttattgatttaaatcattgtggatgtatattttgaaaattgaactcacacaaa 26980361  T
Q  177 gtggtgggacat 188  Q
     |||||||||||    
T  26980362 atggtgggacat 26980373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 91 - 178
Target Start/End: Complemental strand, 15468386 - 15468299
Alignment:
Q  91 ctcttttgaacaccctctctaatactcactctcttattggtttaaattattgtgggtctacactttgaaaattgaacctacacaaagt 178  Q
    |||||||||||||  |||| |||||| ||||| |||||  |||||||||||||||||||||||| ||||||||||||| |||||||||    
T  15468386 ctcttttgaacactatctcaaatacttactcttttattaatttaaattattgtgggtctacactatgaaaattgaacccacacaaagt 15468299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 114 - 188
Target Start/End: Original strand, 3872671 - 3872745
Alignment:
Q  114 actcactctcttattggtttaaattattgtgggtctacactttgaaaattgaacctacacaaagtggtgggacat 188  Q
    |||| |||| |||||||||| ||| ||||||||||||||||||| |||||||||||||||||||||||| |||||    
T  3872671 actctctcttttattggtttgaatcattgtgggtctacactttggaaattgaacctacacaaagtggtgtgacat 3872745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 91 - 188
Target Start/End: Complemental strand, 2225390 - 2225293
Alignment:
Q  91 ctcttttgaacaccctctctaatactcactctcttattggtttaaattattgtgggtctacactttgaaaattgaacctacacaaagtggtgggacat 188  Q
    ||||||||||||| || | | ||||||||| |||||||||||||||| | ||| ||||||||||||| |||  ||||| |||||||||||||||||||    
T  2225390 ctcttttgaacacgctttgtgatactcactttcttattggtttaaatcactgtcggtctacactttgtaaaccgaacccacacaaagtggtgggacat 2225293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 91 - 176
Target Start/End: Original strand, 8741237 - 8741322
Alignment:
Q  91 ctcttttgaacaccctctctaatactcactctcttattggtttaaattattgtgggtctacactttgaaaattgaacctacacaaa 176  Q
    ||||||||||||   ||||||||||||||||||||||| |||||||| |||||| || || ||||||||||||||||| |||||||    
T  8741237 ctcttttgaacaatttctctaatactcactctcttattagtttaaatcattgtgtgtttatactttgaaaattgaacccacacaaa 8741322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 99 - 188
Target Start/End: Complemental strand, 35337018 - 35336929
Alignment:
Q  99 aacaccctctctaatactcactctcttattggtttaaattattgtgggtctacactttgaaaattgaacctacacaaagtggtgggacat 188  Q
    ||||| |||||||||||||  |||||||||||||||||| |||||| ||||||| |  |||||||||||| ||||||||||||| |||||    
T  35337018 aacactctctctaatactcgttctcttattggtttaaatcattgtgtgtctacattaagaaaattgaacccacacaaagtggtgagacat 35336929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 91 - 167
Target Start/End: Original strand, 12767342 - 12767418
Alignment:
Q  91 ctcttttgaacaccctctctaatactcactctcttattggtttaaattattgtgggtctacactttgaaaattgaac 167  Q
    |||||||||| ||||||||||||||||||||| |||||||||||||| ||| || ||||||||||| ||||| ||||    
T  12767342 ctcttttgaaaaccctctctaatactcactcttttattggtttaaatcattatgagtctacactttaaaaatagaac 12767418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 93 - 188
Target Start/End: Complemental strand, 33114135 - 33114040
Alignment:
Q  93 cttttgaacaccctctctaatactcactctcttattggtttaaattattgtgggtctacactttgaaaattgaacctacacaaagtggtgggacat 188  Q
    ||||| ||||| |||| ||  ||||||| | |||||||||||||| ||| ||| |||||||||||||||||||||||||| ||| |||||||||||    
T  33114135 cttttaaacactctctataggactcacttttttattggtttaaatcattctggatctacactttgaaaattgaacctacataaaatggtgggacat 33114040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 126 - 188
Target Start/End: Complemental strand, 49730995 - 49730933
Alignment:
Q  126 attggtttaaattattgtgggtctacactttgaaaattgaacctacacaaagtggtgggacat 188  Q
    |||||||||||| |||||||||||||||||||||||||||||| ||||||||| ||| |||||    
T  49730995 attggtttaaatcattgtgggtctacactttgaaaattgaacccacacaaagtagtgtgacat 49730933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 78 - 188
Target Start/End: Complemental strand, 931555 - 931443
Alignment:
Q  78 aatgctagcaacactctt--ttgaacaccctctctaatactcactctcttattggtttaaattattgtgggtctacactttgaaaattgaacctacacaa 175  Q
    ||||||||||||||||||  || |||||  | ||||||| ||||||| |||||||||||||| ||||||||| || | ||||||||||||||| ||| ||    
T  931555 aatgctagcaacactcttcttttaacactttttctaatattcactcttttattggtttaaatcattgtgggtgtatattttgaaaattgaacccacaaaa 931456  T
Q  176 agtggtgggacat 188  Q
    | || ||||||||    
T  931455 aatgatgggacat 931443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 91 - 188
Target Start/End: Complemental strand, 25543505 - 25543409
Alignment:
Q  91 ctcttttgaacaccctctctaatactcactctcttattggtttaaattattgtgggtctacactttgaaaattgaacctacacaaagtggtgggacat 188  Q
    ||||||||||||| |||||||||||||||| |||||||||||||||| |||||| | || ||| |||  || |  |||||||||||||||||||||||    
T  25543505 ctcttttgaacactctctctaatactcactatcttattggtttaaatcattgtgaggctgcacattgggaa-tatacctacacaaagtggtgggacat 25543409  T

