View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF15401_low_19 (Length: 487)

Name: NF15401_low_19
Description: NF15401
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF15401_low_19
NF15401_low_19
[»] chr5 (27 HSPs)
chr5 (18-469)||(9603475-9603923)
chr5 (24-129)||(2740273-2740378)
chr5 (19-127)||(16327902-16328010)
chr5 (24-128)||(33149634-33149738)
chr5 (23-128)||(35943887-35943992)
chr5 (24-128)||(28177775-28177879)
chr5 (24-128)||(35785199-35785303)
chr5 (24-130)||(18520880-18520986)
chr5 (25-130)||(13811650-13811755)
chr5 (24-128)||(26720516-26720620)
chr5 (24-128)||(26990265-26990369)
chr5 (24-130)||(36732938-36733044)
chr5 (24-105)||(39557513-39557594)
chr5 (28-128)||(14831814-14831914)
chr5 (60-132)||(15409642-15409714)
chr5 (24-128)||(40145407-40145511)
chr5 (24-128)||(42414298-42414402)
chr5 (23-129)||(2252163-2252269)
chr5 (24-129)||(6679697-6679802)
chr5 (24-128)||(33825320-33825424)
chr5 (23-130)||(3921260-3921367)
chr5 (65-123)||(10356639-10356698)
chr5 (23-130)||(31008986-31009093)
chr5 (65-131)||(39688934-39689000)
chr5 (39-108)||(10227905-10227974)
chr5 (23-128)||(20073511-20073616)
chr5 (21-74)||(25831339-25831392)
[»] chr8 (32 HSPs)
chr8 (243-463)||(6451635-6451855)
chr8 (255-465)||(6457737-6457947)
chr8 (14-130)||(42221513-42221629)
chr8 (24-128)||(1179936-1180040)
chr8 (23-127)||(5957831-5957935)
chr8 (24-128)||(34012292-34012396)
chr8 (23-129)||(37038478-37038584)
chr8 (24-129)||(44507083-44507188)
chr8 (24-128)||(12831047-12831151)
chr8 (24-128)||(15197333-15197437)
chr8 (24-128)||(40423939-40424043)
chr8 (60-123)||(10621119-10621182)
chr8 (24-131)||(14547919-14548026)
chr8 (65-138)||(4854900-4854973)
chr8 (24-128)||(504117-504221)
chr8 (24-128)||(43414577-43414681)
chr8 (65-130)||(24307627-24307692)
chr8 (14-130)||(10284617-10284733)
chr8 (60-128)||(15048214-15048281)
chr8 (24-128)||(23122593-23122697)
chr8 (23-131)||(24307788-24307896)
chr8 (23-130)||(16056396-16056503)
chr8 (23-130)||(16383375-16383482)
chr8 (59-128)||(20074965-20075034)
chr8 (20-128)||(30183867-30183975)
chr8 (63-130)||(34307214-34307281)
chr8 (23-129)||(32032724-32032829)
chr8 (23-108)||(8841427-8841512)
chr8 (21-74)||(42354581-42354634)
chr8 (21-129)||(17443824-17443932)
chr8 (272-324)||(6353049-6353101)
chr8 (24-84)||(9122229-9122289)
[»] chr7 (34 HSPs)
chr7 (24-129)||(36362025-36362130)
chr7 (24-129)||(36361909-36362014)
chr7 (24-129)||(3434561-3434666)
chr7 (24-128)||(19329842-19329946)
chr7 (24-130)||(8080379-8080485)
chr7 (24-125)||(3783998-3784099)
chr7 (24-131)||(7389386-7389493)
chr7 (24-130)||(19436183-19436289)
chr7 (24-130)||(38837215-38837321)
chr7 (24-130)||(40957705-40957811)
chr7 (24-128)||(35137533-35137637)
chr7 (23-131)||(36208170-36208278)
chr7 (14-130)||(45223040-45223156)
chr7 (24-125)||(3694370-3694471)
chr7 (24-128)||(38267040-38267144)
chr7 (23-130)||(35468850-35468957)
chr7 (24-123)||(35522881-35522980)
chr7 (21-128)||(41423682-41423789)
chr7 (23-129)||(22343360-22343466)
chr7 (23-129)||(41915740-41915846)
chr7 (24-128)||(4999510-4999614)
chr7 (21-97)||(16374817-16374893)
chr7 (21-130)||(18207178-18207286)
chr7 (59-128)||(46374833-46374902)
chr7 (62-130)||(10343597-10343665)
chr7 (80-130)||(11044186-11044236)
chr7 (63-128)||(32564461-32564526)
chr7 (60-128)||(21234401-21234469)
chr7 (24-127)||(32951489-32951592)
chr7 (63-130)||(38044195-38044262)
chr7 (21-128)||(39255917-39256023)
chr7 (23-105)||(8238236-8238318)
chr7 (59-129)||(46033832-46033902)
chr7 (67-128)||(40846152-40846213)
[»] chr3 (33 HSPs)
chr3 (24-130)||(49607412-49607518)
chr3 (21-128)||(14623832-14623939)
chr3 (21-127)||(13898048-13898154)
chr3 (25-130)||(27714888-27714993)
chr3 (21-129)||(8956761-8956869)
chr3 (24-128)||(26141528-26141632)
chr3 (24-128)||(53982011-53982115)
chr3 (24-123)||(52629305-52629404)
chr3 (24-131)||(54868891-54868998)
chr3 (24-128)||(33644200-33644304)
chr3 (60-131)||(11095385-11095456)
chr3 (24-127)||(31456690-31456793)
chr3 (24-129)||(17470404-17470509)
chr3 (21-125)||(25407140-25407245)
chr3 (24-116)||(20764911-20765003)
chr3 (23-131)||(33118846-33118954)
chr3 (21-129)||(35536625-35536733)
chr3 (59-131)||(35965805-35965877)
chr3 (24-124)||(48587087-48587187)
chr3 (59-130)||(11347953-11348024)
chr3 (23-129)||(24699949-24700055)
chr3 (23-128)||(8076393-8076498)
chr3 (24-132)||(41189760-41189868)
chr3 (59-128)||(51419391-51419460)
chr3 (14-129)||(21746174-21746284)
chr3 (24-116)||(39670023-39670115)
chr3 (21-128)||(41080709-41080814)
chr3 (60-130)||(36707456-36707526)
chr3 (23-116)||(26754707-26754800)
chr3 (25-130)||(35093583-35093688)
chr3 (23-128)||(45058548-45058652)
chr3 (24-132)||(11907367-11907475)
chr3 (24-128)||(47531865-47531969)
[»] chr6 (21 HSPs)
chr6 (21-128)||(31953023-31953130)
chr6 (24-130)||(23128123-23128229)
chr6 (24-129)||(11427615-11427722)
chr6 (24-128)||(17598554-17598658)
chr6 (21-130)||(12732480-12732589)
chr6 (24-124)||(28536484-28536582)
chr6 (24-128)||(32869678-32869782)
chr6 (21-123)||(9379705-9379807)
chr6 (24-125)||(22880654-22880755)
chr6 (62-127)||(946377-946442)
chr6 (24-129)||(31976247-31976352)
chr6 (23-131)||(15990037-15990145)
chr6 (23-130)||(30341355-30341462)
chr6 (23-128)||(15508019-15508124)
chr6 (60-128)||(31109432-31109500)
chr6 (60-130)||(31110793-31110861)
chr6 (24-130)||(6209461-6209567)
chr6 (23-112)||(4231564-4231653)
chr6 (46-130)||(15832575-15832659)
chr6 (24-128)||(29857827-29857931)
chr6 (63-129)||(22422053-22422119)
[»] chr4 (30 HSPs)
chr4 (23-130)||(50052423-50052530)
chr4 (24-130)||(480443-480549)
chr4 (24-128)||(6034044-6034148)
chr4 (24-131)||(48183045-48183152)
chr4 (24-130)||(42044363-42044469)
chr4 (23-128)||(50526166-50526271)
chr4 (24-128)||(11511458-11511562)
chr4 (23-130)||(29239884-29239991)
chr4 (61-128)||(40574779-40574846)
chr4 (45-131)||(29547976-29548062)
chr4 (21-131)||(29977882-29977992)
chr4 (23-128)||(3481654-3481759)
chr4 (24-129)||(29234241-29234346)
chr4 (24-128)||(41236347-41236451)
chr4 (24-131)||(23608232-23608339)
chr4 (63-128)||(8343198-8343263)
chr4 (63-131)||(55475188-55475256)
chr4 (24-130)||(24995103-24995209)
chr4 (21-131)||(47104541-47104651)
chr4 (23-129)||(47986207-47986313)
chr4 (23-129)||(50813887-50813993)
chr4 (24-128)||(54473529-54473633)
chr4 (23-130)||(19670711-19670818)
chr4 (62-128)||(31910192-31910258)
chr4 (23-108)||(17983738-17983823)
chr4 (16-84)||(18769035-18769103)
chr4 (24-123)||(53352562-53352660)
chr4 (21-78)||(28480261-28480318)
chr4 (21-78)||(28481136-28481193)
chr4 (21-78)||(28482011-28482068)
[»] chr2 (34 HSPs)
chr2 (24-131)||(9058477-9058584)
chr2 (273-451)||(42693847-42694025)
chr2 (24-129)||(7465731-7465836)
chr2 (24-128)||(13438343-13438447)
chr2 (24-128)||(17473020-17473124)
chr2 (14-130)||(33436086-33436202)
chr2 (23-130)||(20700813-20700920)
chr2 (24-130)||(30915461-30915567)
chr2 (24-129)||(5574484-5574589)
chr2 (24-125)||(19930816-19930917)
chr2 (24-125)||(28863458-28863559)
chr2 (24-128)||(40613898-40614002)
chr2 (24-128)||(40701478-40701582)
chr2 (24-131)||(10249378-10249485)
chr2 (21-127)||(41575138-41575245)
chr2 (23-128)||(27864704-27864809)
chr2 (14-131)||(17823781-17823902)
chr2 (49-129)||(33436210-33436290)
chr2 (23-130)||(45097730-45097837)
chr2 (24-130)||(42257191-42257297)
chr2 (60-129)||(2533123-2533191)
chr2 (28-129)||(32505648-32505749)
chr2 (21-128)||(17819997-17820104)
chr2 (23-140)||(26891499-26891616)
chr2 (23-128)||(38732354-38732459)
chr2 (60-128)||(28381687-28381755)
chr2 (60-130)||(38273174-38273244)
chr2 (60-130)||(38882846-38882915)
chr2 (23-108)||(2997482-2997567)
chr2 (60-128)||(4060685-4060753)
chr2 (59-129)||(36168835-36168905)
chr2 (23-108)||(13365373-13365458)
chr2 (63-128)||(43490121-43490186)
chr2 (23-115)||(3439992-3440084)
[»] chr1 (29 HSPs)
chr1 (24-128)||(27564731-27564835)
chr1 (24-128)||(47452316-47452420)
chr1 (14-128)||(3302519-3302633)
chr1 (23-129)||(51898678-51898784)
chr1 (24-128)||(3000319-3000423)
chr1 (24-128)||(9474872-9474976)
chr1 (28-130)||(2581913-2582015)
chr1 (24-130)||(32813245-32813351)
chr1 (24-130)||(38595152-38595258)
chr1 (24-129)||(50630457-50630562)
chr1 (24-128)||(37649198-37649302)
chr1 (23-128)||(41608488-41608593)
chr1 (24-125)||(44548372-44548473)
chr1 (24-128)||(43132-43236)
chr1 (24-128)||(48716278-48716382)
chr1 (24-130)||(8346384-8346490)
chr1 (24-130)||(38632317-38632423)
chr1 (24-129)||(37926434-37926539)
chr1 (14-123)||(44453984-44454093)
chr1 (23-128)||(50590995-50591100)
chr1 (23-130)||(5958995-5959102)
chr1 (59-130)||(23597122-23597193)
chr1 (60-131)||(49811559-49811630)
chr1 (59-129)||(7740732-7740802)
chr1 (24-121)||(26440741-26440838)
chr1 (24-129)||(41758804-41758909)
chr1 (24-97)||(13414792-13414865)
chr1 (62-131)||(26274429-26274498)
chr1 (23-127)||(11152373-11152476)
[»] scaffold0321 (1 HSPs)
scaffold0321 (24-130)||(10105-10211)
[»] scaffold1268 (1 HSPs)
scaffold1268 (23-128)||(924-1029)
[»] scaffold1267 (1 HSPs)
scaffold1267 (23-128)||(924-1029)
[»] scaffold0018 (1 HSPs)
scaffold0018 (23-108)||(152518-152603)
[»] scaffold0237 (1 HSPs)
scaffold0237 (24-128)||(4029-4133)
[»] scaffold0110 (1 HSPs)
scaffold0110 (23-128)||(8858-8963)


