View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15401_high_32 (Length: 302)
Name: NF15401_high_32
Description: NF15401
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15401_high_32 |
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Alignment Details
Target: chr1 (Bit Score: 267; Significance: 1e-149; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 267; E-Value: 1e-149
Query Start/End: Original strand, 11 - 285
Target Start/End: Complemental strand, 10600101 - 10599827
Alignment:
| Q |
11 |
aagcaaaggcactgtgaatacaattgatgcaccaaaaagtgagggacaagaattgccaattaaggatggtacaagaacagggtcagacatttttgaaagt |
110 |
Q |
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|||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
10600101 |
aagcaaagacagtgtgaatacaattgatgcaccaaaaagtgagggacaagaattgccaattaaggatggtacaagaacagggtcagacatttttgaaagt |
10600002 |
T |
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| Q |
111 |
attgaggtcaatgttcctaaagacatgaaggttgctggaatgaatgtcaaaccatgagagcaagatcatagtacctttagacttaacatcatcaccaatt |
210 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
10600001 |
attgaggtcaatgttcctaaagacatgaaggttgctggaatgaatgtcaaaccatgagagcaagatcatagtacctttagacttaacatcatcaccaatt |
10599902 |
T |
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| Q |
211 |
ttcctacttaaatgaaatcaagagagattttgtgcacttgtactaatctttcccaatgcccttagggatgcattt |
285 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
10599901 |
ttcctacttaaatgaaatcaagagagattttgtgcacttgtactaatctttcccaatgcccttagggatgcattt |
10599827 |
T |
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