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Target: chr1; HSP #23
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 78 - 188
Target Start/End: Complemental strand, 27570406 - 27570294
Alignment:
Q  78 aatgctagcaaca--ctcttttgaacaccctctctaatactcactctcttattggtttaaattattgtgggtctacactttgaaaattgaacctacacaa 175  Q
    |||||||||||||  ||||||||||||| |||||| | | ||||| ||||||| ||| |||| ||||||||| |||||||| |||||| |||  ||||||    
T  27570406 aatgctagcaacattctcttttgaacactctctctcaaattcactttcttattagttcaaatcattgtgggtttacactttaaaaattaaactcacacaa 27570307  T
Q  176 agtggtgggacat 188  Q
    | |||||||||||    
T  27570306 attggtgggacat 27570294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 91 - 188
Target Start/End: Original strand, 32211798 - 32211895
Alignment:
Q  91 ctcttttgaacaccctctctaatactcactctcttattggtttaaattattgtgggtctacactttgaaaattgaacctacacaaagtggtgggacat 188  Q
    ||||||| |||||  ||| ||||  |||||||||||||||||||||| ||||||||||||||| || ||||||||||  ||||||||| || ||||||    
T  32211798 ctcttttcaacactttctttaatgatcactctcttattggtttaaatcattgtgggtctacaccttaaaaattgaactcacacaaagtagttggacat 32211895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 91 - 187
Target Start/End: Original strand, 37552965 - 37553059
Alignment:
Q  91 ctcttttgaacaccctctctaatactcactctcttattggtttaaattattgtgggtctacactttgaaaattgaacctacacaaagtggtgggaca 187  Q
    |||||||||||||  ||| |||||||||||||||||||| ||||||| ||||||| ||||||||||||||||  |||| ||  |||||| |||||||    
T  37552965 ctcttttgaacac--tctttaatactcactctcttattgatttaaatcattgtggatctacactttgaaaataaaacccactaaaagtgatgggaca 37553059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 106 - 163
Target Start/End: Complemental strand, 51732428 - 51732371
Alignment:
Q  106 tctctaatactcactctcttattggtttaaattattgtgggtctacactttgaaaatt 163  Q
    ||||||||||||||||| |||||||||||||||||||||||| || ||||||||||||    
T  51732428 tctctaatactcactcttttattggtttaaattattgtgggtttatactttgaaaatt 51732371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 91 - 194
Target Start/End: Complemental strand, 15928719 - 15928618
Alignment:
Q  91 ctcttttgaacaccctctctaatactcactctcttattggtttaaattattgtgggtctacactttgaaaattgaacctacacaaagtggtgggacatgc 190  Q
    |||||||||||||  ||||||||||||||||| |||||||||||||| | |||  |||||||| |||||||| ||||  ||||||| ||||| ||||| |    
T  15928719 ctcttttgaacac--tctctaatactcactcttttattggtttaaatcactgtaagtctacaccttgaaaatagaactcacacaaaatggtgagacatac 15928622  T
Q  191 atga 194  Q
    ||||    
T  15928621 atga 15928618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 105 - 188
Target Start/End: Original strand, 45179274 - 45179357
Alignment:
Q  105 ctctctaatactcactctcttattggtttaaattattgtgggtctacactttgaaaattgaacctacacaaagtggtgggacat 188  Q
    |||||||||||||| | |||||||  ||||| ||||||||||| ||||||||||||||||||||  ||||||||| ||| ||||    
T  45179274 ctctctaatactcattttcttattaatttaagttattgtgggtttacactttgaaaattgaaccctcacaaagtgatggaacat 45179357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 99 - 188
Target Start/End: Complemental strand, 44272076 - 44271987
Alignment:
Q  99 aacaccctctctaatactcactctcttattggtttaaattattgtgggtctacactttgaaaattgaacctacacaaagtggtgggacat 188  Q
    ||||| || ||||||||||| | | |||||| ||||||| ||||| | |||||||||||||||||||||||||| ||| |||||| ||||    
T  44272076 aacactctttctaatactcatttttttattgatttaaatcattgttgttctacactttgaaaattgaacctacaaaaaatggtggaacat 44271987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 77 - 143
Target Start/End: Original strand, 39974198 - 39974266
Alignment:
Q  77 taatgctagcaacactct--tttgaacaccctctctaatactcactctcttattggtttaaattattgt 143  Q
    |||||||| |||||||||  ||||||||  || |||||||||||||||||||||||||||||| |||||    
T  39974198 taatgctaacaacactctcttttgaacattctttctaatactcactctcttattggtttaaatcattgt 39974266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 111 - 176
Target Start/End: Original strand, 47644331 - 47644396
Alignment:
Q  111 aatactcactctcttattggtttaaattattgtgggtctacactttgaaaattgaacctacacaaa 176  Q
    ||||||| ||||||||||| ||||||| ||||||||| ||||| |||||||| ||||| |||||||    
T  47644331 aatactcgctctcttattgatttaaatcattgtgggtttacacattgaaaatagaacccacacaaa 47644396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 78 - 151
Target Start/End: Original strand, 16948528 - 16948603
Alignment:
Q  78 aatgctagcaacactcttt--tgaacaccctctctaatactcactctcttattggtttaaattattgtgggtctac 151  Q
    ||||||||||||||||| |  ||||||   |||||||||||||||||||||||| ||||||| ||||||| |||||    
T  16948528 aatgctagcaacactctctgttgaacattttctctaatactcactctcttattgatttaaatcattgtggatctac 16948603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 91 - 183
Target Start/End: Original strand, 33059907 - 33059999
Alignment:
Q  91 ctcttttgaacaccctctctaatactcactctcttattggtttaaattattgtgggtctacactttgaaaattgaacctacacaaagtggtgg 183  Q
    |||||||||||||  | |||| ||| ||||||||||||||||||||  |||||| || |||||||| |||||| |||| ||| | ||||||||    
T  33059907 ctcttttgaacactttttctagtacccactctcttattggtttaaaacattgtgagtgtacactttaaaaattaaacccacagagagtggtgg 33059999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 105 - 188
Target Start/End: Complemental strand, 31866467 - 31866385
Alignment:
Q  105 ctctctaatactcactctcttattggtttaaattattgtgggtctacactttgaaaattgaacctacacaaagtggtgggacat 188  Q
    |||| ||||||||||| ||||||| |||||||| ||||||| | |||||||| |||||||||||| || ||| | |||||||||    
T  31866467 ctctttaatactcactttcttattagtttaaatcattgtggat-tacactttaaaaattgaaccttcaaaaaatagtgggacat 31866385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 119 - 193
Target Start/End: Complemental strand, 37525667 - 37525593
Alignment:
Q  119 ctctcttattggtttaaattattgtgggtctacactttgaaaattgaacctacacaaagtggtgggacatgcatg 193  Q
    |||||||||| |||||||| ||||| | |||| ||||||||||||||||| ||| ||| |||||| |||| ||||    
T  37525667 ctctcttattagtttaaatcattgtagatctagactttgaaaattgaacccacataaaatggtggaacatacatg 37525593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 118 - 183
Target Start/End: Complemental strand, 15906679 - 15906614
Alignment:
Q  118 actctcttattggtttaaattattgtgggtctacactttgaaaattgaacctacacaaagtggtgg 183  Q
    |||||||||||  ||||||||||||| | |||||||||||||||||||  | ||||||| ||||||    
T  15906679 actctcttattaatttaaattattgtagatctacactttgaaaattgactcgacacaaaatggtgg 15906614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 91 - 188
Target Start/End: Complemental strand, 15523372 - 15523279
Alignment:
Q  91 ctcttttgaacaccctctctaatactcactctcttattggtttaaattattgtgggtctacactttgaaaattgaacctacacaaagtggtgggacat 188  Q
    ||||||||||||| |||||||||||| |||    ||||||||||||| |||| || ||||||||||  |||| ||||   || |||||||||||||||    
T  15523372 ctcttttgaacactctctctaatactaact----tattggtttaaatcattgcggatctacactttagaaatagaactcgcataaagtggtgggacat 15523279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 91 - 188
Target Start/End: Complemental strand, 15531366 - 15531273
Alignment:
Q  91 ctcttttgaacaccctctctaatactcactctcttattggtttaaattattgtgggtctacactttgaaaattgaacctacacaaagtggtgggacat 188  Q
    ||||||||||||| |||||||||||| |||    ||||||||||||| |||| || ||||||||||  |||| ||||   || |||||||||||||||    
T  15531366 ctcttttgaacactctctctaatactaact----tattggtttaaatcattgcggatctacactttagaaatagaactcgcataaagtggtgggacat 15531273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 91 - 188
Target Start/End: Complemental strand, 22540530 - 22540437
Alignment:
Q  91 ctcttttgaacaccctctctaatactcactctcttattggtttaaattattgtgggtctacactttgaaaattgaacctacacaaagtggtgggacat 188  Q
    ||||||||||||| |||| ||||||| |||    ||||||||||||| |||| || ||||||||||| |||| ||||   || |||||||||||||||    
T  22540530 ctcttttgaacactctctttaatactaact----tattggtttaaatcattgcggatctacactttggaaatagaactcgcataaagtggtgggacat 22540437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 109 - 189
Target Start/End: Complemental strand, 31074863 - 31074784
Alignment:
Q  109 ctaatactcactctcttattggtttaaattattgtgggtctacactttgaaaattgaacctacacaaagtggtgggacatg 189  Q
    ||||||| ||||||||||||||| ||| | |||||||||||||| ||||||||| ||| | ||| |||||| | |||||||    
T  31074863 ctaatacccactctcttattggtctaa-tcattgtgggtctacattttgaaaatagaatcaacataaagtgttaggacatg 31074784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 91 - 137
Target Start/End: Original strand, 21466634 - 21466680
Alignment:
Q  91 ctcttttgaacaccctctctaatactcactctcttattggtttaaat 137  Q
    ||||||||||||| |||||||||| ||||| |||||||| |||||||    
T  21466634 ctcttttgaacactctctctaatattcactttcttattgatttaaat 21466680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 91 - 168
Target Start/End: Complemental strand, 36567056 - 36566985
Alignment:
Q  91 ctcttttgaacaccctctctaatactcactctcttattggtttaaattattgtgggtctacactttgaaaattgaacc 168  Q
    ||||||||||||| |||||||||||||||||| |||||      ||| ||| ||| |||||||||||||||| |||||    
T  36567056 ctcttttgaacacactctctaatactcactctattatt------aataattctggatctacactttgaaaatagaacc 36566985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 79 - 188