Alignment Details
Target: chr5 (Bit Score: 376; Significance: 0; HSPs: 27)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 376; E-Value: 0
Query Start/End: Original strand, 18 - 469
Target Start/End: Complemental strand, 9603923 - 9603475
Alignment:
Q  18 gaaatgaaagagaaagtgtgattgtatgggatccacatgatcacgtgtcagatttttgtgtaggtgtcaatggatgtattaccacctaaggatgtctata 117  Q
    |||||||||||||||||||||||||||||| |||| |||| || ||||||||||||||||||||||| ||||  ||||||| ||||||||||||| |||     
T  9603923 gaaatgaaagagaaagtgtgattgtatggggtccatatgaccatgtgtcagatttttgtgtaggtgtgaatgagtgtattatcacctaaggatgtatatg 9603824  T
Q  118 tatcattactcttacttaatataatgctaacacaggtattgtgactttataatttatatttatgggaaatgctaa-atttgccctaagggttagggcatt 216  Q
    ||||||||||||||    ||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||    
T  9603823 tatcattactctta----atataatgctaacacagatattgtgactttataatctatatttatgggaaatgctaacatttgccctaagggttagggcatt 9603728  T
Q  217 ggaaaatatgttaatttattttataaaagattaataatgtacctctgattacatgtggtggtggaaacttgaggacttgttcaccatcagtgcggaaaat 316  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9603727 ggaaaatatgttaatttattttacaaaagattaataatgtacctctgattacatgtggtggtggaaacttgaggacttgttcaccatcagtgcggaaaat 9603628  T
Q  317 ttccttgagtactggtaagggactgattttgctcaatatatgtgtaggaagttcaattccaccttcaaataagtcacgcacttcatcgaagctatcaaac 416  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9603627 ttccttgagtactggtaagggactgattttgctcaatatatgtgtaggaagttcaattccaccttcaaataagtcacgcacttcatcgaagctatcaaac 9603528  T
Q  417 tcatttggagtgaaattcaaatcaaagattacagatttaaacaaaggtaacac 469  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9603527 tcatttggagtgaaattcaaatcaaagattacagatttaaacaaaggtaacac 9603475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 24 - 129
Target Start/End: Complemental strand, 2740378 - 2740273
Alignment:
Q  24 aaagagaaagtgtgattgtatgggatccacatgatcacgtgtcagatttttgtgtaggtgtcaatggatgtattaccacctaaggatgtctatatatcat 123  Q
    |||||||||||||| ||||  ||||||||| |||  ||||||||||||||||||| |||||||| || |||||| |||||||||||||||||| ||||||    
T  2740378 aaagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaaggatgtctatgtatcat 2740279  T
Q  124 tactct 129  Q
    ||||||    
T  2740278 tactct 2740273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 19 - 127
Target Start/End: Complemental strand, 16328010 - 16327902
Alignment:
Q  19 aaatgaaagagaaagtgtgattgtatgggatccacatgatcacgtgtcagatttttgtgtaggtgtcaatggatgtattaccacctaaggatgtctatat 118  Q
    |||||||||| |||||||| |||| || | | ||||||| |||||||||||||||| ||| |||||||||||||||||| |||||||||||| | ||| |    
T  16328010 aaatgaaagaaaaagtgtgcttgtgtgaggtgcacatgaacacgtgtcagatttttatgtgggtgtcaatggatgtattgccacctaaggatatttatct 16327911  T
Q  119 atcattact 127  Q
    |||||||||    
T  16327910 atcattact 16327902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 24 - 128
Target Start/End: Original strand, 33149634 - 33149738
Alignment:
Q  24 aaagagaaagtgtgattgtatgggatccacatgatcacgtgtcagatttttgtgtaggtgtcaatggatgtattaccacctaaggatgtctatatatcat 123  Q
    |||||||||||||| ||||  ||||||||| |||  |||||||| |||||||||| |||||||| || ||||||||||||||||| ||||||| ||||||    
T  33149634 aaagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcaaatttttgtgtgggtgtcaaagggtgtattaccacctaagggtgtctatgtatcat 33149733  T
Q  124 tactc 128  Q
    |||||    
T  33149734 tactc 33149738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 23 - 128
Target Start/End: Original strand, 35943887 - 35943992
Alignment:
Q  23 gaaagagaaagtgtgattgtatgggatccacatgatcacgtgtcagatttttgtgtaggtgtcaatggatgtattaccacctaaggatgtctatatatca 122  Q
    ||||||||||||||| |||| |||||||||| | |  ||||||||||||||||||| ||||||||  |||||||| |||||||||| ||||||| |||||    
T  35943887 gaaagagaaagtgtgcttgtgtgggatccacgtaactacgtgtcagatttttgtgtgggtgtcaaatgatgtattgccacctaagggtgtctatgtatca 35943986  T
Q  123 ttactc 128  Q
    | ||||    
T  35943987 taactc 35943992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 24 - 128
Target Start/End: Complemental strand, 28177879 - 28177775
Alignment:
Q  24 aaagagaaagtgtgattgtatgggatccacatgatcacgtgtcagatttttgtgtaggtgtcaatggatgtattaccacctaaggatgtctatatatcat 123  Q
    |||||||||||||| ||||  ||| ||||  ||| |||||||||||||||||||| |||||||| || |||||| |||||||||||||||||| ||||||    
T  28177879 aaagagaaagtgtgtttgtgcggggtccatgtgaccacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaaggatgtctatgtatcat 28177780  T
Q  124 tactc 128  Q
     ||||    
T  28177779 aactc 28177775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 24 - 128
Target Start/End: Complemental strand, 35785303 - 35785199
Alignment:
Q  24 aaagagaaagtgtgattgtatgggatccacatgatcacgtgtcagatttttgtgtaggtgtcaatggatgtattaccacctaaggatgtctatatatcat 123  Q
    |||||||||||||||||||  ||||||||| | |  ||||||||||||||||||| ||||||||  | |||||| |||||||||| ||||||| ||||||    
T  35785303 aaagagaaagtgtgattgtgcgggatccacgtaactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccacctaagggtgtctatgtatcat 35785204  T
Q  124 tactc 128  Q
    |||||    
T  35785203 tactc 35785199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 24 - 130
Target Start/End: Original strand, 18520880 - 18520986
Alignment:
Q  24 aaagagaaagtgtgattgtatgggatccacatgatcacgtgtcagatttttgtgtaggtgtcaatggatgtattaccacctaaggatgtctatatatcat 123  Q
    |||||||||||||| ||||  ||| ||||| |||  ||||||||||||||||||| |||||||| || |||||| |||||||||| ||||||| ||||||    
T  18520880 aaagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcat 18520979  T
Q  124 tactctt 130  Q
    || ||||    
T  18520980 tattctt 18520986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 25 - 130
Target Start/End: Complemental strand, 13811755 - 13811650
Alignment:
Q  25 aagagaaagtgtgattgtatgggatccacatgatcacgtgtcagatttttgtgtaggtgtcaatggatgtattaccacctaaggatgtctatatatcatt 124  Q
    ||||||||||||| ||||  ||| ||||| |||  ||||||||||||||||||| ||||||||  |||||||| |||||||||| ||||||| |||| ||    
T  13811755 aagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaatgatgtattgccacctaagggtgtctatgtatcttt 13811656  T
Q  125 actctt 130  Q
    ||||||    
T  13811655 actctt 13811650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 24 - 128
Target Start/End: Complemental strand, 26720620 - 26720516
Alignment:
Q  24 aaagagaaagtgtgattgtatgggatccacatgatcacgtgtcagatttttgtgtaggtgtcaatggatgtattaccacctaaggatgtctatatatcat 123  Q
    |||||||||||||| ||||  ||||||||  ||  |||||||||||||||| ||||||||| || || |||||| |||||||||||||||||| ||||||    
T  26720620 aaagagaaagtgtgcttgtgcgggatccatgtggccacgtgtcagatttttttgtaggtgttaaagggtgtattgccacctaaggatgtctatgtatcat 26720521  T
Q  124 tactc 128  Q
     ||||    
T  26720520 aactc 26720516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 24 - 128
Target Start/End: Complemental strand, 26990369 - 26990265
Alignment:
Q  24 aaagagaaagtgtgattgtatgggatccacatgatcacgtgtcagatttttgtgtaggtgtcaatggatgtattaccacctaaggatgtctatatatcat 123  Q
    |||||||||||||| ||||  ||||||||  ||  |||||||||||||||| ||||||||| || || |||||| |||||||||||||||||| ||||||    
T  26990369 aaagagaaagtgtgcttgtgcgggatccatgtggccacgtgtcagatttttttgtaggtgttaaagggtgtattgccacctaaggatgtctatgtatcat 26990270  T
Q  124 tactc 128  Q
     ||||    
T  26990269 aactc 26990265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 24 - 130
Target Start/End: Original strand, 36732938 - 36733044
Alignment:
Q  24 aaagagaaagtgtgattgtatgggatccacatgatcacgtgtcagatttttgtgtaggtgtcaatggatgtattaccacctaaggatgtctatatatcat 123  Q
    |||||||||||||| ||||  ||| ||||| |||  | ||||||||||||||||| |||||||| || |||||| | |||||||| ||||||| ||||||    
T  36732938 aaagagaaagtgtgcttgtgcggggtccacgtgactatgtgtcagatttttgtgtgggtgtcaaagggtgtattgctacctaagggtgtctatgtatcat 36733037  T
Q  124 tactctt 130  Q
    |||||||    
T  36733038 tactctt 36733044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 24 - 105
Target Start/End: Original strand, 39557513 - 39557594
Alignment:
Q  24 aaagagaaagtgtgattgtatgggatccacatgatcacgtgtcagatttttgtgtaggtgtcaatggatgtattaccaccta 105  Q
    |||||||||||||||||||||||| ||||  |||||||||||||||||||||||| | ||| ||  | ||||||||||||||    
T  39557513 aaagagaaagtgtgattgtatggggtccatgtgatcacgtgtcagatttttgtgtggatgttaagaggtgtattaccaccta 39557594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 28 - 128
Target Start/End: Complemental strand, 14831914 - 14831814
Alignment:
Q  28 agaaagtgtgattgtatgggatccacatgatcacgtgtcagatttttgtgtaggtgtcaatggatgtattaccacctaaggatgtctatatatcattact 127  Q
    |||||||||| ||||  ||||||||| |||  ||||||||||||||| ||| |||||||| || |||||| |||||||||  ||||||| ||||||||||    
T  14831914 agaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttatgtgggtgtcaaagggtgtattgccacctaagagtgtctatgtatcattact 14831815  T
Q  128 c 128  Q
    |    
T  14831814 c 14831814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 60 - 132
Target Start/End: Original strand, 15409642 - 15409714
Alignment:
Q  60 acgtgtcagatttttgtgtaggtgtcaatggatgtattaccacctaaggatgtctatatatcattactcttac 132  Q
    ||||||||||||||||||| |||||||| | |||||||  ||||||||||||||||| |||||| ||||||||    
T  15409642 acgtgtcagatttttgtgtgggtgtcaaagaatgtattgtcacctaaggatgtctatgtatcataactcttac 15409714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 24 - 128
Target Start/End: Complemental strand, 40145511 - 40145407
Alignment:
Q  24 aaagagaaagtgtgattgtatgggatccacatgatcacgtgtcagatttttgtgtaggtgtcaatggatgtattaccacctaaggatgtctatatatcat 123  Q
    |||||||||||||| ||||  ||| ||||| |||  ||||||||||||||||||| | ||| || || |||||| |||||||||| ||||||| ||||||    
T  40145511 aaagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtggatgttaaagggtgtattgccacctaagggtgtctatgtatcat 40145412  T
Q  124 tactc 128  Q
    |||||    
T  40145411 tactc 40145407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 24 - 128
Target Start/End: Original strand, 42414298 - 42414402
Alignment:
Q  24 aaagagaaagtgtgattgtatgggatccacatgatcacgtgtcagatttttgtgtaggtgtcaatggatgtattaccacctaaggatgtctatatatcat 123  Q
    ||||| |||||||| ||||  ||| |||||||||  ||||||||||||||||||| |||||||| || |||||| |||||||  | ||||||| ||||||    
T  42414298 aaagataaagtgtgcttgtgcggggtccacatgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctactggtgtctatgtatcat 42414397  T
Q  124 tactc 128  Q
    |||||    
T  42414398 tactc 42414402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 23 - 129
Target Start/End: Original strand, 2252163 - 2252269
Alignment:
Q  23 gaaagagaaagtgtgattgtatgggatccacatgatcacgtgtcagatttttgtgtaggtgtcaatggatgtattaccacctaaggatgtctatatatca 122  Q
    ||||||||||||||  ||||  ||| |||| |||  ||| |||||||||||||||| |||||||| || |||||| |||||||||||||| ||| |||||    
T  2252163 gaaagagaaagtgtacttgtgcggggtccatatggccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaaggatgtttatgtatca 2252262  T
Q  123 ttactct 129  Q
    | |||||    
T  2252263 taactct 2252269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 24 - 129
Target Start/End: Complemental strand, 6679802 - 6679697
Alignment:
Q  24 aaagagaaagtgtgattgtatgggatccacatgatcacgtgtcagatttttgtgtaggtgtcaatggatgtattaccacctaaggatgtctatatatcat 123  Q
    ||||||||| |||| ||||  ||| ||||  ||| |||||||||||||||||||| ||||||||  | |||||| |||||||| ||||||||| ||||||    
T  6679802 aaagagaaaatgtgtttgtgcggggtccatgtgaccacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccacctaaagatgtctatgtatcat 6679703  T
Q  124 tactct 129  Q
     |||||    
T  6679702 aactct 6679697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 24 - 128
Target Start/End: Original strand, 33825320 - 33825424
Alignment:
Q  24 aaagagaaagtgtgattgtatgggatccacatgatcacgtgtcagatttttgtgtaggtgtcaatggatgtattaccacctaaggatgtctatatatcat 123  Q
    |||||||||||||| |||| |  | | ||||||| |||||||||||||||| ||| |||||||| |  |||||| ||||||||| ||||||||  |||||    
T  33825320 aaagagaaagtgtgcttgtgtaaggttcacatgaacacgtgtcagatttttatgtgggtgtcaaggagtgtattgccacctaagaatgtctatgcatcat 33825419  T
Q  124 tactc 128  Q
    |||||    
T  33825420 tactc 33825424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 23 - 130
Target Start/End: Original strand, 3921260 - 3921367
Alignment:
Q  23 gaaagagaaagtgtgattgtatgggatccacatgatcacgtgtcagatttttgtgtaggtgtcaatggatgtattaccacctaaggatgtctatatatca 122  Q
    ||||||||||||||  ||||  ||| |||| |||  ||| |||||||||||||||| |||||||| || |||||| |||||||||| ||| ||| |||||    
T  3921260 gaaagagaaagtgtacttgtgcggggtccatatggccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaagggtgtttatgtatca 3921359  T
Q  123 ttactctt 130  Q
    | ||||||    
T  3921360 taactctt 3921367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 65 - 123
Target Start/End: Complemental strand, 10356698 - 10356639
Alignment:
Q  65 tcagatttttgtgtaggtgtcaatgg-atgtattaccacctaaggatgtctatatatcat 123  Q
    |||||||||||||| ||||||||||| ||||||| |||||||||||||||||| ||||||    
T  10356698 tcagatttttgtgtgggtgtcaatgggatgtattgccacctaaggatgtctatgtatcat 10356639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 23 - 130
Target Start/End: Complemental strand, 31009093 - 31008986
Alignment:
Q  23 gaaagagaaagtgtgattgtatgggatccacatgatcacgtgtcagatttttgtgtaggtgtcaatggatgtattaccacctaaggatgtctatatatca 122  Q
    |||| |||||||||| ||||  ||||||||| |||  ||||||||||||||||||| |||||  | | |||||||  ||||||||||||| ||| |||||    
T  31009093 gaaatagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtggaagaatgtattgtcacctaaggatgtttatgtatca 31008994  T
Q  123 ttactctt 130  Q
    | ||||||    
T  31008993 taactctt 31008986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 65 - 131
Target Start/End: Original strand, 39688934 - 39689000
Alignment:
Q  65 tcagatttttgtgtaggtgtcaatggatgtattaccacctaaggatgtctatatatcattactctta 131  Q
    |||||||||||||| |||||||| ||||||||| |||| ||||| ||| ||| |||||| |||||||    
T  39688934 tcagatttttgtgtgggtgtcaagggatgtattgccacttaagggtgtttatgtatcataactctta 39689000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 39 - 108
Target Start/End: Original strand, 10227905 - 10227974
Alignment:
Q  39 ttgtatgggatccacatgatcacgtgtcagatttttgtgtaggtgtcaatggatgtattaccacctaagg 108  Q
    |||| ||| |||||||| ||||| |||||||||||||| | |||||||| ||||||||| |||| |||||    
T  10227905 ttgtgtggaatccacataatcacatgtcagatttttgtatcggtgtcaagggatgtattgccacataagg 10227974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 23 - 128
Target Start/End: Original strand, 20073511 - 20073616
Alignment:
Q  23 gaaagagaaagtgtgattgtatgggatccacatgatcacgtgtcagatttttgtgtaggtgtcaatggatgtattaccacctaaggatgtctatatatca 122  Q
    |||| |||||||||| ||||   || ||||| || |||||||  |||||||| |||  ||||||| || ||||||  || |||| |||||||||||||||    
T  20073511 gaaatagaaagtgtgcttgtgcagggtccacgtggtcacgtgcaagatttttatgtgagtgtcaaagggtgtattgtcatctaatgatgtctatatatca 20073610  T
Q  123 ttactc 128  Q
    ||||||    
T  20073611 ttactc 20073616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 21 - 74
Target Start/End: Complemental strand, 25831392 - 25831339
Alignment:
Q  21 atgaaagagaaagtgtgattgtatgggatccacatgatcacgtgtcagattttt 74  Q
    |||||||||||| |||| |||| |||| ||||||||| ||||||| ||||||||    
T  25831392 atgaaagagaaaatgtgtttgtgtggggtccacatgaccacgtgttagattttt 25831339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 90; Significance: 3e-43; HSPs: 32)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 243 - 463
Target Start/End: Original strand, 6451635 - 6451855
Alignment:
Q  243 aagattaataatgtacctctgattacatgtggtggtggaaacttgaggacttgttcaccatcagtgcggaaaatttccttgagtactggtaagggactga 342  Q
    ||||| ||||| |||||||| ||||| || |||||||||||||| ||| |||||||||| || |||||||  |||||||| ||  |||| ||||| ||||    
T  6451635 aagatgaataaagtacctctaattacttgaggtggtggaaacttaagggcttgttcaccgtctgtgcggaggatttccttaagggctggcaaggggctga 6451734  T
Q  343 ttttgctcaatatatgtgtaggaagttcaattccaccttcaaataagt-cacgcacttcatcgaagctatcaaactcatttggagtgaaattcaaatcaa 441  Q
    ||| ||| | ||||| ||||||||| | |||||||||||| || |||| ||||||||||||||||||||||||||||||| || |||||||||| |||||    
T  6451735 tttggctgagtatatctgtaggaagcttaattccaccttcgaa-aagtccacgcacttcatcgaagctatcaaactcattcggggtgaaattcagatcaa 6451833  T
Q  442 agattacagatttaaacaaagg 463  Q
    | ||||||||||  ||||||||    
T  6451834 aaattacagattgtaacaaagg 6451855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 255 - 465
Target Start/End: Original strand, 6457737 - 6457947
Alignment:
Q  255 gtacctctgattacatgtggtggtggaaacttgaggacttgttcaccatcagtgcggaaaatttccttgagtactggtaagggactgattttgctcaata 354  Q
    |||||| |||||||||| || |||||||||||||||||||||||||| |||||||| || |||||||| ||  | ||||||||||| ||||  || | ||    
T  6457737 gtacctttgattacatgaggaggtggaaacttgaggacttgttcaccgtcagtgcgaaagatttccttaagggccggtaagggactaatttgactaagta 6457836  T
Q  355 tatgtgtaggaagttcaattccaccttcaaataagt-cacgcacttcatcgaagctatcaaactcatttggagtgaaattcaaatcaaagattacagatt 453  Q
    ||| ||||||||| | ||| |||||||| || |||| |||| ||||||||||||||||| ||||||||||| |||||||| |  ||||| || |||||||    
T  6457837 tatctgtaggaagcttaatcccaccttcgaa-aagtccacgtacttcatcgaagctatcgaactcatttggtgtgaaattgaggtcaaaaatcacagatt 6457935  T
Q  454 taaacaaaggta 465  Q
    ||||||| ||||    
T  6457936 taaacaatggta 6457947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 14 - 130
Target Start/End: Complemental strand, 42221629 - 42221513
Alignment:
Q  14 agatgaaatgaaagagaaagtgtgattgtatgggatccacatgatcacgtgtcagatttttgtgtaggtgtcaatggatgtattaccacctaaggatgtc 113  Q
    |||||| ||||||||||||||||| ||||||||| |||| ||||| ||||||||||||||||||| |||||| | | |||||||  |||||||||||||     
T  42221629 agatgagatgaaagagaaagtgtgcttgtatggggtccatatgattacgtgtcagatttttgtgtgggtgtccaggaatgtattgtcacctaaggatgta 42221530  T
Q  114 tatatatcattactctt 130  Q
    ||| |||||||||||||    
T  42221529 tatgtatcattactctt 42221513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 24 - 128
Target Start/End: Original strand, 1179936 - 1180040
Alignment:
Q  24 aaagagaaagtgtgattgtatgggatccacatgatcacgtgtcagatttttgtgtaggtgtcaatggatgtattaccacctaaggatgtctatatatcat 123  Q
    |||||||||||||| ||||  || ||||||||||  ||||||||||||||||||| |||||||| || ||||||||||||||||| ||||||| ||||||    
T  1179936 aaagagaaagtgtgcttgtgcggaatccacatgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattaccacctaagggtgtctatgtatcat 1180035  T
Q  124 tactc 128  Q
    |||||    
T  1180036 tactc 1180040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 23 - 127
Target Start/End: Complemental strand, 5957935 - 5957831
Alignment:
Q  23 gaaagagaaagtgtgattgtatgggatccacatgatcacgtgtcagatttttgtgtaggtgtcaatggatgtattaccacctaaggatgtctatatatca 122  Q
    ||||||||||||||||||||  ||||||||| |||  ||||||||||||||||||| |||||||| || |||||| ||||||||| |||||||| |||||    
T  5957935 gaaagagaaagtgtgattgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagaatgtctatgtatca 5957836  T
Q  123 ttact 127  Q
    |||||    
T  5957835 ttact 5957831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 24 - 128
Target Start/End: Original strand, 34012292 - 34012396
Alignment:
Q  24 aaagagaaagtgtgattgtatgggatccacatgatcacgtgtcagatttttgtgtaggtgtcaatggatgtattaccacctaaggatgtctatatatcat 123  Q
    |||||||||||||| ||||  ||||||||| |||  |||||||| |||||||||| |||||||| || ||||||||||||||||| ||||||| ||||||    
T  34012292 aaagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcaaatttttgtgtgggtgtcaaagggtgtattaccacctaagggtgtctatgtatcat 34012391  T
Q  124 tactc 128  Q
    |||||    
T  34012392 tactc 34012396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 23 - 129
Target Start/End: Complemental strand, 37038584 - 37038478
Alignment:
Q  23 gaaagagaaagtgtgattgtatgggatccacatgatcacgtgtcagatttttgtgtaggtgtcaatggatgtattaccacctaaggatgtctatatatca 122  Q
    |||| |||||||||| ||||  ||||||||| |||  ||||||||||||||||||| |||||||| || |||||| |||||||| ||||||||| |||||    
T  37038584 gaaatagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaaagatgtctatgtatca 37038485  T
Q  123 ttactct 129  Q
    |||||||    
T  37038484 ttactct 37038478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 24 - 129
Target Start/End: Original strand, 44507083 - 44507188
Alignment:
Q  24 aaagagaaagtgtgattgtatgggatccacatgatcacgtgtcagatttttgtgtaggtgtcaatggatgtattaccacctaaggatgtctatatatcat 123  Q
    ||||||||||| || ||||| ||| ||||| |||  ||||||||||||||||||| ||||| || |  ||||||||||||||||| ||||||| ||||||    
T  44507083 aaagagaaagtatgcttgtacggggtccacgtgactacgtgtcagatttttgtgtgggtgttaaagagtgtattaccacctaagggtgtctatgtatcat 44507182  T
Q  124 tactct 129  Q
    ||||||    
T  44507183 tactct 44507188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 24 - 128
Target Start/End: Complemental strand, 12831151 - 12831047
Alignment:
Q  24 aaagagaaagtgtgattgtatgggatccacatgatcacgtgtcagatttttgtgtaggtgtcaatggatgtattaccacctaaggatgtctatatatcat 123  Q
    |||||||||||||| ||||  ||| ||||| |||  ||||||||||||||||||| |||||||| || ||||||  ||||||||| ||||||| ||||||    
T  12831151 aaagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgtcacctaagggtgtctatgtatcat 12831052  T
Q  124 tactc 128  Q
    |||||    
T  12831051 tactc 12831047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 24 - 128
Target Start/End: Complemental strand, 15197437 - 15197333
Alignment:
Q  24 aaagagaaagtgtgattgtatgggatccacatgatcacgtgtcagatttttgtgtaggtgtcaatggatgtattaccacctaaggatgtctatatatcat 123  Q
    |||||||||||||| ||||  ||| ||||| |||  ||||||||||||||||||| |||||||| || |||||| |||||||||  ||||||| ||||||    
T  15197437 aaagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagagtgtctatgtatcat 15197338  T
Q  124 tactc 128  Q
    |||||    
T  15197337 tactc 15197333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 24 - 128
Target Start/End: Original strand, 40423939 - 40424043
Alignment:
Q  24 aaagagaaagtgtgattgtatgggatccacatgatcacgtgtcagatttttgtgtaggtgtcaatggatgtattaccacctaaggatgtctatatatcat 123  Q
    |||||||||||||| ||||  ||| |||||||||  ||||||||||||||||||| | |||||| || |||||| |||||||||| | ||||| ||||||    
T  40423939 aaagagaaagtgtgcttgtgcggggtccacatgactacgtgtcagatttttgtgtggatgtcaaagggtgtattgccacctaagggtatctatgtatcat 40424038  T
Q  124 tactc 128  Q
    |||||    
T  40424039 tactc 40424043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 60 - 123
Target Start/End: Original strand, 10621119 - 10621182
Alignment:
Q  60 acgtgtcagatttttgtgtaggtgtcaatggatgtattaccacctaaggatgtctatatatcat 123  Q
    ||||||||||||||||||| |||||||| || ||||||||||||||||||||||||| ||||||    
T  10621119 acgtgtcagatttttgtgtgggtgtcaaagggtgtattaccacctaaggatgtctatgtatcat 10621182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 24 - 131
Target Start/End: Complemental strand, 14548026 - 14547919
Alignment:
Q  24 aaagagaaagtgtgattgtatgggatccacatgatcacgtgtcagatttttgtgtaggtgtcaatggatgtattaccacctaaggatgtctatatatcat 123  Q
    |||||||||||||| ||||  ||| ||||| |||  ||||||||||||||||||| ||||||||  | |||||| |||||||||| ||||||| |||| |    
T  14548026 aaagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaagggtgtctatgtatctt 14547927  T
Q  124 tactctta 131  Q
    ||||||||    
T  14547926 tactctta 14547919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 65 - 138
Target Start/End: Original strand, 4854900 - 4854973
Alignment:
Q  65 tcagatttttgtgtaggtgtcaatggatgtattaccacctaaggatgtctatatatcattactcttacttaata 138  Q
    |||||||||| ||||||||| || || |||||| |||||||||||||||||| |||||||||||||||| ||||    
T  4854900 tcagatttttatgtaggtgttaaagggtgtattgccacctaaggatgtctatgtatcattactcttactaaata 4854973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 24 - 128
Target Start/End: Original strand, 504117 - 504221
Alignment:
Q  24 aaagagaaagtgtgattgtatgggatccacatgatcacgtgtcagatttttgtgtaggtgtcaatggatgtattaccacctaaggatgtctatatatcat 123  Q
    |||||||| ||||| ||||  ||| ||||| |||  ||||||||||||||||||| ||||||||  | |||||| |||||||||| ||||||| ||||||    
T  504117 aaagagaatgtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccacctaagggtgtctatgtatcat 504216  T
Q  124 tactc 128  Q
    |||||    
T  504217 tactc 504221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 24 - 128
Target Start/End: Original strand, 43414577 - 43414681
Alignment:
Q  24 aaagagaaagtgtgattgtatgggatccacatgatcacgtgtcagatttttgtgtaggtgtcaatggatgtattaccacctaaggatgtctatatatcat 123  Q
    |||||||||||||| ||||  ||||||||  ||| ||||||| |||||||||||| |||||||| || ||| || ||| |||||||||||||| ||||||    
T  43414577 aaagagaaagtgtgcttgtgcgggatccatgtgaccacgtgttagatttttgtgtgggtgtcaaagggtgtgttgccatctaaggatgtctatgtatcat 43414676  T
Q  124 tactc 128  Q
     ||||    
T  43414677 aactc 43414681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 65 - 130
Target Start/End: Complemental strand, 24307692 - 24307627
Alignment:
Q  65 tcagatttttgtgtaggtgtcaatggatgtattaccacctaaggatgtctatatatcattactctt 130  Q
    |||||||||||||| |||||||||||||||||| |||||||||| ||| ||| |||||| ||||||    
T  24307692 tcagatttttgtgtgggtgtcaatggatgtattgccacctaagggtgtttatgtatcataactctt 24307627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 14 - 130
Target Start/End: Original strand, 10284617 - 10284733
Alignment:
Q  14 agatgaaatgaaagagaaagtgtgattgtatgggatccacatgatcacgtgtcagatttttgtgtaggtgtcaatggatgtattaccacctaaggatgtc 113  Q
    |||||||| ||||||||||||||| ||||  ||| ||||| |||  |||||||| |||||||||| |||||||| |  ||||||  ||| ||||| ||||    
T  10284617 agatgaaaggaaagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcaaatttttgtgtgggtgtcaaagagtgtattgtcacttaagggtgtc 10284716  T
Q  114 tatatatcattactctt 130  Q
    ||| |||||| ||||||    
T  10284717 tatgtatcataactctt 10284733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 60 - 128
Target Start/End: Original strand, 15048214 - 15048281
Alignment:
Q  60 acgtgtcagatttttgtgtaggtgtcaatggatgtattaccacctaaggatgtctatatatcattactc 128  Q
    ||||||||||||||||||| |||||||| || |||||| |||||||||||||||||| |||||| ||||    
T  15048214 acgtgtcagatttttgtgt-ggtgtcaaagggtgtattgccacctaaggatgtctatgtatcataactc 15048281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 24 - 128
Target Start/End: Original strand, 23122593 - 23122697
Alignment:
Q  24 aaagagaaagtgtgattgtatgggatccacatgatcacgtgtcagatttttgtgtaggtgtcaatggatgtattaccacctaaggatgtctatatatcat 123  Q
    |||||||||||||| || |  ||| ||||| |||  ||||||||||||||||||| ||||||||  | |||||| |||| ||||| ||||||| ||||||    
T  23122593 aaagagaaagtgtgcttatgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccacttaagggtgtctatgtatcat 23122692  T
Q  124 tactc 128  Q
    |||||    
T  23122693 tactc 23122697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 23 - 131
Target Start/End: Original strand, 24307788 - 24307896
Alignment:
Q  23 gaaagagaaagtgtgattgtatgggatccacatgatcacgtgtcagatttttgtgtaggtgtcaatggatgtattaccacctaaggatgtctatatatca 122  Q
    ||||||||||||||  ||||  ||| |||| |||  ||| | |||||||||||||| |||||||| ||||||||| |||||||||| ||| ||| |||||    
T  24307788 gaaagagaaagtgtacttgtgcggggtccatatggccacatatcagatttttgtgtgggtgtcaagggatgtattgccacctaagggtgtttatgtatca 24307887  T
Q  123 ttactctta 131  Q
    | |||||||    
T  24307888 taactctta 24307896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 23 - 130
Target Start/End: Original strand, 16056396 - 16056503
Alignment:
Q  23 gaaagagaaagtgtgattgtatgggatccacatgatcacgtgtcagatttttgtgtaggtgtcaatggatgtattaccacctaaggatgtctatatatca 122  Q
    ||||||||||||||  ||||  ||| |||| |||  ||| |||||||||||||||| |||||||| |||||||||  ||| ||||||||| ||| |||||    
T  16056396 gaaagagaaagtgtacttgtgcggggtccatatggccacatgtcagatttttgtgtgggtgtcaagggatgtattgtcacataaggatgtttatgtatca 16056495  T
Q  123 ttactctt 130  Q
    | ||||||    
T  16056496 taactctt 16056503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 23 - 130
Target Start/End: Complemental strand, 16383482 - 16383375
Alignment:
Q  23 gaaagagaaagtgtgattgtatgggatccacatgatcacgtgtcagatttttgtgtaggtgtcaatggatgtattaccacctaaggatgtctatatatca 122  Q
    ||||||||||||||  ||||  ||| |||| |||  ||| |||||||||||||||| |||||||| || |||||| |||||||||| ||| ||| |||||    
T  16383482 gaaagagaaagtgtacttgtgcggggtccatatggccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaagggtgtttatgtatca 16383383  T
Q  123 ttactctt 130  Q
    | ||||||    
T  16383382 taactctt 16383375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 59 - 128
Target Start/End: Original strand, 20074965 - 20075034
Alignment:
Q  59 cacgtgtcagatttttgtgtaggtgtcaatggatgtattaccacctaaggatgtctatatatcattactc 128  Q
    ||||||||| |||||| ||| |||||||| |  |||||| |||||||||||||||||| |||||||||||    
T  20074965 cacgtgtcacatttttatgtgggtgtcaaagagtgtattgccacctaaggatgtctatgtatcattactc 20075034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 20 - 128
Target Start/End: Original strand, 30183867 - 30183975
Alignment:
Q  20 aatgaaagagaaagtgtgattgtatgggatccacatgatcacgtgtcagatttttgtgtaggtgtcaatggatgtattaccacctaaggatgtctatata 119  Q
    |||||||||||||||||| || ||||   |||| ||||| |||| |||||||||||| |  ||||| | | ||||||| |||| ||||||||| ||| ||    
T  30183867 aatgaaagagaaagtgtgcttatatgaagtccatatgattacgtatcagatttttgtatgagtgtccaggaatgtattgccacgtaaggatgtatatgta 30183966  T
Q  120 tcattactc 128  Q
    |||||||||    
T  30183967 tcattactc 30183975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 63 - 130
Target Start/End: Complemental strand, 34307281 - 34307214
Alignment:
Q  63 tgtcagatttttgtgtaggtgtcaatggatgtattaccacctaaggatgtctatatatcattactctt 130  Q
    |||||||||||||||| |||||||| || |||||| |||||||||| ||| ||| |||||| ||||||    
T  34307281 tgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaagggtgtttatgtatcataactctt 34307214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 23 - 129
Target Start/End: Complemental strand, 32032829 - 32032724
Alignment:
Q  23 gaaagagaaagtgtgattgtatgggatccacatgatcacgtgtcagatttttgtgtaggtgtcaatggatgtattaccacctaaggatgtctatatatca 122  Q
    ||||||||||||||  ||||   ||||||| |||  ||| |||||||||||||||| | |||||| ||||||||| |||||||||| ||| ||| |||||    
T  32032829 gaaagagaaagtgtacttgtgcaggatccatatggccacatgtcagatttttgtgtggatgtcaa-ggatgtattgccacctaagggtgtttatgtatca 32032731  T
Q  123 ttactct 129  Q
    | |||||    
T  32032730 taactct 32032724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 23 - 108
Target Start/End: Original strand, 8841427 - 8841512
Alignment:
Q  23 gaaagagaaagtgtgattgtatgggatccacatgatcacgtgtcagatttttgtgtaggtgtcaatggatgtattaccacctaagg 108  Q
    ||||||||||||||| ||||  ||| ||||| |||  |||||| |||||||||||| |||||||| || |||| | ||||||||||    
T  8841427 gaaagagaaagtgtgcttgtgcggggtccacgtgactacgtgttagatttttgtgtgggtgtcaaagggtgtactgccacctaagg 8841512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 21 - 74
Target Start/End: Original strand, 42354581 - 42354634
Alignment:
