View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15401_high_40 (Length: 266)
Name: NF15401_high_40
Description: NF15401
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15401_high_40 |
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Alignment Details
Target: chr7 (Bit Score: 161; Significance: 6e-86; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 161; E-Value: 6e-86
Query Start/End: Original strand, 16 - 248
Target Start/End: Original strand, 24099987 - 24100218
Alignment:
| Q |
16 |
attagccaagcaaggcttaattttacggttcatgttatcatgttattttgatcagcaagactaatgttttcctataagtattgtgtttctaaatttgttc |
115 |
Q |
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| T |
24099987 |
attagccaagcaaggcttaattttacggttcat--------gttattttgatcagcaagactaatgttttcctataagtattgtgtttctaaatttgttc |
24100078 |
T |
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| Q |
116 |
aacatacataatcaaccaaacaatcattcgcacaatttatccatttattgttttgctttcctttacggtctatcaatttcttagcttagtgg-------a |
208 |
Q |
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||||||||||||||||||||||||| ||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||| |
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| T |
24100079 |
aacatacataatcaaccaaacaatcgttcgcgcaatttatccaattattgttttgctttcctttacggtctatcaatttcttagtttagtggttcaatat |
24100178 |
T |
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| Q |
209 |
taactcaaacattgtatctagcacaatttggagtagtcaa |
248 |
Q |
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||||||||||||||||||||||| |||||||||||||||| |
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| T |
24100179 |
taactcaaacattgtatctagcataatttggagtagtcaa |
24100218 |
T |
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