Target Start/End: Complemental strand, 11135920 - 11135808
Alignment:
Q  79 atgctagcaacactct--tttgaacaccctctctaatactcactctcttattggtttaaattattgtgggtc-tacactttgaaaattgaacctacacaa 175  Q
    ||||||||||||||||  |||||  || |||||||  ||||||||| ||||||| | |||| | ||| || | ||||||||| |||| ||||| ||| ||    
T  11135920 atgctagcaacactctcttttgaggactctctctagcactcactcttttattgggtgaaatcaatgtaggacctacactttggaaatggaacccacataa 11135821  T
Q  176 agtggtgggacat 188  Q
    |||||||||||||    
T  11135820 agtggtgggacat 11135808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 80 - 188
Target Start/End: Complemental strand, 28942000 - 28941891
Alignment:
Q  80 tgctagcaacactcttttgaa-caccctctctaatactcactctcttattggtttaaattattgtgggtctacactttgaaaattgaacctacacaaagt 178  Q
    |||||||||||||||||| || ||| || ||||| | |||||||||||||| ||||| | | ||||| || | |||| |||||| ||||| ||| ||  |    
T  28942000 tgctagcaacactctttttaaacactctatctaacattcactctcttattgatttaagtaaatgtggatccatacttagaaaatggaacccacataatat 28941901  T
Q  179 ggtgggacat 188  Q
    ||||||||||    
T  28941900 ggtgggacat 28941891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 91 - 167
Target Start/End: Complemental strand, 39499563 - 39499484
Alignment:
Q  91 ctcttttgaacaccctctctaatact---cactctcttattggtttaaattattgtgggtctacactttgaaaattgaac 167  Q
    |||||||||||| | ||||||||| |   |||| ||||||||  |||||| ||||||| |||||| ||||||||||||||    
T  39499563 ctcttttgaacatcttctctaatagtattcactttcttattgaattaaatcattgtggatctacattttgaaaattgaac 39499484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 105 - 184
Target Start/End: Original strand, 50424893 - 50424973
Alignment:
Q  105 ctctctaatactcactctcttattggtttaaattattgtgggtc-tacactttgaaaattgaacctacacaaagtggtggg 184  Q
    |||||||| | ||||| | ||||||| |||||| | |||||||| ||||||||| |||| |||| |||| |||||||||||    
T  50424893 ctctctaacattcacttttttattgggttaaatcaatgtgggtcatacactttggaaatggaacttacataaagtggtggg 50424973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 124 - 188
Target Start/End: Complemental strand, 50539257 - 50539193
Alignment:
Q  124 ttattggtttaaattattgtgggtctacactttgaaaattgaacctacacaaagtggtgggacat 188  Q
    ||||| |||||||| |||| | |||||||||  |||||||||||| ||| |||||||||| ||||    
T  50539257 ttattagtttaaatcattgcgtgtctacactgagaaaattgaacccacataaagtggtggaacat 50539193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 80; Significance: 1e-37; HSPs: 49)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 64 - 188
Target Start/End: Complemental strand, 27888477 - 27888351
Alignment:
Q  64 attttttagagactaatgctagcaacactct--tttgaacaccctctctaatactcactctcttattggtttaaattattgtgggtctacactttgaaaa 161  Q
    |||||||| |||  |||||||||||||||||  ||||| ||| |||||||| |||||||||||||||||||||||| |||||||||||||||||| ||||    
T  27888477 attttttatagaggaatgctagcaacactctcttttgagcactctctctaacactcactctcttattggtttaaatcattgtgggtctacactttaaaaa 27888378  T
Q  162 ttgaacctacacaaagtggtgggacat 188  Q
    ||||||| |||||||||||||||||||    
T  27888377 ttgaacccacacaaagtggtgggacat 27888351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 77 - 184
Target Start/End: Complemental strand, 22190121 - 22190012
Alignment:
Q  77 taatgctagcaacactct--tttgaacaccctctctaatactcactctcttattggtttaaattattgtgggtctacactttgaaaattgaacctacaca 174  Q
    |||||||| |||||||||  |||||||||||||||||||||||||||  |||||||||||||| |||| ||||||||||||||||||||||||| |||||    
T  22190121 taatgctaacaacactctcttttgaacaccctctctaatactcactcgtttattggtttaaatcattgcgggtctacactttgaaaattgaacccacaca 22190022  T
Q  175 aagtggtggg 184  Q
    ||||||||||    
T  22190021 aagtggtggg 22190012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 91 - 188
Target Start/End: Original strand, 6580016 - 6580113
Alignment:
Q  91 ctcttttgaacaccctctctaatactcactctcttattggtttaaattattgtgggtctacactttgaaaattgaacctacacaaagtggtgggacat 188  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| | | ||||||||||||||||||||||||| ||| |||||    
T  6580016 ctcttttgaacactctctctaatactcactctcttattggtttaaattattgtgggtccatattttgaaaattgaacctacacaaagtagtgagacat 6580113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 70; E-Value: 9e-32
Query Start/End: Original strand, 99 - 188
Target Start/End: Original strand, 12263458 - 12263547
Alignment:
Q  99 aacaccctctctaatactcactctcttattggtttaaattattgtgggtctacactttgaaaattgaacctacacaaagtggtgggacat 188  Q
    ||||| |||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||| ||||||||    
T  12263458 aacactctctctaatactcactatcttattggtttaaatcattgtgggtctacactttgaaaattgatcctacacaaagtgatgggacat 12263547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 70; E-Value: 9e-32
Query Start/End: Original strand, 78 - 188
Target Start/End: Complemental strand, 27949454 - 27949342
Alignment:
Q  78 aatgctagcaacactct--tttgaacaccctctctaatactcactctcttattggtttaaattattgtgggtctacactttgaaaattgaacctacacaa 175  Q
    |||||||||||||||||  ||||||||| |||||||||||||||||||||||| |||||||| |||||||||||||||||||||| ||||||  ||||||    
T  27949454 aatgctagcaacactctcttttgaacactctctctaatactcactctcttattagtttaaatcattgtgggtctacactttgaaatttgaactcacacaa 27949355  T
Q  176 agtggtgggacat 188  Q
    | |||| ||||||    
T  27949354 aatggtaggacat 27949342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 70; E-Value: 9e-32
Query Start/End: Original strand, 80 - 194
Target Start/End: Original strand, 48374440 - 48374556
Alignment:
Q  80 tgctagcaacactct--tttgaacaccctctctaatactcactctcttattggtttaaattattgtgggtctacactttgaaaattgaacctacacaaag 177  Q
    |||||||||||||||  ||||||||| ||||||||||||||||||||| |||||||||||||||||| || ||||||||| |||| ||||| | | ||||    
T  48374440 tgctagcaacactctcttttgaacactctctctaatactcactctcttgttggtttaaattattgtgagtatacactttggaaatagaacccatagaaag 48374539  T
Q  178 tggtgggacatgcatga 194  Q
    |||||||||||||||||    
T  48374540 tggtgggacatgcatga 48374556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 68; E-Value: 1e-30
Query Start/End: Original strand, 77 - 188
Target Start/End: Complemental strand, 14795311 - 14795200
Alignment:
Q  77 taatgctagcaacactcttttgaacaccctctctaatactcactctcttattggtttaaattattgtgggtctacactttgaaaattgaacctacacaaa 176  Q
    ||||||||||||||||||||||||||| |||||| ||||||||||||||||| |||||||| ||| ||| | |||||||| ||||||||||| ||| |||    
T  14795311 taatgctagcaacactcttttgaacactctctcttatactcactctcttattagtttaaatcattatggatatacactttaaaaattgaaccaacaaaaa 14795212  T
Q  177 gtggtgggacat 188  Q
     |||||||||||    
T  14795211 ttggtgggacat 14795200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 68; E-Value: 1e-30
Query Start/End: Original strand, 77 - 188
Target Start/End: Complemental strand, 15242303 - 15242192
Alignment:
Q  77 taatgctagcaacactcttttgaacaccctctctaatactcactctcttattggtttaaattattgtgggtctacactttgaaaattgaacctacacaaa 176  Q
    ||||||||||||||||||||||||||| |||||| ||||||||||||||||| |||||||| ||| ||| | |||||||| ||||||||||| ||| |||    
T  15242303 taatgctagcaacactcttttgaacactctctcttatactcactctcttattagtttaaatcattatggatatacactttaaaaattgaaccaacaaaaa 15242204  T
Q  177 gtggtgggacat 188  Q
     |||||||||||    
T  15242203 ttggtgggacat 15242192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 68; E-Value: 1e-30
Query Start/End: Original strand, 77 - 185
Target Start/End: Complemental strand, 46517473 - 46517363
Alignment:
Q  77 taatgctagcaacactct--tttgaacaccctctctaatactcactctcttattggtttaaattattgtgggtctacactttgaaaattgaacctacaca 174  Q
    ||||||||||||||||||  |||||||| ||||||||||||||| |||||||||||||||||| |||||| |||||||||||||||||||||||  ||||    
T  46517473 taatgctagcaacactctcttttgaacagcctctctaatactcattctcttattggtttaaatcattgtgagtctacactttgaaaattgaacccccaca 46517374  T
Q  175 aagtggtggga 185  Q
     | ||||||||    
T  46517373 gaatggtggga 46517363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 77 - 188
Target Start/End: Complemental strand, 11692361 - 11692248
Alignment:
Q  77 taatgctagcaacactct--tttgaacaccctctctaatactcactctcttattggtttaaattattgtgggtctacactttgaaaattgaacctacaca 174  Q
    |||| |||||||||||||  ||||||||| ||||||||||||||||||| |||| |||||||| | |||| || ||||||||||||||||||||||||||    
T  11692361 taatactagcaacactctcttttgaacacactctctaatactcactctcatattagtttaaatcactgtgagtttacactttgaaaattgaacctacaca 11692262  T
Q  175 aagtggtgggacat 188  Q
    ||||||| ||||||    
T  11692261 aagtggtaggacat 11692248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 77 - 179
Target Start/End: Original strand, 44350800 - 44350904
Alignment:
Q  77 taatgctagcaacactct--tttgaacaccctctctaatactcactctcttattggtttaaattattgtgggtctacactttgaaaattgaacctacaca 174  Q
    |||||||| |||||||||  |||||||||| ||||||||||||||||| || ||||||||||| |||||| ||||||||||||||||||||||||| |||    
T  44350800 taatgctaacaacactctcttttgaacaccatctctaatactcactcttttgttggtttaaatcattgtgagtctacactttgaaaattgaacctaaaca 44350899  T
Q  175 aagtg 179  Q
    |||||    
T  44350900 aagtg 44350904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 77 - 188
Target Start/End: Complemental strand, 11824251 - 11824140
Alignment:
Q  77 taatgctagcaacactct--tttgaacaccctctctaatactcactctcttattggtttaaattattgtgggtctacactttgaaaattgaacctacaca 174  Q
    |||||||| |||||||||  |||||||||  ||||||||||||||| |||||||| ||||||| ||||||||| |||||||||||||||||| |||||||    
T  11824251 taatgctaacaacactctcttttgaacac--tctctaatactcactttcttattgatttaaatcattgtgggtttacactttgaaaattgaagctacaca 11824154  T
Q  175 aagtggtgggacat 188  Q
    || |||||||||||    
T  11824153 aaatggtgggacat 11824140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 91 - 182
Target Start/End: Complemental strand, 39254249 - 39254158
Alignment:
Q  91 ctcttttgaacaccctctctaatactcactctcttattggtttaaattattgtgggtctacactttgaaaattgaacctacacaaagtggtg 182  Q
    ||||||||||||| |||| ||| |||||||||||||||| |||||||||||||||||||||| ||| ||||||||||| |||||||||||||    
T  39254249 ctcttttgaacactctctttaacactcactctcttattgatttaaattattgtgggtctacattttaaaaattgaaccaacacaaagtggtg 39254158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 77 - 188
Target Start/End: Complemental strand, 6442347 - 6442234
Alignment:
Q  77 taatgctagcaacact--cttttgaacaccctctctaatactcactctcttattggtttaaattattgtgggtctacactttgaaaattgaacctacaca 174  Q
    ||||| ||||||||||  |||||||||||  ||| ||||||||||||| |||||||||||||| |||||||||||||||||||||||||||| |  ||||    
T  6442347 taatgttagcaacactttcttttgaacactatctttaatactcactcttttattggtttaaatcattgtgggtctacactttgaaaattgaatccccaca 6442248  T
Q  175 aagtggtgggacat 188  Q
    || |||||| ||||    
T  6442247 aaatggtggaacat 6442234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 91 - 185
Target Start/End: Complemental strand, 27320540 - 27320446
Alignment:
Q  91 ctcttttgaacaccctctctaatactcactctcttattggtttaaattattgtgggtctacactttgaaaattgaacctacacaaagtggtggga 185  Q
    |||||||||| || ||||||| |||||||| |||||||  ||||||| |||||||||||||||||| ||||||||||||||||||| ||||||||    
T  27320540 ctcttttgaatactctctctactactcactttcttattcatttaaataattgtgggtctacactttaaaaattgaacctacacaaaatggtggga 27320446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 77 - 181
Target Start/End: Original strand, 25686833 - 25686939
Alignment:
Q  77 taatgctagcaacactct--tttgaacaccctctctaatactcactctcttattggtttaaattattgtgggtctacactttgaaaattgaacctacaca 174  Q
    ||||| ||||||||||||  ||||||||  || ||||||||||| | |||||||||||||||| |||||||||||||||||||||||||||||| | | |    
T  25686833 taatgttagcaacactctcttttgaacattctttctaatactcattatcttattggtttaaatcattgtgggtctacactttgaaaattgaacccataaa 25686932  T
Q  175 aagtggt 181  Q
    |||||||    
T  25686933 aagtggt 25686939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 77 - 188
Target Start/End: Complemental strand, 7775181 - 7775069
Alignment:
Q  77 taatgctagcaaca--ctcttttgaacaccctctctaatactcactctcttattggtttaaattattgtgggtctacactttgaaaattgaacctacaca 174  Q
    |||||||| |||||  ||||||||||||| |||||||||| |||||| |||||| |||||||| ||| ||| || ||||||||||||||||||  |||||    
T  7775181 taatgctaacaacattctcttttgaacactctctctaatattcactcacttatttgtttaaatcattctgg-tccacactttgaaaattgaactcacaca 7775083  T
Q  175 aagtggtgggacat 188  Q
    ||||||||||||||    
T  7775082 aagtggtgggacat 7775069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 92 - 188
Target Start/End: Complemental strand, 32205241 - 32205145
Alignment:
Q  92 tcttttgaacaccctctctaatactcactctcttattggtttaaattattgtgggtctacactttgaaaattgaacctacacaaagtggtgggacat 188  Q
    ||||||||||| ||||||||||||||||||||||||| |||||||| ||||| |  ||| ||||| ||||||||||| ||||||| |||| ||||||    
T  32205241 tcttttgaacatcctctctaatactcactctcttattagtttaaatcattgtagacctatactttaaaaattgaacccacacaaaatggtaggacat 32205145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 117 - 188
Target Start/End: Original strand, 31502504 - 31502575
Alignment:
Q  117 cactctcttattggtttaaattattgtgggtctacactttgaaaattgaacctacacaaagtggtgggacat 188  Q
    ||||||||||||||||||||| |||||| ||||||||||||||||||||||  ||||||| |||||||||||    
T  31502504 cactctcttattggtttaaatcattgtgagtctacactttgaaaattgaacgcacacaaaatggtgggacat 31502575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 91 - 188
Target Start/End: Complemental strand, 33008267 - 33008173
Alignment:
Q  91 ctcttttgaacaccctctctaatactcactctcttattggtttaaattattgtgggtctacactttgaaaattgaacctacacaaagtggtgggacat 188  Q
    ||||||||||||| ||   |||||||| |||| |||||||||||||| ||||||||||||||| ||| |||| ||||| |||||||||||||||||||    
T  33008267 ctcttttgaacactct---taatactctctcttttattggtttaaatcattgtgggtctacacattggaaatagaacccacacaaagtggtgggacat 33008173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 81 - 188
Target Start/End: Original strand, 32212872 - 32212980
Alignment:
Q  81 gctagcaacactct--tttgaacaccctctctaatactcactctcttattggtttaaattattgtgggtctacactttgaaaattgaacctacacaaagt 178  Q
    ||||||||||||||  |||||||||||| | |||||||||||||||||||||||||||| |||||||| ||||| ||| ||||||||||  | |||||||    
T  32212872 gctagcaacactctcttttgaacaccctatataatactcactctcttattggtttaaatcattgtggg-ctacattttaaaaattgaacacatacaaagt 32212970  T
Q  179 ggtgggacat 188  Q
     ||| |||||    
T  32212971 agtgagacat 32212980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 77 - 183
Target Start/End: Complemental strand, 7459525 - 7459417
Alignment:
Q  77 taatgctagcaacactctt--ttgaacaccctctctaatactcactctcttattggtttaaattattgtgggtctacactttgaaaattgaacctacaca 174  Q
    |||||||||||||||| ||  ||||| || |||| ||||||||||||| |||||||||||||||||||||| |||| | |||||||||||| |  ||| |    
T  7459525 taatgctagcaacacttttatttgaatactctctttaatactcactcttttattggtttaaattattgtggatctatattttgaaaattgagctcacata 7459426  T
Q  175 aagtggtgg 183  Q
    |||||||||    
T  7459425 aagtggtgg 7459417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 79 - 162
Target Start/End: Original strand, 19422838 - 19422919
Alignment:
Q  79 atgctagcaacactcttttgaacaccctctctaatactcactctcttattggtttaaattattgtgggtctacactttgaaaat 162  Q
    ||||||||||||||  |||||||||  ||||| ||||||||||| |||||||||||||| ||||||| ||||||||| ||||||    
T  19422838 atgctagcaacact--tttgaacactatctctgatactcactcttttattggtttaaatcattgtggatctacacttcgaaaat 19422919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 122 - 182
Target Start/End: Original strand, 36845567 - 36845627
Alignment:
Q  122 tcttattggtttaaattattgtgggtctacactttgaaaattgaacctacacaaagtggtg 182  Q
    |||||||||||||||| |||||||||||| ||||||||||||||||| ||||||| |||||    
T  36845567 tcttattggtttaaatcattgtgggtctatactttgaaaattgaacccacacaaattggtg 36845627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 105 - 188
Target Start/End: Original strand, 31731283 - 31731366
Alignment:
Q  105 ctctctaatactcactctcttattggtttaaattattgtgggtctacactttgaaaattgaacctacacaaagtggtgggacat 188  Q
    |||||||||||||| | ||||||||||||||||||| | ||||||| | |||| |||| |||| ||||||||||||||| ||||    
T  31731283 ctctctaatactcattttcttattggtttaaattatcgcgggtctatattttggaaatagaacatacacaaagtggtggaacat 31731366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 92 - 158
Target Start/End: Complemental strand, 7775009 - 7774944
Alignment:
Q  92 tcttttgaacaccctctctaatactcactctcttattggtttaaattattgtgggtctacactttga 158  Q
    |||||||||||| |||||||||| | |||||||||||||||||||| ||||| |||| |||||||||    
T  7775009 tcttttgaacactctctctaatatttactctcttattggtttaaatcattgt-ggtccacactttga 7774944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 96 - 166
Target Start/End: Original strand, 32178823 - 32178893
Alignment:
Q  96 ttgaacaccctctctaatactcactctcttattggtttaaattattgtgggtctacactttgaaaattgaa 166  Q
    |||||||  |||||| ||| |||||||||||||| ||||||| |||||| || ||||||||||||||||||    
T  32178823 ttgaacaatctctctgataatcactctcttattgatttaaatcattgtgtgtatacactttgaaaattgaa 32178893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 91 - 188
Target Start/End: Original strand, 10933979 - 10934076
Alignment:
Q  91 ctcttttgaacaccctctctaatactcactctcttattggtttaaattattgtgggtctacactttgaaaattgaacctacacaaagtggtgggacat 188  Q
    ||||||||||| | || | ||||||||| ||||||||| |||||||| ||||||||| || |||||| |||| ||| | | ||||||||||| |||||    
T  10933979 ctcttttgaacgctctttttaatactcaatctcttattagtttaaatcattgtgggtttatactttggaaatagaaaccatacaaagtggtgagacat 10934076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 99 - 156
Target Start/End: Complemental strand, 31874174 - 31874117
Alignment:
Q  99 aacaccctctctaatactcactctcttattggtttaaattattgtgggtctacacttt 156  Q
    ||||| ||||| ||||||||||||||||| ||||||||| |||||| |||||||||||    
T  31874174 aacactctctcgaatactcactctcttataggtttaaatcattgtgagtctacacttt 31874117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 80 - 188
Target Start/End: Original strand, 24539123 - 24539234
Alignment:
Q  80 tgctagcaacactct--tttgaacaccctctctaatactcactctcttattggtttaaattattgtgggtc-tacactttgaaaattgaacctacacaaa 176  Q
    |||||||||||||||  |||| |||| |||||||| ||||||||||| ||||| |||||| | |||||||| |||| |||| |||| ||| | | | |||    
T  24539123 tgctagcaacactctcttttggacactctctctaacactcactctctcattgggttaaatcaatgtgggtcatacattttggaaatggaatccatataaa 24539222  T
Q  177 gtggtgggacat 188  Q
    ||||||||||||    
T  24539223 gtggtgggacat 24539234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 124 - 188