Q  21 atgaaagagaaagtgtgattgtatgggatccacatgatcacgtgtcagattttt 74  Q
    ||||||||||||||||| || | || ||||||||||| ||||||||||||||||    
T  42354581 atgaaagagaaagtgtgcttatgtgagatccacatgaacacgtgtcagattttt 42354634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 21 - 129
Target Start/End: Complemental strand, 17443932 - 17443824
Alignment:
Q  21 atgaaagagaaagtgtgattgtatgggatccacatgatcacgtgtcagatttttgtgtaggtgtcaatggatgtattaccacctaaggatgtctatatat 120  Q
    ||||||||||||||||  |||| |||| |||||||||  || ||||||||||||||||  |||| ||    ||||||  ||||||||| ||||||| |||    
T  17443932 atgaaagagaaagtgtctttgtgtggggtccacatgactacatgtcagatttttgtgtgagtgttaagaagtgtattgtcacctaaggttgtctatgtat 17443833  T
Q  121 cattactct 129  Q
    ||| |||||    
T  17443832 cataactct 17443824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 272 - 324
Target Start/End: Original strand, 6353049 - 6353101
Alignment:
Q  272 tggtggtggaaacttgaggacttgttcaccatcagtgcggaaaatttccttga 324  Q
    ||||||||||||||| ||  |||||||||||||||  ||||||| ||||||||    
T  6353049 tggtggtggaaacttaagtgcttgttcaccatcagatcggaaaagttccttga 6353101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 24 - 84
Target Start/End: Complemental strand, 9122289 - 9122229
Alignment:
Q  24 aaagagaaagtgtgattgtatgggatccacatgatcacgtgtcagatttttgtgtaggtgt 84  Q
    |||||||||||||| ||||  ||||||||| |||  || |||||||||||||||| |||||    
T  9122289 aaagagaaagtgtgcttgtgcgggatccacgtgactacatgtcagatttttgtgtgggtgt 9122229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 66; Significance: 6e-29; HSPs: 34)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 24 - 129
Target Start/End: Complemental strand, 36362130 - 36362025
Alignment:
Q  24 aaagagaaagtgtgattgtatgggatccacatgatcacgtgtcagatttttgtgtaggtgtcaatggatgtattaccacctaaggatgtctatatatcat 123  Q
    |||||||||||||| |||| |||| ||||| |||  ||||||||||||||||||| |||||||| |||||||||||||||||||| ||||||| ||||||    
T  36362130 aaagagaaagtgtgcttgtgtggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaggatgtattaccacctaagggtgtctatgtatcat 36362031  T
Q  124 tactct 129  Q
    ||||||    
T  36362030 tactct 36362025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 24 - 129
Target Start/End: Original strand, 36361909 - 36362014
Alignment:
Q  24 aaagagaaagtgtgattgtatgggatccacatgatcacgtgtcagatttttgtgtaggtgtcaatggatgtattaccacctaaggatgtctatatatcat 123  Q
    |||||||||||||| |||| |||| ||||| |||  ||||||||||||||||||| |||||||| ||||||||| |||||||||| ||||||| ||||||    
T  36361909 aaagagaaagtgtgcttgtgtggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaggatgtattgccacctaagggtgtctatgtatcat 36362008  T
Q  124 tactct 129  Q
    ||||||    
T  36362009 tactct 36362014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 24 - 129
Target Start/End: Complemental strand, 3434666 - 3434561
Alignment:
Q  24 aaagagaaagtgtgattgtatgggatccacatgatcacgtgtcagatttttgtgtaggtgtcaatggatgtattaccacctaaggatgtctatatatcat 123  Q
    |||||||||||||| ||||  ||||||||| |||  ||||||||| ||||||||| |||||||| || |||||| |||||||||||||||||| ||||||    
T  3434666 aaagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagttttttgtgtgggtgtcaaagggtgtattgccacctaaggatgtctatgtatcat 3434567  T
Q  124 tactct 129  Q
    ||||||    
T  3434566 tactct 3434561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 24 - 128
Target Start/End: Complemental strand, 19329946 - 19329842
Alignment:
Q  24 aaagagaaagtgtgattgtatgggatccacatgatcacgtgtcagatttttgtgtaggtgtcaatggatgtattaccacctaaggatgtctatatatcat 123  Q
    |||||||||||||| ||||  ||| ||||| |||| ||||||||||||||||||| ||||||||  | |||||| |||||||||||||||||| ||||||    
T  19329946 aaagagaaagtgtgcttgtgcggggtccacgtgattacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccacctaaggatgtctatgtatcat 19329847  T
Q  124 tactc 128  Q
    |||||    
T  19329846 tactc 19329842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 24 - 130
Target Start/End: Original strand, 8080379 - 8080485
Alignment:
Q  24 aaagagaaagtgtgattgtatgggatccacatgatcacgtgtcagatttttgtgtaggtgtcaatggatgtattaccacctaaggatgtctatatatcat 123  Q
    |||||||||||||| ||||  ||| ||||| |||  ||||||||||||||| |||||||||||| || |||||| |||||||||| ||||||| ||||||    
T  8080379 aaagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttatgtaggtgtcaaagggtgtattgccacctaagggtgtctatgtatcat 8080478  T
Q  124 tactctt 130  Q
    |||||||    
T  8080479 tactctt 8080485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 24 - 125
Target Start/End: Complemental strand, 3784099 - 3783998
Alignment:
Q  24 aaagagaaagtgtgattgtatgggatccacatgatcacgtgtcagatttttgtgtaggtgtcaatggatgtattaccacctaaggatgtctatatatcat 123  Q
    |||||||||||||| ||||  ||||||||| |||  ||||||||||||||||||| ||||||||  |||||||| |||||||||| ||||||| ||||||    
T  3784099 aaagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaaagatgtattgccacctaagggtgtctatgtatcat 3784000  T
Q  124 ta 125  Q
    ||    
T  3783999 ta 3783998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 24 - 131
Target Start/End: Complemental strand, 7389493 - 7389386
Alignment:
Q  24 aaagagaaagtgtgattgtatgggatccacatgatcacgtgtcagatttttgtgtaggtgtcaatggatgtattaccacctaaggatgtctatatatcat 123  Q
    |||||||||||||| ||||  ||| ||||| |||  ||||||||||||||||||| |||||||| |  |||||| |||||||||| ||||||| ||||||    
T  7389493 aaagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagagtgtattgccacctaagggtgtctatgtatcat 7389394  T
Q  124 tactctta 131  Q
    ||||||||    
T  7389393 tactctta 7389386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 24 - 130
Target Start/End: Original strand, 19436183 - 19436289
Alignment:
Q  24 aaagagaaagtgtgattgtatgggatccacatgatcacgtgtcagatttttgtgtaggtgtcaatggatgtattaccacctaaggatgtctatatatcat 123  Q
    |||||||||||||| || |  ||||||||| |||  ||||||||||||||||||| ||||||||  | ||||||  ||||||||||||||||| ||||||    
T  19436183 aaagagaaagtgtgcttatgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgtcacctaaggatgtctatgtatcat 19436282  T
Q  124 tactctt 130  Q
    |||||||    
T  19436283 tactctt 19436289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 24 - 130
Target Start/End: Complemental strand, 38837321 - 38837215
Alignment:
Q  24 aaagagaaagtgtgattgtatgggatccacatgatcacgtgtcagatttttgtgtaggtgtcaatggatgtattaccacctaaggatgtctatatatcat 123  Q
    |||||||||||||| ||||  ||| ||||| |||  |||||||||||||||||||||||||  | || |||||| |||||||||| ||||||| ||||||    
T  38837321 aaagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtaggtgtacaagggtgtattgccacctaagggtgtctatgtatcat 38837222  T
Q  124 tactctt 130  Q
    |||||||    
T  38837221 tactctt 38837215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 24 - 130
Target Start/End: Complemental strand, 40957811 - 40957705
Alignment:
Q  24 aaagagaaagtgtgattgtatgggatccacatgatcacgtgtcagatttttgtgtaggtgtcaatggatgtattaccacctaaggatgtctatatatcat 123  Q
    |||||||||||||| ||||| ||||||||| |||  ||||||||||||||||||| ||| |||| |  |||||| |||||||||  ||||||| ||||||    
T  40957811 aaagagaaagtgtgcttgtacgggatccacgtgactacgtgtcagatttttgtgtgggtatcaaagagtgtattgccacctaagagtgtctatgtatcat 40957712  T
Q  124 tactctt 130  Q
    |||||||    
T  40957711 tactctt 40957705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 24 - 128
Target Start/End: Complemental strand, 35137637 - 35137533
Alignment:
Q  24 aaagagaaagtgtgattgtatgggatccacatgatcacgtgtcagatttttgtgtaggtgtcaatggatgtattaccacctaaggatgtctatatatcat 123  Q
    |||||||||||||| ||||  ||| ||||| |||  |||||| |||||||||||| |||||||| || |||||| |||||||||| ||||||| ||||||    
T  35137637 aaagagaaagtgtgtttgtgcggggtccacgtgactacgtgttagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatttatcat 35137538  T
Q  124 tactc 128  Q
    |||||    
T  35137537 tactc 35137533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 23 - 131
Target Start/End: Complemental strand, 36208278 - 36208170
Alignment:
Q  23 gaaagagaaagtgtgattgtatgggatccacatgatcacgtgtcagatttttgtgtaggtgtcaatggatgtattaccacctaaggatgtctatatatca 122  Q
    |||||||||| |||| ||||   || ||||| ||| ||| |||||| ||||||||| |||||||||| |||||||||||||||||| ||||||| |||||    
T  36208278 gaaagagaaaatgtgcttgtgcagggtccacgtgaccacatgtcagctttttgtgtgggtgtcaatgaatgtattaccacctaagggtgtctatgtatca 36208179  T
Q  123 ttactctta 131  Q
    | |||||||    
T  36208178 taactctta 36208170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 14 - 130
Target Start/End: Complemental strand, 45223156 - 45223040
Alignment:
Q  14 agatgaaatgaaagagaaagtgtgattgtatgggatccacatgatcacgtgtcagatttttgtgtaggtgtcaatggatgtattaccacctaaggatgtc 113  Q
    |||||| |||||||||||| || | ||||||| | |  | ||||| ||||||||||||||||||||| |||  | | ||||||| ||||||||||||||     
T  45223156 agatgagatgaaagagaaaatgcgcttgtatgaggttaatatgattacgtgtcagatttttgtgtagatgttcaagaatgtattgccacctaaggatgta 45223057  T
Q  114 tatatatcattactctt 130  Q
    |||||||||||||||||    
T  45223056 tatatatcattactctt 45223040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 24 - 125
Target Start/End: Complemental strand, 3694471 - 3694370
Alignment:
Q  24 aaagagaaagtgtgattgtatgggatccacatgatcacgtgtcagatttttgtgtaggtgtcaatggatgtattaccacctaaggatgtctatatatcat 123  Q
    |||||||||||||| ||||  |||||||||||||  ||||||||||||||||||| ||||| ||  | ||||||  ||||||||| ||| ||||||||||    
T  3694471 aaagagaaagtgtgcttgtgcgggatccacatgactacgtgtcagatttttgtgtgggtgttaaaaggtgtattgtcacctaagggtgtgtatatatcat 3694372  T
Q  124 ta 125  Q
    ||    
T  3694371 ta 3694370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 24 - 128
Target Start/End: Complemental strand, 38267144 - 38267040
Alignment:
Q  24 aaagagaaagtgtgattgtatgggatccacatgatcacgtgtcagatttttgtgtaggtgtcaatggatgtattaccacctaaggatgtctatatatcat 123  Q
    |||||||||||||| ||||  ||| ||||| |||  ||||||||||||||||||| |||||||| || ||||||  ||| ||||| ||||||| ||||||    
T  38267144 aaagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgtcacataagggtgtctatgtatcat 38267045  T
Q  124 tactc 128  Q
    |||||    
T  38267044 tactc 38267040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 23 - 130
Target Start/End: Original strand, 35468850 - 35468957
Alignment:
Q  23 gaaagagaaagtgtgattgtatgggatccacatgatcacgtgtcagatttttgtgtaggtgtcaatggatgtattaccacctaaggatgtctatatatca 122  Q
    ||||||||||||||| ||||   || |||||||| |||| | | |||||||| ||| ||||||||  |||||||| ||| |||||||||||||| |||||    
T  35468850 gaaagagaaagtgtgtttgtgcagggtccacatggtcacatattagatttttatgtgggtgtcaaatgatgtattgccatctaaggatgtctatgtatca 35468949  T
Q  123 ttactctt 130  Q
    ||||||||    
T  35468950 ttactctt 35468957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 24 - 123
Target Start/End: Complemental strand, 35522980 - 35522881
Alignment:
Q  24 aaagagaaagtgtgattgtatgggatccacatgatcacgtgtcagatttttgtgtaggtgtcaatggatgtattaccacctaaggatgtctatatatcat 123  Q
    |||||||||||||| ||||  |||||||| |||  |||||||||||||||||||| ||||| ||  | |||||| |||| ||||||||||||| ||||||    
T  35522980 aaagagaaagtgtgcttgtgcgggatccatatggccacgtgtcagatttttgtgtgggtgttaaatggtgtattgccacttaaggatgtctatgtatcat 35522881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 21 - 128
Target Start/End: Complemental strand, 41423789 - 41423682
Alignment:
Q  21 atgaaagagaaagtgtgattgtatgggatccacatgatcacgtgtcagatttttgtgtaggtgtcaatggatgtattaccacctaaggatgtctatatat 120  Q
    |||||||||||| | || ||||| |||||| || ||| ||| ||||||||||||||||| |||||||  | |||||||||| |||| ||||||||| |||    
T  41423789 atgaaagagaaaatatgcttgtacgggatctacgtgaccacatgtcagatttttgtgtaagtgtcaagaggtgtattaccatctaatgatgtctatgtat 41423690  T
Q  121 cattactc 128  Q
    ||| ||||    
T  41423689 cataactc 41423682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 23 - 129
Target Start/End: Complemental strand, 22343466 - 22343360
Alignment:
Q  23 gaaagagaaagtgtgattgtatgggatccacatgatcacgtgtcagatttttgtgtaggtgtcaatggatgtattaccacctaaggatgtctatatatca 122  Q
    ||||||||||||||  ||||  ||| |||| ||| |||| |||||||||||||||| |||||||| || |||||| |||||||||| ||| ||| |||||    
T  22343466 gaaagagaaagtgtacttgtgcggggtccatatggtcacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaagggtgtttatgtatca 22343367  T
Q  123 ttactct 129  Q
    | |||||    
T  22343366 taactct 22343360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 23 - 129
Target Start/End: Complemental strand, 41915846 - 41915740
Alignment:
Q  23 gaaagagaaagtgtgattgtatgggatccacatgatcacgtgtcagatttttgtgtaggtgtcaatggatgtattaccacctaaggatgtctatatatca 122  Q
    ||||||||||||||  ||||  ||| |||| |||  ||| ||||||||||||||||||||||||| || |||||| |||||||||| ||| ||| |||||    
T  41915846 gaaagagaaagtgtacttgtgcggggtccatatggccacatgtcagatttttgtgtaggtgtcaaggggtgtattgccacctaagggtgtttatgtatca 41915747  T
Q  123 ttactct 129  Q
    | |||||    
T  41915746 taactct 41915740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 24 - 128
Target Start/End: Original strand, 4999510 - 4999614
Alignment:
Q  24 aaagagaaagtgtgattgtatgggatccacatgatcacgtgtcagatttttgtgtaggtgtcaatggatgtattaccacctaaggatgtctatatatcat 123  Q
    |||||||||||||| ||||  ||| ||||| |||  |||| |||||||||||||| ||||||||  | |||||| ||| |||||| ||||||| ||||||    
T  4999510 aaagagaaagtgtgtttgtgcggggtccacgtgactacgtatcagatttttgtgtgggtgtcaaaaggtgtattgccatctaagggtgtctatgtatcat 4999609  T
Q  124 tactc 128  Q
    |||||    
T  4999610 tactc 4999614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 21 - 97
Target Start/End: Original strand, 16374817 - 16374893
Alignment:
Q  21 atgaaagagaaagtgtgattgtatgggatccacatgatcacgtgtcagatttttgtgtaggtgtcaatggatgtatt 97  Q
    ||||||||||| ||||| |||| || ||||||| ||| |||||||||||||||||||| | |||||| |||||||||    
T  16374817 atgaaagagaatgtgtgcttgtgtgagatccacgtgaccacgtgtcagatttttgtgtggatgtcaagggatgtatt 16374893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 21 - 130
Target Start/End: Complemental strand, 18207286 - 18207178
Alignment:
Q  21 atgaaagagaaagtgtgattgtatgggatccacatgatcacgtgtcagatttttgtgtaggtgtcaatggatgtattaccacctaaggatgtctatatat 120  Q
    ||||||||||||||||| |||| |||| | ||| ||  ||||||| |||||||||| | ||||||||  | |||||| |||||||||| ||||||| |||    
T  18207286 atgaaagagaaagtgtgcttgtgtggggttcacgtg-ccacgtgttagatttttgtatgggtgtcaagaggtgtattgccacctaaggttgtctatgtat 18207188  T
Q  121 cattactctt 130  Q
    ||| ||||||    
T  18207187 cataactctt 18207178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 59 - 128
Target Start/End: Original strand, 46374833 - 46374902
Alignment:
Q  59 cacgtgtcagatttttgtgtaggtgtcaatggatgtattaccacctaaggatgtctatatatcattactc 128  Q
    |||||||||||||||||||| ||||| || || ||| || |||||||||||||||||| |||||| ||||    
T  46374833 cacgtgtcagatttttgtgtgggtgttaaagggtgtgttgccacctaaggatgtctatgtatcataactc 46374902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 62 - 130
Target Start/End: Original strand, 10343597 - 10343665
Alignment:
Q  62 gtgtcagatttttgtgtaggtgtcaatggatgtattaccacctaaggatgtctatatatcattactctt 130  Q
    ||||||||||||||||| ||||||||    |||||| |||||||||| ||||||| |||||||||||||    
T  10343597 gtgtcagatttttgtgtgggtgtcaagatgtgtatttccacctaagggtgtctatgtatcattactctt 10343665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 80 - 130
Target Start/End: Complemental strand, 11044236 - 11044186
Alignment:
Q  80 ggtgtcaatggatgtattaccacctaaggatgtctatatatcattactctt 130  Q
    |||||||| ||||||||| |||||||||| ||||||| |||||||||||||    
T  11044236 ggtgtcaaaggatgtattgccacctaagggtgtctatgtatcattactctt 11044186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 63 - 128
Target Start/End: Original strand, 32564461 - 32564526
Alignment:
Q  63 tgtcagatttttgtgtaggtgtcaatggatgtattaccacctaaggatgtctatatatcattactc 128  Q
    |||||||||||||||| |||||||| || |||||| ||||||||| |||| ||| |||||| ||||    
T  32564461 tgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaagaatgtttatgtatcataactc 32564526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 60 - 128
Target Start/End: Complemental strand, 21234469 - 21234401
Alignment:
Q  60 acgtgtcagatttttgtgtaggtgtcaatggatgtattaccacctaaggatgtctatatatcattactc 128  Q
    |||||||| ||||||||||  ||||||| || ||||||  ||||||||||||||||| |||||| ||||    
T  21234469 acgtgtcaaatttttgtgtgagtgtcaaagggtgtattgtcacctaaggatgtctatgtatcataactc 21234401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 24 - 127
Target Start/End: Original strand, 32951489 - 32951592
Alignment:
Q  24 aaagagaaagtgtgattgtatgggatccacatgatcacgtgtcagatttttgtgtaggtgtcaatggatgtattaccacctaaggatgtctatatatcat 123  Q
    |||||||||||||| ||||  ||| ||||| |||  |||||| |||||||||||| | ||| || |||||||||  || |||||  ||||||| ||||||    
T  32951489 aaagagaaagtgtgcttgtgcggggtccacgtgactacgtgttagatttttgtgtggatgttaaaggatgtattgtcatctaagagtgtctatgtatcat 32951588  T
Q  124 tact 127  Q
    ||||    
T  32951589 tact 32951592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 63 - 130
Target Start/End: Complemental strand, 38044262 - 38044195
Alignment:
Q  63 tgtcagatttttgtgtaggtgtcaatggatgtattaccacctaaggatgtctatatatcattactctt 130  Q
    |||||||||||||||| | |||||| || |||||| |||||||||| ||| ||| |||||| ||||||    
T  38044262 tgtcagatttttgtgtggatgtcaaggggtgtattgccacctaagggtgtttatgtatcataactctt 38044195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 21 - 128
Target Start/End: Original strand, 39255917 - 39256023
Alignment:
Q  21 atgaaagagaaagtgtgattgtatgggatccacatgatcacgtgtcagatttttgtgtaggtgtcaatggatgtattaccacctaaggatgtctatatat 120  Q
    ||||||||||||||||  |||| |||  ||||| ||  |||||||||||||||||| | ||| ||||  | |||||| |||||||||| ||||||| |||    
T  39255917 atgaaagagaaagtgttcttgtgtggagtccacgtgc-cacgtgtcagatttttgtatgggtatcaagtggtgtattgccacctaaggttgtctatgtat 39256015  T
Q  121 cattactc 128  Q
    ||| ||||    
T  39256016 cataactc 39256023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 23 - 105
Target Start/End: Complemental strand, 8238318 - 8238236
Alignment:
Q  23 gaaagagaaagtgtgattgtatgggatccacatgatcacgtgtcagatttttgtgtaggtgtcaatggatgtattaccaccta 105  Q
    ||||||||||||||  ||||  ||| |||| ||||  || |||||||||||||||| |||||||| || |||||| |||||||    
T  8238318 gaaagagaaagtgtacttgtgcggggtccatatgactacatgtcagatttttgtgtgggtgtcaaagggtgtattgccaccta 8238236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 59 - 129
Target Start/End: Original strand, 46033832 - 46033902
Alignment:
Q  59 cacgtgtcagatttttgtgtaggtgtcaatggatgtattaccacctaaggatgtctatatatcattactct 129  Q
    |||||||||||||||| ||| ||||| || || |||||| ||||||||| || ||||| |||||| |||||    
T  46033832 cacgtgtcagatttttatgtgggtgttaaagggtgtattgccacctaagaatatctatgtatcataactct 46033902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 67 - 128
Target Start/End: Original strand, 40846152 - 40846213
Alignment:
Q  67 agatttttgtgtaggtgtcaatggatgtattaccacctaaggatgtctatatatcattactc 128  Q
    |||||||||||| | |||||| || |||||| |||||||||||||| ||| |||||| ||||    
T  40846152 agatttttgtgtggatgtcaaggggtgtattgccacctaaggatgtttatgtatcataactc 40846213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 63; Significance: 3e-27; HSPs: 33)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 24 - 130
Target Start/End: Complemental strand, 49607518 - 49607412
Alignment:
Q  24 aaagagaaagtgtgattgtatgggatccacatgatcacgtgtcagatttttgtgtaggtgtcaatggatgtattaccacctaaggatgtctatatatcat 123  Q
    |||||||||||||| |||| |||||||||| |||  ||||||||||||||||||| |||||||| || |||||| |||||||||| ||||||| ||||||    
T  49607518 aaagagaaagtgtgcttgtgtgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcat 49607419  T
Q  124 tactctt 130  Q
    |||||||    
T  49607418 tactctt 49607412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 21 - 128
Target Start/End: Original strand, 14623832 - 14623939
Alignment:
Q  21 atgaaagagaaagtgtgattgtatgggatccacatgatcacgtgtcagatttttgtgtaggtgtcaatggatgtattaccacctaaggatgtctatatat 120  Q
    ||||||||||||||||| |||| || | ||||||||| ||| |||||||||||| ||| |||||||| || |||||| |||||||||||||||||| |||    
T  14623832 atgaaagagaaagtgtgcttgtgtgaggtccacatgaacacatgtcagatttttatgtgggtgtcaaggggtgtattgccacctaaggatgtctatgtat 14623931  T
Q  121 cattactc 128  Q
    ||||||||    
T  14623932 cattactc 14623939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 21 - 127
Target Start/End: Original strand, 13898048 - 13898154
Alignment:
Q  21 atgaaagagaaagtgtgattgtatgggatccacatgatcacgtgtcagatttttgtgtaggtgtcaatggatgtattaccacctaaggatgtctatatat 120  Q
    ||||||||||||||||| |||| || | ||||||||| |||||||||||||||| ||| |||||||| || |||||| |||||||||||||| ||| |||    
T  13898048 atgaaagagaaagtgtgcttgtgtgaggtccacatgaacacgtgtcagatttttatgtgggtgtcaaggggtgtattgccacctaaggatgtttatctat 13898147  T
Q  121 cattact 127  Q
    |||||||    
T  13898148 cattact 13898154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 25 - 130
Target Start/End: Original strand, 27714888 - 27714993
Alignment:
Q  25 aagagaaagtgtgattgtatgggatccacatgatcacgtgtcagatttttgtgtaggtgtcaatggatgtattaccacctaaggatgtctatatatcatt 124  Q
    ||||||||||||| ||||  ||| |||||||||  ||||||||||||||||||| |||||||| || ||||||||||||||| | ||||||| |||||||    
T  27714888 aagagaaagtgtgcttgtgcggggtccacatgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattaccacctaaaggtgtctatgtatcatt 27714987  T
Q  125 actctt 130  Q
    ||||||    
T  27714988 actctt 27714993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 21 - 129
Target Start/End: Complemental strand, 8956869 - 8956761
Alignment:
Q  21 atgaaagagaaagtgtgattgtatgggatccacatgatcacgtgtcagatttttgtgtaggtgtcaatggatgtattaccacctaaggatgtctatatat 120  Q
    ||||||||| ||||||| |||| |  | ||||||||| ||||||||| |||||| ||| |||||||| ||||||||| |||| ||||||||||||| |||    
T  8956869 atgaaagaggaagtgtgcttgtgtaaggtccacatgaacacgtgtcacatttttatgtgggtgtcaaaggatgtattgccacataaggatgtctatgtat 8956770  T
Q  121 cattactct 129  Q
    |||||||||    
T  8956769 cattactct 8956761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 24 - 128
Target Start/End: Original strand, 26141528 - 26141632
Alignment:
Q  24 aaagagaaagtgtgattgtatgggatccacatgatcacgtgtcagatttttgtgtaggtgtcaatggatgtattaccacctaaggatgtctatatatcat 123  Q
    |||||||||||||| |||| |||| ||||  ||| |||||||||||||||||||| ||||| || || |||||| |||||||||||||||||| ||||||    
T  26141528 aaagagaaagtgtgcttgtgtggggtccatgtgaccacgtgtcagatttttgtgtgggtgttaaagggtgtattgccacctaaggatgtctatgtatcat 26141627  T
Q  124 tactc 128  Q
     ||||    
T  26141628 aactc 26141632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 24 - 128
Target Start/End: Complemental strand, 53982115 - 53982011
Alignment:
Q  24 aaagagaaagtgtgattgtatgggatccacatgatcacgtgtcagatttttgtgtaggtgtcaatggatgtattaccacctaaggatgtctatatatcat 123  Q
    |||||||||||||| ||||  ||| ||||| |||  ||||||||||||||||||| |||||||| || |||||| |||||||||| ||||||| ||||||    
T  53982115 aaagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcat 53982016  T
Q  124 tactc 128  Q
    |||||    
T  53982015 tactc 53982011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 24 - 123
Target Start/End: Complemental strand, 52629404 - 52629305
Alignment:
Q  24 aaagagaaagtgtgattgtatgggatccacatgatcacgtgtcagatttttgtgtaggtgtcaatggatgtattaccacctaaggatgtctatatatcat 123  Q
    |||||||||||||| ||||| ||| ||||| |||  ||||||||||||||||||| |||||||| || |||||| |||||||||| ||||||| ||||||    
T  52629404 aaagagaaagtgtgcttgtacggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcat 52629305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 24 - 131
Target Start/End: Original strand, 54868891 - 54868998
Alignment:
Q  24 aaagagaaagtgtgattgtatgggatccacatgatcacgtgtcagatttttgtgtaggtgtcaatggatgtattaccacctaaggatgtctatatatcat 123  Q
    |||||||||||||||||||  ||| ||||| | |  ||||||||||||||||||| ||||||||  | |||||| |||||||||| ||||||| ||||||    
T  54868891 aaagagaaagtgtgattgtgcggggtccacgtaactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccacctaagggtgtctatgtatcat 54868990  T
Q  124 tactctta 131  Q
    ||||||||    
T  54868991 tactctta 54868998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 24 - 128
Target Start/End: Complemental strand, 33644304 - 33644200
Alignment:
Q  24 aaagagaaagtgtgattgtatgggatccacatgatcacgtgtcagatttttgtgtaggtgtcaatggatgtattaccacctaaggatgtctatatatcat 123  Q
    |||||||||||||| ||||  ||| ||||| |||  ||||||||||||||||||| |||||||| || |||||| ||||| |||| ||||||| ||||||    
T  33644304 aaagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacccaagggtgtctatgtatcat 33644205  T
Q  124 tactc 128  Q
    |||||    
T  33644204 tactc 33644200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 60 - 131
Target Start/End: Original strand, 11095385 - 11095456
Alignment:
Q  60 acgtgtcagatttttgtgtaggtgtcaatggatgtattaccacctaaggatgtctatatatcattactctta 131  Q
    ||||||||||||||||||| |||||||| || |||||| |||||||||| ||||||| ||||||||||||||    
T  11095385 acgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactctta 11095456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 24 - 127
Target Start/End: Complemental strand, 31456793 - 31456690
Alignment:
Q  24 aaagagaaagtgtgattgtatgggatccacatgatcacgtgtcagatttttgtgtaggtgtcaatggatgtattaccacctaaggatgtctatatatcat 123  Q
    |||||||||||||| ||||  ||| |||||||||  ||||||||||||||||||| |||||||| || |||||| || |||| || ||||||| ||||||    
T  31456793 aaagagaaagtgtgcttgtgcggggtccacatgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccgcctatgggtgtctatgtatcat 31456694  T
Q  124 tact 127  Q
    ||||    
T  31456693 tact 31456690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 24 - 129
Target Start/End: Complemental strand, 17470509 - 17470404
Alignment:
Q  24 aaagagaaagtgtgattgtatgggatccacatgatcacgtgtcagatttttgtgtaggtgtcaatggatgtattaccacctaaggatgtctatatatcat 123  Q
    |||||||||||||| |||| |||| ||||| |||  ||||||||||||||||||| ||||| ||  | |||||| |||||||| | ||||||| ||||||    
T  17470509 aaagagaaagtgtgcttgtgtggggtccacgtgactacgtgtcagatttttgtgtgggtgttaaaaggtgtattgccacctaaaggtgtctatgtatcat 17470410  T
Q  124 tactct 129  Q
    ||||||    
T  17470409 tactct 17470404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 21 - 125
Target Start/End: Original strand, 25407140 - 25407245
Alignment:
Q  21 atgaaagagaaagtgtgattgtatgggatccacatgatcacgtgtcaga-tttttgtgtaggtgtcaatggatgtattaccacctaaggatgtctatata 119  Q
    ||||||||||||||||| |||| ||||||||| |||||||||||||||| |||||||||  ||||||| || | |||| ||||||| || ||| ||| ||    
T  25407140 atgaaagagaaagtgtgtttgtgtgggatccatatgatcacgtgtcagattttttgtgtgtgtgtcaaggggtatattgccacctatggttgtgtatgta 25407239  T
Q  120 tcatta 125  Q
    ||||||    
T  25407240 tcatta 25407245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 24 - 116
Target Start/End: Original strand, 20764911 - 20765003
Alignment:
Q  24 aaagagaaagtgtgattgtatgggatccacatgatcacgtgtcagatttttgtgtaggtgtcaatggatgtattaccacctaaggatgtctat 116  Q
    |||||||||||||| ||||| ||| ||||  ||  |||||||||||||||||||| ||||| || |  |||||||||||||||||||||||||    
T  20764911 aaagagaaagtgtgcttgtacggggtccatgtggccacgtgtcagatttttgtgtgggtgttaaagagtgtattaccacctaaggatgtctat 20765003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 23 - 131
Target Start/End: Original strand, 33118846 - 33118954
Alignment:
Q  23 gaaagagaaagtgtgattgtatgggatccacatgatcacgtgtcagatttttgtgtaggtgtcaatggatgtattaccacctaaggatgtctatatatca 122  Q
    ||||||||||||||| || |  ||||||||| |||  |||||||| |||||||||| |||||||| || ||||||  ||||||||| ||||||| |||||    
T  33118846 gaaagagaaagtgtgtttctgagggatccacgtgactacgtgtcaaatttttgtgtgggtgtcaaagggtgtattgtcacctaagggtgtctatgtatca 33118945  T
Q  123 ttactctta 131  Q
    | |||||||    
T  33118946 taactctta 33118954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 21 - 129
Target Start/End: Complemental strand, 35536733 - 35536625
Alignment:
Q  21 atgaaagagaaagtgtgattgtatgggatccacatgatcacgtgtcagatttttgtgtaggtgtcaatggatgtattaccacctaaggatgtctatatat 120  Q
    ||||||||| ||||||| |||| |  | ||||||||| ||||||||| |||||| ||| ||||||||  | |||||| |||| ||||||||||||| |||    
T  35536733 atgaaagaggaagtgtgcttgtgtaaggtccacatgaccacgtgtcacatttttatgtgggtgtcaaatggtgtattgccacataaggatgtctatgtat 35536634  T
Q  121 cattactct 129  Q
    |||||||||    
T  35536633 cattactct 35536625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 59 - 131
Target Start/End: Original strand, 35965805 - 35965877
Alignment:
Q  59 cacgtgtcagatttttgtgtaggtgtcaatggatgtattaccacctaaggatgtctatatatcattactctta 131  Q
    |||||||||||||||| ||| |||||||| |||||||||| ||| ||||||||| ||| ||||||||||||||    
T  35965805 cacgtgtcagatttttatgtgggtgtcaaaggatgtattatcacttaaggatgtatatgtatcattactctta 35965877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 24 - 124
Target Start/End: Original strand, 48587087 - 48587187
Alignment:
Q  24 aaagagaaagtgtgattgtatgggatccacatgatcacgtgtcagatttttgtgtaggtgtcaatggatgtattaccacctaaggatgtctatatatcat 123  Q
    |||||||||||||  ||||  ||||||||| |||  ||||||||||||||| |||||||||||| || |||||| |||||||||| | ||||| ||||||    
T  48587087 aaagagaaagtgtacttgtgcgggatccacgtgactacgtgtcagatttttatgtaggtgtcaaagggtgtattgccacctaagggtatctatgtatcat 48587186  T
Q  124 t 124  Q
    |    
T  48587187 t 48587187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 59 - 130
Target Start/End: Original strand, 11347953 - 11348024
Alignment:
Q  59 cacgtgtcagatttttgtgtaggtgtcaatggatgtattaccacctaaggatgtctatatatcattactctt 130  Q
    |||||||||||||||||||| | |||||| |||||||||  ||||||||||||||||| |||||| ||||||    
T  11347953 cacgtgtcagatttttgtgtggatgtcaaaggatgtattgtcacctaaggatgtctatgtatcataactctt 11348024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 23 - 129
Target Start/End: Original strand, 24699949 - 24700055
Alignment:
Q  23 gaaagagaaagtgtgattgtatgggatccacatgatcacgtgtcagatttttgtgtaggtgtcaatggatgtattaccacctaaggatgtctatatatca 122  Q
    ||||||||||||||| |||||  || ||||| ||  |||||| ||||||||| ||| ||||||||  | |||||| ||| |||||||||||||| |||||    
T  24699949 gaaagagaaagtgtgtttgtacagggtccacgtggccacgtgccagatttttatgtgggtgtcaaaaggtgtattgccaactaaggatgtctatgtatca 24700048  T
Q  123 ttactct 129  Q
    |||||||    
T  24700049 ttactct 24700055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 23 - 128
Target Start/End: Complemental strand, 8076498 - 8076393
Alignment:
Q  23 gaaagagaaagtgtgattgtatgggatccacatgatcacgtgtcagatttttgtgtaggtgtcaatggatgtattaccacctaaggatgtctatatatca 122  Q
    ||||||||||||||| ||||  ||| ||||| |||  |||||| |||||||||||| |||||||| || |||| | |||||||||| ||| ||| |||||    
T  8076498 gaaagagaaagtgtgcttgtgcggggtccacgtgactacgtgttagatttttgtgtgggtgtcaaagggtgtactgccacctaagggtgtttatgtatca 8076399  T
Q  123 ttactc 128  Q
    ||||||    
T  8076398 ttactc 8076393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 24 - 132
Target Start/End: Original strand, 41189760 - 41189868