Target Start/End: Original strand, 25092708 - 25092772
Alignment:
Q  124 ttattggtttaaattattgtgggtctacactttgaaaattgaacctacacaaagtggtgggacat 188  Q
    ||||||||||||||||||||| ||||| |||| |||||||||||  ||||||||| || ||||||    
T  25092708 ttattggtttaaattattgtgtgtctatacttagaaaattgaactcacacaaagtagtaggacat 25092772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 83 - 152
Target Start/End: Original strand, 36845495 - 36845566
Alignment:
Q  83 tagcaacactct--tttgaacaccctctctaatactcactctcttattggtttaaattattgtgggtctaca 152  Q
    ||||||||||||  |||||| || ||||  |||| |||||||||||||||||||||| ||||||||||||||    
T  36845495 tagcaacactctattttgaatactctctagaatattcactctcttattggtttaaatcattgtgggtctaca 36845566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 99 - 149
Target Start/End: Complemental strand, 12167365 - 12167315
Alignment:
Q  99 aacaccctctctaatactcactctcttattggtttaaattattgtgggtct 149  Q
    ||||| |||| ||||||||||| |||||||||||||||| |||||||||||    
T  12167365 aacactctctttaatactcactttcttattggtttaaatcattgtgggtct 12167315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 78 - 188
Target Start/End: Complemental strand, 13919962 - 13919849
Alignment:
Q  78 aatgctagcaacactct--tttgaacaccctctctaatactcactctcttattggtttaaattattgtgggtc-tacactttgaaaattgaacctacaca 174  Q
    |||||||||||||||||  ||||| ||| |||||||  ||||||||  ||||||| | |||| | ||| || | |||||||||||||| ||||| ||| |    
T  13919962 aatgctagcaacactctcttttgagcactctctctagcactcactcatttattgggtgaaatcaatgtaggacctacactttgaaaatggaacccacata 13919863  T
Q  175 aagtggtgggacat 188  Q
    ||||||||||||||    
T  13919862 aagtggtgggacat 13919849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 118 - 188
Target Start/End: Original strand, 23564076 - 23564146
Alignment:
Q  118 actctcttattggtttaaattattgtgggtctacactttgaaaattgaacctacacaaagtggtgggacat 188  Q
    ||||| ||||||||||||||||  |||| |||||||||||||||| ||||  | ||||||||||| |||||    
T  23564076 actcttttattggtttaaattacagtggatctacactttgaaaatagaactcatacaaagtggtgcgacat 23564146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 77 - 182
Target Start/End: Complemental strand, 31759943 - 31759838
Alignment:
Q  77 taatgctagcaacactcttttgaacaccctctctaatactcactctcttattggtttaaattattgtgggtctacactttgaaaattgaacctacacaaa 176  Q
    ||||||||||||||| || ||  | || |||||||||||||| | ||||||||| |||||| |||| | ||||| |||||  ||||||||   |||||||    
T  31759943 taatgctagcaacaccctcttttaaacactctctaatactcattttcttattggcttaaatcattgcgagtctatactttataaattgaagtcacacaaa 31759844  T
Q  177 gtggtg 182  Q
    ||||||    
T  31759843 gtggtg 31759838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 80 - 188
Target Start/End: Complemental strand, 17749874 - 17749763
Alignment:
Q  80 tgctagcaacactct--tttgaacaccctctctaatactcactctcttattggtttaaattattgtgggtc-tacactttgaaaattgaacctacacaaa 176  Q
    |||||||||||||||  |||| |||| |||||||| ||||||||||| ||||| |||||| | |||||||| |||| |||| ||||  || | | | |||    
T  17749874 tgctagcaacactctcttttggacactctctctaacactcactctctcattgggttaaatcaatgtgggtcatacattttggaaatgaaatccatataaa 17749775  T
Q  177 gtggtgggacat 188  Q
    ||||||||||||    
T  17749774 gtggtgggacat 17749763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 80 - 188
Target Start/End: Complemental strand, 45909636 - 45909525
Alignment:
Q  80 tgctagcaacactct--tttgaacaccctctctaatactcactctcttattggtttaaattattgtgggtc-tacactttgaaaattgaacctacacaaa 176  Q
    |||||||||||||||  |||||| || |||||||| ||||||||| ||||||| | |||| | ||| || | |||| |||| |||| ||||| ||| |||    
T  45909636 tgctagcaacactctcttttgaatactctctctaacactcactcttttattgggtaaaatcaatgtaggacctacaatttggaaatggaacccacataaa 45909537  T
Q  177 gtggtgggacat 188  Q
    ||||||||||||    
T  45909536 gtggtgggacat 45909525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 93 - 156
Target Start/End: Complemental strand, 31628163 - 31628100
Alignment:
Q  93 cttttgaacaccctctctaatactcactctcttattggtttaaattattgtgggtctacacttt 156  Q
    |||||||||||  ||| ||||||| |||||||||||||||||||| || || |||| |||||||    
T  31628163 cttttgaacactatctttaatacttactctcttattggtttaaatcatcgtaggtcaacacttt 31628100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 91 - 178
Target Start/End: Complemental strand, 32605497 - 32605410
Alignment:
Q  91 ctcttttgaacaccctctctaatactcactctcttattggtttaaattattgtgggtctacactttgaaaattgaacctacacaaagt 178  Q
    |||||||||||| | ||| ||||| | || ||||||||  ||||||| |||||| | ||||||||| ||||||||| | |||||||||    
T  32605497 ctcttttgaacaacttctttaatatttaccctcttattaatttaaatcattgtgagcctacactttaaaaattgaatccacacaaagt 32605410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 118 - 168
Target Start/End: Original strand, 3855851 - 3855901
Alignment:
Q  118 actctcttattggtttaaattattgtgggtctacactttgaaaattgaacc 168  Q
    ||||| |||||||||||||| ||||| |||||  |||||||||||||||||    
T  3855851 actcttttattggtttaaatcattgtaggtctgaactttgaaaattgaacc 3855901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 122 - 188
Target Start/End: Complemental strand, 9649059 - 9648993
Alignment:
Q  122 tcttattggtttaaattattgtgggtctacactttgaaaattgaacctacacaaagtggtgggacat 188  Q
    |||||||||||||||| ||||||||| ||||| ||| |||  |||||  ||||||||||||| ||||    
T  9649059 tcttattggtttaaatcattgtgggtatacacattggaaacagaacccgcacaaagtggtggaacat 9648993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 78 - 188
Target Start/End: Complemental strand, 14759825 - 14759712
Alignment:
Q  78 aatgctagcaacactct--tttgaacaccctctctaatactcactctcttattggtttaaattattgtgggtc-tacactttgaaaattgaacctacaca 174  Q
    |||||||||||||||||  ||||| ||| ||| |||  || |||||| ||||||| | |||||| ||| || | ||||||||| |||| ||||||||  |    
T  14759825 aatgctagcaacactctcttttgagcactctccctagcacccactcttttattggatgaaattaatgtaggacctacactttggaaatagaacctaccta 14759726  T
Q  175 aagtggtgggacat 188  Q
    ||||||||||||||    
T  14759725 aagtggtgggacat 14759712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 106 - 143
Target Start/End: Complemental strand, 1316424 - 1316387
Alignment:
Q  106 tctctaatactcactctcttattggtttaaattattgt 143  Q
    ||||||||||||||||| |||||||||||||| |||||    
T  1316424 tctctaatactcactcttttattggtttaaatcattgt 1316387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 147 - 188
Target Start/End: Complemental strand, 12271095 - 12271055
Alignment:
Q  147 tctacactttgaaaattgaacctacacaaagtggtgggacat 188  Q
    |||||||||||||||| ||||| |||||||||||||||||||    
T  12271095 tctacactttgaaaatagaacc-acacaaagtggtgggacat 12271055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 147 - 188
Target Start/End: Original strand, 19494409 - 19494450
Alignment:
Q  147 tctacactttgaaaattgaacctacacaaagtggtgggacat 188  Q
    |||||||||||||||| ||||| ||| |||||||||||||||    
T  19494409 tctacactttgaaaatggaacccacataaagtggtgggacat 19494450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 156 - 188
Target Start/End: Original strand, 8073367 - 8073399
Alignment:
Q  156 tgaaaattgaacctacacaaagtggtgggacat 188  Q
    |||||||||||| ||||||||||||||||||||    
T  8073367 tgaaaattgaacttacacaaagtggtgggacat 8073399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 78 - 130
Target Start/End: Complemental strand, 26703617 - 26703565
Alignment:
Q  78 aatgctagcaacactcttttgaacaccctctctaatactcactctcttattgg 130  Q
    |||||||||||||||||||||| ||  |||||||  ||||||||| |||||||    
T  26703617 aatgctagcaacactcttttgagcattctctctagcactcactcttttattgg 26703565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 111 - 163
Target Start/End: Original strand, 27248480 - 27248532
Alignment:
Q  111 aatactcactctcttattggtttaaattattgtgggtctacactttgaaaatt 163  Q
    |||| ||| ||||||||| |||||||||  |||||||||||| ||||||||||    
T  27248480 aatattcattctcttatttgtttaaattgatgtgggtctacattttgaaaatt 27248532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 76; Significance: 2e-35; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 76; E-Value: 2e-35
Query Start/End: Original strand, 80 - 188
Target Start/End: Complemental strand, 27991 - 27881
Alignment:
Q  80 tgctagcaacac--tcttttgaacaccctctctaatactcactctcttattggtttaaattattgtgggtctacactttgaaaattgaacctacacaaag 177  Q
    ||||||||||||  |||||||||||| |||| |||||||||||||||||||||||||||| ||||||||||||||||||| |||| ||||| ||||||||    
T  27991 tgctagcaacaccctcttttgaacactctctttaatactcactctcttattggtttaaatcattgtgggtctacactttggaaatagaacccacacaaag 27892  T
Q  178 tggtgggacat 188  Q
    |||||||||||    
T  27891 tggtgggacat 27881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 73; Significance: 2e-33; HSPs: 35)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 79 - 188
Target Start/End: Complemental strand, 9470260 - 9470150
Alignment:
Q  79 atgctagcaacactctttt--gaacaccctctctaatactcactctcttattggtttaaattattgtgggtctacactttgaaaattgaacctacacaaa 176  Q
    |||||||||||||||| ||  ||| ||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||| | |||||    
T  9470260 atgctagcaacactctcttctgaa-accctctctaatattcactctcttattggtttaaatcattgtgggtctacactttgaaaattgaacccaaacaaa 9470162  T