Alignment:
Q  24 aaagagaaagtgtgattgtatgggatccacatgatcacgtgtcagatttttgtgtaggtgtcaatggatgtattaccacctaaggatgtctatatatcat 123  Q
    |||||||||||||| ||||  ||| ||||  ||  ||||||||| |||||| ||| ||||||||  |||||||| |||||||||||||| ||| ||||||    
T  41189760 aaagagaaagtgtgcttgtgcggggtccatgtggccacgtgtcaaatttttatgtgggtgtcaaatgatgtattgccacctaaggatgtatatgtatcat 41189859  T
Q  124 tactcttac 132  Q
     ||||||||    
T  41189860 aactcttac 41189868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 59 - 128
Target Start/End: Original strand, 51419391 - 51419460
Alignment:
Q  59 cacgtgtcagatttttgtgtaggtgtcaatggatgtattaccacctaaggatgtctatatatcattactc 128  Q
    |||||||||||||||||||| ||||| || |||||||||  || |||||||||||||| |||||| ||||    
T  51419391 cacgtgtcagatttttgtgtgggtgttaaaggatgtattgtcatctaaggatgtctatgtatcataactc 51419460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 14 - 129
Target Start/End: Original strand, 21746174 - 21746284
Alignment:
Q  14 agatgaaatgaaagagaaagtgtgattgtatgggatccacatgatcacgtgtcagatttttgtgtagg--tgtcaatggatgtattaccacctaaggatg 111  Q
    |||||| ||||||||||||||||| ||||||||| ||       | ||||||||||||||||||| ||  |||| | | ||||||| |||||||||||||    
T  21746174 agatgagatgaaagagaaagtgtgcttgtatggggtc-------ttacgtgtcagatttttgtgtgggggtgtccaggaatgtattgccacctaaggatg 21746266  T
Q  112 tctatatatcattactct 129  Q
    | ||| ||||||||||||    
T  21746267 tatatgtatcattactct 21746284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 24 - 116
Target Start/End: Complemental strand, 39670115 - 39670023
Alignment:
Q  24 aaagagaaagtgtgattgtatgggatccacatgatcacgtgtcagatttttgtgtaggtgtcaatggatgtattaccacctaaggatgtctat 116  Q
    |||||| |||||||  |||| | | ||||||||||||||||||| |||||| | ||| |||||| |||| |||| |||| |||||||||||||    
T  39670115 aaagaggaagtgtgcgtgtacgaggtccacatgatcacgtgtcaaatttttatatagatgtcaagggatatattgccacataaggatgtctat 39670023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 21 - 128
Target Start/End: Complemental strand, 41080814 - 41080709
Alignment:
Q  21 atgaaagagaaagtgtgattgtatgggatccacatgatcacgtgtcagatttttgtgtaggtgtcaatggatgtattaccacctaaggatgtctatatat 120  Q
    |||||||||||| |||| |||| |||| ||||||||| ||| | ||||||||||| || |||||||| || ||| || | || ||||||||||||| |||    
T  41080814 atgaaagagaaaatgtgcttgtgtggg-tccacatgaccacatatcagatttttgcgtgggtgtcaaagggtgttttgctac-taaggatgtctatgtat 41080717  T
Q  121 cattactc 128  Q
    ||||||||    
T  41080716 cattactc 41080709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 60 - 130
Target Start/End: Original strand, 36707456 - 36707526
Alignment:
Q  60 acgtgtcagatttttgtgtaggtgtcaatggatgtattaccacctaaggatgtctatatatcattactctt 130  Q
    ||||||||||||||||||| | |||||| || ||||||  ||||||||| | ||||| |||||||||||||    
T  36707456 acgtgtcagatttttgtgtggatgtcaaagggtgtattgtcacctaagggtatctatgtatcattactctt 36707526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 23 - 116
Target Start/End: Complemental strand, 26754800 - 26754707
Alignment:
Q  23 gaaagagaaagtgtgattgtatgggatccacatgatcacgtgtcagatttttgtgtaggtgtcaatggatgtattaccacctaaggatgtctat 116  Q
    |||||||||| |||| ||||  ||| ||||  ||| ||| |||||||||||||||| | |||| | || |||||| |||||||||| |||||||    
T  26754800 gaaagagaaaatgtgcttgtgcggggtccatgtgaccacatgtcagatttttgtgtggatgtccaagggtgtattgccacctaagggtgtctat 26754707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 25 - 130
Target Start/End: Complemental strand, 35093688 - 35093583
Alignment:
Q  25 aagagaaagtgtgattgtatgggatccacatgatcacgtgtcagatttttgtgtaggtgtcaatggatgtattaccacctaaggatgtctatatatcatt 124  Q
    ||||||||||||| ||||||||  | ||||||| ||| ||||||||||||| || | ||||||  | ||||||  ||||||| | ||||||| |||| |     
T  35093688 aagagaaagtgtgcttgtatggagttcacatgaccacatgtcagatttttgcgtggatgtcaaatgttgtattgtcacctaaagttgtctatgtatcgta 35093589  T
Q  125 actctt 130  Q
    ||||||    
T  35093588 actctt 35093583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 23 - 128
Target Start/End: Original strand, 45058548 - 45058652
Alignment:
Q  23 gaaagagaaagtgtgattgtatgggatccacatgatcacgtgtcagatttttgtgtaggtgtcaatggatgtattaccacctaaggatgtctatatatca 122  Q
    |||||||||||| |  ||||  ||| |||| ||| |||| |||||||||||| ||| |||||||| || |||||| |||||||||| ||| ||| |||||    
T  45058548 gaaagagaaagtatacttgtgcggggtccatatggtcacatgtcagatttttatgtgggtgtcaa-gggtgtattgccacctaagggtgtttatgtatca 45058646  T
Q  123 ttactc 128  Q
    | ||||    
T  45058647 taactc 45058652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 24 - 132
Target Start/End: Complemental strand, 11907475 - 11907367
Alignment:
Q  24 aaagagaaagtgtgattgtatgggatccacatgatcacgtgtcagatttttgtgtaggtgtcaatggatgtattaccacctaaggatgtctatatatcat 123  Q
    ||||||||| |||| ||||  ||| |||| |||| ||| ||||||||||||||||  ||||  | |  ||||||  ||||||||| ||||||| ||||||    
T  11907475 aaagagaaaatgtgcttgtgcggggtccatatgaccacatgtcagatttttgtgtgagtgttcaggtgtgtattgtcacctaagggtgtctatgtatcat 11907376  T
Q  124 tactcttac 132  Q
     ||||||||    
T  11907375 aactcttac 11907367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 24 - 128
Target Start/End: Complemental strand, 47531969 - 47531865
Alignment:
Q  24 aaagagaaagtgtgattgtatgggatccacatgatcacgtgtcagatttttgtgtaggtgtcaatggatgtattaccacctaaggatgtctatatatcat 123  Q
    |||||||||||||| ||||  ||| | || |||  ||||||||||||| |||||| | ||| ||  | |||||| ||| |||||||||||||| ||||||    
T  47531969 aaagagaaagtgtgcttgtgcggggttcatatggccacgtgtcagattcttgtgtggatgttaaaaggtgtattgccatctaaggatgtctatgtatcat 47531870  T
Q  124 tactc 128  Q
     ||||    
T  47531869 aactc 47531865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 60; Significance: 2e-25; HSPs: 21)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 21 - 128
Target Start/End: Original strand, 31953023 - 31953130
Alignment:
Q  21 atgaaagagaaagtgtgattgtatgggatccacatgatcacgtgtcagatttttgtgtaggtgtcaatggatgtattaccacctaaggatgtctatatat 120  Q
    ||||||||||||||||| |||| || | ||||||||| ||| |||||||||||| ||| |||||||| || |||||| |||||||||||||||||| |||    
T  31953023 atgaaagagaaagtgtgtttgtgtgaggtccacatgaacacatgtcagatttttatgtgggtgtcaaggggtgtattgccacctaaggatgtctatctat 31953122  T
Q  121 cattactc 128  Q
    ||||||||    
T  31953123 cattactc 31953130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 24 - 130
Target Start/End: Original strand, 23128123 - 23128229
Alignment:
Q  24 aaagagaaagtgtgattgtatgggatccacatgatcacgtgtcagatttttgtgtaggtgtcaatggatgtattaccacctaaggatgtctatatatcat 123  Q
    |||||||||||||| |||| |||||||||| |||  ||||||||||||||||||| |||||||| |||||||||| ||| ||| | ||||||||||||||    
T  23128123 aaagagaaagtgtgcttgtgtgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaaggatgtattatcacataaaggtgtctatatatcat 23128222  T
Q  124 tactctt 130  Q
    || ||||    
T  23128223 tattctt 23128229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 24 - 129
Target Start/End: Complemental strand, 11427722 - 11427615
Alignment:
Q  24 aaagagaaagtgtgattgtatgggatccacatgatcacgtgtcagatttttgtgtaggtgtcaatggatgtattaccaccta--aggatgtctatatatc 121  Q
    |||||||||||||| ||||  ||||||||| |||  ||||||||||||||||||| |||||||| ||||||||| |||||||  ||| ||||||| ||||    
T  11427722 aaagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaaggatgtattgccacctaagagggtgtctatgtatc 11427623  T
Q  122 attactct 129  Q
    ||||||||    
T  11427622 attactct 11427615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 24 - 128
Target Start/End: Complemental strand, 17598658 - 17598554
Alignment:
Q  24 aaagagaaagtgtgattgtatgggatccacatgatcacgtgtcagatttttgtgtaggtgtcaatggatgtattaccacctaaggatgtctatatatcat 123  Q
    |||||||||||||| ||||  ||| ||||| |||  ||||||||||||||||||| ||||||||  |||||||| |||||||||| ||||||| ||||||    
T  17598658 aaagagaaagtgtgcttgtgcggggtccacgtgacaacgtgtcagatttttgtgtgggtgtcaaaagatgtattgccacctaagggtgtctatgtatcat 17598559  T
Q  124 tactc 128  Q
    |||||    
T  17598558 tactc 17598554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 21 - 130
Target Start/End: Complemental strand, 12732589 - 12732480
Alignment:
Q  21 atgaaagagaaagtgtgattgtatgggatccacatgatcacgtgtcagatttttgtgtaggtgtcaatggatgtattaccacctaaggatgtctatatat 120  Q
    |||||||||||| |||| || | ||||||||||||   |||||||||||||||||||| ||||||||||  | |||| |||| |||| |||||||| |||    
T  12732589 atgaaagagaaaatgtgcttatgtgggatccacatagccacgtgtcagatttttgtgtgggtgtcaatgattatattgccacttaagaatgtctatgtat 12732490  T
Q  121 cattactctt 130  Q
    ||||||||||    
T  12732489 cattactctt 12732480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 24 - 124
Target Start/End: Original strand, 28536484 - 28536582
Alignment:
Q  24 aaagagaaagtgtgattgtatgggatccacatgatcacgtgtcagatttttgtgtaggtgtcaatggatgtattaccacctaaggatgtctatatatcat 123  Q
    |||||||||||||| |||| |||| ||||||||| |  ||||||||||||||||| |||||||| || |||||| |||||||||||||| ||| ||||||    
T  28536484 aaagagaaagtgtgcttgtgtggggtccacatgacc--gtgtcagatttttgtgtgggtgtcaagggttgtattgccacctaaggatgtttatgtatcat 28536581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 24 - 128
Target Start/End: Complemental strand, 32869782 - 32869678
Alignment:
Q  24 aaagagaaagtgtgattgtatgggatccacatgatcacgtgtcagatttttgtgtaggtgtcaatggatgtattaccacctaaggatgtctatatatcat 123  Q
    |||||||||||||| ||||  ||| ||||| |||  ||||||||||||||||||| |||||||| || |||||| |||||||||| ||||||| |||| |    
T  32869782 aaagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatctt 32869683  T
Q  124 tactc 128  Q
    |||||    
T  32869682 tactc 32869678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 21 - 123
Target Start/End: Original strand, 9379705 - 9379807
Alignment:
Q  21 atgaaagagaaagtgtgattgtatgggatccacatgatcacgtgtcagatttttgtgtaggtgtcaatggatgtattaccacctaaggatgtctatatat 120  Q
    |||||||||||| |||| |||| || ||||||||||  ||||||||| |||||||| | |||||||| |||||||||  || |||||||||||||| |||    
T  9379705 atgaaagagaaaatgtgtttgtgtgagatccacatggccacgtgtcaaatttttgtatgggtgtcaagggatgtattgtcatctaaggatgtctatgtat 9379804  T
Q  121 cat 123  Q
    |||    
T  9379805 cat 9379807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 24 - 125
Target Start/End: Original strand, 22880654 - 22880755
Alignment:
Q  24 aaagagaaagtgtgattgtatgggatccacatgatcacgtgtcagatttttgtgtaggtgtcaatggatgtattaccacctaaggatgtctatatatcat 123  Q
    |||||||||||||| ||||  ||| ||||| |||  |||||||||| |||||||| |||||||| || |||||| |||||||||| ||||||| ||||||    
T  22880654 aaagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagaattttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcat 22880753  T
Q  124 ta 125  Q
    ||    
T  22880754 ta 22880755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 62 - 127
Target Start/End: Complemental strand, 946442 - 946377
Alignment:
Q  62 gtgtcagatttttgtgtaggtgtcaatggatgtattaccacctaaggatgtctatatatcattact 127  Q
    |||||||||||||| ||||||||||| || ||||||| ||||||||||||||||| |||| |||||    
T  946442 gtgtcagatttttgggtaggtgtcaaagggtgtattatcacctaaggatgtctatgtatcgttact 946377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 24 - 129
Target Start/End: Complemental strand, 31976352 - 31976247
Alignment:
Q  24 aaagagaaagtgtgattgtatgggatccacatgatcacgtgtcagatttttgtgtaggtgtcaatggatgtattaccacctaaggatgtctatatatcat 123  Q
    |||||||||||||| ||||  ||| | ||  ||| |||||||||||||||||||| ||||| || || | |||| |||||||||||||||||| ||||||    
T  31976352 aaagagaaagtgtgcttgtgcggggttcatgtgaccacgtgtcagatttttgtgtgggtgttaaagggtatattgccacctaaggatgtctatgtatcat 31976253  T
Q  124 tactct 129  Q
     |||||    
T  31976252 aactct 31976247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 23 - 131
Target Start/End: Original strand, 15990037 - 15990145
Alignment:
Q  23 gaaagagaaagtgtgattgtatgggatccacatgatcacgtgtcagatttttgtgtaggtgtcaatggatgtattaccacctaaggatgtctatatatca 122  Q
    ||||||||||||||  ||||  ||| |||| |||  ||| |||||||||||||||| |||||||| || |||||| |||||||||| ||| ||| |||||    
T  15990037 gaaagagaaagtgtacttgtgcggggtccatatggccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaagggtgtttatgtatca 15990136  T
Q  123 ttactctta 131  Q
    | |||||||    
T  15990137 taactctta 15990145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 23 - 130
Target Start/End: Original strand, 30341355 - 30341462
Alignment:
Q  23 gaaagagaaagtgtgattgtatgggatccacatgatcacgtgtcagatttttgtgtaggtgtcaatggatgtattaccacctaaggatgtctatatatca 122  Q
    ||||||||||||||  ||||  ||| |||| |||  ||| |||||||||||||||| |||||||| || |||||| |||||||||| ||| ||| |||||    
T  30341355 gaaagagaaagtgtacttgtgcggggtccatatggccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaagggtgtttatgtatca 30341454  T
Q  123 ttactctt 130  Q
    | ||||||    
T  30341455 taactctt 30341462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 23 - 128
Target Start/End: Original strand, 15508019 - 15508124
Alignment:
Q  23 gaaagagaaagtgtgattgtatgggatccacatgatcacgtgtcagatttttgtgtaggtgtcaatggatgtattaccacctaaggatgtctatatatca 122  Q
    ||||||||||||||  ||||  ||| |||| |||  ||| |||||||||||||||| |||||||| || |||||| |||||||||| ||| ||| |||||    
T  15508019 gaaagagaaagtgtacttgtgcggggtccatatggccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaagggtgtttatgtatca 15508118  T
Q  123 ttactc 128  Q
    | ||||    
T  15508119 taactc 15508124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 60 - 128
Target Start/End: Original strand, 31109432 - 31109500
Alignment:
Q  60 acgtgtcagatttttgtgtaggtgtcaatggatgtattaccacctaaggatgtctatatatcattactc 128  Q
    ||||||||||||||||||| | |||||| || |||||| |||||||||| |||||||  ||||||||||    
T  31109432 acgtgtcagatttttgtgtggatgtcaaagggtgtattgccacctaagggtgtctattaatcattactc 31109500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 60 - 130
Target Start/End: Original strand, 31110793 - 31110861
Alignment:
Q  60 acgtgtcagatttttgtgtaggtgtcaatggatgtattaccacctaaggatgtctatatatcattactctt 130  Q
    ||||||||||||||||||   ||||||| || |||||| |||||||||||||||||| |||||| ||||||    
T  31110793 acgtgtcagatttttgtga--gtgtcaaagggtgtattgccacctaaggatgtctatgtatcataactctt 31110861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 24 - 130
Target Start/End: Original strand, 6209461 - 6209567
Alignment:
Q  24 aaagagaaagtgtgattgtatgggatccacatgatcacgtgtcagatttttgtgtaggtgtcaatggatgtattaccacctaaggatgtctatatatcat 123  Q
    |||||||||||||| | ||  ||| ||||| |||  ||||| |||||||||||||  |||||||    |||||| |||||||||| ||||||| ||||||    
T  6209461 aaagagaaagtgtgctagtgcggggtccacgtgactacgtgacagatttttgtgtgagtgtcaaatagtgtattgccacctaagggtgtctatgtatcat 6209560  T
Q  124 tactctt 130  Q
    |||||||    
T  6209561 tactctt 6209567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 23 - 112
Target Start/End: Complemental strand, 4231653 - 4231564
Alignment:
Q  23 gaaagagaaagtgtgattgtatgggatccacatgatcacgtgtcagatttttgtgtaggtgtcaatggatgtattaccacctaaggatgt 112  Q
    ||||||||||||||  ||||  ||| |||| |||  |||||||||||||||||||| |||| ||| || |||||| |||||||| |||||    
T  4231653 gaaagagaaagtgtacttgtgcggggtccatatggccacgtgtcagatttttgtgtgggtggcaaggggtgtattgccacctaatgatgt 4231564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 46 - 130
Target Start/End: Complemental strand, 15832659 - 15832575
Alignment:
Q  46 ggatccacatgatcacgtgtcagatttttgtgtaggtgtcaatggatgtattaccacctaaggatgtctatatatcattactctt 130  Q
    |||||||| |||  |||||||| |||||||||| ||||||||  ||| ||||  ||||||| | ||||||| |||||||||||||    
T  15832659 ggatccacgtgactacgtgtcaaatttttgtgtgggtgtcaaatgatttattgtcacctaaaggtgtctatgtatcattactctt 15832575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 24 - 128
Target Start/End: Complemental strand, 29857931 - 29857827
Alignment:
Q  24 aaagagaaagtgtgattgtatgggatccacatgatcacgtgtcagatttttgtgtaggtgtcaatggatgtattaccacctaaggatgtctatatatcat 123  Q
    |||||||||||||| || |  ||||||||| | |  ||||||||||||||||||| ||||| ||  | |||||| ||| |||| | ||||||| ||||||    
T  29857931 aaagagaaagtgtgcttatgcgggatccacgtaactacgtgtcagatttttgtgtgggtgttaaaaggtgtattgccatctaaaggtgtctatgtatcat 29857832  T
Q  124 tactc 128  Q
    |||||    
T  29857831 tactc 29857827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 63 - 129
Target Start/End: Original strand, 22422053 - 22422119
Alignment:
Q  63 tgtcagatttttgtgtaggtgtcaatggatgtattaccacctaaggatgtctatatatcattactct 129  Q
    ||||||| |||||| |  |||||||  ||| |||| |||||||||||||||||| ||||||||||||    
T  22422053 tgtcagaattttgtatgagtgtcaagagatctattgccacctaaggatgtctatgtatcattactct 22422119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 60; Significance: 2e-25; HSPs: 30)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 23 - 130
Target Start/End: Original strand, 50052423 - 50052530
Alignment:
Q  23 gaaagagaaagtgtgattgtatgggatccacatgatcacgtgtcagatttttgtgtaggtgtcaatggatgtattaccacctaaggatgtctatatatca 122  Q
    ||||||||||||||| ||||  ||| ||||| |||  ||||||||||||||||||| |||||||| || |||||| |||||||||||||||||| |||||    
T  50052423 gaaagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaaggatgtctatgtatca 50052522  T
Q  123 ttactctt 130  Q
    ||||||||    
T  50052523 ttactctt 50052530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 24 - 130
Target Start/End: Original strand, 480443 - 480549
Alignment:
Q  24 aaagagaaagtgtgattgtatgggatccacatgatcacgtgtcagatttttgtgtaggtgtcaatggatgtattaccacctaaggatgtctatatatcat 123  Q
    |||||||||||||| ||||| ||| ||||| |||  ||||||||||||||||||| |||||||| || ||||||  ||||||||| ||||||| ||||||    
T  480443 aaagagaaagtgtgcttgtacggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgtcacctaagggtgtctatgtatcat 480542  T
Q  124 tactctt 130  Q
    |||||||    
T  480543 tactctt 480549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 24 - 128
Target Start/End: Complemental strand, 6034148 - 6034044
Alignment:
Q  24 aaagagaaagtgtgattgtatgggatccacatgatcacgtgtcagatttttgtgtaggtgtcaatggatgtattaccacctaaggatgtctatatatcat 123  Q
    |||||||||||||| ||||  ||||||||| |||  || |||||||||||||||| |||||||| || |||||| |||||||||| ||||||| ||||||    
T  6034148 aaagagaaagtgtgcttgtgcgggatccacgtgactacatgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcat 6034049  T
Q  124 tactc 128  Q
    |||||    
T  6034048 tactc 6034044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 24 - 131
Target Start/End: Original strand, 48183045 - 48183152
Alignment:
Q  24 aaagagaaagtgtgattgtatgggatccacatgatcacgtgtcagatttttgtgtaggtgtcaatggatgtattaccacctaaggatgtctatatatcat 123  Q
    |||||||||||||| ||||  ||| ||||| |||  ||||||||||||||||||| |||||||| || |||||| |||| ||||| ||||||| ||||||    
T  48183045 aaagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacgtaagggtgtctatgtatcat 48183144  T
Q  124 tactctta 131  Q
    ||||||||    
T  48183145 tactctta 48183152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 24 - 130
Target Start/End: Original strand, 42044363 - 42044469
Alignment:
Q  24 aaagagaaagtgtgattgtatgggatccacatgatcacgtgtcagatttttgtgtaggtgtcaatggatgtattaccacctaaggatgtctatatatcat 123  Q
    |||||||||||||| ||||  ||| ||||| |||  ||||||||||||||||||| |||||  | ||||||||| |||||||||| ||||||| ||||||    
T  42044363 aaagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtacaaggatgtattgccacctaagggtgtctatgtatcat 42044462  T
Q  124 tactctt 130  Q
    |||||||    
T  42044463 tactctt 42044469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 23 - 128
Target Start/End: Original strand, 50526166 - 50526271
Alignment:
Q  23 gaaagagaaagtgtgattgtatgggatccacatgatcacgtgtcagatttttgtgtaggtgtcaatggatgtattaccacctaaggatgtctatatatca 122  Q
    |||| |||||| ||| ||||  || |||||| ||| |||||||||||||||||||| |||||||| || |||||| |||||||| ||||||||| |||||    
T  50526166 gaaatagaaagcgtgcttgtgcggaatccacgtgaccacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaaagatgtctatgtatca 50526265  T
Q  123 ttactc 128  Q
    ||||||    
T  50526266 ttactc 50526271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 24 - 128
Target Start/End: Original strand, 11511458 - 11511562
Alignment:
Q  24 aaagagaaagtgtgattgtatgggatccacatgatcacgtgtcagatttttgtgtaggtgtcaatggatgtattaccacctaaggatgtctatatatcat 123  Q
    |||||||||||||| ||||  ||| ||||| |||  ||||||||||||||| ||| |||||||| || |||||| |||||||||| ||||||| ||||||    
T  11511458 aaagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttatgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcat 11511557  T
Q  124 tactc 128  Q
    |||||    
T  11511558 tactc 11511562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 23 - 130
Target Start/End: Complemental strand, 29239991 - 29239884
Alignment:
Q  23 gaaagagaaagtgtgattgtatgggatccacatgatcacgtgtcagatttttgtgtaggtgtcaatggatgtattaccacctaaggatgtctatatatca 122  Q
    ||||||||||||||| |||| |||| ||||| |||  |||||| |||||||||||| | ||||||  | |||||| |||||||||| ||||||| |||||    
T  29239991 gaaagagaaagtgtgcttgtgtggggtccacgtgactacgtgttagatttttgtgtggatgtcaaatggtgtattgccacctaagggtgtctatgtatca 29239892  T
Q  123 ttactctt 130  Q
    ||||||||    
T  29239891 ttactctt 29239884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 61 - 128
Target Start/End: Complemental strand, 40574846 - 40574779
Alignment:
Q  61 cgtgtcagatttttgtgtaggtgtcaatggatgtattaccacctaaggatgtctatatatcattactc 128  Q
    |||||||||||||||||| |||||||| || ||||||||||||||||||||||||| |||||| ||||    
T  40574846 cgtgtcagatttttgtgtgggtgtcaaagggtgtattaccacctaaggatgtctatgtatcataactc 40574779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 45 - 131
Target Start/End: Original strand, 29547976 - 29548062
Alignment:
Q  45 gggatccacatgatcacgtgtcagatttttgtgtaggtgtcaatggatgtattaccacctaaggatgtctatatatcattactctta 131  Q
    |||||||| |||  ||| |||||||||||||||| |||||||| ||||||||| |||||||||||||| ||| |||||| |||||||    
T  29547976 gggatccatatggccacatgtcagatttttgtgtgggtgtcaagggatgtattgccacctaaggatgtttatgtatcataactctta 29548062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 21 - 131
Target Start/End: Complemental strand, 29977992 - 29977882
Alignment:
Q  21 atgaaagagaaagtgtgattgtatgggatccacatgatcacgtgtcagatttttgtgtaggtgtcaatggatgtattaccacctaaggatgtctatatat 120  Q
    ||||||||||||||||| |||| |||| |||| ||||  ||||||||||||||||||| ||||| || || |||||| ||||||| || | | ||| |||    
T  29977992 atgaaagagaaagtgtgcttgtgtggggtccatatgactacgtgtcagatttttgtgtgggtgttaaggggtgtattgccacctatggttctgtatgtat 29977893  T
Q  121 cattactctta 131  Q
    |||||||||||    
T  29977892 cattactctta 29977882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 23 - 128
Target Start/End: Complemental strand, 3481759 - 3481654
Alignment:
Q  23 gaaagagaaagtgtgattgtatgggatccacatgatcacgtgtcagatttttgtgtaggtgtcaatggatgtattaccacctaaggatgtctatatatca 122  Q
    ||||||||||||||| |||| |||| ||||| |||  | ||||||||||||||||| |||||||| |  |||||| |||||||| | ||||||| |||||    
T  3481759 gaaagagaaagtgtgcttgtgtggggtccacgtgactatgtgtcagatttttgtgtgggtgtcaaagagtgtattgccacctaaaggtgtctatgtatca 3481660  T
Q  123 ttactc 128  Q
    ||||||    
T  3481659 ttactc 3481654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 24 - 129
Target Start/End: Original strand, 29234241 - 29234346
Alignment:
Q  24 aaagagaaagtgtgattgtatgggatccacatgatcacgtgtcagatttttgtgtaggtgtcaatggatgtattaccacctaaggatgtctatatatcat 123  Q
    |||||||||||||| ||||  ||| ||||| |||  |||||||||||||||||| |||| |||| || |||||| ||| |||||| ||||||| ||||||    
T  29234241 aaagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgaaggtatcaaagggtgtattgccatctaagggtgtctatgtatcat 29234340  T
Q  124 tactct 129  Q
    ||||||    
T  29234341 tactct 29234346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 24 - 128
Target Start/End: Complemental strand, 41236451 - 41236347
Alignment:
Q  24 aaagagaaagtgtgattgtatgggatccacatgatcacgtgtcagatttttgtgtaggtgtcaatggatgtattaccacctaaggatgtctatatatcat 123  Q
    |||||||||||||| ||||  ||| ||||| |||  ||||||||||||||||||| | ||||||  | |||||| |||||||||| ||||||| ||||||    
T  41236451 aaagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtggatgtcaaaaggtgtattgccacctaagggtgtctatgtatcat 41236352  T
Q  124 tactc 128  Q
    |||||    
T  41236351 tactc 41236347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 24 - 131
Target Start/End: Complemental strand, 23608339 - 23608232
Alignment:
Q  24 aaagagaaagtgtgattgtatgggatccacatgatcacgtgtcagatttttgtgtaggtgtcaatggatgtattaccacctaaggatgtctatatatcat 123  Q
    |||||||||||||| |||| |||  | ||| |||  ||||||||||||||||||| ||||||||  | ||||||  || |||||| ||||||||||||||    
T  23608339 aaagagaaagtgtgcttgtgtggagttcacgtgactacgtgtcagatttttgtgtgggtgtcaaatggtgtattgtcatctaagggtgtctatatatcat 23608240  T
Q  124 tactctta 131  Q
    ||||||||    
T  23608239 tactctta 23608232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 63 - 128
Target Start/End: Original strand, 8343198 - 8343263
Alignment:
Q  63 tgtcagatttttgtgtaggtgtcaatggatgtattaccacctaaggatgtctatatatcattactc 128  Q
    |||||||||||| |||||||||||| ||||||||| |||||||||||||| ||| |||||| ||||    
T  8343198 tgtcagatttttatgtaggtgtcaaaggatgtattgccacctaaggatgtttatgtatcataactc 8343263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 63 - 131
Target Start/End: Complemental strand, 55475256 - 55475188
Alignment:
Q  63 tgtcagatttttgtgtaggtgtcaatggatgtattaccacctaaggatgtctatatatcattactctta 131  Q
    |||||||||||||||| |||||||| || |||||| |||||||||||||| ||| |||||| |||||||    
T  55475256 tgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaaggatgtttatgtatcataactctta 55475188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 24 - 130
Target Start/End: Original strand, 24995103 - 24995209
Alignment:
Q  24 aaagagaaagtgtgattgtatgggatccacatgatcacgtgtcagatttttgtgtaggtgtcaatggatgtattaccacctaaggatgtctatatatcat 123  Q
    ||||||||| |||| ||||  ||| ||||| |||  |||||||| |||||| ||| |||||||| || |||||| ||| |||||| |||| |||||||||    
T  24995103 aaagagaaaatgtgcttgtgcggggtccacgtgactacgtgtcaaatttttatgtgggtgtcaaagggtgtattgccatctaagggtgtccatatatcat 24995202  T
Q  124 tactctt 130  Q
    |||||||    
T  24995203 tactctt 24995209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 21 - 131
Target Start/End: Complemental strand, 47104651 - 47104541
Alignment:
Q  21 atgaaagagaaagtgtgattgtatgggatccacatgatcacgtgtcagatttttgtgtaggtgtcaatggatgtattaccacctaaggatgtctatatat 120  Q
    ||||||||||||||||| |||| |||| || | |  | ||||||||| |||||||||| |||||||  |  ||||||  || ||||| ||||||||||||    
T  47104651 atgaaagagaaagtgtgtttgtgtggggtcaataaaaccacgtgtcaaatttttgtgtgggtgtcagagagtgtattgtcatctaagaatgtctatatat 47104552  T
Q  121 cattactctta 131  Q
    |||||||||||    
T  47104551 cattactctta 47104541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 23 - 129
Target Start/End: Complemental strand, 47986313 - 47986207
Alignment:
Q  23 gaaagagaaagtgtgattgtatgggatccacatgatcacgtgtcagatttttgtgtaggtgtcaatggatgtattaccacctaaggatgtctatatatca 122  Q
    ||||||||||||||  ||||  ||| |||| |||  ||| |||||||||||||||| | |||||| ||||||||| |||||||||| ||| ||| |||||    
T  47986313 gaaagagaaagtgtacttgtgcggggtccatatggccacatgtcagatttttgtgtggatgtcaagggatgtattgccacctaagggtgtttatgtatca 47986214  T
Q  123 ttactct 129  Q
    | |||||    
T  47986213 taactct 47986207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 23 - 129
Target Start/End: Original strand, 50813887 - 50813993
Alignment:
Q  23 gaaagagaaagtgtgattgtatgggatccacatgatcacgtgtcagatttttgtgtaggtgtcaatggatgtattaccacctaaggatgtctatatatca 122  Q
    ||||||||||||||  ||||  ||| | || |||| ||| |||||||||||||||| |||||||| || ||||||||||||||||  ||| ||| |||||    
T  50813887 gaaagagaaagtgtacttgtgcggggttcatatgaccacatgtcagatttttgtgtgggtgtcaaggggtgtattaccacctaagagtgtttatgtatca 50813986  T
Q  123 ttactct 129  Q
    | |||||    
T  50813987 taactct 50813993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 24 - 128
Target Start/End: Original strand, 54473529 - 54473633
Alignment:
Q  24 aaagagaaagtgtgattgtatgggatccacatgatcacgtgtcagatttttgtgtaggtgtcaatggatgtattaccacctaaggatgtctatatatcat 123  Q
    ||||| |||||||| ||||  ||| ||||| |||  |||||| |||||||||||| ||||||||  | ||||||  ||||||||| ||||||| ||||||    
T  54473529 aaagataaagtgtgcttgtgcggggtccacgtgactacgtgttagatttttgtgtgggtgtcaaatggtgtattgtcacctaagggtgtctatgtatcat 54473628  T
Q  124 tactc 128  Q
    |||||    
T  54473629 tactc 54473633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 23 - 130
Target Start/End: Original strand, 19670711 - 19670818
Alignment:
Q  23 gaaagagaaagtgtgattgtatgggatccacatgatcacgtgtcagatttttgtgtaggtgtcaatggatgtattaccacctaaggatgtctatatatca 122  Q
    ||||||||||||||  ||||  ||| |||| |||  ||| ||||||||||||||||  ||||||| || |||||| |||||||||| ||| ||| |||||    
T  19670711 gaaagagaaagtgtacttgtgcggggtccatatggccacatgtcagatttttgtgtgagtgtcaaggggtgtattgccacctaagggtgtttatgtatca 19670810  T
Q  123 ttactctt 130  Q
    | ||||||    
T  19670811 taactctt 19670818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 62 - 128
Target Start/End: Complemental strand, 31910258 - 31910192
Alignment:
Q  62 gtgtcagatttttgtgtaggtgtcaatggatgtattaccacctaaggatgtctatatatcattactc 128  Q
    ||||||||||||||||| |||||||| |  ||||||  ||||||||||||||||| |||||| ||||    
T  31910258 gtgtcagatttttgtgtgggtgtcaaagagtgtattgtcacctaaggatgtctatgtatcataactc 31910192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 23 - 108
Target Start/End: Original strand, 17983738 - 17983823
Alignment:
Q  23 gaaagagaaagtgtgattgtatgggatccacatgatcacgtgtcagatttttgtgtaggtgtcaatggatgtattaccacctaagg 108  Q
    ||||||||||||||  ||||  ||| |||| |||  ||| |||||||||||||||| |||||||| || |||||| ||||||||||    
T  17983738 gaaagagaaagtgtacttgtgcggggtccatatggccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaagg 17983823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 16 - 84
Target Start/End: Original strand, 18769035 - 18769103
Alignment:
Q  16 atgaaatgaaagagaaagtgtgattgtatgggatccacatgatcacgtgtcagatttttgtgtaggtgt 84  Q
    |||| |||||||||||| |||| |||| ||||||  |||||| ||| |||||||||||||||| |||||    
T  18769035 atgagatgaaagagaaaatgtgtttgtgtgggatttacatgaccacatgtcagatttttgtgtgggtgt 18769103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 24 - 123
Target Start/End: Original strand, 53352562 - 53352660
Alignment:
Q  24 aaagagaaagtgtgattgtatgggatccacatgatcacgtgtcagatttttgtgtaggtgtcaatggatgtattaccacctaaggatgtctatatatcat 123  Q
    ||||||||||| || ||||  ||| ||||| | |  ||||||||||||||||||||||||| || | |||||||  ||||||||| ||||||| ||||||    
T  53352562 aaagagaaagtatgcttgtgcggggtccacttaactacgtgtcagatttttgtgtaggtgttaaagaatgtatt-gcacctaagggtgtctatgtatcat 53352660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 21 - 78
Target Start/End: Original strand, 28480261 - 28480318
Alignment:
Q  21 atgaaagagaaagtgtgattgtatgggatccacatgatcacgtgtcagatttttgtgt 78  Q