Q  177 gtggtgggacat 188  Q
    ||||||||||||    
T  9470161 gtggtgggacat 9470150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 80 - 188
Target Start/End: Complemental strand, 10981695 - 10981587
Alignment:
Q  80 tgctagcaacactcttttgaacaccctctctaatactcactctcttattggtttaaattattgtgggtctacactttgaaaattgaacctacacaaagtg 179  Q
    ||||||||||||||| | |||||| | ||||||||||||||||||||||||||||||| ||||||||||||||| ||| |||| ||||| ||||||||||    
T  10981695 tgctagcaacactctctagaacactccctctaatactcactctcttattggtttaaatcattgtgggtctacacattggaaatagaacccacacaaagtg 10981596  T
Q  180 gtgggacat 188  Q
    |||||||||    
T  10981595 gtgggacat 10981587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 77 - 188
Target Start/End: Original strand, 26767759 - 26767872
Alignment:
Q  77 taatgctagcaacact--cttttgaacaccctctctaatactcactctcttattggtttaaattattgtgggtctacactttgaaaattgaacctacaca 174  Q
    ||||||||||||||||  ||||||||||| || ||||||||||||||| |||||||||||||| |||||| ||||||| |||||||||||||||  ||||    
T  26767759 taatgctagcaacactttcttttgaacactctatctaatactcactcttttattggtttaaatcattgtgagtctacaatttgaaaattgaaccctcaca 26767858  T
Q  175 aagtggtgggacat 188  Q
    ||||||||||||||    
T  26767859 aagtggtgggacat 26767872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 70; E-Value: 9e-32
Query Start/End: Original strand, 91 - 188
Target Start/End: Complemental strand, 38464329 - 38464232
Alignment:
Q  91 ctcttttgaacaccctctctaatactcactctcttattggtttaaattattgtgggtctacactttgaaaattgaacctacacaaagtggtgggacat 188  Q
    ||||||||||||| |||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||| || ||||||| || |||||    
T  38464329 ctcttttgaacactctctctaatacttactctcttattggtttaaatcattgtgggtctacactttgaaaattgaacccacgcaaagtgatgagacat 38464232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 68; E-Value: 1e-30
Query Start/End: Original strand, 80 - 188
Target Start/End: Complemental strand, 12989370 - 12989260
Alignment:
Q  80 tgctagcaacactct--tttgaacaccctctctaatactcactctcttattggtttaaattattgtgggtctacactttgaaaattgaacctacacaaag 177  Q
    |||||||||||||||  ||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||| | |||| ||| | | ||||||    
T  12989370 tgctagcaacactctcttttgaacactctctctaatactcactctcttattggtttaaatcattgtgggtctacacttcggaaatagaatccatacaaag 12989271  T
Q  178 tggtgggacat 188  Q
    |||||||||||    
T  12989270 tggtgggacat 12989260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 91 - 188
Target Start/End: Complemental strand, 15884595 - 15884498
Alignment:
Q  91 ctcttttgaacaccctctctaatactcactctcttattggtttaaattattgtgggtctacactttgaaaattgaacctacacaaagtggtgggacat 188  Q
    ||||||||| |||  ||||||||||||| | |||||||||||||||| |||||||||||||| ||||||||||||||| |||||||||||||||||||    
T  15884595 ctcttttgaccacaatctctaatactcattatcttattggtttaaataattgtgggtctacattttgaaaattgaacccacacaaagtggtgggacat 15884498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 77 - 181
Target Start/End: Original strand, 6980118 - 6980224
Alignment:
Q  77 taatgctagcaacactct--tttgaacaccctctctaatactcactctcttattggtttaaattattgtgggtctacactttgaaaattgaacctacaca 174  Q
    ||||||| ||||||||||  |||||||||  ||||||||||||||||||||||| ||| |||| |||||||||||| ||||||||||||||||  |||||    
T  6980118 taatgcttgcaacactctcttttgaacactttctctaatactcactctcttattagttgaaatcattgtgggtctatactttgaaaattgaactcacaca 6980217  T
Q  175 aagtggt 181  Q
    |||||||    
T  6980218 aagtggt 6980224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 78 - 182
Target Start/End: Original strand, 32856134 - 32856240
Alignment:
Q  78 aatgctagcaacactct--tttgaacaccctctctaatactcactctcttattggtttaaattattgtgggtctacactttgaaaattgaacctacacaa 175  Q
    |||| ||||||||||||  |||||||||||| ||||||||||| |||||||||||||||||| | | ||| ||||||||||||||||| |||| ||||||    
T  32856134 aatgttagcaacactctattttgaacaccctttctaatactcaatctcttattggtttaaatcactatggatctacactttgaaaattcaacccacacaa 32856233  T
Q  176 agtggtg 182  Q
    |||||||    
T  32856234 agtggtg 32856240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 105 - 188
Target Start/End: Complemental strand, 44274386 - 44274303
Alignment:
Q  105 ctctctaatactcactctcttattggtttaaattattgtgggtctacactttgaaaattgaacctacacaaagtggtgggacat 188  Q
    |||||||| ||||||||| |||||||||||||| ||||||| |||||||||||||| ||||||| |||||||||||||||||||    
T  44274386 ctctctaacactcactctgttattggtttaaatcattgtggatctacactttgaaagttgaacccacacaaagtggtgggacat 44274303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 118 - 188
Target Start/End: Original strand, 7919311 - 7919381
Alignment:
Q  118 actctcttattggtttaaattattgtgggtctacactttgaaaattgaacctacacaaagtggtgggacat 188  Q
    |||||||||||||||||||| ||||||| |||||||||||||||||||| | |||||||||||||||||||    
T  7919311 actctcttattggtttaaatcattgtggatctacactttgaaaattgaatccacacaaagtggtgggacat 7919381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 91 - 164
Target Start/End: Complemental strand, 45554725 - 45554652
Alignment:
Q  91 ctcttttgaacaccctctctaatactcactctcttattggtttaaattattgtgggtctacactttgaaaattg 164  Q
    ||||||||||||  |||||||||||||||| |||||||||||||||| ||||||||||||||||| ||||||||    
T  45554725 ctcttttgaacattctctctaatactcactttcttattggtttaaatcattgtgggtctacacttggaaaattg 45554652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 110 - 194
Target Start/End: Original strand, 34142172 - 34142256
Alignment:
Q  110 taatactcactctcttattggtttaaattattgtgggtctacactttgaaaattgaacctacacaaagtggtgggacatgcatga 194  Q
    ||||| |||||||||||||||||||||  ||||||  |||||||||||||||||||||| ||||||||| ||| ||||| |||||    
T  34142172 taatattcactctcttattggtttaaaccattgtgactctacactttgaaaattgaacccacacaaagtagtgagacatacatga 34142256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 92 - 167
Target Start/End: Complemental strand, 19639258 - 19639183
Alignment:
Q  92 tcttttgaacaccctctctaatactcactctcttattggtttaaattattgtgggtctacactttgaaaattgaac 167  Q
    ||||||||| | ||||| ||||| |||||||||||||||||||||| ||||| ||||| |||||||||||||||||    
T  19639258 tcttttgaatagcctctataatattcactctcttattggtttaaatcattgtaggtctgcactttgaaaattgaac 19639183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 92 - 167
Target Start/End: Complemental strand, 19837851 - 19837776
Alignment:
Q  92 tcttttgaacaccctctctaatactcactctcttattggtttaaattattgtgggtctacactttgaaaattgaac 167  Q
    ||||||||| | ||||| ||||| |||||||||||||||||||||| ||||| ||||| |||||||||||||||||    
T  19837851 tcttttgaatagcctctataatattcactctcttattggtttaaatcattgtaggtctgcactttgaaaattgaac 19837776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 91 - 188
Target Start/End: Complemental strand, 11539592 - 11539494
Alignment:
Q  91 ctcttttgaacaccctctctaatactcactctcttattggtttaaat-tattgtgggtctacactttgaaaattgaacctacacaaagtggtgggacat 188  Q
    |||||||  |||| |||||||||||||||||||||||||||||||||  ||| ||| |||||||||||||||| ||||  |||||||||| ||| ||||    
T  11539592 ctcttttacacactctctctaatactcactctcttattggtttaaatcaattctggatctacactttgaaaatagaactcacacaaagtgatggaacat 11539494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 77 - 188
Target Start/End: Original strand, 35316399 - 35316512
Alignment:
Q  77 taatgctagcaacactct--tttgaacaccctctctaatactcactctcttattggtttaaattattgtgggtctacactttgaaaattgaacctacaca 174  Q
    ||||||||| ||||||||  ||||| ||| || | | |||||||||||||||||| ||||||| |||||||||||||| ||| ||||||||| | ||| |    
T  35316399 taatgctagtaacactctcttttgagcactctttatgatactcactctcttattgatttaaatcattgtgggtctacaatttaaaaattgaatcaacata 35316498  T
Q  175 aagtggtgggacat 188  Q
    || |||||||||||    
T  35316499 aaatggtgggacat 35316512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 77 - 188
Target Start/End: Original strand, 36471836 - 36471949
Alignment:
Q  77 taatgctagcaacactc--ttttgaacaccctctctaatactcactctcttattggtttaaattattgtgggtctacactttgaaaattgaacctacaca 174  Q
    |||||||||||| ||||  |||| || || |||||||||||||||||| |||||||||||||| |||||| || |||| ||||||||||||| | | | |    
T  36471836 taatgctagcaaaactccttttttaagactctctctaatactcactcttttattggtttaaatcattgtgagtttacattttgaaaattgaatccataaa 36471935  T
Q  175 aagtggtgggacat 188  Q
    |||||||| |||||    
T  36471936 aagtggtgagacat 36471949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 82 - 162
Target Start/End: Original strand, 4552843 - 4552925
Alignment:
Q  82 ctagcaacactc--ttttgaacaccctctctaatactcactctcttattggtttaaattattgtgggtctacactttgaaaat 162  Q
    ||||||||||||  |||||||||   | ||| |||||||||||||||||||||||||| ||||||||||||||| ||||||||    
T  4552843 ctagcaacactcacttttgaacattttttctgatactcactctcttattggtttaaatcattgtgggtctacacattgaaaat 4552925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 92 - 178
Target Start/End: Original strand, 472178 - 472264
Alignment:
Q  92 tcttttgaacaccctctctaatactcactctcttattggtttaaattattgtgggtctacactttgaaaattgaacctacacaaagt 178  Q
    |||||||| ||| |||| |||||||| ||||||||||||||||||| ||||||| | || | ||||||||||||||  |||||||||    
T  472178 tcttttgagcactctctttaatactcgctctcttattggtttaaatcattgtggatatatattttgaaaattgaactcacacaaagt 472264  T