    ||||| ||||||||||| |||| |||| |||||||||  || ||||||||||||||||    
T  28480261 atgaaggagaaagtgtgtttgtgtggggtccacatgactacatgtcagatttttgtgt 28480318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 21 - 78
Target Start/End: Original strand, 28481136 - 28481193
Alignment:
Q  21 atgaaagagaaagtgtgattgtatgggatccacatgatcacgtgtcagatttttgtgt 78  Q
    ||||| ||||||||||| |||| |||| |||||||||  || ||||||||||||||||    
T  28481136 atgaaggagaaagtgtgtttgtgtggggtccacatgactacatgtcagatttttgtgt 28481193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 21 - 78
Target Start/End: Original strand, 28482011 - 28482068
Alignment:
Q  21 atgaaagagaaagtgtgattgtatgggatccacatgatcacgtgtcagatttttgtgt 78  Q
    ||||| ||||||||||| |||| |||| |||||||||  || ||||||||||||||||    
T  28482011 atgaaggagaaagtgtgtttgtgtggggtccacatgactacatgtcagatttttgtgt 28482068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 60; Significance: 2e-25; HSPs: 34)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 24 - 131
Target Start/End: Complemental strand, 9058584 - 9058477
Alignment:
Q  24 aaagagaaagtgtgattgtatgggatccacatgatcacgtgtcagatttttgtgtaggtgtcaatggatgtattaccacctaaggatgtctatatatcat 123  Q
    |||||||||||||| ||||  ||| |||||||||  ||||||||||||||||||| |||||||| || |||||| |||||||||| ||||||| ||||||    
T  9058584 aaagagaaagtgtgcttgtgcggggtccacatgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcat 9058485  T
Q  124 tactctta 131  Q
    ||||||||    
T  9058484 tactctta 9058477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 273 - 451
Target Start/End: Original strand, 42693847 - 42694025
Alignment:
Q  273 ggtggtggaaacttgaggacttgttcaccatcagtgcggaaaatttccttgagtactggtaagggactgattttgctcaatatatgtgtaggaagttcaa 372  Q
    ||||||||| |||||||||  ||||||||||| || || || ||||| ||||| || ||||| ||||| || ||||| | || || ||| || || | ||    
T  42693847 ggtggtggatacttgaggaactgttcaccatcggttcgaaagatttctttgagaacaggtaacggacttatcttgctaagtacatctgttggcagcttaa 42693946  T
Q  373 ttccaccttcaaataagtcacgcacttcatcgaagctatcaaactcatttggagtgaaattcaaatcaaagattacaga 451  Q
    ||||||| ||| | ||  || | |||||||| |||||||||||||||||||| |||||||| |||||||||||||||||    
T  42693947 ttccaccctcatacaatccatgaacttcatcaaagctatcaaactcatttggtgtgaaatttaaatcaaagattacaga 42694025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 24 - 129
Target Start/End: Original strand, 7465731 - 7465836
Alignment:
Q  24 aaagagaaagtgtgattgtatgggatccacatgatcacgtgtcagatttttgtgtaggtgtcaatggatgtattaccacctaaggatgtctatatatcat 123  Q
    |||||||||||||| |||| |||| ||||| |||  ||||||||||||||||||| |||||||| || |||||| ||| |||||| ||||||| ||||||    
T  7465731 aaagagaaagtgtgcttgtgtggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccatctaagggtgtctatgtatcat 7465830  T
Q  124 tactct 129  Q
    ||||||    
T  7465831 tactct 7465836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 24 - 128
Target Start/End: Complemental strand, 13438447 - 13438343
Alignment:
Q  24 aaagagaaagtgtgattgtatgggatccacatgatcacgtgtcagatttttgtgtaggtgtcaatggatgtattaccacctaaggatgtctatatatcat 123  Q
    |||||||||||||| ||||  ||| ||||| |||  ||||||||||||||||||| |||||||| |||||||||  ||||||||| ||||||| ||||||    
T  13438447 aaagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaggatgtattgtcacctaagggtgtctatgtatcat 13438348  T
Q  124 tactc 128  Q
    |||||    
T  13438347 tactc 13438343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 24 - 128
Target Start/End: Complemental strand, 17473124 - 17473020
Alignment:
Q  24 aaagagaaagtgtgattgtatgggatccacatgatcacgtgtcagatttttgtgtaggtgtcaatggatgtattaccacctaaggatgtctatatatcat 123  Q
    |||||||||||||| ||||  ||||||||| |||  ||||||||||||||||||| |||||||| || |||||| ||| |||||| ||||||| ||||||    
T  17473124 aaagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccatctaagggtgtctatgtatcat 17473025  T
Q  124 tactc 128  Q
    |||||    
T  17473024 tactc 17473020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 14 - 130
Target Start/End: Original strand, 33436086 - 33436202
Alignment:
Q  14 agatgaaatgaaagagaaagtgtgattgtatgggatccacatgatcacgtgtcagatttttgtgtaggtgtcaatggatgtattaccacctaaggatgtc 113  Q
    |||||| | ||||||||||||||| ||||  ||| ||||| |||  |||||| |||||||||||| |||||||| || |||||| |||||||||| ||||    
T  33436086 agatgagaggaaagagaaagtgtgcttgtgcggggtccacgtgactacgtgttagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtc 33436185  T
Q  114 tatatatcattactctt 130  Q
    ||| |||||||||||||    
T  33436186 tatgtatcattactctt 33436202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 23 - 130
Target Start/End: Complemental strand, 20700920 - 20700813
Alignment:
Q  23 gaaagagaaagtgtgattgtatgggatccacatgatcacgtgtcagatttttgtgtaggtgtcaatggatgtattaccacctaaggatgtctatatatca 122  Q
    ||||||||||||||| || |  ||| ||||| |||  |||||||||||||||||||||| ||||| || |||||| |||| ||||||||||||| |||||    
T  20700920 gaaagagaaagtgtgcttatgcggggtccacgtgactacgtgtcagatttttgtgtaggagtcaaagggtgtattgccacataaggatgtctatgtatca 20700821  T
Q  123 ttactctt 130  Q
    ||||||||    
T  20700820 ttactctt 20700813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 24 - 130
Target Start/End: Complemental strand, 30915567 - 30915461
Alignment:
Q  24 aaagagaaagtgtgattgtatgggatccacatgatcacgtgtcagatttttgtgtaggtgtcaatggatgtattaccacctaaggatgtctatatatcat 123  Q
    |||||||||||||| ||||| ||| ||||| |||  ||||||||||||||| ||| || ||||| || |||||| |||||||||| ||||||| ||||||    
T  30915567 aaagagaaagtgtgcttgtacggggtccacgtgactacgtgtcagatttttatgtgggggtcaaagggtgtattgccacctaagggtgtctatgtatcat 30915468  T
Q  124 tactctt 130  Q
    |||||||    
T  30915467 tactctt 30915461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 24 - 129
Target Start/End: Original strand, 5574484 - 5574589
Alignment:
Q  24 aaagagaaagtgtgattgtatgggatccacatgatcacgtgtcagatttttgtgtaggtgtcaatggatgtattaccacctaaggatgtctatatatcat 123  Q
    |||||||||||||| ||||  ||||||||| |||  ||||||||||||||| ||| |||||||| || |||||| |||||||||  ||||||| ||||||    
T  5574484 aaagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttatgtgggtgtcaaagggtgtattgccacctaagagtgtctatgtatcat 5574583  T
Q  124 tactct 129  Q
    ||||||    
T  5574584 tactct 5574589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 24 - 125
Target Start/End: Original strand, 19930816 - 19930917
Alignment:
Q  24 aaagagaaagtgtgattgtatgggatccacatgatcacgtgtcagatttttgtgtaggtgtcaatggatgtattaccacctaaggatgtctatatatcat 123  Q
    |||||||||||||| ||||  ||| |||||||||  ||||||||||||||||||| | |||||| || |||||| |||||||||| ||||||| ||||||    
T  19930816 aaagagaaagtgtgtttgtgcggggtccacatgactacgtgtcagatttttgtgtggatgtcaaagggtgtattgccacctaagggtgtctatgtatcat 19930915  T
Q  124 ta 125  Q
    ||    
T  19930916 ta 19930917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 24 - 125
Target Start/End: Complemental strand, 28863559 - 28863458
Alignment:
Q  24 aaagagaaagtgtgattgtatgggatccacatgatcacgtgtcagatttttgtgtaggtgtcaatggatgtattaccacctaaggatgtctatatatcat 123  Q
    |||||||||||||| ||||  ||| ||||| |||  ||||||||||||||||||| |||||||| || |||||| |||||||||| ||||||| ||||||    
T  28863559 aaagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcat 28863460  T
Q  124 ta 125  Q
    ||    
T  28863459 ta 28863458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 24 - 128
Target Start/End: Original strand, 40613898 - 40614002
Alignment:
Q  24 aaagagaaagtgtgattgtatgggatccacatgatcacgtgtcagatttttgtgtaggtgtcaatggatgtattaccacctaaggatgtctatatatcat 123  Q
    |||||||||||||| ||||  ||| ||||  ||  |||||||||||||||||||| |||||||| || |||||| |||||||||||||||||| ||||||    
T  40613898 aaagagaaagtgtgcttgtgcggggtccatgtggccacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaaggatgtctatgtatcat 40613997  T
Q  124 tactc 128  Q
     ||||    
T  40613998 aactc 40614002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 24 - 128
Target Start/End: Complemental strand, 40701582 - 40701478
Alignment:
Q  24 aaagagaaagtgtgattgtatgggatccacatgatcacgtgtcagatttttgtgtaggtgtcaatggatgtattaccacctaaggatgtctatatatcat 123  Q
    |||||||||||||||||||  ||| ||||| | |  ||||||||||||||||||| ||||||||  | |||||| |||||||||| ||||||| ||||||    
T  40701582 aaagagaaagtgtgattgtgcggggtccacgtaactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccacctaagggtgtctatgtatcat 40701483  T
Q  124 tactc 128  Q
    |||||    
T  40701482 tactc 40701478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 24 - 131
Target Start/End: Original strand, 10249378 - 10249485
Alignment:
Q  24 aaagagaaagtgtgattgtatgggatccacatgatcacgtgtcagatttttgtgtaggtgtcaatggatgtattaccacctaaggatgtctatatatcat 123  Q
    |||||||||||||| ||||  ||| ||||| |||  ||||||||||||||||||| ||||||||  | ||||||  ||||||||| ||||||| ||||||    
T  10249378 aaagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgtcacctaagggtgtctatgtatcat 10249477  T
Q  124 tactctta 131  Q
    ||||||||    
T  10249478 tactctta 10249485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 21 - 127
Target Start/End: Complemental strand, 41575245 - 41575138
Alignment:
Q  21 atgaaagagaaagtgtgattgtat-gggatccacatgatcacgtgtcagatttttgtgtaggtgtcaatggatgtattaccacctaaggatgtctatata 119  Q
    ||||||||||||||||| |||| | ||| ||||||||| ||| ||||| ||||||||||   |||||| || |||||||||| |||||||||||||| ||    
T  41575245 atgaaagagaaagtgtgcttgtgtaggggtccacatgaccacatgtcaaatttttgtgtgaatgtcaaagggtgtattaccatctaaggatgtctatgta 41575146  T
Q  120 tcattact 127  Q
    ||||||||    
T  41575145 tcattact 41575138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 23 - 128
Target Start/End: Complemental strand, 27864809 - 27864704
Alignment:
Q  23 gaaagagaaagtgtgattgtatgggatccacatgatcacgtgtcagatttttgtgtaggtgtcaatggatgtattaccacctaaggatgtctatatatca 122  Q
    ||||||||||||||| || |  ||| ||||| |||| ||||||||||||||||||| | |||||| || |||||| |||| ||||| ||||||| |||||    
T  27864809 gaaagagaaagtgtgcttttgcggggtccacgtgattacgtgtcagatttttgtgtggatgtcaaagggtgtattgccacataagggtgtctatgtatca 27864710  T
Q  123 ttactc 128  Q
    ||||||    
T  27864709 ttactc 27864704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 14 - 131
Target Start/End: Complemental strand, 17823902 - 17823781
Alignment:
Q  14 agatgaaatgaaagagaaagtgtgattgtatgggatccacatga----tcacgtgtcagatttttgtgtaggtgtcaatggatgtattaccacctaagga 109  Q
    |||||| ||||||||||||||||| ||||||||| |||| ||      | ||||||||||||||||||| |||||  | | ||||||| |||||||||||    
T  17823902 agatgagatgaaagagaaagtgtgcttgtatggggtccatatatatagttacgtgtcagatttttgtgtgggtgttcaggaatgtattgccacctaagga 17823803  T
Q  110 tgtctatatatcattactctta 131  Q
    ||| ||| ||||||||||||||    
T  17823802 tgtatatgtatcattactctta 17823781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 49 - 129
Target Start/End: Complemental strand, 33436290 - 33436210
Alignment:
Q  49 tccacatgatcacgtgtcagatttttgtgtaggtgtcaatggatgtattaccacctaaggatgtctatatatcattactct 129  Q
    |||||||| ||||||||||||||||| ||| ||||||||  | |||||| ||| |||||||||||||| ||||||||||||    
T  33436290 tccacatggtcacgtgtcagatttttatgtgggtgtcaaaaggtgtattgccatctaaggatgtctatgtatcattactct 33436210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 23 - 130
Target Start/End: Original strand, 45097730 - 45097837
Alignment:
Q  23 gaaagagaaagtgtgattgtatgggatccacatgatcacgtgtcagatttttgtgtaggtgtcaatggatgtattaccacctaaggatgtctatatatca 122  Q
    ||||||||||||||  ||||  ||| |||| |||  ||| |||||||||||||| | |||||||| ||||||||| |||||||||||||| ||| |||||    
T  45097730 gaaagagaaagtgtacttgtgcggggtccatatggccacatgtcagatttttgtatgggtgtcaagggatgtattgccacctaaggatgtttatgtatca 45097829  T
Q  123 ttactctt 130  Q
    | ||||||    
T  45097830 taactctt 45097837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 24 - 130
Target Start/End: Complemental strand, 42257297 - 42257191
Alignment:
Q  24 aaagagaaagtgtgattgtatgggatccacatgatcacgtgtcagatttttgtgtaggtgtcaatggatgtattaccacctaaggatgtctatatatcat 123  Q
    |||||||||||||| ||||  ||| ||||  ||  |||||||||||||||| ||| ||||||||  |||||||| |||||||| ||||||||| ||||||    
T  42257297 aaagagaaagtgtgcttgtgcggggtccatgtggccacgtgtcagatttttatgtgggtgtcaaatgatgtattgccacctaaagatgtctatgtatcat 42257198  T
Q  124 tactctt 130  Q
     ||||||    
T  42257197 aactctt 42257191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 60 - 129
Target Start/End: Complemental strand, 2533191 - 2533123
Alignment:
Q  60 acgtgtcagatttttgtgtaggtgtcaatggatgtattaccacctaaggatgtctatatatcattactct 129  Q
    ||||||||||||||||||| |||||||| ||||||||| |||| ||||||||||||| |||||| |||||    
T  2533191 acgtgtcagatttttgtgt-ggtgtcaaaggatgtattgccacttaaggatgtctatgtatcataactct 2533123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 28 - 129
Target Start/End: Original strand, 32505648 - 32505749
Alignment:
Q  28 agaaagtgtgattgtatgggatccacatgatcacgtgtcagatttttgtgtaggtgtcaatggatgtattaccacctaaggatgtctatatatcattact 127  Q
    |||||||||| ||||  ||| ||||| |||  ||||||||||||||||||| ||||||||  | ||||||  ||||||||| ||||||| ||||||||||    
T  32505648 agaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgtcacctaagggtgtctatgtatcattact 32505747  T
Q  128 ct 129  Q
    ||    
T  32505748 ct 32505749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 21 - 128
Target Start/End: Original strand, 17819997 - 17820104
Alignment:
Q  21 atgaaagagaaagtgtgattgtatgggatccacatgatcacgtgtcagatttttgtgtaggtgtcaatggatgtattaccacctaaggatgtctatatat 120  Q
    |||||||||||| |||| |||| |||| ||||| | | ||| |||||||||||||||| |||||||| || |||||| |||||||  | ||||||| |||    
T  17819997 atgaaagagaaaatgtgtttgtgtggggtccacgtaaccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctatagttgtctatgtat 17820096  T
Q  121 cattactc 128  Q
    ||| ||||    
T  17820097 cataactc 17820104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 23 - 140
Target Start/End: Original strand, 26891499 - 26891616
Alignment:
Q  23 gaaagagaaagtgtgattgtatgggatccacatgatcacgtgtcagatttttgtgtaggtgtcaatggatgtattaccacctaaggatgtctatatatca 122  Q
    |||||||||| |||| ||||  | | ||||| ||| ||| |||||||||||||||| |||||| | || |||||| |||||||||| || |||| |||||    
T  26891499 gaaagagaaaatgtgcttgttcgaggtccacgtgaccacatgtcagatttttgtgtgggtgtctaggggtgtattgccacctaagggtggctatgtatca 26891598  T
Q  123 ttactcttacttaatata 140  Q
    | |||||| ||| |||||    
T  26891599 taactctttctttatata 26891616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 23 - 128
Target Start/End: Complemental strand, 38732459 - 38732354
Alignment:
Q  23 gaaagagaaagtgtgattgtatgggatccacatgatcacgtgtcagatttttgtgtaggtgtcaatggatgtattaccacctaaggatgtctatatatca 122  Q
    ||||||||||||||  ||||  ||| |||| |||| ||| |||||||||||||||| |||||||| |||||||||  ||| ||||| ||| ||| |||||    
T  38732459 gaaagagaaagtgtacttgtgcggggtccatatgaccacatgtcagatttttgtgtgggtgtcaagggatgtattgtcacataagggtgtttatgtatca 38732360  T
Q  123 ttactc 128  Q
    | ||||    
T  38732359 taactc 38732354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 60 - 128
Target Start/End: Original strand, 28381687 - 28381755
Alignment:
Q  60 acgtgtcagatttttgtgtaggtgtcaatggatgtattaccacctaaggatgtctatatatcattactc 128  Q
    ||||||||||||||||||| |||||| |  | |||||| |||||||||| ||||||| |||||||||||    
T  28381687 acgtgtcagatttttgtgtgggtgtcgaaaggtgtattgccacctaagggtgtctatgtatcattactc 28381755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 60 - 130
Target Start/End: Original strand, 38273174 - 38273244
Alignment:
Q  60 acgtgtcagatttttgtgtaggtgtcaatggatgtattaccacctaaggatgtctatatatcattactctt 130  Q
    ||||||||||||||||||| ||||| || || |||||| ||| ||||| |||||||| |||||| ||||||    
T  38273174 acgtgtcagatttttgtgtgggtgttaaagggtgtattgccatctaagaatgtctatgtatcataactctt 38273244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 60 - 130
Target Start/End: Original strand, 38882846 - 38882915
Alignment:
Q  60 acgtgtcagatttttgtgtaggtgtcaatggatgtattaccacctaaggatgtctatatatcattactctt 130  Q
    ||||||||||||||||||| | |||||| || | |||| |||||||||| ||||||| |||||||||||||    
T  38882846 acgtgtcagatttttgtgtggatgtcaaagggt-tattgccacctaagggtgtctatgtatcattactctt 38882915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 23 - 108
Target Start/End: Original strand, 2997482 - 2997567
Alignment:
Q  23 gaaagagaaagtgtgattgtatgggatccacatgatcacgtgtcagatttttgtgtaggtgtcaatggatgtattaccacctaagg 108  Q
    ||||||||||||||  ||||  ||| |||| |||  ||| |||||||||||||||| |||||||| || |||||| ||||||||||    
T  2997482 gaaagagaaagtgtacttgtgcggggtccatatggccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaagg 2997567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 60 - 128
Target Start/End: Complemental strand, 4060753 - 4060685
Alignment:
Q  60 acgtgtcagatttttgtgtaggtgtcaatggatgtattaccacctaaggatgtctatatatcattactc 128  Q
    ||||||||||||||||||| | ||||||  | ||||||  ||||||||| ||||||| |||||||||||    
T  4060753 acgtgtcagatttttgtgtggatgtcaaaaggtgtattgtcacctaagggtgtctatgtatcattactc 4060685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 59 - 129
Target Start/End: Complemental strand, 36168905 - 36168835
Alignment:
Q  59 cacgtgtcagatttttgtgtaggtgtcaatggatgtattaccacctaaggatgtctatatatcattactct 129  Q
    ||||||||| |||||||||| || || || |||||||||  || |||||||||||||| |||||| |||||    
T  36168905 cacgtgtcaaatttttgtgtgggagttaaaggatgtattgtcatctaaggatgtctatgtatcataactct 36168835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 23 - 108
Target Start/End: Complemental strand, 13365458 - 13365373
Alignment:
Q  23 gaaagagaaagtgtgattgtatgggatccacatgatcacgtgtcagatttttgtgtaggtgtcaatggatgtattaccacctaagg 108  Q
    ||||||||||||||  ||||  ||| |||| ||| |||| |||||||||||||||| |||||||| || | |||| ||| ||||||    
T  13365458 gaaagagaaagtgtacttgtgcggggtccatatggtcacatgtcagatttttgtgtgggtgtcaaggggtatattgccatctaagg 13365373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 63 - 128
Target Start/End: Complemental strand, 43490186 - 43490121
Alignment:
Q  63 tgtcagatttttgtgtaggtgtcaatggatgtattaccacctaaggatgtctatatatcattactc 128  Q
    |||||||||||||||| |||||||| || ||||||  ||||||||| ||| ||| |||||| ||||    
T  43490186 tgtcagatttttgtgtgggtgtcaaggggtgtattgtcacctaagggtgtttatgtatcataactc 43490121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 23 - 115
Target Start/End: Complemental strand, 3440084 - 3439992
Alignment:
Q  23 gaaagagaaagtgtgattgtatgggatccacatgatcacgtgtcagatttttgtgtaggtgtcaatggatgtattaccacctaaggatgtcta 115  Q
    |||||||||| |||| ||||  ||| ||||| | ||||| ||| |||||||||||| |||||| | |  |||||| |||||||||| ||||||    
T  3440084 gaaagagaaaatgtgcttgtgcggggtccacgtaatcacatgttagatttttgtgtgggtgtccaggagtgtattgccacctaagggtgtcta 3439992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 57; Significance: 1e-23; HSPs: 29)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 24 - 128
Target Start/End: Original strand, 27564731 - 27564835
Alignment:
Q  24 aaagagaaagtgtgattgtatgggatccacatgatcacgtgtcagatttttgtgtaggtgtcaatggatgtattaccacctaaggatgtctatatatcat 123  Q
    |||||||||||||| ||||  ||| ||||| |||| ||||||||||||||||||| ||||||||  | |||||| |||||||||||||||||| ||||||    
T  27564731 aaagagaaagtgtgcttgtgcggggtccacgtgattacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccacctaaggatgtctatgtatcat 27564830  T
Q  124 tactc 128  Q
    |||||    
T  27564831 tactc 27564835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 24 - 128
Target Start/End: Original strand, 47452316 - 47452420
Alignment:
Q  24 aaagagaaagtgtgattgtatgggatccacatgatcacgtgtcagatttttgtgtaggtgtcaatggatgtattaccacctaaggatgtctatatatcat 123  Q
    |||||||||||||| ||||  ||||||||| |||  |||||| |||||||||||| |||||||| || ||||||||||||||||| ||||||| ||||||    
T  47452316 aaagagaaagtgtgcttgtgcgggatccacgtgactacgtgttagatttttgtgtgggtgtcaaagggtgtattaccacctaagggtgtctatgtatcat 47452415  T
Q  124 tactc 128  Q
    |||||    
T  47452416 tactc 47452420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 14 - 128
Target Start/End: Original strand, 3302519 - 3302633
Alignment:
Q  14 agatgaaatgaaagagaaagtgtgattgtatgggatccacatgatcacgtgtcagatttttgtgtaggtgtcaatggatgtattaccacctaaggatgtc 113  Q
    |||||| |||||| |||||||||| ||||||||| |||| ||||| ||||||||||||||||||| |||||| | | || ||||  |||||||||||||     
T  3302519 agatgagatgaaaaagaaagtgtgcttgtatggggtccatatgattacgtgtcagatttttgtgtgggtgtccaggaatatattgtcacctaaggatgta 3302618  T
Q  114 tatatatcattactc 128  Q
    ||| |||||||||||    
T  3302619 tatgtatcattactc 3302633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 23 - 129
Target Start/End: Original strand, 51898678 - 51898784
Alignment:
Q  23 gaaagagaaagtgtgattgtatgggatccacatgatcacgtgtcagatttttgtgtaggtgtcaatggatgtattaccacctaaggatgtctatatatca 122  Q
    |||| |||||||||| ||||  ||||||||| |||  ||||||||||||||||||| |||||||| || |||||| |||||||| ||||||||| |||||    
T  51898678 gaaatagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaaagatgtctatgtatca 51898777  T
Q  123 ttactct 129  Q
    |||||||    
T  51898778 ttactct 51898784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 24 - 128
Target Start/End: Complemental strand, 3000423 - 3000319
Alignment:
Q  24 aaagagaaagtgtgattgtatgggatccacatgatcacgtgtcagatttttgtgtaggtgtcaatggatgtattaccacctaaggatgtctatatatcat 123  Q
    |||||||||||||| ||||| ||| ||||| |||  ||||||||||||||||||| |||||||| || |||||| |||||||||| ||| ||| ||||||    
T  3000423 aaagagaaagtgtgcttgtacggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtttatgtatcat 3000324  T
Q  124 tactc 128  Q
    |||||    
T  3000323 tactc 3000319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 24 - 128
Target Start/End: Original strand, 9474872 - 9474976
Alignment:
Q  24 aaagagaaagtgtgattgtatgggatccacatgatcacgtgtcagatttttgtgtaggtgtcaatggatgtattaccacctaaggatgtctatatatcat 123  Q
    |||||||||||||| ||||  ||| ||||| |||  ||||||||||||||||||| |||||||| || |||||| |||||||||| ||||||| ||||||    
T  9474872 aaagagaaagtgtgtttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcat 9474971  T
Q  124 tactc 128  Q
    |||||    
T  9474972 tactc 9474976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 28 - 130
Target Start/End: Complemental strand, 2582015 - 2581913
Alignment:
Q  28 agaaagtgtgattgtatgggatccacatgatcacgtgtcagatttttgtgtaggtgtcaatggatgtattaccacctaaggatgtctatatatcattact 127  Q
    |||||||||| ||||  ||| ||||| |||  ||||||||||||||||||| |||||||| || |||||| |||||||||| ||||||| ||||||||||    
T  2582015 agaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattact 2581916  T
Q  128 ctt 130  Q
    |||    
T  2581915 ctt 2581913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 24 - 130
Target Start/End: Complemental strand, 32813351 - 32813245
Alignment:
Q  24 aaagagaaagtgtgattgtatgggatccacatgatcacgtgtcagatttttgtgtaggtgtcaatggatgtattaccacctaaggatgtctatatatcat 123  Q
    |||||||||||||| ||||  ||| ||||  ||| |||||||||||||||||||| ||||| || || |||||| |||||||||||||||||| ||||||    
T  32813351 aaagagaaagtgtgcttgtgcggggtccatgtgaccacgtgtcagatttttgtgtgggtgttaaagggtgtattgccacctaaggatgtctatgtatcat 32813252  T
Q  124 tactctt 130  Q
     ||||||    
T  32813251 aactctt 32813245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 24 - 130
Target Start/End: Complemental strand, 38595258 - 38595152
Alignment:
Q  24 aaagagaaagtgtgattgtatgggatccacatgatcacgtgtcagatttttgtgtaggtgtcaatggatgtattaccacctaaggatgtctatatatcat 123  Q
    |||||||||||||| ||||| ||| ||||| |||  ||||||||||||||||||| |||||||| || |||||| |||||||| | ||| ||| ||||||    
T  38595258 aaagagaaagtgtgcttgtacggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaaaggtgtttatgtatcat 38595159  T
Q  124 tactctt 130  Q
    |||||||    
T  38595158 tactctt 38595152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 24 - 129
Target Start/End: Complemental strand, 50630562 - 50630457
Alignment:
Q  24 aaagagaaagtgtgattgtatgggatccacatgatcacgtgtcagatttttgtgtaggtgtcaatggatgtattaccacctaaggatgtctatatatcat 123  Q
    |||||||||||||| ||||  ||| ||||| |||  ||||||||||||||||||| |||  ||| ||||||||| |||||||||| | ||||| ||||||    
T  50630562 aaagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtaacaaaggatgtattgccacctaagggtatctatgtatcat 50630463  T
Q  124 tactct 129  Q
    ||||||    
T  50630462 tactct 50630457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 24 - 128
Target Start/End: Complemental strand, 37649302 - 37649198
Alignment:
Q  24 aaagagaaagtgtgattgtatgggatccacatgatcacgtgtcagatttttgtgtaggtgtcaatggatgtattaccacctaaggatgtctatatatcat 123  Q
    |||| ||||||||| ||||  || || ||| ||| |||||||||||||||||||| |||||||| |  |||||| |||||||| ||||||||| ||||||    
T  37649302 aaagggaaagtgtgcttgtgcggaattcacgtgaccacgtgtcagatttttgtgtgggtgtcaaagagtgtattgccacctaaagatgtctatgtatcat 37649203  T
Q  124 tactc 128  Q
    |||||    
T  37649202 tactc 37649198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 23 - 128
Target Start/End: Original strand, 41608488 - 41608593
Alignment:
Q  23 gaaagagaaagtgtgattgtatgggatccacatgatcacgtgtcagatttttgtgtaggtgtcaatggatgtattaccacctaaggatgtctatatatca 122  Q
    ||||||||||||||  ||||| ||| |||| |||  ||| ||||||||||||||||  ||||||| || |||||| |||||||||||||| ||| |||||    
T  41608488 gaaagagaaagtgtacttgtacggggtccatatggccacatgtcagatttttgtgtgagtgtcaaggggtgtattgccacctaaggatgtttatgtatca 41608587  T
Q  123 ttactc 128  Q
    | ||||    
T  41608588 taactc 41608593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 24 - 125
Target Start/End: Original strand, 44548372 - 44548473
Alignment:
Q  24 aaagagaaagtgtgattgtatgggatccacatgatcacgtgtcagatttttgtgtaggtgtcaatggatgtattaccacctaaggatgtctatatatcat 123  Q
    |||||||||||||| ||||  ||| ||||| |||  ||||||||||||||||||| ||| ||||  | |||||| |||||||| ||||||||| ||||||    
T  44548372 aaagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtatcaaatggtgtattgccacctaaagatgtctatgtatcat 44548471  T
Q  124 ta 125  Q
    ||    
T  44548472 ta 44548473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 24 - 128
Target Start/End: Complemental strand, 43236 - 43132
Alignment:
Q  24 aaagagaaagtgtgattgtatgggatccacatgatcacgtgtcagatttttgtgtaggtgtcaatggatgtattaccacctaaggatgtctatatatcat 123  Q
    |||||||||||||| ||||  ||  ||||| |||  ||||||||||||||||||| |||||||| |||||||||  | ||||||  ||||||| ||||||    
T  43236 aaagagaaagtgtgcttgtgcggagtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaggatgtattgtctcctaagactgtctatgtatcat 43137  T
Q  124 tactc 128  Q
    |||||    
T  43136 tactc 43132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 24 - 128
Target Start/End: Original strand, 48716278 - 48716382
Alignment:
Q  24 aaagagaaagtgtgattgtatgggatccacatgatcacgtgtcagatttttgtgtaggtgtcaatggatgtattaccacctaaggatgtctatatatcat 123  Q
    ||||| |||||||| ||||  ||| ||||| |||  ||||||||||||||||||| | ||||||  | |||||| |||||||||| ||||||| ||||||    
T  48716278 aaagataaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtggatgtcaaatggtgtattgccacctaagggtgtctatgtatcat 48716377  T
Q  124 tactc 128  Q
    |||||    
T  48716378 tactc 48716382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 24 - 130
Target Start/End: Original strand, 8346384 - 8346490
Alignment:
Q  24 aaagagaaagtgtgattgtatgggatccacatgatcacgtgtcagatttttgtgtaggtgtcaatggatgtattaccacctaaggatgtctatatatcat 123  Q
    |||||||||||||| ||||   || ||||| |||  ||||||||||||||||||| ||||||||  | |||||| |||||||| | || |||| ||||||    
T  8346384 aaagagaaagtgtgcttgtgcagggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaaggtgactatgtatcat 8346483  T
Q  124 tactctt 130  Q
    |||||||    
T  8346484 tactctt 8346490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 24 - 130
Target Start/End: Original strand, 38632317 - 38632423
Alignment:
Q  24 aaagagaaagtgtgattgtatgggatccacatgatcacgtgtcagatttttgtgtaggtgtcaatggatgtattaccacctaaggatgtctatatatcat 123  Q
    ||||| |||||||| ||||  ||| ||||| |||  ||||||||||||||||||| | ||| ||  | |||||| |||||||||| ||||||| ||||||    
T  38632317 aaagaaaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtggatgttaaaaggtgtattgccacctaagggtgtctatgtatcat 38632416  T
Q  124 tactctt 130  Q
    |||||||    
T  38632417 tactctt 38632423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 24 - 129
Target Start/End: Original strand, 37926434 - 37926539
Alignment:
Q  24 aaagagaaagtgtgattgtatgggatccacatgatcacgtgtcagatttttgtgtaggtgtcaatggatgtattaccacctaaggatgtctatatatcat 123  Q
    |||||||||||||  ||||| ||||||||  ||  |||||||||||||||| ||| ||||| ||  |||||||| |||||||| ||| ||||| ||||||    
T  37926434 aaagagaaagtgtacttgtacgggatccatgtggccacgtgtcagatttttatgtgggtgttaaaagatgtattgccacctaaagatatctatgtatcat 37926533  T
Q  124 tactct 129  Q
     |||||    
T  37926534 aactct 37926539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 14 - 123
Target Start/End: Complemental strand, 44454093 - 44453984
Alignment:
Q  14 agatgaaatgaaagagaaagtgtgattgtatgggatccacatgatcacgtgtcagatttttgtgtaggtgtcaatggatgtattaccacctaaggatgtc 113  Q
    |||||| | |||||| |||||||| |||| |||||||||| | | ||| |||||||||||||||| ||| ||||  |||||||| |||| ||| | ||||    
T  44454093 agatgagaggaaagaaaaagtgtgcttgtgtgggatccacgtaaccacatgtcagatttttgtgtgggtatcaagagatgtattgccacttaaaggtgtc 44453994  T
Q  114 tatatatcat 123  Q
    ||| ||||||    
T  44453993 tatgtatcat 44453984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 23 - 128
Target Start/End: Original strand, 50590995 - 50591100
Alignment:
Q  23 gaaagagaaagtgtgattgtatgggatccacatgatcacgtgtcagatttttgtgtaggtgtcaatggatgtattaccacctaaggatgtctatatatca 122  Q
    ||||||||||||||  ||||  ||| |||| |||  ||| |||||||||||||||| |||||||| || |||||| |||||||||| ||| ||| |||||    
T  50590995 gaaagagaaagtgtacttgtgcggggtccatatggccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaagggtgtttatgtatca 50591094  T
Q  123 ttactc 128  Q
    | ||||    
T  50591095 taactc 50591100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 23 - 130
Target Start/End: Original strand, 5958995 - 5959102
Alignment:
Q  23 gaaagagaaagtgtgattgtatgggatccacatgatcacgtgtcagatttttgtgtaggtgtcaatggatgtattaccacctaaggatgtctatatatca 122  Q
    ||||||||||||||  ||||  ||| |||| |||| ||| |||||||||||||||| ||||||||  | |||||| |||| ||||| ||| ||| |||||    
T  5958995 gaaagagaaagtgtacttgtgcggggtccatatgaccacatgtcagatttttgtgtgggtgtcaagaggtgtattgccacttaagggtgtttatgtatca 5959094  T
Q  123 ttactctt 130  Q
    | ||||||    
T  5959095 taactctt 5959102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 59 - 130
Target Start/End: Original strand, 23597122 - 23597193
Alignment:
Q  59 cacgtgtcagatttttgtgtaggtgtcaatggatgtattaccacctaaggatgtctatatatcattactctt 130  Q
    |||||||||||||||| ||| ||| |||| |  |||||| |||||||| ||||||||| |||||||||||||    
T  23597122 cacgtgtcagatttttatgtgggtatcaaagagtgtattgccacctaatgatgtctatgtatcattactctt 23597193  T

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Target: chr1; HSP #23
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 60 - 131
Target Start/End: Original strand, 49811559 - 49811630
Alignment:
Q  60 acgtgtcagatttttgtgtaggtgtcaatggatgtattaccacctaaggatgtctatatatcattactctta 131  Q
    ||||||||||||||||||| | ||||||  | ||||||  ||||||||||||||||| |||||| |||||||    
T  49811559 acgtgtcagatttttgtgtggatgtcaaatggtgtattgtcacctaaggatgtctatctatcataactctta 49811630  T

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Target: chr1; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 59 - 129
Target Start/End: Complemental strand, 7740802 - 7740732
Alignment:
Q  59 cacgtgtcagatttttgtgtaggtgtcaatggatgtattaccacctaaggatgtctatatatcattactct 129  Q
    ||||||||| |||||| ||||||||||||||||||||||  ||| ||||| |||| || |||||| |||||    
T  7740802 cacgtgtcatatttttatgtaggtgtcaatggatgtattgtcacataaggttgtcaatgtatcataactct 7740732  T

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Target: chr1; HSP #25
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 24 - 121
Target Start/End: Complemental strand, 26440838 - 26440741
Alignment:
Q  24 aaagagaaagtgtgattgtatgggatccacatgatcacgtgtcagatttttgtgtaggtgtcaatggatgtattaccacctaaggatgtctatatatc 121  Q
    |||||||||||||| || |  ||||||||  ||  |||||||||||||||||||| ||||| || || ||||||  || |||||||||||||| ||||    
T  26440838 aaagagaaagtgtgcttatgcgggatccatgtggccacgtgtcagatttttgtgtgggtgttaaagggtgtattgtcatctaaggatgtctatctatc 26440741  T