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Target: chr2; HSP #20
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 106 - 164
Target Start/End: Original strand, 14489568 - 14489626
Alignment:
Q  106 tctctaatactcactctcttattggtttaaattattgtgggtctacactttgaaaattg 164  Q
    ||||||||||||| ||| |||||||||||||||||||||| |||||||||| |||||||    
T  14489568 tctctaatactcattcttttattggtttaaattattgtggatctacactttaaaaattg 14489626  T

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Target: chr2; HSP #21
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 91 - 162
Target Start/End: Original strand, 30718341 - 30718412
Alignment:
Q  91 ctcttttgaacaccctctctaatactcactctcttattggtttaaattattgtgggtctacactttgaaaat 162  Q
    |||||||  |||| |||||||||| ||||| | |||||||||||||| |||||| |||||||||||||||||    
T  30718341 ctcttttagacactctctctaatattcacttttttattggtttaaatcattgtgagtctacactttgaaaat 30718412  T

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Target: chr2; HSP #22
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 110 - 184
Target Start/End: Complemental strand, 3804732 - 3804658
Alignment:
Q  110 taatactcactctcttattggtttaaattattgtgggtctacactttgaaaattgaacctacacaaagtggtggg 184  Q
    ||||||| ||| | |||||  ||||||||||||||||| ||||||||||||||| |||||||| |||||| ||||    
T  3804732 taatacttactattttattaatttaaattattgtgggtgtacactttgaaaattaaacctacataaagtgatggg 3804658  T