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Target: chr1; HSP #26
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 24 - 129
Target Start/End: Complemental strand, 41758909 - 41758804
Alignment:
Q  24 aaagagaaagtgtgattgtatgggatccacatgatcacgtgtcagatttttgtgtaggtgtcaatggatgtattaccacctaaggatgtctatatatcat 123  Q
    |||||||||||||| ||||  ||| ||||  |||  ||||||||||||||||||| | |||||| || |||||| |||  ||| | ||||||| ||||||    
T  41758909 aaagagaaagtgtgtttgtgcggggtccatgtgactacgtgtcagatttttgtgtggttgtcaaagggtgtattgccatttaatggtgtctatgtatcat 41758810  T
Q  124 tactct 129  Q
    ||||||    
T  41758809 tactct 41758804  T

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Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 24 - 97
Target Start/End: Complemental strand, 13414865 - 13414792
Alignment:
Q  24 aaagagaaagtgtgattgtatgggatccacatgatcacgtgtcagatttttgtgtaggtgtcaatggatgtatt 97  Q
    ||||||||| |||| |||| |||| ||||| |||  |||||| |||||||||||| |||||||| || ||||||    
T  13414865 aaagagaaaatgtgcttgtgtggggtccacgtgactacgtgttagatttttgtgtgggtgtcaaagggtgtatt 13414792  T