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Target: chr2; HSP #23
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 77 - 180
Target Start/End: Original strand, 12098866 - 12098970
Alignment:
Q  77 taatgctagcaacactct-tttgaacaccctctctaatactcactctcttattggtttaaatta-ttgtgggtctacactttgaaaattgaacctacaca 174  Q
    |||||||||||||| ||| |||| | || |||| ||||||||||||||||||| |||||||| | ||||| || |||||||||||||||||||  | |||    
T  12098866 taatgctagcaacattctatttgga-acactctttaatactcactctcttattagtttaaatcatttgtgagtttacactttgaaaattgaactcataca 12098964  T
Q  175 aagtgg 180  Q
    ||||||    
T  12098965 aagtgg 12098970  T

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Target: chr2; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 91 - 168
Target Start/End: Original strand, 25238291 - 25238368
Alignment:
Q  91 ctcttttgaacaccctctctaatactcactctcttattggtttaaattattgtgggtctacactttgaaaattgaacc 168  Q
    ||||||| |||||  ||||||  ||||||| | |||||||||||||| ||||||| |||||||||||||||| |||||    
T  25238291 ctcttttaaacactttctctagcactcacttttttattggtttaaatcattgtggatctacactttgaaaatagaacc 25238368  T

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Target: chr2; HSP #25
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 106 - 183
Target Start/End: Original strand, 27494480 - 27494557
Alignment:
Q  106 tctctaatactcactctcttattggtttaaattattgtgggtctacactttgaaaattgaacctacacaaagtggtgg 183  Q
    ||||||||||||||||| |||||| ||||||| |||| |||||||  ||||||||| |||||||| | ||| ||||||    
T  27494480 tctctaatactcactcttttattgatttaaatcattgcgggtctatgctttgaaaagtgaacctatataaattggtgg 27494557  T

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Target: chr2; HSP #26
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 95 - 188
Target Start/End: Original strand, 37652263 - 37652356
Alignment:
Q  95 tttgaacaccctctctaatactcactctcttattggtttaaattattgtgggtctacactttgaaaattgaacctacacaaagtggtgggacat 188  Q
    ||||||||  |||||| ||| ||||| | |||||||||||||| ||||||  ||||||| ||| ||||||||| ||||||||| ||||| ||||    
T  37652263 tttgaacattctctcttatattcacttttttattggtttaaatcattgtgaatctacacgttggaaattgaacatacacaaaggggtggaacat 37652356  T

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Target: chr2; HSP #27
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 125 - 185
Target Start/End: Original strand, 16719478 - 16719538
Alignment:
Q  125 tattggtttaaattattgtgggtctacactttgaaaattgaacctacacaaagtggtggga 185  Q
    ||||||||||||| |||| ||||||||| |||||||||||||||||||  || ||||||||    
T  16719478 tattggtttaaatcattgcgggtctacattttgaaaattgaacctacatgaaatggtggga 16719538  T

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Target: chr2; HSP #28
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 99 - 153
Target Start/End: Original strand, 33678138 - 33678192
Alignment:
Q  99 aacaccctctctaatactcactctcttattggtttaaattattgtgggtctacac 153  Q
    ||||| |||||||||| ||||| | ||||||||||||||||||||| ||||||||    
T  33678138 aacacactctctaatattcacttttttattggtttaaattattgtgagtctacac 33678192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 123 - 188
Target Start/End: Original strand, 18511255 - 18511320
Alignment:
Q  123 cttattggtttaaattattgtgggtctacactttgaaaattgaacctacacaaagtggtgggacat 188  Q
    ||||||||||||||  ||||| ||||| |||||||||||||||||| ||| ||| | |||||||||    
T  18511255 cttattggtttaaaacattgtaggtcttcactttgaaaattgaacccacataaaatagtgggacat 18511320  T

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Target: chr2; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 105 - 162
Target Start/End: Complemental strand, 24497344 - 24497287
Alignment:
Q  105 ctctctaatactcactctcttattggtttaaattattgtgggtctacactttgaaaat 162  Q
    ||||||||||||||||||| |||| |||||||| | | | ||||||||||||||||||    
T  24497344 ctctctaatactcactctcctattagtttaaatcactcttggtctacactttgaaaat 24497287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 111 - 182
Target Start/End: Complemental strand, 17188211 - 17188140
Alignment:
Q  111 aatactcactctcttattggtttaaattattgtgggtctacactttgaaaattgaacctacacaaagtggtg 182  Q
    |||||||| | | |||||||||||||| ||| |||| ||||||||||||||||||    |||||||||||||    
T  17188211 aatactcattattttattggtttaaatcattctgggcctacactttgaaaattgagttcacacaaagtggtg 17188140  T

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Target: chr2; HSP #32
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 110 - 185
Target Start/End: Complemental strand, 32701617 - 32701542
Alignment:
Q  110 taatactcactctcttattggtttaaattattgtgggtctacactttgaaaattgaacctacacaaagtggtggga 185  Q
    ||||||| ||| | |||||||||||||| ||| ||| | ||||| || |||||||||| |||| ||||||||||||    
T  32701617 taatacttacttttttattggtttaaatcattatggatttacacgttaaaaattgaacatacataaagtggtggga 32701542  T

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Target: chr2; HSP #33
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 77 - 162
Target Start/End: Complemental strand, 43414536 - 43414450
Alignment:
Q  77 taatgctagcaacactct---tttgaacaccctctctaatactcactctcttattggtttaaattattgtgggtctacactttgaaaat 162  Q
    |||||||| |||||||||   |||||||||  || ||||||||||| ||||| ||||||||||| ||||||| |||| ||| |||||||    
T  43414536 taatgctatcaacactctctttttgaacac--tcactaatactcaccctcttcttggtttaaatcattgtggatctatactctgaaaat 43414450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 78 - 130
Target Start/End: Original strand, 10339769 - 10339821
Alignment:
Q  78 aatgctagcaacactcttttgaacaccctctctaatactcactctcttattgg 130  Q
    ||||||||||||| |||||||||||| |||||||  ||||||| | |||||||    
T  10339769 aatgctagcaacaatcttttgaacactctctctagcactcactattttattgg 10339821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 105 - 149
Target Start/End: Complemental strand, 17461018 - 17460974
Alignment:
Q  105 ctctctaatactcactctcttattggtttaaattattgtgggtct 149  Q
    |||||||||| |||||||||||||  |||||||||||||| ||||    
T  17461018 ctctctaatattcactctcttattaatttaaattattgtgtgtct 17460974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0204 (Bit Score: 49; Significance: 3e-19; HSPs: 1)
Name: scaffold0204
Description:

Target: scaffold0204; HSP #1
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 79 - 188
Target Start/End: Original strand, 26862 - 26973
Alignment:
Q  79 atgctagcaacactc--ttttgaacaccctctctaatactcactctcttattggtttaaattattgtgggtctacactttgaaaattgaacctacacaaa 176  Q
    |||||||||||||||  |||||| |||  ||||||| |  |||||| |||||||||||||  ||| ||||||||| |||||||||||||||| |||||||    
T  26862 atgctagcaacactcgtttttgagcactttctctaacatccactcttttattggtttaaagcattatgggtctacgctttgaaaattgaacccacacaaa 26961  T
Q  177 gtggtgggacat 188  Q
    ||||||| ||||    
T  26962 gtggtggaacat 26973  T

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Target: scaffold0543 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0543
Description:

Target: scaffold0543; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 120 - 185
Target Start/End: Complemental strand, 9801 - 9736
Alignment:
Q  120 tctcttattggtttaaattattgtgggtctacactttgaaaattgaacctacacaaagtggtggga 185  Q
    ||||||||| ||||||||||||||| ||||||||||| ||||||||||| ||||||| ||||||||    
T  9801 tctcttattcgtttaaattattgtgagtctacacttttaaaattgaacccacacaaaatggtggga 9736  T

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Target: scaffold0492 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0492
Description:

Target: scaffold0492; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 120 - 185
Target Start/End: Complemental strand, 11347 - 11282
Alignment:
Q  120 tctcttattggtttaaattattgtgggtctacactttgaaaattgaacctacacaaagtggtggga 185  Q
    ||||||||| ||||||||||||||| ||||||||||| ||||||||||| ||||||| ||||||||    
T  11347 tctcttattcgtttaaattattgtgagtctacacttttaaaattgaacccacacaaaatggtggga 11282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 77 - 188
Target Start/End: Original strand, 204706 - 204819
Alignment:
Q  77 taatgctagcaacactctttt--gaacaccctctctaatactcactctcttattggtttaaattattgtgggtctacactttgaaaattgaacctacaca 174  Q
    |||||||||||||||||||||  |||||  ||||||| |||||||||| ||||||||||| || |||||  ||||||| ||| |||||||| |  |||||    
T  204706 taatgctagcaacactcttttttgaacattctctctagtactcactcttttattggtttatataattgtaagtctacaatttaaaaattgatcagacaca 204805  T
Q  175 aagtggtgggacat 188  Q
    ||||| || |||||    
T  204806 aagtgatgagacat 204819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 77 - 132
Target Start/End: Original strand, 121199 - 121255
Alignment:
Q  77 taatgctagcaacactct-tttgaacaccctctctaatactcactctcttattggtt 132  Q
    |||||||||||||| ||| |||||| |  ||||||||||||||||||||||||||||    
T  121199 taatgctagcaacattctctttgaaaaatctctctaatactcactctcttattggtt 121255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0099 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0099
Description:

Target: scaffold0099; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 150 - 188
Target Start/End: Complemental strand, 27420 - 27382
Alignment:
Q  150 acactttgaaaattgaacctacacaaagtggtgggacat 188  Q
    ||||||||||||| ||||||||| |||||||||||||||    
T  27420 acactttgaaaatggaacctacataaagtggtgggacat 27382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0194 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0194
Description:

Target: scaffold0194; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 91 - 160
Target Start/End: Original strand, 8425 - 8494
Alignment:
Q  91 ctcttttgaacaccctctctaatactcactctcttattggtttaaattattgtgggtctacactttgaaa 160  Q
    |||||||||| || |||| ||||||| | ||| |||||||||||||| ||| || |||||||||| ||||    
T  8425 ctcttttgaatactctctttaatactaattcttttattggtttaaatcattatgagtctacacttcgaaa 8494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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