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Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 62 - 131
Target Start/End: Complemental strand, 26274498 - 26274429
Alignment:
Q  62 gtgtcagatttttgtgtaggtgtcaatggatgtattaccacctaaggatgtctatatatcattactctta 131  Q
    ||||||||||||| ||| | ||||||  |||||||| |||| ||||| ||||||| |||||||| |||||    
T  26274498 gtgtcagatttttctgtggatgtcaaatgatgtattgccacataagggtgtctatgtatcattattctta 26274429  T

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Target: chr1; HSP #29
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 23 - 127
Target Start/End: Original strand, 11152373 - 11152476
Alignment:
Q  23 gaaagagaaagtgtgattgtatgggatccacatgatcacgtgtcagatttttgtgtaggtgtcaatggatgtattaccacctaaggatgtctatatatca 122  Q
    |||| |||||| ||| ||||  ||| || ||||||  ||||||||||||||||||| | |||| | || |||||| |||||||||| ||||||| | |||    
T  11152373 gaaaaagaaagcgtgcttgtgcggggtctacatgactacgtgtcagatttttgtgtggatgtcgaagggtgtattgccacctaagg-tgtctatgtttca 11152471  T
Q  123 ttact 127  Q
    |||||    
T  11152472 ttact 11152476  T

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Target: scaffold0321 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 1)
Name: scaffold0321
Description:

Target: scaffold0321; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 24 - 130
Target Start/End: Original strand, 10105 - 10211
Alignment:
Q  24 aaagagaaagtgtgattgtatgggatccacatgatcacgtgtcagatttttgtgtaggtgtcaatggatgtattaccacctaaggatgtctatatatcat 123  Q
    |||||||||||||| ||||| | | ||||| |||  ||||||||||||||| ||| | |||||| ||||||||| |||||||| | ||||||| ||||||    
T  10105 aaagagaaagtgtgcttgtacgcggtccacgtgactacgtgtcagatttttatgtggatgtcaaaggatgtattgccacctaaaggtgtctatgtatcat 10204  T
Q  124 tactctt 130  Q
     ||||||    
T  10205 aactctt 10211  T

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Target: scaffold1268 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold1268
Description:

Target: scaffold1268; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 23 - 128
Target Start/End: Original strand, 924 - 1029
Alignment:
Q  23 gaaagagaaagtgtgattgtatgggatccacatgatcacgtgtcagatttttgtgtaggtgtcaatggatgtattaccacctaaggatgtctatatatca 122  Q
    ||||||||||||||| ||||  ||||| ||| |||  ||||||||| ||||||||| | ||| || || |||||| |||||||| ||||||||| |||||    
T  924 gaaagagaaagtgtgcttgtgcgggattcacgtgactacgtgtcagttttttgtgtggatgttaaagggtgtattgccacctaaagatgtctatgtatca 1023  T
Q  123 ttactc 128  Q
    ||||||    
T  1024 ttactc 1029  T

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Target: scaffold1267 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold1267
Description:

Target: scaffold1267; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 23 - 128
Target Start/End: Original strand, 924 - 1029
Alignment:
Q  23 gaaagagaaagtgtgattgtatgggatccacatgatcacgtgtcagatttttgtgtaggtgtcaatggatgtattaccacctaaggatgtctatatatca 122  Q
    ||||||||||||||| ||||  ||||| ||| |||  ||||||||| ||||||||| | ||| || || |||||| |||||||| ||||||||| |||||    
T  924 gaaagagaaagtgtgcttgtgcgggattcacgtgactacgtgtcagttttttgtgtggatgttaaagggtgtattgccacctaaagatgtctatgtatca 1023  T
Q  123 ttactc 128  Q
    ||||||    
T  1024 ttactc 1029  T

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Target: scaffold0018 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 23 - 108
Target Start/End: Complemental strand, 152603 - 152518
Alignment:
Q  23 gaaagagaaagtgtgattgtatgggatccacatgatcacgtgtcagatttttgtgtaggtgtcaatggatgtattaccacctaagg 108  Q
    ||||||||||||||  ||||  |||||||| |||| ||| |||||||||||||||| |||||||| || |||||| ||||| ||||    
T  152603 gaaagagaaagtgtatttgtgcgggatccatatgaccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacccaagg 152518  T

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Target: scaffold0237 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0237
Description:

Target: scaffold0237; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 24 - 128
Target Start/End: Complemental strand, 4133 - 4029
Alignment:
Q  24 aaagagaaagtgtgattgtatgggatccacatgatcacgtgtcagatttttgtgtaggtgtcaatggatgtattaccacctaaggatgtctatatatcat 123  Q
    |||||||||||||| || |  ||||||||| | |  ||||||||||||||||||| ||||| ||  | |||||| ||| |||| | ||||||| ||||||    
T  4133 aaagagaaagtgtgcttatgcgggatccacgtaactacgtgtcagatttttgtgtgggtgttaaaaggtgtattgccatctaaaggtgtctatgtatcat 4034  T
Q  124 tactc 128  Q
    |||||    
T  4033 tactc 4029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0110 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 23 - 128
Target Start/End: Original strand, 8858 - 8963
Alignment:
Q  23 gaaagagaaagtgtgattgtatgggatccacatgatcacgtgtcagatttttgtgtaggtgtcaatggatgtattaccacctaaggatgtctatatatca 122  Q
    |||||||||| |||  |||| |||| ||||| |||  | |||||| |||||||||||| ||||||    ||||||  ||| |||||||||||||||||||    
T  8858 gaaagagaaaatgtacttgtgtggggtccacgtgactatgtgtcaaatttttgtgtagatgtcaaatagtgtattgtcacttaaggatgtctatatatca 8957  T
Q  123 ttactc 128  Q
    | ||||    
T  8958 taactc 8963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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